aarF domain-containing protein kinase At1g79600
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G64940 AT5G64940 |
| fragaria_vesca | FvH4_1g22080 FvH4_1g22080 FvH4_1g22080 FvH4_1g22080 |
| malus_domestica | MD01G1017900.v1.1 MD15G1334400.v1.1 |
| prunus_persica | Prupe.6G175300_v2.0.a1 Prupe.6G175300_v2.0.a1 |
| pyrus_communis | pycom01g04800 pycom15g29110 |
| rosa_chinensis | RchiOBHm_Chr2g0116161 |
| rosa_laevigata | RLG00000018244 |
| rosa_roxburghii | Rroxscaffold_2G00127450 |
| rosa_rugosa | Rorug02G0203900 Rorug02G0204000 Rorug02G0204100 Rorug02G0204200 |
| rosa_samantha | Rh2AG260300 Rh2BG271400 Rh2CG266500 Rh2DG268500 |
| rosa_wichuraiana | Rw2G020390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1087 |
| AccBSI | CCGCTC | 1 cut(s) | 2257 |
| AccIII | TCCGGA | 2 cut(s) | 25, 110 |
| AciI | CCGC | 6 cut(s) | 67, 362, 457, 891, 1649, 2257 |
| AclWI | GGATC | 7 cut(s) | 792, 981, 1250, 1355, 1493, 1506, 1826 |
| AcoI | YGGCCR | 2 cut(s) | 499, 715 |
| AcsI | RAATTY | 4 cut(s) | 377, 602, 1332, 1886 |
| AcuI | CTGAAG | 7 cut(s) | 692, 764, 989, 1141, 1499, 1744, 2198 |
| AdeI | CACNNNGTG | 1 cut(s) | 497 |
| AfaI | GTAC | 4 cut(s) | 247, 290, 954, 1232 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 125, 580, 1370 |
| AflII | CTTAAG | 2 cut(s) | 992, 1916 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1039, 1945 |
| AhlI | ACTAGT | 1 cut(s) | 248 |
| AjnI | CCWGG | 4 cut(s) | 493, 961, 1237, 1369 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 822, 854 |
| AleI | CACNNNNGTG | 1 cut(s) | 734 |
| AluBI | AGCT | 9 cut(s) | 236, 327, 815, 838, 1127, 1265, 1565, 1898, 1996 |
| AluI | AGCT | 9 cut(s) | 236, 327, 815, 838, 1127, 1265, 1565, 1898, 1996 |
| Alw21I | GWGCWC | 1 cut(s) | 847 |
| Alw26I | GTCTC | 3 cut(s) | 1344, 1564, 1953 |
| AlwI | GGATC | 7 cut(s) | 792, 981, 1250, 1355, 1493, 1506, 1826 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1219, 2117 |
| Ama87I | CYCGRG | 1 cut(s) | 118 |
| Aor13HI | TCCGGA | 2 cut(s) | 25, 110 |
| AoxI | GGCC | 6 cut(s) | 163, 499, 654, 715, 959, 2209 |
| ApeKI | GCWGC | 7 cut(s) | 359, 893, 1127, 1616, 1715, 1745, 2117 |
| ApoI | RAATTY | 4 cut(s) | 377, 602, 1332, 1886 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1285, 1317 |
| AseI | ATTAAT | 1 cut(s) | 2157 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1020, 1911, 2007 |
| AspLEI | GCGC | 1 cut(s) | 1088 |
| AspS9I | GGNCC | 6 cut(s) | 540, 655, 695, 910, 1510, 1921 |
| AsuHPI | GGTGA | 5 cut(s) | 25, 36, 325, 343, 2251 |
| AvaI | CYCGRG | 1 cut(s) | 118 |
| AvaII | GGWCC | 5 cut(s) | 540, 695, 910, 1510, 1921 |
| AxyI | CCTNAGG | 1 cut(s) | 1001 |
| BalI | TGGCCA | 1 cut(s) | 717 |
| BamHI | GGATCC | 1 cut(s) | 1498 |
| BauI | CACGAG | 1 cut(s) | 1950 |
| BbsI | GAAGAC | 1 cut(s) | 2102 |
| Bbv12I | GWGCWC | 1 cut(s) | 847 |
| BbvI | GCAGC | 7 cut(s) | 371, 880, 1114, 1603, 1702, 1757, 2104 |
| BccI | CCATC | 6 cut(s) | 811, 1040, 1426, 1525, 1805, 1929 |
| BceAI | ACGGC | 3 cut(s) | 178, 486, 1367 |
| BciT130I | CCWGG | 4 cut(s) | 495, 963, 1239, 1371 |
| BciVI | GTATCC | 1 cut(s) | 107 |
| BclI | TGATCA | 2 cut(s) | 195, 763 |
| BcoDI | GTCTC | 3 cut(s) | 1344, 1564, 1953 |
| BcuI | ACTAGT | 1 cut(s) | 248 |
| BfaI | CTAG | 2 cut(s) | 249, 897 |
| BfmI | CTRYAG | 2 cut(s) | 1266, 2100 |
| BfrI | CTTAAG | 2 cut(s) | 992, 1916 |
| BfuI | GTATCC | 1 cut(s) | 107 |
| BisI | GCNGC | 9 cut(s) | 67, 360, 891, 894, 1128, 1617, 1716, 1746, 2118 |
| BlsI | GCNGC | 9 cut(s) | 68, 361, 892, 895, 1129, 1618, 1717, 1747, 2119 |
| BmcAI | AGTACT | 2 cut(s) | 247, 290 |
| Bme1390I | CCNGG | 4 cut(s) | 495, 963, 1239, 1371 |
| Bme18I | GGWCC | 5 cut(s) | 540, 695, 910, 1510, 1921 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1039, 1945 |
| BmeT110I | CYCGRG | 1 cut(s) | 118 |
| BmgT120I | GGNCC | 6 cut(s) | 540, 655, 695, 910, 1510, 1921 |
| BmiI | GGNNCC | 1 cut(s) | 1500 |
| BmrFI | CCNGG | 4 cut(s) | 495, 963, 1239, 1371 |
| BmsI | GCATC | 2 cut(s) | 433, 2238 |
| BpiI | GAAGAC | 1 cut(s) | 2102 |
| BpmI | CTGGAG | 2 cut(s) | 1572, 1920 |
| BpuEI | CTTGAG | 2 cut(s) | 664, 735 |
| Bsa29I | ATCGAT | 1 cut(s) | 868 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1365 |
| BsaJI | CCNNGG | 6 cut(s) | 119, 543, 1119, 1237, 1238, 1383 |
| BsaWI | WCCGGW | 2 cut(s) | 25, 110 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 225, 255, 1893, 1923 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 125, 580, 1370 |
| Bse1I | ACTGG | 2 cut(s) | 1555, 1878 |
| Bse21I | CCTNAGG | 1 cut(s) | 1001 |
| Bse3DI | GCAATG | 4 cut(s) | 277, 355, 1527, 1740 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1365 |
| BseAI | TCCGGA | 2 cut(s) | 25, 110 |
| BseBI | CCWGG | 4 cut(s) | 495, 963, 1239, 1371 |
| BseCI | ATCGAT | 1 cut(s) | 868 |
| BseDI | CCNNGG | 6 cut(s) | 119, 543, 1119, 1237, 1238, 1383 |
| BseGI | GGATG | 3 cut(s) | 1366, 1393, 1816 |
| BseJI | GATNNNNATC | 1 cut(s) | 1365 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 125, 580, 1370 |
| BseMI | GCAATG | 4 cut(s) | 277, 355, 1527, 1740 |
| BseMII | CTCAG | 4 cut(s) | 291, 992, 1842, 2052 |
| BseNI | ACTGG | 2 cut(s) | 1555, 1878 |
| BseRI | GAGGAG | 1 cut(s) | 1118 |
| BseXI | GCAGC | 7 cut(s) | 371, 880, 1114, 1603, 1702, 1757, 2104 |
| BsgI | GTGCAG | 1 cut(s) | 1602 |
| BshFI | GGCC | 6 cut(s) | 165, 501, 656, 717, 961, 2211 |
| BshVI | ATCGAT | 1 cut(s) | 868 |
| BsiHKAI | GWGCWC | 1 cut(s) | 847 |
| BsiHKCI | CYCGRG | 1 cut(s) | 118 |
| BsiSI | CCGG | 3 cut(s) | 26, 111, 2121 |
| BslFI | GGGAC | 5 cut(s) | 121, 945, 1166, 1220, 1952 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 125, 580, 1370 |
| BsmAI | GTCTC | 3 cut(s) | 1344, 1564, 1953 |
| BsmBI | CGTCTC | 1 cut(s) | 1564 |
| BsmFI | GGGAC | 5 cut(s) | 121, 945, 1166, 1220, 1952 |
| BsmI | GAATGC | 2 cut(s) | 1955, 2069 |
| BsnI | GGCC | 6 cut(s) | 165, 501, 656, 717, 961, 2211 |
| BsoBI | CYCGRG | 1 cut(s) | 118 |
| Bsp1286I | GDGCHC | 1 cut(s) | 847 |
| Bsp13I | TCCGGA | 2 cut(s) | 25, 110 |
| BspACI | CCGC | 6 cut(s) | 67, 362, 457, 891, 1649, 2257 |
| BspANI | GGCC | 6 cut(s) | 165, 501, 656, 717, 961, 2211 |
| BspCNI | CTCAG | 4 cut(s) | 290, 993, 1843, 2053 |
| BspDI | ATCGAT | 1 cut(s) | 868 |
| BspEI | TCCGGA | 2 cut(s) | 25, 110 |
| BspLI | GGNNCC | 1 cut(s) | 1500 |
| BspPI | GGATC | 7 cut(s) | 792, 981, 1250, 1355, 1493, 1506, 1826 |
| BspQI | GCTCTTC | 2 cut(s) | 828, 1599 |
| BspTI | CTTAAG | 2 cut(s) | 992, 1916 |
| BsrBI | CCGCTC | 1 cut(s) | 2257 |
| BsrDI | GCAATG | 4 cut(s) | 277, 355, 1527, 1740 |
| BsrI | ACTGG | 2 cut(s) | 1555, 1878 |
| BssECI | CCNNGG | 6 cut(s) | 119, 543, 1119, 1237, 1238, 1383 |
| BssSI | CACGAG | 1 cut(s) | 1950 |
| BssT1I | CCWWGG | 2 cut(s) | 543, 1119 |
| Bst2BI | CACGAG | 1 cut(s) | 1950 |
| Bst2UI | CCWGG | 4 cut(s) | 495, 963, 1239, 1371 |
| Bst4CI | ACNGT | 4 cut(s) | 917, 1598, 2089, 2101 |
| Bst6I | CTCTTC | 4 cut(s) | 171, 828, 1049, 1599 |
| BstAFI | CTTAAG | 2 cut(s) | 992, 1916 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2117 |
| BstC8I | GCNNGC | 3 cut(s) | 719, 1713, 1998 |
| BstDEI | CTNAG | 6 cut(s) | 277, 1001, 1851, 2039, 2061, 2283 |
| BstDSI | CCRYGG | 1 cut(s) | 1383 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 578 |
| BstF5I | GGATG | 3 cut(s) | 1366, 1393, 1816 |
| BstHHI | GCGC | 1 cut(s) | 1088 |
| BstMAI | GTCTC | 3 cut(s) | 1344, 1564, 1953 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 463, 1745, 2117, 2183 |
| BstNI | CCWGG | 4 cut(s) | 495, 963, 1239, 1371 |
| BstSCI | CCNGG | 4 cut(s) | 493, 961, 1237, 1369 |
| BstSFI | CTRYAG | 2 cut(s) | 1266, 2100 |
| BstV1I | GCAGC | 7 cut(s) | 371, 880, 1114, 1603, 1702, 1757, 2104 |
| BstV2I | GAAGAC | 1 cut(s) | 2102 |
| BstX2I | RGATCY | 2 cut(s) | 973, 1498 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 736 |
| BstYI | RGATCY | 2 cut(s) | 973, 1498 |
| Bsu15I | ATCGAT | 1 cut(s) | 868 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1001 |
| BsuI | GTATCC | 1 cut(s) | 107 |
| BsuRI | GGCC | 6 cut(s) | 165, 501, 656, 717, 961, 2211 |
| BsuTUI | ATCGAT | 1 cut(s) | 868 |
| BtgI | CCRYGG | 1 cut(s) | 1383 |
| BtsCI | GGATG | 3 cut(s) | 1366, 1393, 1816 |
| BtsIMutI | CAGTG | 2 cut(s) | 285, 1871 |
| Cac8I | GCNNGC | 3 cut(s) | 719, 1713, 1998 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1219, 2117 |
| CfoI | GCGC | 1 cut(s) | 1088 |
| Cfr13I | GGNCC | 6 cut(s) | 540, 655, 695, 910, 1510, 1921 |
| ClaI | ATCGAT | 1 cut(s) | 868 |
| CseI | GACGC | 1 cut(s) | 1598 |
| CsiI | ACCWGGT | 1 cut(s) | 493 |
| Csp6I | GTAC | 4 cut(s) | 246, 289, 953, 1231 |
| CviAII | CATG | 3 cut(s) | 1165, 1343, 1355 |
| CviQI | GTAC | 4 cut(s) | 246, 289, 953, 1231 |
| DdeI | CTNAG | 6 cut(s) | 277, 1001, 1851, 2039, 2061, 2283 |
| DraI | TTTAAA | 1 cut(s) | 1663 |
| DraIII | CACNNNGTG | 1 cut(s) | 497 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1039, 1945 |
| EaeI | YGGCCR | 2 cut(s) | 499, 715 |
| Eam1104I | CTCTTC | 4 cut(s) | 171, 828, 1049, 1599 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1039, 1945 |
| EarI | CTCTTC | 4 cut(s) | 171, 828, 1049, 1599 |
| Eco130I | CCWWGG | 2 cut(s) | 543, 1119 |
| Eco147I | AGGCCT | 1 cut(s) | 961 |
| Eco47I | GGWCC | 5 cut(s) | 540, 695, 910, 1510, 1921 |
| Eco57I | CTGAAG | 7 cut(s) | 692, 764, 989, 1141, 1499, 1744, 2198 |
| Eco81I | CCTNAGG | 1 cut(s) | 1001 |
| Eco88I | CYCGRG | 1 cut(s) | 118 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 578 |
| EcoO109I | RGGNCCY | 4 cut(s) | 540, 655, 1510, 1921 |
| EcoRII | CCWGG | 4 cut(s) | 493, 961, 1237, 1369 |
| EcoT14I | CCWWGG | 2 cut(s) | 543, 1119 |
| ErhI | CCWWGG | 2 cut(s) | 543, 1119 |
| Esp3I | CGTCTC | 1 cut(s) | 1564 |
| FaeI | CATG | 3 cut(s) | 1168, 1346, 1358 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 626, 658, 822, 854, 1596, 1628, 1899, 1931 |
| FaqI | GGGAC | 5 cut(s) | 121, 945, 1166, 1220, 1952 |
| FatI | CATG | 3 cut(s) | 1164, 1342, 1354 |
| FauI | CCCGC | 1 cut(s) | 2250 |
| FauNDI | CATATG | 1 cut(s) | 2188 |
| FbaI | TGATCA | 2 cut(s) | 195, 763 |
| Fnu4HI | GCNGC | 9 cut(s) | 67, 360, 891, 894, 1128, 1617, 1716, 1746, 2118 |
| FokI | GGATG | 3 cut(s) | 1353, 1400, 1823 |
| Fsp4HI | GCNGC | 9 cut(s) | 67, 360, 891, 894, 1128, 1617, 1716, 1746, 2118 |
| FspBI | CTAG | 2 cut(s) | 249, 897 |
| FspI | TGCGCA | 1 cut(s) | 1087 |
| GlaI | GCGC | 1 cut(s) | 1087 |
| GluI | GCNGC | 9 cut(s) | 67, 360, 891, 894, 1128, 1617, 1716, 1746, 2118 |
| GsuI | CTGGAG | 2 cut(s) | 1572, 1920 |
| HaeIII | GGCC | 6 cut(s) | 165, 501, 656, 717, 961, 2211 |
| HapII | CCGG | 3 cut(s) | 26, 111, 2121 |
| HgaI | GACGC | 1 cut(s) | 1598 |
| HhaI | GCGC | 1 cut(s) | 1088 |
| Hin1II | CATG | 3 cut(s) | 1168, 1346, 1358 |
| Hin6I | GCGC | 1 cut(s) | 1086 |
| HinP1I | GCGC | 1 cut(s) | 1086 |
| HindIII | AAGCTT | 1 cut(s) | 1994 |
| HinfI | GANTC | 7 cut(s) | 141, 392, 513, 1316, 1525, 2057, 2079 |
| HpaII | CCGG | 3 cut(s) | 26, 111, 2121 |
| HphI | GGTGA | 5 cut(s) | 25, 36, 325, 343, 2251 |
| Hpy166II | GTNNAC | 2 cut(s) | 739, 913 |
| Hpy8I | GTNNAC | 2 cut(s) | 739, 913 |
| HpyCH4III | ACNGT | 4 cut(s) | 917, 1598, 2089, 2101 |
| HpyCH4IV | ACGT | 1 cut(s) | 1233 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 463, 1745, 2117, 2183 |
| HpyF3I | CTNAG | 6 cut(s) | 277, 1001, 1851, 2039, 2061, 2283 |
| HpySE526I | ACGT | 1 cut(s) | 1233 |
| Hsp92II | CATG | 3 cut(s) | 1168, 1346, 1358 |
| HspAI | GCGC | 1 cut(s) | 1086 |
| Kpn2I | TCCGGA | 2 cut(s) | 25, 110 |
| Ksp22I | TGATCA | 2 cut(s) | 195, 763 |
| LguI | GCTCTTC | 2 cut(s) | 828, 1599 |
| LmnI | GCTCC | 6 cut(s) | 233, 267, 324, 850, 1327, 2020 |
| Lsp1109I | GCAGC | 7 cut(s) | 371, 880, 1114, 1603, 1702, 1757, 2104 |
| LweI | GCATC | 2 cut(s) | 433, 2238 |
| MabI | ACCWGGT | 1 cut(s) | 493 |
| MaeI | CTAG | 2 cut(s) | 249, 897 |
| MaeII | ACGT | 1 cut(s) | 1233 |
| MaeIII | GTNAC | 2 cut(s) | 260, 1151 |
| MbiI | CCGCTC | 1 cut(s) | 2257 |
| MfeI | CAATTG | 3 cut(s) | 767, 1274, 1719 |
| MflI | RGATCY | 2 cut(s) | 973, 1498 |
| MhlI | GDGCHC | 1 cut(s) | 847 |
| MlsI | TGGCCA | 1 cut(s) | 717 |
| MluNI | TGGCCA | 1 cut(s) | 717 |
| MlyI | GAGTC | 2 cut(s) | 401, 2088 |
| MmeI | TCCRAC | 2 cut(s) | 485, 722 |
| Mox20I | TGGCCA | 1 cut(s) | 717 |
| MroI | TCCGGA | 2 cut(s) | 25, 110 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1020, 1911, 2007 |
| MscI | TGGCCA | 1 cut(s) | 717 |
| MseI | TTAA | 9 cut(s) | 453, 948, 993, 1176, 1251, 1593, 1662, 1917, 2157 |
| MslI | CAYNNNNRTG | 2 cut(s) | 734, 2237 |
| Msp20I | TGGCCA | 1 cut(s) | 717 |
| MspA1I | CMGCKG | 4 cut(s) | 362, 893, 1565, 1649 |
| MspCI | CTTAAG | 2 cut(s) | 992, 1916 |
| MspI | CCGG | 3 cut(s) | 26, 111, 2121 |
| MspR9I | CCNGG | 4 cut(s) | 495, 963, 1239, 1371 |
| MunI | CAATTG | 3 cut(s) | 767, 1274, 1719 |
| Mva1269I | GAATGC | 2 cut(s) | 1955, 2069 |
| MvaI | CCWGG | 4 cut(s) | 495, 963, 1239, 1371 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 463, 1745, 2117, 2183 |
| NdeI | CATATG | 1 cut(s) | 2188 |
| NlaIII | CATG | 3 cut(s) | 1168, 1346, 1358 |
| NlaIV | GGNNCC | 1 cut(s) | 1500 |
| NsbI | TGCGCA | 1 cut(s) | 1087 |
| OliI | CACNNNNGTG | 1 cut(s) | 734 |
| PasI | CCCWGGG | 1 cut(s) | 1238 |
| PceI | AGGCCT | 1 cut(s) | 961 |
| PciSI | GCTCTTC | 2 cut(s) | 828, 1599 |
| PctI | GAATGC | 2 cut(s) | 1955, 2069 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1020, 1911, 2007 |
| PfeI | GAWTC | 5 cut(s) | 141, 513, 1316, 1525, 2057 |
| PfoI | TCCNGGA | 1 cut(s) | 1369 |
| PkrI | GCNGC | 9 cut(s) | 68, 361, 892, 895, 1129, 1618, 1717, 1747, 2119 |
| PleI | GAGTC | 2 cut(s) | 400, 2087 |
| PpsI | GAGTC | 2 cut(s) | 400, 2087 |
| PpuMI | RGGWCCY | 3 cut(s) | 540, 1510, 1921 |
| PshBI | ATTAAT | 1 cut(s) | 2157 |
| Psp5II | RGGWCCY | 3 cut(s) | 540, 1510, 1921 |
| Psp6I | CCWGG | 4 cut(s) | 493, 961, 1237, 1369 |
| PspGI | CCWGG | 4 cut(s) | 493, 961, 1237, 1369 |
| PspN4I | GGNNCC | 1 cut(s) | 1500 |
| PspPI | GGNCC | 6 cut(s) | 540, 655, 695, 910, 1510, 1921 |
| PspPPI | RGGWCCY | 3 cut(s) | 540, 1510, 1921 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1219, 2117 |
| PsuI | RGATCY | 2 cut(s) | 973, 1498 |
| PvuII | CAGCTG | 1 cut(s) | 1565 |
| RsaI | GTAC | 4 cut(s) | 247, 290, 954, 1232 |
| RsaNI | GTAC | 4 cut(s) | 246, 289, 953, 1231 |
| RseI | CAYNNNNRTG | 2 cut(s) | 734, 2237 |
| SapI | GCTCTTC | 2 cut(s) | 828, 1599 |
| SaqAI | TTAA | 9 cut(s) | 453, 948, 993, 1176, 1251, 1593, 1662, 1917, 2157 |
| SatI | GCNGC | 9 cut(s) | 67, 360, 891, 894, 1128, 1617, 1716, 1746, 2118 |
| Sau96I | GGNCC | 6 cut(s) | 540, 655, 695, 910, 1510, 1921 |
| ScaI | AGTACT | 2 cut(s) | 247, 290 |
| SchI | GAGTC | 2 cut(s) | 401, 2088 |
| ScrFI | CCNGG | 4 cut(s) | 495, 963, 1239, 1371 |
| SduI | GDGCHC | 1 cut(s) | 847 |
| SexAI | ACCWGGT | 1 cut(s) | 493 |
| SfaNI | GCATC | 2 cut(s) | 433, 2238 |
| SfcI | CTRYAG | 2 cut(s) | 1266, 2100 |
| SinI | GGWCC | 5 cut(s) | 540, 695, 910, 1510, 1921 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 734, 2237 |
| SmlI | CTYRAG | 4 cut(s) | 643, 750, 992, 1916 |
| SmoI | CTYRAG | 4 cut(s) | 643, 750, 992, 1916 |
| SpeI | ACTAGT | 1 cut(s) | 248 |
| SseBI | AGGCCT | 1 cut(s) | 961 |
| SsiI | CCGC | 6 cut(s) | 67, 362, 457, 891, 1649, 2257 |
| SspI | AATATT | 2 cut(s) | 985, 1378 |
| SspMI | CTAG | 2 cut(s) | 249, 897 |
| StuI | AGGCCT | 1 cut(s) | 961 |
| StyD4I | CCNGG | 4 cut(s) | 493, 961, 1237, 1369 |
| StyI | CCWWGG | 2 cut(s) | 543, 1119 |
| TaaI | ACNGT | 4 cut(s) | 917, 1598, 2089, 2101 |
| TaiI | ACGT | 1 cut(s) | 1236 |
| TaqI | TCGA | 9 cut(s) | 293, 395, 477, 527, 868, 1303, 1314, 1837, 2167 |
| TatI | WGTACW | 3 cut(s) | 245, 288, 952 |
| TauI | GCSGC | 2 cut(s) | 69, 893 |
| TfiI | GAWTC | 5 cut(s) | 141, 513, 1316, 1525, 2057 |
| Tru1I | TTAA | 9 cut(s) | 453, 948, 993, 1176, 1251, 1593, 1662, 1917, 2157 |
| Tru9I | TTAA | 9 cut(s) | 453, 948, 993, 1176, 1251, 1593, 1662, 1917, 2157 |
| TscAI | CASTG | 2 cut(s) | 285, 1878 |
| TseI | GCWGC | 7 cut(s) | 359, 893, 1127, 1616, 1715, 1745, 2117 |
| TspDTI | ATGAA | 3 cut(s) | 694, 894, 1343 |
| TspRI | CASTG | 2 cut(s) | 285, 1878 |
| Vha464I | CTTAAG | 2 cut(s) | 992, 1916 |
| VpaK11BI | GGWCC | 5 cut(s) | 540, 695, 910, 1510, 1921 |
| VspI | ATTAAT | 1 cut(s) | 2157 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 578 |
| XapI | RAATTY | 4 cut(s) | 377, 602, 1332, 1886 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1191 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1020, 1911, 2007 |
| XspI | CTAG | 2 cut(s) | 249, 897 |
| ZrmI | AGTACT | 2 cut(s) | 247, 290 |