Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0011220

Physical Location & Seq

Genomic Coordinates Forward (+)

4348520 .. 4352642

Gene Structure 4123 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g05270.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGAGCTCCAAAACACAAGTTCTCTGTTTCTGGTGCTCCCTTTTGCTTCTTCTAGTGCCTTCATTGTCACTAAACTCAGATGGAGTTTTCTTGCTTGCTTTCAAGTACTCCATCCTCAGTGATCCACTTTCAGTCCTAGAAAGCTGGAACTATGAGGATGAAACGCCTTGTTCATGGAGTGGAGTCACATGCACCCAACTCGGAAACCCCGGAACTACTGACATGTTCAGAGTCACAAGCTTGGTCCTCCCAAGTAGACAGCTTTTGGGTTCTATAGCTGAAGAGTTGGGAATGATAGAACACCTTGTCCATCTTGATCTTTCCAACAATTTCTTCAATGGGTCTCTGCCTAAAACCATTCTCAATGCCTCTGAGCTTCAGGTGCTTTCTCTCTCAAACAATGTCATCTCCGGTGAGCTTCCTGAGTCCATTGGTGATCTCAAAAGCCTTCAGCTTCTCAACATTTCCGACAATGCTTTGGCCGGAAAAGTCCCTCAAAACCTCACTTCTCTACAAAACCTCACTGTAGTTTCTCTGAGAAGCAACTACTTCACTGGTAATGTCCCAACTGGGTTCAATTCCGTAGAGGTTTTAGATCTCTCTTCAAATCTTCTCAATGGTTCTCTGCCTCTTGATTTCGGTGGAAACAATCTGCGCTACTTAAACCTCTCTTACAACAAGATTTGGGGGAAAATACCAGCAGAGTTTGCAACGCATATTTCACTAAATTCAACCATTGATCTCTCCTTCAACAACTTAACCGGACCAATCCCGGATTCACAAGCTTTGCTCCACCAGAAAACAGAGCAGTTTGCAGGAAATAGTGAACTTTGCGGCAAACCGTTGAAGAATCTTTGCCCAATTCCTTCTACTCTGTCTACTCCTCCAAATGTGACTTCATCTTCTCCAGCTATTGCAGCCATTCCCAAAACACTCGACTCAAACCCGGAACCAAACACAACCGGCGCACCAAACGGTACTCAGAACAAAACCCAAACAGGGCTAAAACCGGTCACAATCACCGGAATAGTAGTCGGGGACTTAGCCGGAATAGCCATCATAGGGCTGGTCATTCTCTACGTCTACCAAGTCAGGAAGAGATCAAGCAAACTCAACCAAACTTCCGCTTCATCATCATCAGACCCGGAGAAGAAACCAGACATTGTCACTAAAATAGAGGCATCTGCAACAAAACCATCATCATGGTCATGCATCACCATCAAAGGCGAAGAGACTTCCGAAGCAACCAGCTCAGACAGTGACCACGATGACCATGCAAATGATCAAAACGTTGGAAACAACGCCAAGCGTGGCGTGCTGATAACCGTAGACGGGGAGCCGGAGCTTGAGCTGGAGACGTTGCTGAAGGCCTCGGCGTATGTGTTGGGTGCTAGTGGTCCGAGCATTGTGTATAAGGCTGTGCTGGAAGACAAGACGGCGCTGGCGGTGAGGAGGATTGGAGAGAGTGTGGTGGAGAAAATGAGGGATTTCGAGAACCAAGTGAGGGCCATTGCCAAGATGAGGCACCCAAATTTGGTGAGGGTTCGTGGGTTTTATTGGGGAGAAGATGAGAAGCTTGTGATATATGACTATGTTTCCAATGGCAGCCTCGCCGGCACCGTTAACAGAAAAGCAGGTTCATCTCCATACCATCTGCCTCTACAAGTTCGGTTGAAGATAGCGAGAGGCATTGCTCGGGGGCTAGGCTACATCCACGATAAGAAAAACGTGCATGGAAATATAAAACCAAGCAACATTCTTCTAAACTCCGATTTCGACCCTGTAATAAGTGATTTCGGCCTTGACAAGCTAATGCTGGGCGGCATGATCAGTCACAAAGGTAGTGGTTCTGCCCGAGGGTATTTTGGAAGCCTAAAGTCCGCAGGGGCTCGAGAAGGTTTTAATGAAGTGGTACCACCAGTTGCCGGCAGCCCCATTGCGACATCTTCCTCCGCAGGAGGTGCATTGTCGCCTTATCAAGCCCCTGAGTCCTTGAAGAACTTGAGGCCGAACCCCAAGTGGGACGTGTACTCTTTTGGTATAGTTTTGCTAGAGCTTCTCACGGGTAGGGTATTTTCAGAAAGGGAGCTAGCGGACCAGTGGACCGCTGGCTCGCTGATGGGGGAGAAGAACCGGGTTCTGGTGATGGTCGACGTGGCGATTCGGGCTGAAGTGGAGGGTAGGGAAGATGCATTGCAGGCTTGTTTGAAGCTAGGGTTTAGTTGCGCTAGTTTTGTTCCGCAGAAGAGACCAACCATGAAAGAAGCCCTCCAAGTGCTAGATAAAAGTATTTCTACAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0007154 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010029 GO:0010030 GO:0010035 GO:0010646 GO:0010647 GO:0016020 GO:0023051 GO:0023056 GO:0031668 GO:0033554 GO:0042221 GO:0042631 GO:0044464 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071944 GO:0104004 GO:1900140 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1905957 GO:1905959 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

768

Amino Acids

82.53

Weight (kDa)

6.08

Isoelectric Point (pI)

33.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	24 - 65	9.7e-14	Leucine rich repeat N-terminal domain
LRR_14	PF23598	93 - 182	4.7e-10	Leucine-rich repeat region
LRR_8	PF13855	101 - 160	4.4e-07	Leucine rich repeat
Pkinase	PF00069	462 - 605	4.3e-18	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	468 - 605	6.4e-19	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	658 - 758	5.5e-08	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011220)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15300 AT4G34220
fragaria_vesca	FvH4_2g05270
malus_domestica	MD05G1088500.v1.1 MD10G1096400.v1.1
prunus_persica	Prupe.8G134500_v2.0.a1
pyrus_communis	pycom05g08790 pycom10g08270
rosa_chinensis	RchiOBHm_Chr6g0255401
rosa_laevigata	RLG00000014841
rosa_multiflora	Rmu_co8383769.1_g000001 Rmu_sc0002360.1_g000015
rosa_roxburghii	Rroxscaffold_7G00210020
rosa_rugosa	Rorug05G0558100.1 Rorug05G0558200
rosa_samantha	Rh6AG075300 Rh6BG068400 Rh6CG068000 Rh6DG064700
rosa_wichuraiana	Rw6G006620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1625
Acc65I	GGTACC	1 cut(s)	1912
AccB1I	GGYRCC	3 cut(s)	1524, 1616, 1912
AccI	GTMKAC	5 cut(s)	256, 878, 1083, 1329, 2151
AciI	CCGC	9 cut(s)	834, 1125, 1445, 1821, 1881, 1953, 2093, 2106, 2240
AclI	AACGTT	1 cut(s)	1290
AclWI	GGATC	1 cut(s)	116
AcoI	YGGCCR	1 cut(s)	480
AcsI	RAATTY	2 cut(s)	727, 1531
AcuI	CTGAAG	5 cut(s)	300, 362, 434, 1385, 2190
AfaI	GTAC	4 cut(s)	107, 979, 1914, 2030
AfiI	CCNNNNNNNGG	9 cut(s)	999, 1062, 1332, 1504, 1521, 1534, 1925, 2020, 2140
AflIII	ACRYGT	2 cut(s)	222, 2025
AgeI	ACCGGT	1 cut(s)	1009
AjiI	CACGTC	2 cut(s)	2026, 2155
AjuI	GAANNNNNNNTTGG	6 cut(s)	317, 349, 760, 792, 880, 912
AloI	GAACNNNNNNTCC	2 cut(s)	291, 323
Alw21I	GWGCWC	2 cut(s)	8, 38
Alw26I	GTCTC	4 cut(s)	348, 1226, 1349, 2242
AlwI	GGATC	1 cut(s)	116
Ama87I	CYCGRG	3 cut(s)	1695, 1854, 1890
AoxI	GGCC	5 cut(s)	480, 1368, 1506, 1798, 2006
ApeKI	GCWGC	3 cut(s)	917, 1605, 1929
ApoI	RAATTY	2 cut(s)	727, 1531
AsiGI	ACCGGT	1 cut(s)	1009
Asp718I	GGTACC	1 cut(s)	1912
AspLEI	GCGC	4 cut(s)	657, 968, 1441, 2228
AspS9I	GGNCC	6 cut(s)	244, 764, 1397, 1506, 2095, 2103
AsuC2I	CCSGG	5 cut(s)	210, 773, 947, 1145, 2135
AsuHPI	GGTGA	7 cut(s)	425, 446, 1012, 1207, 1459, 1549, 2155
AsuNHI	GCTAGC	1 cut(s)	2089
AvaI	CYCGRG	3 cut(s)	1695, 1854, 1890
AvaII	GGWCC	5 cut(s)	244, 764, 1397, 2095, 2103
BanI	GGYRCC	3 cut(s)	1524, 1616, 1912
BanII	GRGCYC	2 cut(s)	8, 1891
BbsI	GAAGAC	1 cut(s)	1434
Bbv12I	GWGCWC	2 cut(s)	8, 38
BbvI	GCAGC	3 cut(s)	929, 1617, 1941
BccI	CCATC	9 cut(s)	74, 119, 318, 1064, 1204, 1226, 1659, 2113, 2140
BceAI	ACGGC	1 cut(s)	1452
BcgI	CGANNNNNNTGC	4 cut(s)	181, 215, 1256, 1290
BclI	TGATCA	2 cut(s)	1282, 1827
BcnI	CCSGG	5 cut(s)	210, 773, 947, 1145, 2135
BcoDI	GTCTC	4 cut(s)	348, 1226, 1349, 2242
BfaI	CTAG	9 cut(s)	53, 137, 1392, 1703, 2051, 2090, 2213, 2229, 2279
BfmI	CTRYAG	2 cut(s)	273, 525
BfoI	RGCGCY	1 cut(s)	1442
BfuAI	ACCTGC	1 cut(s)	1625
BglI	GCCNNNNNGGC	1 cut(s)	1614
BglII	AGATCT	1 cut(s)	595
BisI	GCNGC	5 cut(s)	835, 918, 1606, 1822, 1930
BlsI	GCNGC	5 cut(s)	836, 919, 1607, 1823, 1931
BmcAI	AGTACT	1 cut(s)	107
Bme1390I	CCNGG	5 cut(s)	210, 773, 947, 1145, 2135
Bme18I	GGWCC	5 cut(s)	244, 764, 1397, 2095, 2103
BmeT110I	CYCGRG	3 cut(s)	1695, 1854, 1890
BmgBI	CACGTC	2 cut(s)	2026, 2155
BmgT120I	GGNCC	6 cut(s)	244, 764, 1397, 1506, 2095, 2103
BmiI	GGNNCC	5 cut(s)	951, 1338, 1526, 1618, 1914
BmrFI	CCNGG	5 cut(s)	210, 773, 947, 1145, 2135
BmrI	ACTGGG	1 cut(s)	579
BmsI	GCATC	3 cut(s)	1190, 1221, 2179
BmtI	GCTAGC	1 cut(s)	2093
BmuI	ACTGGG	1 cut(s)	579
BpiI	GAAGAC	1 cut(s)	1434
BpmI	CTGGAG	2 cut(s)	891, 1373
BpuEI	CTTGAG	2 cut(s)	1367, 2023
BpuMI	CCSGG	5 cut(s)	210, 773, 947, 1145, 2135
BsaI	GGTCTC	2 cut(s)	348, 2242
BsaJI	CCNNGG	3 cut(s)	208, 1371, 1855
BsaWI	WCCGGW	4 cut(s)	410, 761, 1009, 1022
BsaXI	ACNNNNNCTCC	2 cut(s)	1452, 1482
Bsc4I	CCNNNNNNNGG	9 cut(s)	999, 1062, 1332, 1504, 1521, 1534, 1925, 2020, 2140
Bse118I	RCCGGY	4 cut(s)	962, 1009, 1613, 1925
Bse1I	ACTGG	4 cut(s)	559, 574, 1919, 2098
Bse3DI	GCAATG	4 cut(s)	1509, 1689, 1935, 2192
BseDI	CCNNGG	3 cut(s)	208, 1371, 1855
BseGI	GGATG	3 cut(s)	111, 163, 1710
BseLI	CCNNNNNNNGG	9 cut(s)	999, 1062, 1332, 1504, 1521, 1534, 1925, 2020, 2140
BseMI	GCAATG	4 cut(s)	1509, 1689, 1935, 2192
BseMII	CTCAG	8 cut(s)	90, 130, 363, 414, 527, 995, 1266, 1977
BseNI	ACTGG	4 cut(s)	559, 574, 1919, 2098
BseRI	GAGGAG	2 cut(s)	873, 1465
BseXI	GCAGC	3 cut(s)	929, 1617, 1941
BseYI	CCCAGC	1 cut(s)	1816
BshFI	GGCC	5 cut(s)	482, 1370, 1508, 1800, 2008
BshNI	GGYRCC	3 cut(s)	1524, 1616, 1912
BshTI	ACCGGT	1 cut(s)	1009
BsiHKAI	GWGCWC	2 cut(s)	8, 38
BsiHKCI	CYCGRG	3 cut(s)	1695, 1854, 1890
BslFI	GGGAC	4 cut(s)	476, 548, 1052, 2036
BslI	CCNNNNNNNGG	9 cut(s)	999, 1062, 1332, 1504, 1521, 1534, 1925, 2020, 2140
BsmAI	GTCTC	4 cut(s)	348, 1226, 1349, 2242
BsmBI	CGTCTC	1 cut(s)	1349
BsmFI	GGGAC	4 cut(s)	476, 548, 1052, 2036
BsnI	GGCC	5 cut(s)	482, 1370, 1508, 1800, 2008
Bso31I	GGTCTC	2 cut(s)	348, 2242
BsoBI	CYCGRG	3 cut(s)	1695, 1854, 1890
Bsp1286I	GDGCHC	3 cut(s)	8, 38, 1891
Bsp143I	GATC	8 cut(s)	121, 316, 436, 595, 739, 1100, 1282, 1827
BspACI	CCGC	9 cut(s)	834, 1125, 1445, 1821, 1881, 1953, 2093, 2106, 2240
BspANI	GGCC	5 cut(s)	482, 1370, 1508, 1800, 2008
BspCNI	CTCAG	8 cut(s)	89, 129, 364, 415, 528, 994, 1265, 1978
BspLI	GGNNCC	5 cut(s)	951, 1338, 1526, 1618, 1914
BspMI	ACCTGC	1 cut(s)	1625
BspOI	GCTAGC	1 cut(s)	2093
BspPI	GGATC	1 cut(s)	116
BspT107I	GGYRCC	3 cut(s)	1524, 1616, 1912
BspTNI	GGTCTC	2 cut(s)	348, 2242
BsrDI	GCAATG	4 cut(s)	1509, 1689, 1935, 2192
BsrFI	RCCGGY	4 cut(s)	962, 1009, 1613, 1925
BsrI	ACTGG	4 cut(s)	559, 574, 1919, 2098
BssAI	RCCGGY	4 cut(s)	962, 1009, 1613, 1925
BssECI	CCNNGG	3 cut(s)	208, 1371, 1855
BssMI	GATC	8 cut(s)	121, 316, 436, 595, 739, 1100, 1282, 1827
Bst4CI	ACNGT	6 cut(s)	526, 843, 977, 1259, 1327, 1621
Bst6I	CTCTTC	5 cut(s)	276, 607, 1091, 1224, 2240
BstAPI	GCANNNNNTGC	2 cut(s)	707, 1961
BstC8I	GCNNGC	9 cut(s)	96, 1316, 1443, 1615, 1927, 2091, 2110, 2114, 2199
BstDEI	CTNAG	9 cut(s)	76, 116, 372, 423, 536, 981, 1042, 1252, 1986
BstF5I	GGATG	3 cut(s)	111, 163, 1710
BstH2I	RGCGCY	1 cut(s)	1442
BstHHI	GCGC	4 cut(s)	657, 968, 1441, 2228
BstKTI	GATC	8 cut(s)	124, 319, 439, 598, 742, 1103, 1285, 1830
BstMAI	GTCTC	4 cut(s)	348, 1226, 1349, 2242
BstMBI	GATC	8 cut(s)	121, 316, 436, 595, 739, 1100, 1282, 1827
BstMWI	GCNNNNNNNGC	9 cut(s)	382, 707, 917, 1052, 1315, 1614, 1961, 2165, 2198
BstNSI	RCATGY	2 cut(s)	192, 226
BstSCI	CCNGG	5 cut(s)	208, 771, 945, 1143, 2133
BstSFI	CTRYAG	2 cut(s)	273, 525
BstV1I	GCAGC	3 cut(s)	929, 1617, 1941
BstV2I	GAAGAC	1 cut(s)	1434
BstX2I	RGATCY	1 cut(s)	595
BstXI	CCANNNNNNTGG	1 cut(s)	1203
BstYI	RGATCY	1 cut(s)	595
BsuRI	GGCC	5 cut(s)	482, 1370, 1508, 1800, 2008
BtrI	CACGTC	2 cut(s)	2026, 2155
BtsCI	GGATG	3 cut(s)	111, 163, 1710
BtsIMutI	CAGTG	5 cut(s)	124, 522, 552, 1264, 2105
BveI	ACCTGC	1 cut(s)	1625
Cac8I	GCNNGC	9 cut(s)	96, 1316, 1443, 1615, 1927, 2091, 2110, 2114, 2199
CfoI	GCGC	4 cut(s)	657, 968, 1441, 2228
Cfr10I	RCCGGY	4 cut(s)	962, 1009, 1613, 1925
Cfr13I	GGNCC	6 cut(s)	244, 764, 1397, 1506, 2095, 2103
Csp6I	GTAC	4 cut(s)	106, 978, 1913, 2029
CspAI	ACCGGT	1 cut(s)	1009
CspCI	CAANNNNNGTGG	2 cut(s)	1825, 1860
CviAII	CATG	9 cut(s)	174, 189, 223, 1203, 1209, 1274, 1733, 1825, 2257
CviQI	GTAC	4 cut(s)	106, 978, 1913, 2029
DdeI	CTNAG	9 cut(s)	76, 116, 372, 423, 536, 981, 1042, 1252, 1986
DpnI	GATC	8 cut(s)	123, 318, 438, 597, 741, 1102, 1284, 1829
DpnII	GATC	8 cut(s)	121, 316, 436, 595, 739, 1100, 1282, 1827
EaeI	YGGCCR	1 cut(s)	480
Eam1104I	CTCTTC	5 cut(s)	276, 607, 1091, 1224, 2240
EarI	CTCTTC	5 cut(s)	276, 607, 1091, 1224, 2240
Ecl136II	GAGCTC	1 cut(s)	6
Eco147I	AGGCCT	1 cut(s)	1370
Eco24I	GRGCYC	2 cut(s)	8, 1891
Eco31I	GGTCTC	2 cut(s)	348, 2242
Eco47I	GGWCC	5 cut(s)	244, 764, 1397, 2095, 2103
Eco53kI	GAGCTC	1 cut(s)	6
Eco57I	CTGAAG	5 cut(s)	300, 362, 434, 1385, 2190
Eco88I	CYCGRG	3 cut(s)	1695, 1854, 1890
EcoICRI	GAGCTC	1 cut(s)	6
EcoT22I	ATGCAT	2 cut(s)	1214, 2194
EcoT38I	GRGCYC	2 cut(s)	8, 1891
Esp3I	CGTCTC	1 cut(s)	1349
FaeI	CATG	9 cut(s)	177, 192, 226, 1206, 1212, 1277, 1736, 1828, 2260
FaqI	GGGAC	4 cut(s)	476, 548, 1052, 2036
FatI	CATG	9 cut(s)	173, 188, 222, 1202, 1208, 1273, 1732, 1824, 2256
FbaI	TGATCA	2 cut(s)	1282, 1827
FblI	GTMKAC	5 cut(s)	256, 878, 1083, 1329, 2151
Fnu4HI	GCNGC	5 cut(s)	835, 918, 1606, 1822, 1930
FokI	GGATG	3 cut(s)	98, 170, 1697
FriOI	GRGCYC	2 cut(s)	8, 1891
Fsp4HI	GCNGC	5 cut(s)	835, 918, 1606, 1822, 1930
FspBI	CTAG	9 cut(s)	53, 137, 1392, 1703, 2051, 2090, 2213, 2229, 2279
GlaI	GCGC	4 cut(s)	656, 967, 1440, 2227
GluI	GCNGC	5 cut(s)	835, 918, 1606, 1822, 1930
GsaI	CCCAGC	1 cut(s)	1820
GsuI	CTGGAG	2 cut(s)	891, 1373
HaeII	RGCGCY	1 cut(s)	1442
HaeIII	GGCC	5 cut(s)	482, 1370, 1508, 1800, 2008
HhaI	GCGC	4 cut(s)	657, 968, 1441, 2228
Hin1II	CATG	9 cut(s)	177, 192, 226, 1206, 1212, 1277, 1736, 1828, 2260
Hin6I	GCGC	4 cut(s)	655, 966, 1439, 2226
HinP1I	GCGC	4 cut(s)	655, 966, 1439, 2226
HincII	GTYRAC	2 cut(s)	1624, 2152
HindII	GTYRAC	2 cut(s)	1624, 2152
HindIII	AAGCTT	3 cut(s)	238, 783, 1574
HinfI	GANTC	8 cut(s)	183, 231, 425, 776, 850, 938, 1988, 2161
HpaI	GTTAAC	1 cut(s)	1624
HphI	GGTGA	7 cut(s)	425, 446, 1012, 1207, 1459, 1549, 2155
Hpy166II	GTNNAC	9 cut(s)	257, 827, 879, 1084, 1330, 1624, 2029, 2103, 2152
Hpy188III	TCNNGA	6 cut(s)	314, 422, 632, 1093, 1492, 1892
Hpy8I	GTNNAC	9 cut(s)	257, 827, 879, 1084, 1330, 1624, 2029, 2103, 2152
Hpy99I	CGWCG	1 cut(s)	2156
HpyAV	CCTTC	6 cut(s)	69, 458, 757, 876, 1360, 1889
HpyCH4III	ACNGT	6 cut(s)	526, 843, 977, 1259, 1327, 1621
HpyCH4IV	ACGT	6 cut(s)	1080, 1290, 1358, 1728, 2025, 2154
HpyF10VI	GCNNNNNNNGC	9 cut(s)	382, 707, 917, 1052, 1315, 1614, 1961, 2165, 2198
HpyF3I	CTNAG	9 cut(s)	76, 116, 372, 423, 536, 981, 1042, 1252, 1986
HpySE526I	ACGT	6 cut(s)	1080, 1290, 1358, 1728, 2025, 2154
Hsp92II	CATG	9 cut(s)	177, 192, 226, 1206, 1212, 1277, 1736, 1828, 2260
HspAI	GCGC	4 cut(s)	655, 966, 1439, 2226
KpnI	GGTACC	1 cut(s)	1916
KroI	GCCGGC	2 cut(s)	1613, 1925
KroNI	GCCGGC	2 cut(s)	1615, 1927
Ksp22I	TGATCA	2 cut(s)	1282, 1827
KspAI	GTTAAC	1 cut(s)	1624
Kzo9I	GATC	8 cut(s)	121, 316, 436, 595, 739, 1100, 1282, 1827
LmnI	GCTCC	6 cut(s)	11, 41, 795, 1336, 1342, 2086
Lsp1109I	GCAGC	3 cut(s)	929, 1617, 1941
LweI	GCATC	3 cut(s)	1190, 1221, 2179
MaeI	CTAG	9 cut(s)	53, 137, 1392, 1703, 2051, 2090, 2213, 2229, 2279
MaeII	ACGT	6 cut(s)	1080, 1290, 1358, 1728, 2025, 2154
MaeIII	GTNAC	8 cut(s)	66, 184, 232, 892, 1012, 1165, 1259, 1832
MalI	GATC	8 cut(s)	123, 318, 438, 597, 741, 1102, 1284, 1829
MboI	GATC	8 cut(s)	121, 316, 436, 595, 739, 1100, 1282, 1827
MflI	RGATCY	1 cut(s)	595
MhlI	GDGCHC	3 cut(s)	8, 38, 1891
MluCI	AATT	5 cut(s)	328, 577, 727, 861, 1531
MlyI	GAGTC	5 cut(s)	192, 240, 434, 932, 1997
MmeI	TCCRAC	3 cut(s)	348, 492, 1273
Mph1103I	ATGCAT	2 cut(s)	1214, 2194
MroNI	GCCGGC	2 cut(s)	1613, 1925
MseI	TTAA	4 cut(s)	662, 758, 1623, 1902
MslI	CAYNNNNRTG	3 cut(s)	1201, 1207, 1278
MspA1I	CMGCKG	1 cut(s)	2108
MspR9I	CCNGG	5 cut(s)	210, 773, 947, 1145, 2135
MwoI	GCNNNNNNNGC	9 cut(s)	382, 707, 917, 1052, 1315, 1614, 1961, 2165, 2198
NaeI	GCCGGC	2 cut(s)	1615, 1927
NciI	CCSGG	5 cut(s)	210, 773, 947, 1145, 2135
NdeII	GATC	8 cut(s)	121, 316, 436, 595, 739, 1100, 1282, 1827
NgoMIV	GCCGGC	2 cut(s)	1613, 1925
NheI	GCTAGC	1 cut(s)	2089
NlaIII	CATG	9 cut(s)	177, 192, 226, 1206, 1212, 1277, 1736, 1828, 2260
NlaIV	GGNNCC	5 cut(s)	951, 1338, 1526, 1618, 1914
NmeAIII	GCCGAG	1 cut(s)	1352
NmuCI	GTSAC	8 cut(s)	66, 184, 232, 892, 1012, 1165, 1259, 1832
NsiI	ATGCAT	2 cut(s)	1214, 2194
NspI	RCATGY	2 cut(s)	192, 226
PaeR7I	CTCGAG	1 cut(s)	1890
PceI	AGGCCT	1 cut(s)	1370
PciI	ACATGT	1 cut(s)	222
PcsI	WCGNNNNNNNCGW	1 cut(s)	1617
PdiI	GCCGGC	2 cut(s)	1615, 1927
PfeI	GAWTC	3 cut(s)	776, 850, 2161
PflFI	GACNNNGTC	1 cut(s)	1163
PfoI	TCCNGGA	1 cut(s)	771
PinAI	ACCGGT	1 cut(s)	1009
PkrI	GCNGC	5 cut(s)	836, 919, 1607, 1823, 1931
PleI	GAGTC	5 cut(s)	191, 239, 433, 932, 1996
PpsI	GAGTC	5 cut(s)	191, 239, 433, 932, 1996
PscI	ACATGT	1 cut(s)	222
Psp124BI	GAGCTC	1 cut(s)	8
Psp1406I	AACGTT	1 cut(s)	1290
PspFI	CCCAGC	1 cut(s)	1816
PspN4I	GGNNCC	5 cut(s)	951, 1338, 1526, 1618, 1914
PspPI	GGNCC	6 cut(s)	244, 764, 1397, 1506, 2095, 2103
PsuI	RGATCY	1 cut(s)	595
PsyI	GACNNNGTC	1 cut(s)	1163
RsaI	GTAC	4 cut(s)	107, 979, 1914, 2030
RsaNI	GTAC	4 cut(s)	106, 978, 1913, 2029
RseI	CAYNNNNRTG	3 cut(s)	1201, 1207, 1278
SacI	GAGCTC	1 cut(s)	8
SalI	GTCGAC	1 cut(s)	2150
SaqAI	TTAA	4 cut(s)	662, 758, 1623, 1902
SatI	GCNGC	5 cut(s)	835, 918, 1606, 1822, 1930
Sau3AI	GATC	8 cut(s)	121, 316, 436, 595, 739, 1100, 1282, 1827
Sau96I	GGNCC	6 cut(s)	244, 764, 1397, 1506, 2095, 2103
ScaI	AGTACT	1 cut(s)	107
SchI	GAGTC	5 cut(s)	192, 240, 434, 932, 1997
ScrFI	CCNGG	5 cut(s)	210, 773, 947, 1145, 2135
SduI	GDGCHC	3 cut(s)	8, 38, 1891
SfaNI	GCATC	3 cut(s)	1190, 1221, 2179
SfcI	CTRYAG	2 cut(s)	273, 525
Sfr274I	CTCGAG	1 cut(s)	1890
SinI	GGWCC	5 cut(s)	244, 764, 1397, 2095, 2103
SlaI	CTCGAG	1 cut(s)	1890
SmiMI	CAYNNNNRTG	3 cut(s)	1201, 1207, 1278
SmlI	CTYRAG	3 cut(s)	1346, 1890, 2002
SmoI	CTYRAG	3 cut(s)	1346, 1890, 2002
Sse9I	AATT	5 cut(s)	328, 577, 727, 861, 1531
SseBI	AGGCCT	1 cut(s)	1370
SsiI	CCGC	9 cut(s)	834, 1125, 1445, 1821, 1881, 1953, 2093, 2106, 2240
SspMI	CTAG	9 cut(s)	53, 137, 1392, 1703, 2051, 2090, 2213, 2229, 2279
SstI	GAGCTC	1 cut(s)	8
StuI	AGGCCT	1 cut(s)	1370
StyD4I	CCNGG	5 cut(s)	208, 771, 945, 1143, 2133
TaaI	ACNGT	6 cut(s)	526, 843, 977, 1259, 1327, 1621
TaiI	ACGT	6 cut(s)	1083, 1293, 1361, 1731, 2028, 2157
TaqI	TCGA	5 cut(s)	936, 1491, 1776, 1891, 2151
TasI	AATT	5 cut(s)	328, 577, 727, 861, 1531
TatI	WGTACW	2 cut(s)	105, 2028
TauI	GCSGC	2 cut(s)	837, 1824
TfiI	GAWTC	3 cut(s)	776, 850, 2161
Tru1I	TTAA	4 cut(s)	662, 758, 1623, 1902
Tru9I	TTAA	4 cut(s)	662, 758, 1623, 1902
TscAI	CASTG	5 cut(s)	124, 529, 559, 1264, 2105
TseFI	GTSAC	8 cut(s)	66, 184, 232, 892, 1012, 1165, 1259, 1832
TseI	GCWGC	3 cut(s)	917, 1605, 1929
Tsp45I	GTSAC	8 cut(s)	66, 184, 232, 892, 1012, 1165, 1259, 1832
TspDTI	ATGAA	8 cut(s)	51, 162, 174, 888, 1119, 1629, 1920, 2273
TspGWI	ACGGA	1 cut(s)	571
TspRI	CASTG	5 cut(s)	124, 529, 559, 1264, 2105
Tth111I	GACNNNGTC	1 cut(s)	1163
VpaK11BI	GGWCC	5 cut(s)	244, 764, 1397, 2095, 2103
XapI	RAATTY	2 cut(s)	727, 1531
XceI	RCATGY	2 cut(s)	192, 226
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1063, 2105
XhoI	CTCGAG	1 cut(s)	1890
XmiI	GTMKAC	5 cut(s)	256, 878, 1083, 1329, 2151
XspI	CTAG	9 cut(s)	53, 137, 1392, 1703, 2051, 2090, 2213, 2229, 2279
ZrmI	AGTACT	1 cut(s)	107
Zsp2I	ATGCAT	2 cut(s)	1214, 2194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.