Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0004655

Physical Location & Seq

Genomic Coordinates Reverse (-)

24124722 .. 24130807

Gene Structure 6086 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG227500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGACAATCTCTGTTGTTTCAAGAAGTTCATTAACGATGGGTGATGATGATAGAATTAACCCTTATGCAGGTGGAATAGGTGCACATACCAGTGCAACCTCACCCAGTACTATATCATGGGATGCCTTCACTTCATCTGGTACTGGAGCTGACACCTCTTCGGGTGAGATTCTTGATCATGTCAGTGTTGACAGAGCAGAGAAACCTCTTTTTGATGGTACTGCTCCTGATCTACTTGGAAATATGTCAGAGTATACTAATTTGGTAAATTGTCGAGATAACTTTTCACCTGCAAATAAGTTAGTTAAGATGAAATCCAGTCACAATGATAAAGAGGTAGAATCTGAATCAAAATTGGCCAAAGCTAAGATAGACATGTCTGCTGATGCTCAGCCTGCAAATTTTGCTGGTAAAAAGCCAACTAGAAGGGGTACTTCAATAGAAAAGGTAGTTACTGATGCCTTTAAGTCCAAGAGGTTGTCAACTAGTGACAGGGAAGATGAACGTAAAGAGGGACCTTTATCAAATAGTGGTTCTAATGGCCGGCCATCTTCAACCACTGGAGGGTTACTGGATTCCAGTTATAGATCTGAAAAAGTTGACGGTTATCATGCCTTGCCTGCCAAAATTGGTAGTATCCCAAGCTTGCCGCAAAATGCTTGTAATGGTCTGAAGACATCCATGAAGAAAGTTGTGCAGCAGTTTAAATCCTCAAAACAGCTGAAATCCAATCTCTCAGGTCCTGAAAATGGGATTGCTGGAAAGTTCAAGGTAATATTTCCATATGAGCTATTTGTGAAACTGTACTCCTACAACAATGTGGATCTTTGCCCATTTGGCCTGACAAATTGTGGGAACAGCTGTTATGCTAATGCTGTGCTACAGTGTTTAGCATTTACTCAGCCTCTTACTTCGTATCTTCTTCAAGGACTCCATTCTAGAGCATGTCAAAAAAAGGACTGGTGCTTTATATGTGAATTTGAAATTCTGCTCCTGAAGGCAAGGGAAGGGAAGTCATCACTGTCCCCGATTAGGATCTTATCCAGAATACATAAAATTGGAAGCCATCTTGGTCATGGGAAGGAAGAAGATGCTCATGAGTTTTTGAGGTATGCAGTTGATACCATGCAATCTGTTTGCCTCAAGGAAGCTGGGGCTATTGGTCCTTTGGCAGAACAAACAACTCTAGTAGGCATGACCTTTGGAGGTCACCTTCGATCCAAGATAAAGTGCATGAAGTGCCTCGGGAAAACTGAGCAATTTGAGCGGATGATGGATCTTACTGTCGAAATTGATGGGGCAATTGGAACTCTGGAAGAGGCTCTTGCACAATTTACTGCTACTGAAACTTTGGACGGAGATAATAGGTTCCATTGTAACAGGTGTAAATCTTATGAGAAAGCCAGAAAGAAACTTACAGTTCTAGAGGCACCAAATATTCTTACAATAGTGTTGAAGCGATTTCAGTCTCGAAACTTCGAGAAGCTGGATAAGTCAGTACGTTTTCCAGAGGTTCTCAACTTGTCACCATACATGGACAGAACAAGTGATAAATCTCCTTTGTACAATCTTTATGCCGTCGTTGTTCACCTGGATATTATGAATGCTGCATATTCAGGCCATTATATATGTTATGTAAAGAACAGTCAAGGCAACTGGTTCAAGATTAATGACAGCTCGGTTGAACCCGTGGAATTAAAGAGGGTCTTATCTGAAGGCGCATACATGCTTCTTTATGCAAGGCGCTCTCCGCGACCCCCACCCTTGGTAGGAAGTAACGCCCTTTCTCATGCTGGGACATCCAATAGAAGGAACTCGGAAGCAGTCCCTTCAAGCCTTACCAAGTCCAAGTTGAGATACACGGTTCCAAGTATGAATAGTTCTGCAGCACAACCAAAGTCTAGTAGAGAGTGGTACAGGATGAGTTTTGATGGTTCAAGCAATCAATCATTAGATCCAGATGATTGGAGATCTCATTCCATGTACAGAGTTCCTGCTATGGATTCATTAAGTGAGAGTTCATCGATTTTCAGCTCCTCGGATGCAAGTTCTTGTAGCACCGTGAGCACCAAGGACTCTTCCAGCAATGAAGATCTCTCTGAATACATATTTGGTCAAGTAGGAACAAATCCGTACAGCCAATTCAGGCGTTCATCAGACGTGGTTGCACCTTCCTTGTTTCCAAACTTTGATGTAGATATGAAAGGCCGTACAGAGGACTCAGAAGGCGGAGGAAACTCCACAATTTTGTGTAGTGACAGAAGTAGACATCGCAGGAAGTCAACCTCAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

764

Amino Acids

84.03

Weight (kDa)

8.68

Isoelectric Point (pI)

49.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	279 - 579	1.3e-55	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	280 - 561	1.8e-21	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004655)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65450 AT5G65450
fragaria_vesca	FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830 FvH4_1g19830
malus_domestica	MD01G1038200.v1.1
prunus_persica	Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1 Prupe.6G197100_v2.0.a1
pyrus_communis	pycom01g06620
rosa_chinensis	RchiOBHm_Chr2g0111521
rosa_laevigata	RLG00000017896
rosa_multiflora	Rmu_co8461347.1_g000001 Rmu_sc0005791.1_g000010
rosa_roxburghii	Rroxscaffold_2G00132250
rosa_rugosa	Rorug02G0174700 Rorug02G0174800 Rorug02G0174900
rosa_samantha	Rh2AG227500 Rh2BG239400 Rh2CG231100 Rh2DG235600
rosa_wichuraiana	Rw2G017570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	59, 298
Acc36I	ACCTGC	2 cut(s)	59, 298
AccB1I	GGYRCC	1 cut(s)	1429
AccBSI	CCGCTC	1 cut(s)	1267
AccI	GTMKAC	2 cut(s)	254, 2266
AccII	CGCG	1 cut(s)	1753
AciI	CCGC	4 cut(s)	650, 1267, 1751, 2229
AclWI	GGATC	5 cut(s)	831, 1043, 1212, 1284, 1949
AcoI	YGGCCR	3 cut(s)	357, 541, 545
AcsI	RAATTY	3 cut(s)	400, 977, 984
AcuI	CTGAAG	3 cut(s)	692, 1016, 1734
AfiI	CCNNNNNNNGG	8 cut(s)	68, 564, 749, 1032, 1765, 1769, 1809, 2215
AflIII	ACRYGT	1 cut(s)	375
AhlI	ACTAGT	1 cut(s)	485
AjiI	CACGTC	1 cut(s)	2161
AjnI	CCWGG	1 cut(s)	1590
AjuI	GAANNNNNNNTTGG	2 cut(s)	2094, 2126
Alw21I	GWGCWC	2 cut(s)	85, 2069
Alw26I	GTCTC	1 cut(s)	1473
Alw44I	GTGCAC	1 cut(s)	81
AlwI	GGATC	5 cut(s)	831, 1043, 1212, 1284, 1949
AlwNI	CAGNNNCTG	1 cut(s)	743
Ama87I	CYCGRG	1 cut(s)	1244
AoxI	GGCC	6 cut(s)	357, 541, 545, 838, 1618, 2206
ApaLI	GTGCAC	1 cut(s)	81
ApeKI	GCWGC	3 cut(s)	697, 1607, 1886
ApoI	RAATTY	3 cut(s)	400, 977, 984
AseI	ATTAAT	1 cut(s)	1668
AspLEI	GCGC	2 cut(s)	1721, 1746
AspS9I	GGNCC	3 cut(s)	515, 740, 1163
AsuHPI	GGTGA	7 cut(s)	53, 93, 176, 279, 1202, 1518, 1580
AvaI	CYCGRG	1 cut(s)	1244
AvaII	GGWCC	3 cut(s)	515, 740, 1163
BaeGI	GKGCMC	1 cut(s)	85
BalI	TGGCCA	1 cut(s)	359
BanI	GGYRCC	1 cut(s)	1429
BbsI	GAAGAC	1 cut(s)	680
Bbv12I	GWGCWC	2 cut(s)	85, 2069
BbvI	GCAGC	3 cut(s)	709, 1594, 1898
BccI	CCATC	7 cut(s)	31, 209, 556, 1074, 1267, 1289, 1925
BceAI	ACGGC	2 cut(s)	1562, 2193
BciT130I	CCWGG	1 cut(s)	1592
BciVI	GTATCC	1 cut(s)	647
BclI	TGATCA	1 cut(s)	175
BcoDI	GTCTC	1 cut(s)	1473
BcuI	ACTAGT	1 cut(s)	485
BfaI	CTAG	6 cut(s)	423, 486, 939, 1187, 1424, 1902
BfmI	CTRYAG	2 cut(s)	881, 1884
BfoI	RGCGCY	1 cut(s)	1747
BfuAI	ACCTGC	2 cut(s)	59, 298
BfuI	GTATCC	1 cut(s)	647
BglI	GCCNNNNNGGC	1 cut(s)	837
BglII	AGATCT	3 cut(s)	587, 1970, 2092
BisI	GCNGC	4 cut(s)	650, 698, 1608, 1887
BlpI	GCTNAGC	1 cut(s)	390
BlsI	GCNGC	4 cut(s)	651, 699, 1609, 1888
BmcAI	AGTACT	1 cut(s)	109
Bme1390I	CCNGG	1 cut(s)	1592
Bme18I	GGWCC	3 cut(s)	515, 740, 1163
BmeT110I	CYCGRG	1 cut(s)	1244
BmgBI	CACGTC	1 cut(s)	2161
BmgT120I	GGNCC	3 cut(s)	515, 740, 1163
BmiI	GGNNCC	4 cut(s)	516, 1370, 1431, 1866
BmrFI	CCNGG	1 cut(s)	1592
BmrI	ACTGGG	1 cut(s)	99
BmsI	GCATC	5 cut(s)	112, 376, 448, 1081, 2032
BmuI	ACTGGG	1 cut(s)	99
BpiI	GAAGAC	1 cut(s)	680
BpmI	CTGGAG	2 cut(s)	165, 582
Bpu1102I	GCTNAGC	1 cut(s)	390
BpuEI	CTTGAG	1 cut(s)	1127
Bsa29I	ATCGAT	1 cut(s)	2024
BsaBI	GATNNNNATC	1 cut(s)	1034
BsaJI	CCNNGG	5 cut(s)	1243, 1689, 1764, 2037, 2070
Bsc4I	CCNNNNNNNGG	8 cut(s)	68, 564, 749, 1032, 1765, 1769, 1809, 2215
Bse118I	RCCGGY	1 cut(s)	543
Bse1I	ACTGG	9 cut(s)	90, 105, 148, 318, 565, 576, 579, 965, 1661
Bse3DI	GCAATG	1 cut(s)	2092
Bse8I	GATNNNNATC	1 cut(s)	1034
BseBI	CCWGG	1 cut(s)	1592
BseCI	ATCGAT	1 cut(s)	2024
BseDI	CCNNGG	5 cut(s)	1243, 1689, 1764, 2037, 2070
BseGI	GGATG	6 cut(s)	127, 677, 1275, 1799, 1926, 2047
BseJI	GATNNNNATC	1 cut(s)	1034
BseLI	CCNNNNNNNGG	8 cut(s)	68, 564, 749, 1032, 1765, 1769, 1809, 2215
BseMI	GCAATG	1 cut(s)	2092
BseMII	CTCAG	5 cut(s)	404, 750, 914, 1245, 2235
BseNI	ACTGG	9 cut(s)	90, 105, 148, 318, 565, 576, 579, 965, 1661
BseRI	GAGGAG	1 cut(s)	2026
BseSI	GKGCMC	1 cut(s)	85
BseXI	GCAGC	3 cut(s)	709, 1594, 1898
BseYI	CCCAGC	2 cut(s)	1151, 1793
BsgI	GTGCAG	1 cut(s)	716
Bsh1236I	CGCG	1 cut(s)	1753
BshFI	GGCC	6 cut(s)	359, 543, 547, 840, 1620, 2208
BshNI	GGYRCC	1 cut(s)	1429
BshVI	ATCGAT	1 cut(s)	2024
BsiHKAI	GWGCWC	2 cut(s)	85, 2069
BsiHKCI	CYCGRG	1 cut(s)	1244
BsiSI	CCGG	1 cut(s)	544
BslFI	GGGAC	4 cut(s)	528, 1009, 1810, 1811
BslI	CCNNNNNNNGG	8 cut(s)	68, 564, 749, 1032, 1765, 1769, 1809, 2215
BsmAI	GTCTC	1 cut(s)	1473
BsmFI	GGGAC	4 cut(s)	528, 1009, 1810, 1811
BsmI	GAATGC	1 cut(s)	1609
BsnI	GGCC	6 cut(s)	359, 543, 547, 840, 1620, 2208
BsoBI	CYCGRG	1 cut(s)	1244
Bsp1286I	GDGCHC	2 cut(s)	85, 2069
Bsp1407I	TGTACA	2 cut(s)	1563, 1983
Bsp1720I	GCTNAGC	1 cut(s)	390
BspACI	CCGC	4 cut(s)	650, 1267, 1751, 2229
BspANI	GGCC	6 cut(s)	359, 543, 547, 840, 1620, 2208
BspCNI	CTCAG	5 cut(s)	403, 749, 913, 1246, 2234
BspDI	ATCGAT	1 cut(s)	2024
BspFNI	CGCG	1 cut(s)	1753
BspHI	TCATGA	1 cut(s)	1096
BspLI	GGNNCC	4 cut(s)	516, 1370, 1431, 1866
BspMAI	CTGCAG	1 cut(s)	1888
BspMI	ACCTGC	2 cut(s)	59, 298
BspPI	GGATC	5 cut(s)	831, 1043, 1212, 1284, 1949
BspT107I	GGYRCC	1 cut(s)	1429
BsrBI	CCGCTC	1 cut(s)	1267
BsrDI	GCAATG	1 cut(s)	2092
BsrFI	RCCGGY	1 cut(s)	543
BsrGI	TGTACA	2 cut(s)	1563, 1983
BsrI	ACTGG	9 cut(s)	90, 105, 148, 318, 565, 576, 579, 965, 1661
BssAI	RCCGGY	1 cut(s)	543
BssECI	CCNNGG	5 cut(s)	1243, 1689, 1764, 2037, 2070
BssNAI	GTATAC	1 cut(s)	255
BssT1I	CCWWGG	2 cut(s)	1764, 2070
Bst1107I	GTATAC	1 cut(s)	255
Bst2UI	CCWGG	1 cut(s)	1592
Bst4CI	ACNGT	9 cut(s)	605, 804, 885, 1023, 1285, 1420, 1646, 1864, 2062
Bst6I	CTCTTC	3 cut(s)	163, 1311, 2083
BstAPI	GCANNNNNTGC	2 cut(s)	404, 1239
BstAUI	TGTACA	2 cut(s)	1563, 1983
BstC8I	GCNNGC	4 cut(s)	396, 545, 621, 647
BstDEI	CTNAG	7 cut(s)	366, 390, 736, 900, 1254, 2221, 2287
BstDSI	CCRYGG	1 cut(s)	1689
BstEII	GGTNACC	1 cut(s)	1208
BstENI	CCTNNNNNAGG	1 cut(s)	66
BstF5I	GGATG	6 cut(s)	127, 677, 1275, 1799, 1926, 2047
BstFNI	CGCG	1 cut(s)	1753
BstH2I	RGCGCY	1 cut(s)	1747
BstHHI	GCGC	2 cut(s)	1721, 1746
BstMAI	GTCTC	1 cut(s)	1473
BstMWI	GCNNNNNNNGC	8 cut(s)	395, 404, 620, 837, 1239, 1264, 1750, 2064
BstNI	CCWGG	1 cut(s)	1592
BstNSI	RCATGY	3 cut(s)	379, 948, 1729
BstPI	GGTNACC	1 cut(s)	1208
BstSCI	CCNGG	1 cut(s)	1590
BstSFI	CTRYAG	2 cut(s)	881, 1884
BstSLI	GKGCMC	1 cut(s)	85
BstUI	CGCG	1 cut(s)	1753
BstV1I	GCAGC	3 cut(s)	709, 1594, 1898
BstV2I	GAAGAC	1 cut(s)	680
BstX2I	RGATCY	7 cut(s)	587, 823, 1035, 1276, 1954, 1970, 2092
BstXI	CCANNNNNNTGG	1 cut(s)	1965
BstYI	RGATCY	7 cut(s)	587, 823, 1035, 1276, 1954, 1970, 2092
BstZ17I	GTATAC	1 cut(s)	255
Bsu15I	ATCGAT	1 cut(s)	2024
BsuI	GTATCC	1 cut(s)	647
BsuRI	GGCC	6 cut(s)	359, 543, 547, 840, 1620, 2208
BsuTUI	ATCGAT	1 cut(s)	2024
BtgI	CCRYGG	1 cut(s)	1689
BtgZI	GCGATG	1 cut(s)	2255
BtrI	CACGTC	1 cut(s)	2161
BtsCI	GGATG	6 cut(s)	127, 677, 1275, 1799, 1926, 2047
BtsIMutI	CAGTG	5 cut(s)	97, 190, 558, 890, 1019
BveI	ACCTGC	2 cut(s)	59, 298
Cac8I	GCNNGC	4 cut(s)	396, 545, 621, 647
CaiI	CAGNNNCTG	1 cut(s)	743
CciI	TCATGA	1 cut(s)	1096
CfoI	GCGC	2 cut(s)	1721, 1746
Cfr10I	RCCGGY	1 cut(s)	543
Cfr13I	GGNCC	3 cut(s)	515, 740, 1163
ClaI	ATCGAT	1 cut(s)	2024
DdeI	CTNAG	7 cut(s)	366, 390, 736, 900, 1254, 2221, 2287
DraI	TTTAAA	1 cut(s)	706
EaeI	YGGCCR	3 cut(s)	357, 541, 545
Eam1104I	CTCTTC	3 cut(s)	163, 1311, 2083
EarI	CTCTTC	3 cut(s)	163, 1311, 2083
EciI	GGCGGA	1 cut(s)	2244
Eco130I	CCWWGG	2 cut(s)	1764, 2070
Eco47I	GGWCC	3 cut(s)	515, 740, 1163
Eco57I	CTGAAG	3 cut(s)	692, 1016, 1734
Eco88I	CYCGRG	1 cut(s)	1244
Eco91I	GGTNACC	1 cut(s)	1208
EcoNI	CCTNNNNNAGG	1 cut(s)	66
EcoO109I	RGGNCCY	2 cut(s)	515, 740
EcoO65I	GGTNACC	1 cut(s)	1208
EcoRII	CCWGG	1 cut(s)	1590
EcoT14I	CCWWGG	2 cut(s)	1764, 2070
ErhI	CCWWGG	2 cut(s)	1764, 2070
FalI	AAGNNNNNCTT	6 cut(s)	418, 450, 1308, 1340, 1691, 1723
FaqI	GGGAC	4 cut(s)	528, 1009, 1810, 1811
FauNDI	CATATG	1 cut(s)	784
FbaI	TGATCA	1 cut(s)	175
FblI	GTMKAC	2 cut(s)	254, 2266
Fnu4HI	GCNGC	4 cut(s)	650, 698, 1608, 1887
FokI	GGATG	6 cut(s)	134, 664, 1282, 1786, 1933, 2054
FseI	GGCCGGCC	1 cut(s)	547
Fsp4HI	GCNGC	4 cut(s)	650, 698, 1608, 1887
FspBI	CTAG	6 cut(s)	423, 486, 939, 1187, 1424, 1902
GlaI	GCGC	2 cut(s)	1720, 1745
GluI	GCNGC	4 cut(s)	650, 698, 1608, 1887
GsaI	CCCAGC	2 cut(s)	1155, 1797
GsuI	CTGGAG	2 cut(s)	165, 582
HaeII	RGCGCY	1 cut(s)	1747
HaeIII	GGCC	6 cut(s)	359, 543, 547, 840, 1620, 2208
HapII	CCGG	1 cut(s)	544
HhaI	GCGC	2 cut(s)	1721, 1746
Hin6I	GCGC	2 cut(s)	1719, 1744
HinP1I	GCGC	2 cut(s)	1719, 1744
HincII	GTYRAC	4 cut(s)	190, 483, 601, 2283
HindII	GTYRAC	4 cut(s)	190, 483, 601, 2283
HindIII	AAGCTT	1 cut(s)	643
HinfI	GANTC	8 cut(s)	169, 341, 347, 575, 930, 2003, 2075, 2219
HpaII	CCGG	1 cut(s)	544
HphI	GGTGA	7 cut(s)	53, 93, 176, 279, 1202, 1518, 1580
Hpy166II	GTNNAC	8 cut(s)	83, 190, 255, 483, 601, 1588, 2267, 2283
Hpy8I	GTNNAC	8 cut(s)	83, 190, 255, 483, 601, 1588, 2267, 2283
Hpy99I	CGWCG	1 cut(s)	1583
HpyCH4III	ACNGT	9 cut(s)	605, 804, 885, 1023, 1285, 1420, 1646, 1864, 2062
HpyCH4IV	ACGT	3 cut(s)	505, 1501, 2160
HpyF10VI	GCNNNNNNNGC	8 cut(s)	395, 404, 620, 837, 1239, 1264, 1750, 2064
HpyF3I	CTNAG	7 cut(s)	366, 390, 736, 900, 1254, 2221, 2287
HpySE526I	ACGT	3 cut(s)	505, 1501, 2160
HspAI	GCGC	2 cut(s)	1719, 1744
KroI	GCCGGC	1 cut(s)	543
KroNI	GCCGGC	1 cut(s)	545
Ksp22I	TGATCA	1 cut(s)	175
LmnI	GCTCC	4 cut(s)	146, 229, 996, 2039
Lsp1109I	GCAGC	3 cut(s)	709, 1594, 1898
LweI	GCATC	5 cut(s)	112, 376, 448, 1081, 2032
MaeI	CTAG	6 cut(s)	423, 486, 939, 1187, 1424, 1902
MaeII	ACGT	3 cut(s)	505, 1501, 2160
MaeIII	GTNAC	9 cut(s)	320, 451, 488, 567, 1208, 1376, 1524, 1775, 2255
MbiI	CCGCTC	1 cut(s)	1267
MfeI	CAATTG	1 cut(s)	1302
MflI	RGATCY	7 cut(s)	587, 823, 1035, 1276, 1954, 1970, 2092
MhlI	GDGCHC	2 cut(s)	85, 2069
MlsI	TGGCCA	1 cut(s)	359
MluNI	TGGCCA	1 cut(s)	359
MlyI	GAGTC	3 cut(s)	924, 2069, 2213
Mox20I	TGGCCA	1 cut(s)	359
MroNI	GCCGGC	1 cut(s)	543
MscI	TGGCCA	1 cut(s)	359
MseI	TTAA	9 cut(s)	32, 57, 306, 465, 705, 1668, 1697, 2009, 2293
MslI	CAYNNNNRTG	2 cut(s)	90, 183
Msp20I	TGGCCA	1 cut(s)	359
MspA1I	CMGCKG	2 cut(s)	721, 861
MspI	CCGG	1 cut(s)	544
MspR9I	CCNGG	1 cut(s)	1592
MunI	CAATTG	1 cut(s)	1302
Mva1269I	GAATGC	1 cut(s)	1609
MvaI	CCWGG	1 cut(s)	1592
MvnI	CGCG	1 cut(s)	1753
MwoI	GCNNNNNNNGC	8 cut(s)	395, 404, 620, 837, 1239, 1264, 1750, 2064
NaeI	GCCGGC	1 cut(s)	545
NdeI	CATATG	1 cut(s)	784
NgoMIV	GCCGGC	1 cut(s)	543
NlaIV	GGNNCC	4 cut(s)	516, 1370, 1431, 1866
NmuCI	GTSAC	5 cut(s)	320, 488, 1208, 1524, 2255
NspI	RCATGY	3 cut(s)	379, 948, 1729
PagI	TCATGA	1 cut(s)	1096
PaqCI	CACCTGC	2 cut(s)	59, 298
PciI	ACATGT	1 cut(s)	375
PctI	GAATGC	1 cut(s)	1609
PdiI	GCCGGC	1 cut(s)	545
PfeI	GAWTC	5 cut(s)	169, 341, 347, 575, 2003
PkrI	GCNGC	4 cut(s)	651, 699, 1609, 1888
PleI	GAGTC	3 cut(s)	924, 2069, 2213
PpsI	GAGTC	3 cut(s)	924, 2069, 2213
PpuMI	RGGWCCY	2 cut(s)	515, 740
PscI	ACATGT	1 cut(s)	375
PshBI	ATTAAT	1 cut(s)	1668
Psp5II	RGGWCCY	2 cut(s)	515, 740
Psp6I	CCWGG	1 cut(s)	1590
PspEI	GGTNACC	1 cut(s)	1208
PspFI	CCCAGC	2 cut(s)	1151, 1793
PspGI	CCWGG	1 cut(s)	1590
PspN4I	GGNNCC	4 cut(s)	516, 1370, 1431, 1866
PspPI	GGNCC	3 cut(s)	515, 740, 1163
PspPPI	RGGWCCY	2 cut(s)	515, 740
PsrI	GAACNNNNNNTAC	2 cut(s)	1864, 1896
PstI	CTGCAG	1 cut(s)	1888
PstNI	CAGNNNCTG	1 cut(s)	743
PsuI	RGATCY	7 cut(s)	587, 823, 1035, 1276, 1954, 1970, 2092
PvuII	CAGCTG	2 cut(s)	721, 861
RigI	GGCCGGCC	1 cut(s)	547
RseI	CAYNNNNRTG	2 cut(s)	90, 183
SaqAI	TTAA	9 cut(s)	32, 57, 306, 465, 705, 1668, 1697, 2009, 2293
SatI	GCNGC	4 cut(s)	650, 698, 1608, 1887
Sau96I	GGNCC	3 cut(s)	515, 740, 1163
ScaI	AGTACT	1 cut(s)	109
SchI	GAGTC	3 cut(s)	924, 2069, 2213
ScrFI	CCNGG	1 cut(s)	1592
SduI	GDGCHC	2 cut(s)	85, 2069
SfaNI	GCATC	5 cut(s)	112, 376, 448, 1081, 2032
SfcI	CTRYAG	2 cut(s)	881, 1884
SinI	GGWCC	3 cut(s)	515, 740, 1163
SmiMI	CAYNNNNRTG	2 cut(s)	90, 183
SmlI	CTYRAG	1 cut(s)	1142
SmoI	CTYRAG	1 cut(s)	1142
SpeI	ACTAGT	1 cut(s)	485
SsiI	CCGC	4 cut(s)	650, 1267, 1751, 2229
SspI	AATATT	2 cut(s)	777, 1438
SspMI	CTAG	6 cut(s)	423, 486, 939, 1187, 1424, 1902
StyD4I	CCNGG	1 cut(s)	1590
StyI	CCWWGG	2 cut(s)	1764, 2070
TaaI	ACNGT	9 cut(s)	605, 804, 885, 1023, 1285, 1420, 1646, 1864, 2062
TaiI	ACGT	3 cut(s)	508, 1504, 2163
TaqI	TCGA	6 cut(s)	274, 1216, 1287, 1471, 1479, 2024
TatI	WGTACW	4 cut(s)	107, 804, 1563, 1983
TauI	GCSGC	1 cut(s)	652
TfiI	GAWTC	5 cut(s)	169, 341, 347, 575, 2003
Tru1I	TTAA	9 cut(s)	32, 57, 306, 465, 705, 1668, 1697, 2009, 2293
Tru9I	TTAA	9 cut(s)	32, 57, 306, 465, 705, 1668, 1697, 2009, 2293
TscAI	CASTG	5 cut(s)	97, 190, 565, 890, 1026
TseFI	GTSAC	5 cut(s)	320, 488, 1208, 1524, 2255
TseI	GCWGC	3 cut(s)	697, 1607, 1886
Tsp45I	GTSAC	5 cut(s)	320, 488, 1208, 1524, 2255
TspGWI	ACGGA	2 cut(s)	1371, 2121
TspRI	CASTG	5 cut(s)	97, 190, 565, 890, 1026
VneI	GTGCAC	1 cut(s)	81
VpaK11BI	GGWCC	3 cut(s)	515, 740, 1163
VspI	ATTAAT	1 cut(s)	1668
XagI	CCTNNNNNAGG	1 cut(s)	66
XapI	RAATTY	3 cut(s)	400, 977, 984
XbaI	TCTAGA	2 cut(s)	938, 1423
XceI	RCATGY	3 cut(s)	379, 948, 1729
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1073
XmiI	GTMKAC	2 cut(s)	254, 2266
XspI	CTAG	6 cut(s)	423, 486, 939, 1187, 1424, 1902
ZrmI	AGTACT	1 cut(s)	109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.