Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0004655

Physical Location & Seq

Genomic Coordinates Forward (+)

7020537 .. 7025451

Gene Structure 4915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g06620.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

ATGCTGGTCCCCGGAATTATAGGGTTTCAGGGCTTCCTGCTGCTCCTTATCTTGCTCTCCTTCTTCGTGATTTGTCACAAGTGGAAGAATGCGGCGGCGAAGAAAGAGGAAATCTTGAGGCTTGTGGCTATGGCTTCCGAAGAGACCGCTGTGGCGGAGTTTCAGGCCACGGCTTTTTTCACTCCAGTGGTGCAGCCGGCGTCCTGGCCGTACCATTGTGCCGTCTGCTATGCCAGTACCACAATGCGCTGCTCTAAATGCAAGGCTGTCCGATACTGTTCTGGTAAGTGTCAAATCATCCATTGGAGACAAGGTCACAAGGATGAATGTCAGCCTTCAATCGATTCCATGCGGTTCCAAGACCGGAGTGATTTTGATGGGGACACAGTTTTACATCACGATGGGAAAGGATCACATACTAATTTAACTCCATCCAATACCGTATCATGGGATGACAAATCAAAGAAACCTCTTTCTGATGTTGTTGCTCCTGAACAGCCTAGGAATATGTCATCACCCTCAGAGTGTACTAAGCTGGTGAATCGTCAAGAGGACATATCTTGTGAAAACAAGTTATATAAGATGAAATCGAGTCATACTGATAAAGCGGTTGAGTCTACACAAAAATTTCCTAAAGCAAATGCAAACATATCTGGTGAGGCTCAGTCTGAAAATATTGGCAGTAAGAAGCAGTCTAGAAGAGCTATTTCAACAGAAAAGTTAGTTACTGATGCCTCTAAGTCCAAAAGCTCATCAAGTAATGACAGGGAAGATGAGTCTAAAGAAGATGGATCTCTGTCAAATGGTGCTTCTGTTGATGAGCCATCTTCGACCACTGAAGGGCATCTCGATTCCATTTCTAGGTCTGAAAAAATCGAAGCTTATCATGCATTGCCTGCAAAATTCGGTAGTATCCCAAGCTTGCCCCAAAATTCTAGTAATGGATTGAAAACATCTATGAGGAAAGTTGTGCAGCAGTTTATATCCTCAAAACAGCTGAAGTGCAACCCTTCAGGTCATGGAGATGAGACTGGAAAATACAAGGTATTGTTTCCATATGACCTGTTCGTGAAACTATACTCCAACAACAGTGCTGATCTTTACCCCTTTGGACTCATGAATTGTGGGAACAGCTGCTATGCTAATGCTGTGCTTCAATGTTTAGCATTTACTCGGCCCCTTGTTTCTTATCTTCTTCAAGGGCTCCATTCAAGAGCATTTTTGCTTTTGAAGGCAAGAGAAGGGAAGTCTTTACTGTCCCCCATCAGGATACTATCTAAAATACATAAAATTGGAATTCATCTTGGTCAAGGGAGGGAAGAAGATGCTCATGAATTTTTGAGGTATGCTGTTGATACCATGCAATCTGTTTGCCTCAAGGAAGCTGGGGCTGTTGGTCCTTTGGCTGAAGAAACAACTCTAGTAGGCATGACATTTGGAGGCTATCTCCGATCTAAGATAAAGTGCATGAAGTGCCTTGGAAAATCTGAGCAAATTGAGCGGATGATGGATCTTACAGTTGAAATCGACGGCCAAATTGGAACTCTTGAAGAGGCTCTTGCTCAATTTACGGCTACTGAAACTTTGGACGGGAATAATAGGTACCATTGTAGCAGGTGTAAATCTTATGAGAAAGCCAGAAAGAAATTAACAGTTTTGGAGGCACCAAATATTCTTACAATTGTATTGAAGCGATTTCAGTCTCGTAACTTTGAGAAGCTGAATAAGTCAATACGGTTCCCAGAGGTTCTCAACATGTCCCCGTATATGGATGAAACAAGTGATAAATCCCCTTTGTACAGTCTTTATGCTGTGGTTGTTCACTTGGACATTATGAATGCTGCGTATTCGGGCCATTATGTATGTTATGTAAAGAACAATCAGGGGGAGTGGTTCAAGATTGATGACAGCTCAGTTGAACCTGTGGAATTAAAGAGGGTCTTATCTCAAGGAGCATACATGCTACTTTATGCAAGGCACACCCCACGTCCCCCGGCCTTGCTAGGAAGTACTGCCATTTCTAATGGTGGGAAATCCAAGAGACGGAACTTGGAAGCTGTTCCTGCAAGCCAAACCAAATCCAAGTTGAGATGTAACTCCGCGGTTCCAAGGCCTTACACCAGCAATCAATCGCAAAATCCAGATCCAGGTGATTGGAGATTCCATGCAACGCATAGAATTCCTGCCATAGATTCATCAAGTGAGAGTTCATCCATATTTAGCTCGTCGGATGCAAGTTCTTGTAGCACAGTGAGCACCAAGGAGTCTTCCAGCAACGAAGATTTCTCGGATTACATATTTGGCGAAATGGGACCCAACTGGTACAGTCAATACAGTAGGCATTCGTCCGCTGGGATCACATCTTCATTGTTTCCCAACTTGGATGTAGGTATAAAAGGCCGTAACTTGGAAGGGGAAGGGAATGCCGCAATTTTGTGTAGCGACAGAAGTAGACATCGTAGAAGGTCAACCTCGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

827

Amino Acids

91.59

Weight (kDa)

8.71

Isoelectric Point (pI)

54.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004655)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65450 AT5G65450
fragaria_vesca	FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830
malus_domestica	MD01G1038200.v1.1
prunus_persica	Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1
pyrus_communis	pycom01g06620
rosa_chinensis	RchiOBHm_Chr2g0111521
rosa_laevigata	RLG00000017896
rosa_multiflora	Rmu_co8461347.1_g000001 Rmu_sc0005791.1_g000010
rosa_roxburghii	Rroxscaffold_2G00132250
rosa_rugosa	Rorug02G0174700 Rorug02G0174800 Rorug02G0174900
rosa_samantha	Rh2AG227500 Rh2BG239400 Rh2CG231100 Rh2DG235600
rosa_wichuraiana	Rw2G017570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1605
Acc36I	ACCTGC	1 cut(s)	1605
Acc65I	GGTACC	1 cut(s)	1602
AccB1I	GGYRCC	2 cut(s)	1602, 1663
AccBSI	CCGCTC	1 cut(s)	1501
AccI	GTMKAC	2 cut(s)	617, 2452
AccII	CGCG	1 cut(s)	2102
AclWI	GGATC	5 cut(s)	418, 799, 1518, 2138, 2363
AcoI	YGGCCR	2 cut(s)	206, 1531
AcsI	RAATTY	6 cut(s)	626, 902, 931, 1296, 1334, 2178
AcuI	CTGAAG	4 cut(s)	858, 996, 1019, 1428
AcyI	GRCGYC	1 cut(s)	200
AfaI	GTAC	7 cut(s)	212, 238, 529, 1604, 1799, 2011, 2324
AfiI	CCNNNNNNNGG	8 cut(s)	447, 840, 861, 1266, 1768, 2043, 2147, 2407
AflIII	ACRYGT	1 cut(s)	1755
AjiI	CACGTC	1 cut(s)	1988
AjnI	CCWGG	2 cut(s)	203, 2146
AleI	CACNNNNGTG	1 cut(s)	185
Alw21I	GWGCWC	1 cut(s)	2258
Alw26I	GTCTC	5 cut(s)	137, 301, 1022, 1707, 2035
AlwI	GGATC	5 cut(s)	418, 799, 1518, 2138, 2363
AoxI	GGCC	8 cut(s)	165, 206, 1175, 1531, 1852, 1995, 2111, 2398
ApeKI	GCWGC	6 cut(s)	40, 193, 249, 973, 1134, 1841
ApoI	RAATTY	6 cut(s)	626, 902, 931, 1296, 1334, 2178
Asp700I	GAANNNNTTC	1 cut(s)	2058
Asp718I	GGTACC	1 cut(s)	1602
AspA2I	CCTAGG	1 cut(s)	500
AspLEI	GCGC	1 cut(s)	249
AspS9I	GGNCC	5 cut(s)	7, 1176, 1397, 1852, 2312
AsuC2I	CCSGG	2 cut(s)	12, 1994
AsuHPI	GGTGA	4 cut(s)	507, 550, 668, 2162
AvaII	GGWCC	3 cut(s)	7, 1397, 2312
AvrII	CCTAGG	1 cut(s)	500
BaeI	ACNNNNGTAYC	2 cut(s)	1594, 1627
BanI	GGYRCC	2 cut(s)	1602, 1663
BanII	GRGCYC	1 cut(s)	1206
BbsI	GAAGAC	1 cut(s)	2259
Bbv12I	GWGCWC	1 cut(s)	2258
BbvI	GCAGC	6 cut(s)	27, 205, 236, 985, 1121, 1828
BccI	CCATC	7 cut(s)	371, 395, 439, 782, 832, 1271, 1501
BceAI	ACGGC	6 cut(s)	186, 193, 206, 1546, 1587, 2385
BciT130I	CCWGG	2 cut(s)	205, 2148
BciVI	GTATCC	2 cut(s)	923, 1263
BcnI	CCSGG	2 cut(s)	12, 1994
BcoDI	GTCTC	5 cut(s)	137, 301, 1022, 1707, 2035
BfaI	CTAG	6 cut(s)	501, 696, 861, 936, 1421, 2003
BfuAI	ACCTGC	1 cut(s)	1605
BfuI	GTATCC	2 cut(s)	923, 1263
BisI	GCNGC	9 cut(s)	41, 93, 96, 194, 250, 974, 1135, 1842, 2427
BlnI	CCTAGG	1 cut(s)	500
BlsI	GCNGC	9 cut(s)	42, 94, 97, 195, 251, 975, 1136, 1843, 2428
BmcAI	AGTACT	1 cut(s)	2011
Bme1390I	CCNGG	4 cut(s)	12, 205, 1994, 2148
Bme18I	GGWCC	3 cut(s)	7, 1397, 2312
BmgBI	CACGTC	1 cut(s)	1988
BmgT120I	GGNCC	5 cut(s)	7, 1176, 1397, 1852, 2312
BmrFI	CCNGG	4 cut(s)	12, 205, 1994, 2148
BmsI	GCATC	4 cut(s)	721, 853, 1315, 2221
BpiI	GAAGAC	1 cut(s)	2259
BplI	GAGNNNNNCTC	2 cut(s)	1431, 1463
BpmI	CTGGAG	1 cut(s)	168
BpuEI	CTTGAG	3 cut(s)	136, 1361, 1932
BpuMI	CCSGG	2 cut(s)	12, 1994
Bsa29I	ATCGAT	1 cut(s)	342
BsaHI	GRCGYC	1 cut(s)	200
BsaI	GGTCTC	1 cut(s)	137
BsaJI	CCNNGG	9 cut(s)	10, 168, 500, 1477, 1992, 2100, 2108, 2259, 2472
BsaWI	WCCGGW	1 cut(s)	363
BsaXI	ACNNNNNCTCC	2 cut(s)	298, 328
Bsc4I	CCNNNNNNNGG	8 cut(s)	447, 840, 861, 1266, 1768, 2043, 2147, 2407
Bse118I	RCCGGY	1 cut(s)	196
Bse1I	ACTGG	4 cut(s)	185, 234, 1036, 2324
Bse3DI	GCAATG	1 cut(s)	890
BseBI	CCWGG	2 cut(s)	205, 2148
BseCI	ATCGAT	1 cut(s)	342
BseDI	CCNNGG	9 cut(s)	10, 168, 500, 1477, 1992, 2100, 2108, 2259, 2472
BseGI	GGATG	9 cut(s)	297, 328, 431, 457, 1509, 1777, 2210, 2236, 2389
BseLI	CCNNNNNNNGG	8 cut(s)	447, 840, 861, 1266, 1768, 2043, 2147, 2407
BseMI	GCAATG	1 cut(s)	890
BseMII	CTCAG	4 cut(s)	534, 677, 1479, 1926
BseNI	ACTGG	4 cut(s)	185, 234, 1036, 2324
BseXI	GCAGC	6 cut(s)	27, 205, 236, 985, 1121, 1828
BseYI	CCCAGC	2 cut(s)	1385, 2351
BsgI	GTGCAG	2 cut(s)	212, 992
Bsh1236I	CGCG	1 cut(s)	2102
BshFI	GGCC	8 cut(s)	167, 208, 1177, 1533, 1854, 1997, 2113, 2400
BshNI	GGYRCC	2 cut(s)	1602, 1663
BshVI	ATCGAT	1 cut(s)	342
BsiHKAI	GWGCWC	1 cut(s)	2258
BsiSI	CCGG	4 cut(s)	12, 197, 364, 1994
BslFI	GGGAC	5 cut(s)	395, 1243, 1744, 1974, 2325
BslI	CCNNNNNNNGG	8 cut(s)	447, 840, 861, 1266, 1768, 2043, 2147, 2407
BsmAI	GTCTC	5 cut(s)	137, 301, 1022, 1707, 2035
BsmBI	CGTCTC	1 cut(s)	2035
BsmFI	GGGAC	5 cut(s)	395, 1243, 1744, 1974, 2325
BsmI	GAATGC	4 cut(s)	94, 1843, 2341, 2428
BsnI	GGCC	8 cut(s)	167, 208, 1177, 1533, 1854, 1997, 2113, 2400
Bso31I	GGTCTC	1 cut(s)	137
Bsp1286I	GDGCHC	2 cut(s)	1206, 2258
Bsp1407I	TGTACA	1 cut(s)	1797
Bsp143I	GATC	7 cut(s)	410, 791, 1096, 1451, 1510, 2143, 2355
BspANI	GGCC	8 cut(s)	167, 208, 1177, 1533, 1854, 1997, 2113, 2400
BspCNI	CTCAG	4 cut(s)	533, 676, 1480, 1925
BspDI	ATCGAT	1 cut(s)	342
BspFNI	CGCG	1 cut(s)	2102
BspHI	TCATGA	2 cut(s)	1116, 1330
BspMI	ACCTGC	1 cut(s)	1605
BspPI	GGATC	5 cut(s)	418, 799, 1518, 2138, 2363
BspQI	GCTCTTC	1 cut(s)	694
BspT107I	GGYRCC	2 cut(s)	1602, 1663
BspTNI	GGTCTC	1 cut(s)	137
BsrBI	CCGCTC	1 cut(s)	1501
BsrDI	GCAATG	1 cut(s)	890
BsrFI	RCCGGY	1 cut(s)	196
BsrGI	TGTACA	1 cut(s)	1797
BsrI	ACTGG	4 cut(s)	185, 234, 1036, 2324
BssAI	RCCGGY	1 cut(s)	196
BssECI	CCNNGG	9 cut(s)	10, 168, 500, 1477, 1992, 2100, 2108, 2259, 2472
BssMI	GATC	7 cut(s)	410, 791, 1096, 1451, 1510, 2143, 2355
BssNI	GRCGYC	1 cut(s)	200
BssT1I	CCWWGG	4 cut(s)	500, 1477, 2108, 2259
Bst2UI	CCWGG	2 cut(s)	205, 2148
Bst6I	CTCTTC	3 cut(s)	135, 694, 1545
BstACI	GRCGYC	1 cut(s)	200
BstAPI	GCANNNNNTGC	2 cut(s)	896, 1473
BstAUI	TGTACA	1 cut(s)	1797
BstC8I	GCNNGC	4 cut(s)	198, 897, 923, 2068
BstDEI	CTNAG	7 cut(s)	520, 531, 663, 738, 1455, 1488, 1912
BstDSI	CCRYGG	2 cut(s)	168, 2100
BstF5I	GGATG	9 cut(s)	297, 328, 431, 457, 1509, 1777, 2210, 2236, 2389
BstFNI	CGCG	1 cut(s)	2102
BstHHI	GCGC	1 cut(s)	249
BstKTI	GATC	7 cut(s)	413, 794, 1099, 1454, 1513, 2146, 2358
BstMAI	GTCTC	5 cut(s)	137, 301, 1022, 1707, 2035
BstMBI	GATC	7 cut(s)	410, 791, 1096, 1451, 1510, 2143, 2355
BstMWI	GCNNNNNNNGC	7 cut(s)	258, 887, 896, 1473, 1498, 2063, 2253
BstNI	CCWGG	2 cut(s)	205, 2148
BstNSI	RCATGY	2 cut(s)	1759, 1963
BstSCI	CCNGG	4 cut(s)	10, 203, 1992, 2146
BstUI	CGCG	1 cut(s)	2102
BstV1I	GCAGC	6 cut(s)	27, 205, 236, 985, 1121, 1828
BstV2I	GAAGAC	1 cut(s)	2259
BstX2I	RGATCY	3 cut(s)	791, 1510, 2143
BstXI	CCANNNNNNTGG	1 cut(s)	2154
BstYI	RGATCY	3 cut(s)	791, 1510, 2143
Bsu15I	ATCGAT	1 cut(s)	342
BsuI	GTATCC	2 cut(s)	923, 1263
BsuRI	GGCC	8 cut(s)	167, 208, 1177, 1533, 1854, 1997, 2113, 2400
BsuTUI	ATCGAT	1 cut(s)	342
BtgI	CCRYGG	2 cut(s)	168, 2100
BtrI	CACGTC	1 cut(s)	1988
BtsCI	GGATG	9 cut(s)	297, 328, 431, 457, 1509, 1777, 2210, 2236, 2389
BtsIMutI	CAGTG	4 cut(s)	192, 834, 1096, 2256
BveI	ACCTGC	1 cut(s)	1605
Cac8I	GCNNGC	4 cut(s)	198, 897, 923, 2068
CciI	TCATGA	2 cut(s)	1116, 1330
CfoI	GCGC	1 cut(s)	249
Cfr10I	RCCGGY	1 cut(s)	196
Cfr13I	GGNCC	5 cut(s)	7, 1176, 1397, 1852, 2312
Cfr42I	CCGCGG	1 cut(s)	2103
ClaI	ATCGAT	1 cut(s)	342
CseI	GACGC	1 cut(s)	189
Csp6I	GTAC	7 cut(s)	211, 237, 528, 1603, 1798, 2010, 2323
CviQI	GTAC	7 cut(s)	211, 237, 528, 1603, 1798, 2010, 2323
DdeI	CTNAG	7 cut(s)	520, 531, 663, 738, 1455, 1488, 1912
DpnI	GATC	7 cut(s)	412, 793, 1098, 1453, 1512, 2145, 2357
DpnII	GATC	7 cut(s)	410, 791, 1096, 1451, 1510, 2143, 2355
EaeI	YGGCCR	2 cut(s)	206, 1531
Eam1104I	CTCTTC	3 cut(s)	135, 694, 1545
EarI	CTCTTC	3 cut(s)	135, 694, 1545
EciI	GGCGGA	1 cut(s)	170
Eco130I	CCWWGG	4 cut(s)	500, 1477, 2108, 2259
Eco147I	AGGCCT	1 cut(s)	2113
Eco24I	GRGCYC	1 cut(s)	1206
Eco31I	GGTCTC	1 cut(s)	137
Eco47I	GGWCC	3 cut(s)	7, 1397, 2312
Eco57I	CTGAAG	4 cut(s)	858, 996, 1019, 1428
EcoO109I	RGGNCCY	1 cut(s)	2312
EcoRI	GAATTC	2 cut(s)	1296, 2178
EcoRII	CCWGG	2 cut(s)	203, 2146
EcoT14I	CCWWGG	4 cut(s)	500, 1477, 2108, 2259
EcoT22I	ATGCAT	1 cut(s)	892
EcoT38I	GRGCYC	1 cut(s)	1206
ErhI	CCWWGG	4 cut(s)	500, 1477, 2108, 2259
Esp3I	CGTCTC	1 cut(s)	2035
FalI	AAGNNNNNCTT	4 cut(s)	1542, 1574, 1925, 1957
FaqI	GGGAC	5 cut(s)	395, 1243, 1744, 1974, 2325
FauNDI	CATATG	1 cut(s)	1057
FblI	GTMKAC	2 cut(s)	617, 2452
Fnu4HI	GCNGC	9 cut(s)	41, 93, 96, 194, 250, 974, 1135, 1842, 2427
FokI	GGATG	9 cut(s)	284, 335, 418, 464, 1516, 1784, 2197, 2243, 2396
FriOI	GRGCYC	1 cut(s)	1206
Fsp4HI	GCNGC	9 cut(s)	41, 93, 96, 194, 250, 974, 1135, 1842, 2427
FspBI	CTAG	6 cut(s)	501, 696, 861, 936, 1421, 2003
GlaI	GCGC	1 cut(s)	248
GluI	GCNGC	9 cut(s)	41, 93, 96, 194, 250, 974, 1135, 1842, 2427
GsaI	CCCAGC	2 cut(s)	1389, 2355
GsuI	CTGGAG	1 cut(s)	168
HaeIII	GGCC	8 cut(s)	167, 208, 1177, 1533, 1854, 1997, 2113, 2400
HapII	CCGG	4 cut(s)	12, 197, 364, 1994
HgaI	GACGC	1 cut(s)	189
HhaI	GCGC	1 cut(s)	249
Hin1I	GRCGYC	1 cut(s)	200
Hin6I	GCGC	1 cut(s)	247
HinP1I	GCGC	1 cut(s)	247
HincII	GTYRAC	1 cut(s)	2469
HindII	GTYRAC	1 cut(s)	2469
HindIII	AAGCTT	2 cut(s)	879, 919
HpaII	CCGG	4 cut(s)	12, 197, 364, 1994
HphI	GGTGA	4 cut(s)	507, 550, 668, 2162
Hpy166II	GTNNAC	5 cut(s)	528, 618, 1822, 2453, 2469
Hpy8I	GTNNAC	5 cut(s)	528, 618, 1822, 2453, 2469
Hpy99I	CGWCG	2 cut(s)	1532, 2230
HpyAV	CCTTC	9 cut(s)	70, 345, 833, 1020, 1225, 1235, 2405, 2411, 2457
HpyCH4IV	ACGT	1 cut(s)	1987
HpyF10VI	GCNNNNNNNGC	7 cut(s)	258, 887, 896, 1473, 1498, 2063, 2253
HpyF3I	CTNAG	7 cut(s)	520, 531, 663, 738, 1455, 1488, 1912
HpySE526I	ACGT	1 cut(s)	1987
Hsp92I	GRCGYC	1 cut(s)	200
HspAI	GCGC	1 cut(s)	247
KflI	GGGWCCC	1 cut(s)	2312
KpnI	GGTACC	1 cut(s)	1606
KroI	GCCGGC	1 cut(s)	196
KroNI	GCCGGC	1 cut(s)	198
KspI	CCGCGG	1 cut(s)	2103
Kzo9I	GATC	7 cut(s)	410, 791, 1096, 1451, 1510, 2143, 2355
LguI	GCTCTTC	1 cut(s)	694
LmnI	GCTCC	4 cut(s)	48, 493, 1209, 1952
Lsp1109I	GCAGC	6 cut(s)	27, 205, 236, 985, 1121, 1828
LweI	GCATC	4 cut(s)	721, 853, 1315, 2221
MaeI	CTAG	6 cut(s)	501, 696, 861, 936, 1421, 2003
MaeII	ACGT	1 cut(s)	1987
MaeIII	GTNAC	6 cut(s)	74, 314, 724, 1706, 2093, 2402
MalI	GATC	7 cut(s)	412, 793, 1098, 1453, 1512, 2145, 2357
MbiI	CCGCTC	1 cut(s)	1501
MboI	GATC	7 cut(s)	410, 791, 1096, 1451, 1510, 2143, 2355
MfeI	CAATTG	1 cut(s)	1680
MflI	RGATCY	3 cut(s)	791, 1510, 2143
MhlI	GDGCHC	2 cut(s)	1206, 2258
MlyI	GAGTC	5 cut(s)	601, 623, 785, 1107, 2273
MmeI	TCCRAC	2 cut(s)	1107, 2208
Mph1103I	ATGCAT	1 cut(s)	892
MroNI	GCCGGC	1 cut(s)	196
MroXI	GAANNNNTTC	1 cut(s)	2058
MseI	TTAA	3 cut(s)	425, 1649, 1931
MslI	CAYNNNNRTG	4 cut(s)	185, 321, 399, 1023
MspA1I	CMGCKG	5 cut(s)	149, 997, 1134, 2102, 2351
MspI	CCGG	4 cut(s)	12, 197, 364, 1994
MspR9I	CCNGG	4 cut(s)	12, 205, 1994, 2148
MunI	CAATTG	1 cut(s)	1680
Mva1269I	GAATGC	4 cut(s)	94, 1843, 2341, 2428
MvaI	CCWGG	2 cut(s)	205, 2148
MvnI	CGCG	1 cut(s)	2102
MwoI	GCNNNNNNNGC	7 cut(s)	258, 887, 896, 1473, 1498, 2063, 2253
NaeI	GCCGGC	1 cut(s)	198
NciI	CCSGG	2 cut(s)	12, 1994
NdeI	CATATG	1 cut(s)	1057
NdeII	GATC	7 cut(s)	410, 791, 1096, 1451, 1510, 2143, 2355
NgoMIV	GCCGGC	1 cut(s)	196
NmeAIII	GCCGAG	1 cut(s)	1153
NmuCI	GTSAC	2 cut(s)	74, 314
NsiI	ATGCAT	1 cut(s)	892
NspI	RCATGY	2 cut(s)	1759, 1963
OliI	CACNNNNGTG	1 cut(s)	185
PagI	TCATGA	2 cut(s)	1116, 1330
PaqCI	CACCTGC	1 cut(s)	1605
PceI	AGGCCT	1 cut(s)	2113
PciI	ACATGT	1 cut(s)	1755
PciSI	GCTCTTC	1 cut(s)	694
PctI	GAATGC	4 cut(s)	94, 1843, 2341, 2428
PdiI	GCCGGC	1 cut(s)	198
PdmI	GAANNNNTTC	1 cut(s)	2058
PfeI	GAWTC	5 cut(s)	344, 541, 851, 2160, 2192
PflFI	GACNNNGTC	1 cut(s)	312
PkrI	GCNGC	9 cut(s)	42, 94, 97, 195, 251, 975, 1136, 1843, 2428
PleI	GAGTC	5 cut(s)	600, 622, 784, 1107, 2272
PpsI	GAGTC	5 cut(s)	600, 622, 784, 1107, 2272
PpuMI	RGGWCCY	1 cut(s)	2312
PscI	ACATGT	1 cut(s)	1755
Psp5II	RGGWCCY	1 cut(s)	2312
Psp6I	CCWGG	2 cut(s)	203, 2146
PspFI	CCCAGC	2 cut(s)	1385, 2351
PspGI	CCWGG	2 cut(s)	203, 2146
PspPI	GGNCC	5 cut(s)	7, 1176, 1397, 1852, 2312
PspPPI	RGGWCCY	1 cut(s)	2312
PsuI	RGATCY	3 cut(s)	791, 1510, 2143
PsyI	GACNNNGTC	1 cut(s)	312
PvuII	CAGCTG	2 cut(s)	997, 1134
RsaI	GTAC	7 cut(s)	212, 238, 529, 1604, 1799, 2011, 2324
RsaNI	GTAC	7 cut(s)	211, 237, 528, 1603, 1798, 2010, 2323
RseI	CAYNNNNRTG	4 cut(s)	185, 321, 399, 1023
SacII	CCGCGG	1 cut(s)	2103
SapI	GCTCTTC	1 cut(s)	694
SaqAI	TTAA	3 cut(s)	425, 1649, 1931
SatI	GCNGC	9 cut(s)	41, 93, 96, 194, 250, 974, 1135, 1842, 2427
Sau3AI	GATC	7 cut(s)	410, 791, 1096, 1451, 1510, 2143, 2355
Sau96I	GGNCC	5 cut(s)	7, 1176, 1397, 1852, 2312
ScaI	AGTACT	1 cut(s)	2011
SchI	GAGTC	5 cut(s)	601, 623, 785, 1107, 2273
ScrFI	CCNGG	4 cut(s)	12, 205, 1994, 2148
SduI	GDGCHC	2 cut(s)	1206, 2258
SfaNI	GCATC	4 cut(s)	721, 853, 1315, 2221
Sfr303I	CCGCGG	1 cut(s)	2103
SgrBI	CCGCGG	1 cut(s)	2103
SinI	GGWCC	3 cut(s)	7, 1397, 2312
SmiMI	CAYNNNNRTG	4 cut(s)	185, 321, 399, 1023
SmlI	CTYRAG	3 cut(s)	115, 1376, 1947
SmoI	CTYRAG	3 cut(s)	115, 1376, 1947
SseBI	AGGCCT	1 cut(s)	2113
SspI	AATATT	2 cut(s)	676, 1672
SspMI	CTAG	6 cut(s)	501, 696, 861, 936, 1421, 2003
StuI	AGGCCT	1 cut(s)	2113
StyD4I	CCNGG	4 cut(s)	10, 203, 1992, 2146
StyI	CCWWGG	4 cut(s)	500, 1477, 2108, 2259
TaiI	ACGT	1 cut(s)	1990
TaqI	TCGA	6 cut(s)	342, 590, 830, 849, 876, 1527
TatI	WGTACW	3 cut(s)	527, 1797, 2009
TauI	GCSGC	3 cut(s)	95, 98, 2429
TfiI	GAWTC	5 cut(s)	344, 541, 851, 2160, 2192
Tru1I	TTAA	3 cut(s)	425, 1649, 1931
Tru9I	TTAA	3 cut(s)	425, 1649, 1931
TscAI	CASTG	4 cut(s)	192, 841, 1096, 2256
TseFI	GTSAC	2 cut(s)	74, 314
TseI	GCWGC	6 cut(s)	40, 193, 249, 973, 1134, 1841
Tsp45I	GTSAC	2 cut(s)	74, 314
TspGWI	ACGGA	1 cut(s)	2059
TspRI	CASTG	4 cut(s)	192, 841, 1096, 2256
Tth111I	GACNNNGTC	1 cut(s)	312
VpaK11BI	GGWCC	3 cut(s)	7, 1397, 2312
XapI	RAATTY	6 cut(s)	626, 902, 931, 1296, 1334, 2178
XbaI	TCTAGA	1 cut(s)	695
XceI	RCATGY	2 cut(s)	1759, 1963
XmaJI	CCTAGG	1 cut(s)	500
XmiI	GTMKAC	2 cut(s)	617, 2452
XmnI	GAANNNNTTC	1 cut(s)	2058
XspI	CTAG	6 cut(s)	501, 696, 861, 936, 1421, 2003
ZrmI	AGTACT	1 cut(s)	2011
Zsp2I	ATGCAT	1 cut(s)	892

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.