FvH4_1g22080

aarF domain-containing protein kinase At1g79600

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0007840
Physical Location & Seq
Reverse (-)
14031962 .. 14043239
11278 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g22080.t3

Sequence Viewer

Length: 2253 bp
ATGGCGTCGTGCTCGCTACCGTTGCCGGAGCTCACCTTTCTCTCGCCGCAGACGACTCCTAAACGCCGGCTTTCTCTCTCTACAGTTTCTATTTCGAGATTGTCGGTTTACAGGCACCCGAGGTTTGGTCTGCGATCGCGAATCAGAGCGGCGAAGGACGACGGGGTGGTGGTGGTGGAGGAGAGGGAGGCGGAGCTGATCAGGAAAGTGAATGGAGTGAGTGGTGATGGATACAGCTCCAATGGCGCGGCGATTAAGTATACGAATGGAAGATTGAGTGAGAATGGGAGCTTGGTGAAGTATGTGAATGGGAATGGGGCGGCGGGGACGGCAGTGGTGGAGGAGGTTGAGGTTTTGAAGGCGGAGGAGGAAGGCAGGCAGAGGAAGATTGAGGAGATTGGGAAGGAAGACGCGTGGTTTAAGAACAGTGGAATGCCGAAAGTTGAGGTCTCTGTTGCACCTGGTGGCCGTTGGAGTAGATTCAAAACTTACTCAACAATTCAGAGGACCTTGGAAATATGGGGATTTGTTGTATCTTTCCTTGTCAAGGCTTGGTGGAACACTAAAAAATTCACATATCGAGGGGGAATGACAGAGGAAAAGAAAACCTTAAGACGTAAGGCCCTTGCCAAGTGGCTAAAGGAGAATATTCTGAGATTGGGTCCAACATTCATCAAAATTGGCCAGCAGTTCTCGACAAGGGTAGACATTCTCGCTCAAGAATATGTTGATCAGTTGTCTGAACTTCAGGATCAAGTTCCTCCTTTCCCATCAGAAACTGCTGTATCAATTGTGGAAGAAGAGCTTGGAGCTCCTGTGAATGAAATCTTTGATCGGTTTGACTATGAACCAATAGCTGCTGCTAGTCTTGGTCAGGTTCACCGTGCAAGGTTGAAGGGAAAGGAAGTTGTTATTAAAGTACAGAGGCCTGGACTCAAGGATCTTTTCAACATTGATCTGAAGAACCTGAGGGTAATTGCAGAATATCTTCAGAAAATTGACCCCAAGTCAGATGGTGCGAAGAGGGATTGGGTTGCTATCTATGATGAGTGTGCAAATGTCTTATATCAGGAGATTGATTACACAAAGGAAGCTGATAATGCTGAACTATTTGCAAGTAACTTCAAGGACATGGATTATGTAAAAGTCCCAACGATAGTACGGGAATACACCACACCACAGGTTCTAACTATGGAATATGTCCCTGGGATCAAAATAAACAAGATACAAGCTTTGGATCAATTGGGAGTTGATCGCCAGAGGCTGGGGCGATACGCTGTTGAATCATACTTGGAACAAATTCTGTCTCATGGGTTTTTCCATGCTGATCCTCATCCTGGAAATATTGCTGTGGATGATGTCAATGGTGGAAGATTGATCTTTTATGATTTTGGAATGATGGGAAGTATCAGTCCAAATATTAGAGAAGGTTTGCTGGAAACATTTTATGGAGTTTATGAGAAGGATCCAGATAAGGTTCTTCAGGCAATGATTCAAATGGGTGTTCTTGTGCCTACTGGAGATATGACAGCTGTCAGACGAACTGCACAGTTCTTCCTTAGGAGCTTTGAAGAGCGTCTTGCTGCACAGAGAAAAGAGAGAGAAATGGCAACAAAAGAACTTGGATTTAAAAAACCACTGAGCAAGGAGGAGAAGATAATGAAAAAGAAGGAAAGGCTGGCTGCAATTGGGGAAGATTTATTAGCCATTGCAGCAGACCAACCCTTCAGATTTCCTGCGACATTCACATTCGTTGTAAGAGCATTCTCAGTGTTGGATGGAATCGGGAAAGGTCTTGATCCTCGATTTGATATCACTGAGATTGCCAAACCGTATGCACTGGAATTGCTAAAGTTCCGTGAAGCTGGAGTTGAAGTCGTTTGGAAGGACATTAGAAAGCGATGGGACAGGCAATCTCAGGCATTCTATAACTTATTTAGACAGGCAGACAGAGTTGAAAAGCTTGCTGAAATTATCCAAAGATTGGAGCAAGGTGATCTGAAGCTTAGAGTTCGGACTTTGGAATCTGAGAGGGCATTCCAGCGAGTAGCTACTGTCCAGAAGACTGTTGGAAATGCTGTTGCTGCTGGAAGCCTGATCAACCTTGCAACACTCTTGTATATTAATTCCATTCGAGTGCCTGCCATTGCAGCATATATCTCTTGCGCATTTTTTGGCGTTCAAGTTCTTATTGGCATCATAAAGGTCAAAAAGTTTGATGAACGGGAGCGGTTGATAACAGGGACTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1

Protein Analysis

751

Amino Acids

84.85

Weight (kDa)

9.17

Isoelectric Point (pI)

37.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 53 - 300 1.2e-85 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2167
AccB1I GGYRCC 1 cut(s) 114
AccB7I CCANNNNNTGG 2 cut(s) 1264, 1984
AccBSI CCGCTC 2 cut(s) 149, 2230
AccI GTMKAC 2 cut(s) 260, 705
AccII CGCG 3 cut(s) 139, 248, 413
AciI CCGC 8 cut(s) 47, 149, 191, 248, 320, 323, 362, 2230
AclWI GGATC 8 cut(s) 759, 948, 1217, 1245, 1322, 1460, 1473, 1793
AcoI YGGCCR 2 cut(s) 466, 682
AcsI RAATTY 2 cut(s) 569, 1299
AcuI CTGAAG 6 cut(s) 731, 974, 980, 1466, 1711, 2021
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 464
AfaI GTAC 2 cut(s) 921, 1161
AfiI CCNNNNNNNGG 5 cut(s) 125, 547, 1264, 1337, 1984
AflII CTTAAG 1 cut(s) 610
AflIII ACRYGT 1 cut(s) 411
AhdI GACNNNNNGTC 1 cut(s) 1006
AjnI CCWGG 4 cut(s) 460, 928, 1204, 1336
AjuI GAANNNNNNNTTGG 4 cut(s) 275, 307, 789, 821
Alw21I GWGCWC 3 cut(s) 14, 33, 814
Alw26I GTCTC 2 cut(s) 454, 1311
AlwI GGATC 8 cut(s) 759, 948, 1217, 1245, 1322, 1460, 1473, 1793
AlwNI CAGNNNCTG 3 cut(s) 779, 1264, 2246
Ama87I CYCGRG 1 cut(s) 118
AoxI GGCC 4 cut(s) 466, 621, 682, 926
ApeKI GCWGC 7 cut(s) 857, 860, 1583, 1682, 1712, 2084, 2150
ApoI RAATTY 2 cut(s) 569, 1299
AseI ATTAAT 1 cut(s) 2124
AsiSI GCGATCGC 1 cut(s) 137
Asp700I GAANNNNTTC 2 cut(s) 987, 1299
AspLEI GCGC 2 cut(s) 248, 2168
AspS9I GGNCC 3 cut(s) 507, 622, 662
AsuHPI GGTGA 5 cut(s) 25, 236, 307, 872, 2006
AvaI CYCGRG 1 cut(s) 118
AvaII GGWCC 2 cut(s) 507, 662
AxyI CCTNAGG 2 cut(s) 968, 1559
BaeI ACNNNNGTAYC 2 cut(s) 768, 801
BalI TGGCCA 1 cut(s) 684
BamHI GGATCC 1 cut(s) 1465
BanI GGYRCC 1 cut(s) 114
BanII GRGCYC 2 cut(s) 33, 814
BbsI GAAGAC 2 cut(s) 414, 2069
Bbv12I GWGCWC 3 cut(s) 14, 33, 814
BbvI GCAGC 7 cut(s) 844, 847, 1570, 1669, 1724, 2071, 2162
BccI CCATC 6 cut(s) 221, 778, 1007, 1393, 1772, 1896
BceAI ACGGC 2 cut(s) 345, 453
BciT130I CCWGG 4 cut(s) 462, 930, 1206, 1338
BciVI GTATCC 1 cut(s) 224
BclI TGATCA 3 cut(s) 198, 730, 2097
BcoDI GTCTC 2 cut(s) 454, 1311
BfaI CTAG 1 cut(s) 864
BfmI CTRYAG 1 cut(s) 81
BfrI CTTAAG 1 cut(s) 610
BfuI GTATCC 1 cut(s) 224
Bme1390I CCNGG 4 cut(s) 462, 930, 1206, 1338
Bme18I GGWCC 2 cut(s) 507, 662
BmeRI GACNNNNNGTC 1 cut(s) 1006
BmeT110I CYCGRG 1 cut(s) 118
BmgT120I GGNCC 3 cut(s) 507, 622, 662
BmiI GGNNCC 3 cut(s) 116, 663, 1467
BmrFI CCNGG 4 cut(s) 462, 930, 1206, 1338
BmsI GCATC 1 cut(s) 2205
BoxI GACNNNNGTC 1 cut(s) 1532
BpiI GAAGAC 2 cut(s) 414, 2069
BpmI CTGGAG 2 cut(s) 1539, 1887
BpuEI CTTGAG 2 cut(s) 702, 920
BsaBI GATNNNNATC 1 cut(s) 1332
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 454
BsaJI CCNNGG 4 cut(s) 119, 510, 1204, 1205
BsaXI ACNNNNNCTCC 4 cut(s) 801, 831, 1860, 1890
Bsc4I CCNNNNNNNGG 5 cut(s) 125, 547, 1264, 1337, 1984
Bse118I RCCGGY 1 cut(s) 66
Bse1I ACTGG 2 cut(s) 1522, 1845
Bse21I CCTNAGG 2 cut(s) 968, 1559
Bse3DI GCAATG 3 cut(s) 1494, 1707, 2145
Bse8I GATNNNNATC 1 cut(s) 1332
BseBI CCWGG 4 cut(s) 462, 930, 1206, 1338
BseDI CCNNGG 4 cut(s) 119, 510, 1204, 1205
BseGI GGATG 3 cut(s) 1333, 1360, 1783
BseJI GATNNNNATC 1 cut(s) 1332
BseLI CCNNNNNNNGG 5 cut(s) 125, 547, 1264, 1337, 1984
BseMI GCAATG 3 cut(s) 1494, 1707, 2145
BseMII CTCAG 7 cut(s) 644, 959, 1631, 1782, 1809, 1931, 2019
BseNI ACTGG 2 cut(s) 1522, 1845
BseRI GAGGAG 5 cut(s) 194, 356, 380, 407, 1664
BseXI GCAGC 7 cut(s) 844, 847, 1570, 1669, 1724, 2071, 2162
BseYI CCCAGC 1 cut(s) 1264
BsgI GTGCAG 2 cut(s) 1530, 1569
Bsh1236I CGCG 3 cut(s) 139, 248, 413
Bsh1285I CGRYCG 1 cut(s) 137
BshFI GGCC 4 cut(s) 468, 623, 684, 928
BshNI GGYRCC 1 cut(s) 114
BsiEI CGRYCG 1 cut(s) 137
BsiHKAI GWGCWC 3 cut(s) 14, 33, 814
BsiHKCI CYCGRG 1 cut(s) 118
BsiSI CCGG 2 cut(s) 26, 67
BslFI GGGAC 4 cut(s) 340, 1133, 1187, 1919
BslI CCNNNNNNNGG 5 cut(s) 125, 547, 1264, 1337, 1984
BsmAI GTCTC 2 cut(s) 454, 1311
BsmFI GGGAC 4 cut(s) 340, 1133, 1187, 1919
BsmI GAATGC 4 cut(s) 438, 1763, 1922, 2036
BsnI GGCC 4 cut(s) 468, 623, 684, 928
Bso31I GGTCTC 1 cut(s) 454
BsoBI CYCGRG 1 cut(s) 118
Bsp1286I GDGCHC 3 cut(s) 14, 33, 814
Bsp68I TCGCGA 1 cut(s) 139
BspACI CCGC 8 cut(s) 47, 149, 191, 248, 320, 323, 362, 2230
BspANI GGCC 4 cut(s) 468, 623, 684, 928
BspCNI CTCAG 7 cut(s) 645, 960, 1632, 1781, 1810, 1930, 2020
BspFNI CGCG 3 cut(s) 139, 248, 413
BspLI GGNNCC 3 cut(s) 116, 663, 1467
BspPI GGATC 8 cut(s) 759, 948, 1217, 1245, 1322, 1460, 1473, 1793
BspQI GCTCTTC 2 cut(s) 795, 1566
BspT107I GGYRCC 1 cut(s) 114
BspTI CTTAAG 1 cut(s) 610
BspTNI GGTCTC 1 cut(s) 454
BsrBI CCGCTC 2 cut(s) 149, 2230
BsrDI GCAATG 3 cut(s) 1494, 1707, 2145
BsrFI RCCGGY 1 cut(s) 66
BsrI ACTGG 2 cut(s) 1522, 1845
BssAI RCCGGY 1 cut(s) 66
BssECI CCNNGG 4 cut(s) 119, 510, 1204, 1205
BssNAI GTATAC 1 cut(s) 261
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 510
Bst1107I GTATAC 1 cut(s) 261
Bst2UI CCWGG 4 cut(s) 462, 930, 1206, 1338
Bst4CI ACNGT 8 cut(s) 21, 85, 428, 884, 1551, 1833, 2056, 2068
Bst6I CTCTTC 3 cut(s) 795, 1016, 1566
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 610
BstC8I GCNNGC 7 cut(s) 14, 68, 377, 686, 1680, 1965, 2142
BstDEI CTNAG 9 cut(s) 653, 968, 1559, 1640, 1768, 1818, 1917, 2006, 2028
BstENI CCTNNNNNAGG 1 cut(s) 545
BstF5I GGATG 3 cut(s) 1333, 1360, 1783
BstFNI CGCG 3 cut(s) 139, 248, 413
BstHHI GCGC 2 cut(s) 248, 2168
BstMAI GTCTC 2 cut(s) 454, 1311
BstMCI CGRYCG 1 cut(s) 137
BstMWI GCNNNNNNNGC 7 cut(s) 22, 243, 329, 1100, 1712, 2084, 2150
BstNI CCWGG 4 cut(s) 462, 930, 1206, 1338
BstPAI GACNNNNGTC 1 cut(s) 1532
BstSCI CCNGG 4 cut(s) 460, 928, 1204, 1336
BstSFI CTRYAG 1 cut(s) 81
BstUI CGCG 3 cut(s) 139, 248, 413
BstV1I GCAGC 7 cut(s) 844, 847, 1570, 1669, 1724, 2071, 2162
BstV2I GAAGAC 2 cut(s) 414, 2069
BstX2I RGATCY 2 cut(s) 940, 1465
BstYI RGATCY 2 cut(s) 940, 1465
BstZ17I GTATAC 1 cut(s) 261
Bsu36I CCTNAGG 2 cut(s) 968, 1559
BsuI GTATCC 1 cut(s) 224
BsuRI GGCC 4 cut(s) 468, 623, 684, 928
BtgZI GCGATG 1 cut(s) 1915
BtsCI GGATG 3 cut(s) 1333, 1360, 1783
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 6 cut(s) 339, 433, 1637, 1776, 1815, 1838
BtuMI TCGCGA 1 cut(s) 139
Cac8I GCNNGC 7 cut(s) 14, 68, 377, 686, 1680, 1965, 2142
CaiI CAGNNNCTG 3 cut(s) 779, 1264, 2246
CfoI GCGC 2 cut(s) 248, 2168
Cfr10I RCCGGY 1 cut(s) 66
Cfr13I GGNCC 3 cut(s) 507, 622, 662
CseI GACGC 2 cut(s) 419, 1565
CsiI ACCWGGT 1 cut(s) 460
Csp6I GTAC 2 cut(s) 920, 1160
CviAII CATG 3 cut(s) 1132, 1310, 1322
CviQI GTAC 2 cut(s) 920, 1160
DdeI CTNAG 9 cut(s) 653, 968, 1559, 1640, 1768, 1818, 1917, 2006, 2028
DraI TTTAAA 1 cut(s) 1630
DraIII CACNNNGTG 1 cut(s) 464
DriI GACNNNNNGTC 1 cut(s) 1006
EaeI YGGCCR 2 cut(s) 466, 682
Eam1104I CTCTTC 3 cut(s) 795, 1016, 1566
Eam1105I GACNNNNNGTC 1 cut(s) 1006
EarI CTCTTC 3 cut(s) 795, 1016, 1566
EciI GGCGGA 2 cut(s) 206, 377
Ecl136II GAGCTC 2 cut(s) 31, 812
Eco130I CCWWGG 1 cut(s) 510
Eco147I AGGCCT 1 cut(s) 928
Eco24I GRGCYC 2 cut(s) 33, 814
Eco31I GGTCTC 1 cut(s) 454
Eco32I GATATC 1 cut(s) 1813
Eco47I GGWCC 2 cut(s) 507, 662
Eco53kI GAGCTC 2 cut(s) 31, 812
Eco57I CTGAAG 6 cut(s) 731, 974, 980, 1466, 1711, 2021
Eco81I CCTNAGG 2 cut(s) 968, 1559
Eco88I CYCGRG 1 cut(s) 118
EcoICRI GAGCTC 2 cut(s) 31, 812
EcoNI CCTNNNNNAGG 1 cut(s) 545
EcoO109I RGGNCCY 2 cut(s) 507, 622
EcoRII CCWGG 4 cut(s) 460, 928, 1204, 1336
EcoRV GATATC 1 cut(s) 1813
EcoT14I CCWWGG 1 cut(s) 510
EcoT38I GRGCYC 2 cut(s) 33, 814
ErhI CCWWGG 1 cut(s) 510
FaeI CATG 3 cut(s) 1135, 1313, 1325
FalI AAGNNNNNCTT 6 cut(s) 593, 625, 789, 821, 1563, 1595
FaqI GGGAC 4 cut(s) 340, 1133, 1187, 1919
FatI CATG 3 cut(s) 1131, 1309, 1321
FauI CCCGC 1 cut(s) 316
FbaI TGATCA 3 cut(s) 198, 730, 2097
FblI GTMKAC 2 cut(s) 260, 705
FokI GGATG 3 cut(s) 1320, 1367, 1790
FriOI GRGCYC 2 cut(s) 33, 814
FspBI CTAG 1 cut(s) 864
FspI TGCGCA 1 cut(s) 2167
GlaI GCGC 2 cut(s) 247, 2167
GsaI CCCAGC 1 cut(s) 1268
GsuI CTGGAG 2 cut(s) 1539, 1887
HaeIII GGCC 4 cut(s) 468, 623, 684, 928
HapII CCGG 2 cut(s) 26, 67
HgaI GACGC 2 cut(s) 419, 1565
HhaI GCGC 2 cut(s) 248, 2168
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 3 cut(s) 1135, 1313, 1325
Hin6I GCGC 2 cut(s) 246, 2166
HinP1I GCGC 2 cut(s) 246, 2166
HindIII AAGCTT 3 cut(s) 1230, 1961, 2003
HinfI GANTC 8 cut(s) 55, 141, 480, 933, 1283, 1492, 1782, 2024
HpaII CCGG 2 cut(s) 26, 67
HphI GGTGA 5 cut(s) 25, 236, 307, 872, 2006
Hpy166II GTNNAC 4 cut(s) 109, 261, 706, 880
Hpy8I GTNNAC 4 cut(s) 109, 261, 706, 880
Hpy99I CGWCG 2 cut(s) 10, 164
HpyCH4III ACNGT 8 cut(s) 21, 85, 428, 884, 1551, 1833, 2056, 2068
HpyCH4IV ACGT 1 cut(s) 616
HpyF10VI GCNNNNNNNGC 7 cut(s) 22, 243, 329, 1100, 1712, 2084, 2150
HpyF3I CTNAG 9 cut(s) 653, 968, 1559, 1640, 1768, 1818, 1917, 2006, 2028
HpySE526I ACGT 1 cut(s) 616
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 3 cut(s) 1135, 1313, 1325
HspAI GCGC 2 cut(s) 246, 2166
KroI GCCGGC 1 cut(s) 66
KroNI GCCGGC 1 cut(s) 68
Ksp22I TGATCA 3 cut(s) 198, 730, 2097
LguI GCTCTTC 2 cut(s) 795, 1566
LmnI GCTCC 9 cut(s) 28, 193, 242, 288, 809, 817, 1563, 1987, 2227
Lsp1109I GCAGC 7 cut(s) 844, 847, 1570, 1669, 1724, 2071, 2162
LweI GCATC 1 cut(s) 2205
MabI ACCWGGT 1 cut(s) 460
MaeI CTAG 1 cut(s) 864
MaeII ACGT 1 cut(s) 616
MaeIII GTNAC 1 cut(s) 1118
MbiI CCGCTC 2 cut(s) 149, 2230
MfeI CAATTG 3 cut(s) 789, 1241, 1686
MflI RGATCY 2 cut(s) 940, 1465
MhlI GDGCHC 3 cut(s) 14, 33, 814
MlsI TGGCCA 1 cut(s) 684
MluI ACGCGT 1 cut(s) 411
MluNI TGGCCA 1 cut(s) 684
MlyI GAGTC 2 cut(s) 49, 927
MmeI TCCRAC 4 cut(s) 452, 689, 1755, 2050
Mox20I TGGCCA 1 cut(s) 684
MroNI GCCGGC 1 cut(s) 66
MroXI GAANNNNTTC 2 cut(s) 987, 1299
MscI TGGCCA 1 cut(s) 684
MseI TTAA 6 cut(s) 255, 420, 611, 915, 1629, 2124
MslI CAYNNNNRTG 1 cut(s) 2135
Msp20I TGGCCA 1 cut(s) 684
MspA1I CMGCKG 1 cut(s) 1532
MspCI CTTAAG 1 cut(s) 610
MspI CCGG 2 cut(s) 26, 67
MspR9I CCNGG 4 cut(s) 462, 930, 1206, 1338
MunI CAATTG 3 cut(s) 789, 1241, 1686
Mva1269I GAATGC 4 cut(s) 438, 1763, 1922, 2036
MvaI CCWGG 4 cut(s) 462, 930, 1206, 1338
MvnI CGCG 3 cut(s) 139, 248, 413
MwoI GCNNNNNNNGC 7 cut(s) 22, 243, 329, 1100, 1712, 2084, 2150
NaeI GCCGGC 1 cut(s) 68
NgoMIV GCCGGC 1 cut(s) 66
NlaIII CATG 3 cut(s) 1135, 1313, 1325
NlaIV GGNNCC 3 cut(s) 116, 663, 1467
NruI TCGCGA 1 cut(s) 139
NsbI TGCGCA 1 cut(s) 2167
PasI CCCWGGG 1 cut(s) 1205
PceI AGGCCT 1 cut(s) 928
PciSI GCTCTTC 2 cut(s) 795, 1566
PcsI WCGNNNNNNNCGW 1 cut(s) 50
PctI GAATGC 4 cut(s) 438, 1763, 1922, 2036
PdiI GCCGGC 1 cut(s) 68
PdmI GAANNNNTTC 2 cut(s) 987, 1299
PfeI GAWTC 6 cut(s) 141, 480, 1283, 1492, 1782, 2024
PflMI CCANNNNNTGG 2 cut(s) 1264, 1984
PfoI TCCNGGA 1 cut(s) 1336
Ple19I CGATCG 1 cut(s) 137
PleI GAGTC 2 cut(s) 49, 927
PpsI GAGTC 2 cut(s) 49, 927
PpuMI RGGWCCY 1 cut(s) 507
PshAI GACNNNNGTC 1 cut(s) 1532
PshBI ATTAAT 1 cut(s) 2124
Psp124BI GAGCTC 2 cut(s) 33, 814
Psp5II RGGWCCY 1 cut(s) 507
Psp6I CCWGG 4 cut(s) 460, 928, 1204, 1336
PspFI CCCAGC 1 cut(s) 1264
PspGI CCWGG 4 cut(s) 460, 928, 1204, 1336
PspN4I GGNNCC 3 cut(s) 116, 663, 1467
PspPI GGNCC 3 cut(s) 507, 622, 662
PspPPI RGGWCCY 1 cut(s) 507
PstNI CAGNNNCTG 3 cut(s) 779, 1264, 2246
PsuI RGATCY 2 cut(s) 940, 1465
PvuI CGATCG 1 cut(s) 137
PvuII CAGCTG 1 cut(s) 1532
RgaI GCGATCGC 1 cut(s) 137
RruI TCGCGA 1 cut(s) 139
RsaI GTAC 2 cut(s) 921, 1161
RsaNI GTAC 2 cut(s) 920, 1160
RseI CAYNNNNRTG 1 cut(s) 2135
SacI GAGCTC 2 cut(s) 33, 814
SapI GCTCTTC 2 cut(s) 795, 1566
SaqAI TTAA 6 cut(s) 255, 420, 611, 915, 1629, 2124
Sau96I GGNCC 3 cut(s) 507, 622, 662
SchI GAGTC 2 cut(s) 49, 927
ScrFI CCNGG 4 cut(s) 462, 930, 1206, 1338
SduI GDGCHC 3 cut(s) 14, 33, 814
SexAI ACCWGGT 1 cut(s) 460
SfaAI GCGATCGC 1 cut(s) 137
SfaNI GCATC 1 cut(s) 2205
SfcI CTRYAG 1 cut(s) 81
SgfI GCGATCGC 1 cut(s) 137
SinI GGWCC 2 cut(s) 507, 662
SmiMI CAYNNNNRTG 1 cut(s) 2135
SmlI CTYRAG 3 cut(s) 610, 717, 935
SmoI CTYRAG 3 cut(s) 610, 717, 935
SseBI AGGCCT 1 cut(s) 928
SsiI CCGC 8 cut(s) 47, 149, 191, 248, 320, 323, 362, 2230
SspI AATATT 3 cut(s) 649, 1345, 1420
SspMI CTAG 1 cut(s) 864
SstI GAGCTC 2 cut(s) 33, 814
StuI AGGCCT 1 cut(s) 928
StyD4I CCNGG 4 cut(s) 460, 928, 1204, 1336
StyI CCWWGG 1 cut(s) 510
TaaI ACNGT 8 cut(s) 21, 85, 428, 884, 1551, 1833, 2056, 2068
TaiI ACGT 1 cut(s) 619
TaqI TCGA 5 cut(s) 95, 580, 695, 1804, 2134
TatI WGTACW 1 cut(s) 919
TauI GCSGC 4 cut(s) 49, 152, 251, 323
TfiI GAWTC 6 cut(s) 141, 480, 1283, 1492, 1782, 2024
Tru1I TTAA 6 cut(s) 255, 420, 611, 915, 1629, 2124
Tru9I TTAA 6 cut(s) 255, 420, 611, 915, 1629, 2124
TscAI CASTG 6 cut(s) 339, 433, 1644, 1776, 1822, 1845
TseI GCWGC 7 cut(s) 857, 860, 1583, 1682, 1712, 2084, 2150
TspDTI ATGAA 5 cut(s) 661, 837, 861, 1676, 2235
TspGWI ACGGA 1 cut(s) 1847
TspRI CASTG 6 cut(s) 339, 433, 1644, 1776, 1822, 1845
Van91I CCANNNNNTGG 2 cut(s) 1264, 1984
Vha464I CTTAAG 1 cut(s) 610
VpaK11BI GGWCC 2 cut(s) 507, 662
VspI ATTAAT 1 cut(s) 2124
XagI CCTNNNNNAGG 1 cut(s) 545
XapI RAATTY 2 cut(s) 569, 1299
XcmI CCANNNNNNNNNTGG 1 cut(s) 2066
XmiI GTMKAC 2 cut(s) 260, 705
XmnI GAANNNNTTC 2 cut(s) 987, 1299
XspI CTAG 1 cut(s) 864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.