Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0011220

Physical Location & Seq

Genomic Coordinates Reverse (-)

74740383 .. 74742770

Gene Structure 2388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0558200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGAACCCAAGAAAGCTTCTTGCTTTCTTCTTCTTCTTCTTCCTCCGCCGCTTCTCCTCCGCCGCCGCCGAGAACCTCAGCTTCGACTTCCCCTCCTTCAACTTCCGCAACCTCACCTTCCTCGGCTCCTCCCACATCCGCAACGGCGTCGTCGGCCTCACCCGCGACCTCCCCGTCCCCACCTCCTCCGCCGGCTCCGTCCTCTACAACTCCCCTATCCGCTTCTTCGACCCCGACTCCAACACCACCGCCTCCTTCTCCACCCGCTTCACCTTCTCCTTCTCCAACCTCAACCCCTCCTCCTCCTCCTCCGGCGACGGCATGTCGTTTTTCCTCTCCCCCAACAACCAGACCCTCGGCAGCTCCGGCGCCTACCTGGGCCTCCTCAACTCCTCCCTCCCCACCCACAACCACTTCATCGCCGTCGAATTCGACACCCGGCAAGATACCCACTTTTCCGACCCGAACGACAACCACGTCGGTCTTGACATCGACACCTTGACCTCCATCAAGACCGCCGACCCCATTGACCAAGATGTTGACTTGAAGAGCGGGACGGCGATCACGGCCTGGATTGACTACAAGAACGACCAAGAAACCCTTAAGGTGTACCTGAGTTACTCCGGGTTCAAACCCGAGACCCCTGTTTTGAACGTGGGGATTGATCTTTCCGGGTATCTGAAGGAGGTTATGTATGTGGGTTTCTCTGCTTCCACTGAGGGAAGCACTGAGCTTCATGAGATTGAGAATTGGAGCTTCAGGACATCTGGGTTTGTGCCGAAAAGGCCCACATTGCATCCTCACAATGTGTCTGATACTTATGTGATTGTCAGTCCAAGGCTGCCGGCGCCGGAGAAGGGACACAAGAGGCGGCTGGGGCTGGGGCTTGGGATTGCCGGGCCGGCCTTCTTTTGTGTTGCGCTGGTGGTTTTCGGGTATGTGAGTGTGAGGAAGTGGAGGGAGGTGAGGAGGGTGAAGAGTTTTAAAGCAGAGGTGGTGGCAGGGCCGAGGCAGTTTAGCTATAGAGAGCTGAGGGCGGCTACAGGAGGGTTTCATGGGAGTAGGATTATTGGGCATGGTGCATTTGGGACTGTGTACAAGGCGTTTTTCGTGGCGTCGGGGACTATTGCGGCGGTGAAGAGGTCCAGGCATTCTCATGAAGGGAAGACTGAGTTTCTTGCTGAGTTGTCTATTATAGCTTGCTTGAGGCACAAGAATTTAGTGCATTTGCAAGGGTGGTGTGTTGAGAAAGGTGAGTTGCTGCTTGTGTATGATTTCATGCCTAATGGTAGTCTTGAGAGAGTGCTTTACCAAGAAAGTGAGGAAGGGAACTTGTTGGATTGGCCTCATAGGCAAAATGTTGCGATTGGTTTGGCGTCTGTTTTGACGTATATGCATCAAGAATGTGAGCAGCAAGTGATTCATAGGGATATTAAGACTGGTAATGTGTTGCTGGATGGGAATTTCAATGCAAAGCTTGGTGATTTTGGATTGGCAAAGCTCATGGATCATGATAAGAGCCCTGTTTCGACGCTGACAGCTGGAACAATGGGGTACCTTGCGCCCGAGTATCTTCAGTATGGGAAAGCAACTGAGAAGACTGATGCTTTCAGCTATGGTGTGGTTATACTTGAATTGGCTTGTGGGAGGAGACCAATTGAGAGAATTCCGGATTGTCACAAAATGGTGAATTTGGTTGATTGGGTTTGGGGACTGCATTCTGAAGGAAGGATTATTGATGCAGCTGATCAGAGGTTGGCTGGGGAGTTTGATGTGGAAGAAATGCGGAAGCTGTTGCTTGTCGGTTTGAGTTGTGCTAACCCAGATAGCTCCAAGAGGCCTACAATGAGGAGAGTTCTACAAATCTTGAGTAATGAGGCAGAACCTCCAGCTGTGCCGAGGGTTAAGCCAAGTCTCAGTTTCTCTTGTGGCGTGTCTTTGTCTGTCGATGACATTGTTTCAGATTGTGATGGCAGCCTCACCAGCTCAATGTGCGAGATTGTTGTCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0007154 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010029 GO:0010030 GO:0010035 GO:0010646 GO:0010647 GO:0016020 GO:0023051 GO:0023056 GO:0031668 GO:0033554 GO:0042221 GO:0042631 GO:0044464 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071944 GO:0104004 GO:1900140 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1905957 GO:1905959 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

670

Amino Acids

74.11

Weight (kDa)

6.41

Isoelectric Point (pI)

41.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	26 - 261	1.3e-65	Legume lectin domain
Lectin_L-type_dom	PF18483	47 - 249	3.1e-13	Legume lectin beta-barrel domain
Pkinase	PF00069	352 - 621	1.4e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	355 - 621	1e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011220)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15300 AT4G34220
fragaria_vesca	FvH4_2g05270
malus_domestica	MD05G1088500.v1.1 MD10G1096400.v1.1
prunus_persica	Prupe.8G134500_v2.0.a1
pyrus_communis	pycom05g08790 pycom10g08270
rosa_chinensis	RchiOBHm_Chr6g0255401
rosa_laevigata	RLG00000014841
rosa_multiflora	Rmu_co8383769.1_g000001 Rmu_sc0002360.1_g000015
rosa_roxburghii	Rroxscaffold_7G00210020
rosa_rugosa	Rorug05G0558100.1 Rorug05G0558200
rosa_samantha	Rh6AG075300 Rh6BG068400 Rh6CG068000 Rh6DG064700
rosa_wichuraiana	Rw6G006620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	173, 476
Acc65I	GGTACC	1 cut(s)	1554
AccB1I	GGYRCC	3 cut(s)	368, 847, 1554
AccBSI	CCGCTC	1 cut(s)	552
AccII	CGCG	1 cut(s)	165
AccIII	TCCGGA	1 cut(s)	1669
AclWI	GGATC	1 cut(s)	1515
AcsI	RAATTY	5 cut(s)	428, 1216, 1462, 1665, 1690
AcuI	CTGAAG	4 cut(s)	701, 742, 1559, 1743
AcyI	GRCGYC	5 cut(s)	147, 369, 848, 1115, 1376
AdeI	CACNNNGTG	1 cut(s)	808
AfaI	GTAC	3 cut(s)	611, 1097, 1556
AfiI	CCNNNNNNNGG	1 cut(s)	857
AflII	CTTAAG	1 cut(s)	602
AgsI	TTSAA	6 cut(s)	100, 547, 631, 652, 1468, 1634
AhdI	GACNNNNNGTC	1 cut(s)	322
AjiI	CACGTC	1 cut(s)	478
AjnI	CCWGG	3 cut(s)	375, 569, 1145
Alw26I	GTCTC	3 cut(s)	632, 1645, 1919
AlwI	GGATC	1 cut(s)	1515
Ama87I	CYCGRG	2 cut(s)	635, 1565
Aor13HI	TCCGGA	1 cut(s)	1669
AoxI	GGCC	9 cut(s)	154, 379, 567, 785, 899, 903, 1004, 1343, 1838
ApeKI	GCWGC	6 cut(s)	360, 841, 1261, 1411, 1742, 1974
ApoI	RAATTY	5 cut(s)	428, 1216, 1462, 1665, 1690
ArsI	GACNNNNNNTTYG	2 cut(s)	631, 663
Asp718I	GGTACC	1 cut(s)	1554
AspLEI	GCGC	4 cut(s)	371, 850, 922, 1564
AspS9I	GGNCC	5 cut(s)	379, 786, 899, 1004, 1143
AsuC2I	CCSGG	4 cut(s)	439, 625, 673, 898
AvaI	CYCGRG	2 cut(s)	635, 1565
AvaII	GGWCC	1 cut(s)	1143
BaeI	ACNNNNGTAYC	2 cut(s)	807, 840
BanI	GGYRCC	3 cut(s)	368, 847, 1554
BanII	GRGCYC	1 cut(s)	1523
BbsI	GAAGAC	2 cut(s)	1172, 1604
BbvCI	CCTCAGC	2 cut(s)	77, 1031
BbvI	GCAGC	6 cut(s)	372, 828, 1248, 1423, 1754, 1986
BccI	CCATC	3 cut(s)	515, 1451, 1964
BceAI	ACGGC	5 cut(s)	160, 334, 407, 573, 582
BcgI	CGANNNNNNTGC	2 cut(s)	130, 164
BciT130I	CCWGG	3 cut(s)	377, 571, 1147
BclI	TGATCA	1 cut(s)	1747
BcnI	CCSGG	4 cut(s)	439, 625, 673, 898
BcoDI	GTCTC	3 cut(s)	632, 1645, 1919
BfmI	CTRYAG	2 cut(s)	1021, 1041
BfoI	RGCGCY	2 cut(s)	372, 851
BfrI	CTTAAG	1 cut(s)	602
BglI	GCCNNNNNGGC	3 cut(s)	784, 902, 1351
Bme1390I	CCNGG	7 cut(s)	377, 439, 571, 625, 673, 898, 1147
Bme18I	GGWCC	1 cut(s)	1143
BmeRI	GACNNNNNGTC	1 cut(s)	322
BmeT110I	CYCGRG	2 cut(s)	635, 1565
BmgBI	CACGTC	1 cut(s)	478
BmgT120I	GGNCC	5 cut(s)	379, 786, 899, 1004, 1143
BmiI	GGNNCC	5 cut(s)	127, 196, 370, 849, 1556
BmrFI	CCNGG	7 cut(s)	377, 439, 571, 625, 673, 898, 1147
BmsI	GCATC	4 cut(s)	805, 1405, 1594, 1729
BpiI	GAAGAC	2 cut(s)	1172, 1604
BpmI	CTGGAG	1 cut(s)	1872
Bpu10I	CCTNAGC	2 cut(s)	77, 1031
BpuEI	CTTGAG	3 cut(s)	1225, 1316, 1888
BpuMI	CCSGG	4 cut(s)	439, 625, 673, 898
BsaHI	GRCGYC	5 cut(s)	147, 369, 848, 1115, 1376
BsaI	GGTCTC	2 cut(s)	632, 1645
BsaJI	CCNNGG	6 cut(s)	121, 355, 376, 836, 1007, 1898
BsaWI	WCCGGW	1 cut(s)	1669
BsaXI	ACNNNNNCTCC	8 cut(s)	77, 107, 221, 251, 284, 314, 677, 707
Bsc4I	CCNNNNNNNGG	1 cut(s)	857
Bse118I	RCCGGY	3 cut(s)	191, 844, 901
Bse1I	ACTGG	1 cut(s)	1444
Bse3DI	GCAATG	1 cut(s)	791
BseAI	TCCGGA	1 cut(s)	1669
BseBI	CCWGG	3 cut(s)	377, 571, 1147
BseDI	CCNNGG	6 cut(s)	121, 355, 376, 836, 1007, 1898
BseGI	GGATG	3 cut(s)	135, 796, 1462
BseLI	CCNNNNNNNGG	1 cut(s)	857
BseMI	GCAATG	1 cut(s)	791
BseMII	CTCAG	9 cut(s)	91, 605, 708, 720, 1022, 1161, 1173, 1584, 1930
BseNI	ACTGG	1 cut(s)	1444
BseXI	GCAGC	6 cut(s)	372, 828, 1248, 1423, 1754, 1986
BseYI	CCCAGC	3 cut(s)	874, 880, 1760
Bsh1236I	CGCG	1 cut(s)	165
BshFI	GGCC	9 cut(s)	156, 381, 569, 787, 901, 905, 1006, 1345, 1840
BshNI	GGYRCC	3 cut(s)	368, 847, 1554
BsiHKCI	CYCGRG	2 cut(s)	635, 1565
BslFI	GGGAC	6 cut(s)	161, 568, 873, 1102, 1135, 1725
BslI	CCNNNNNNNGG	1 cut(s)	857
BsmAI	GTCTC	3 cut(s)	632, 1645, 1919
BsmFI	GGGAC	6 cut(s)	161, 568, 873, 1102, 1135, 1725
BsmI	GAATGC	2 cut(s)	1150, 1717
BsnI	GGCC	9 cut(s)	156, 381, 569, 787, 901, 905, 1006, 1345, 1840
Bso31I	GGTCTC	2 cut(s)	632, 1645
BsoBI	CYCGRG	2 cut(s)	635, 1565
Bsp1286I	GDGCHC	1 cut(s)	1523
Bsp13I	TCCGGA	1 cut(s)	1669
Bsp1407I	TGTACA	1 cut(s)	1095
Bsp143I	GATC	4 cut(s)	561, 664, 1507, 1747
BspANI	GGCC	9 cut(s)	156, 381, 569, 787, 901, 905, 1006, 1345, 1840
BspCNI	CTCAG	9 cut(s)	90, 606, 709, 721, 1023, 1162, 1174, 1585, 1929
BspEI	TCCGGA	1 cut(s)	1669
BspFNI	CGCG	1 cut(s)	165
BspHI	TCATGA	3 cut(s)	736, 1156, 1510
BspLI	GGNNCC	5 cut(s)	127, 196, 370, 849, 1556
BspPI	GGATC	1 cut(s)	1515
BspQI	GCTCTTC	1 cut(s)	542
BspT107I	GGYRCC	3 cut(s)	368, 847, 1554
BspTI	CTTAAG	1 cut(s)	602
BspTNI	GGTCTC	2 cut(s)	632, 1645
BsrBI	CCGCTC	1 cut(s)	552
BsrDI	GCAATG	1 cut(s)	791
BsrFI	RCCGGY	3 cut(s)	191, 844, 901
BsrGI	TGTACA	1 cut(s)	1095
BsrI	ACTGG	1 cut(s)	1444
BssAI	RCCGGY	3 cut(s)	191, 844, 901
BssECI	CCNNGG	6 cut(s)	121, 355, 376, 836, 1007, 1898
BssMI	GATC	4 cut(s)	561, 664, 1507, 1747
BssNI	GRCGYC	5 cut(s)	147, 369, 848, 1115, 1376
BssT1I	CCWWGG	1 cut(s)	836
Bst2UI	CCWGG	3 cut(s)	377, 571, 1147
Bst4CI	ACNGT	1 cut(s)	1093
Bst6I	CTCTTC	3 cut(s)	542, 971, 1133
BstACI	GRCGYC	5 cut(s)	147, 369, 848, 1115, 1376
BstAFI	CTTAAG	1 cut(s)	602
BstAUI	TGTACA	1 cut(s)	1095
BstC8I	GCNNGC	4 cut(s)	193, 846, 903, 1201
BstDEI	CTNAG	9 cut(s)	77, 614, 717, 729, 1031, 1170, 1182, 1593, 1916
BstF5I	GGATG	3 cut(s)	135, 796, 1462
BstFNI	CGCG	1 cut(s)	165
BstH2I	RGCGCY	2 cut(s)	372, 851
BstHHI	GCGC	4 cut(s)	371, 850, 922, 1564
BstKTI	GATC	4 cut(s)	564, 667, 1510, 1750
BstMAI	GTCTC	3 cut(s)	632, 1645, 1919
BstMBI	GATC	4 cut(s)	561, 664, 1507, 1747
BstNI	CCWGG	3 cut(s)	377, 571, 1147
BstNSI	RCATGY	1 cut(s)	325
BstSCI	CCNGG	7 cut(s)	375, 437, 569, 623, 671, 896, 1145
BstSFI	CTRYAG	2 cut(s)	1021, 1041
BstUI	CGCG	1 cut(s)	165
BstV1I	GCAGC	6 cut(s)	372, 828, 1248, 1423, 1754, 1986
BstV2I	GAAGAC	2 cut(s)	1172, 1604
BsuRI	GGCC	9 cut(s)	156, 381, 569, 787, 901, 905, 1006, 1345, 1840
BtgZI	GCGATG	1 cut(s)	403
BtrI	CACGTC	1 cut(s)	478
BtsCI	GGATG	3 cut(s)	135, 796, 1462
BtsIMutI	CAGTG	2 cut(s)	714, 726
Cac8I	GCNNGC	4 cut(s)	193, 846, 903, 1201
CciI	TCATGA	3 cut(s)	736, 1156, 1510
CfoI	GCGC	4 cut(s)	371, 850, 922, 1564
Cfr10I	RCCGGY	3 cut(s)	191, 844, 901
Cfr13I	GGNCC	5 cut(s)	379, 786, 899, 1004, 1143
CseI	GACGC	4 cut(s)	136, 1104, 1365, 1540
Csp6I	GTAC	3 cut(s)	610, 1096, 1555
CviAII	CATG	8 cut(s)	322, 737, 1055, 1076, 1157, 1279, 1504, 1511
CviQI	GTAC	3 cut(s)	610, 1096, 1555
DdeI	CTNAG	9 cut(s)	77, 614, 717, 729, 1031, 1170, 1182, 1593, 1916
DinI	GGCGCC	2 cut(s)	370, 849
DpnI	GATC	4 cut(s)	563, 666, 1509, 1749
DpnII	GATC	4 cut(s)	561, 664, 1507, 1747
DraI	TTTAAA	1 cut(s)	985
DraIII	CACNNNGTG	1 cut(s)	808
DrdI	GACNNNNNNGTC	2 cut(s)	173, 476
DriI	GACNNNNNGTC	1 cut(s)	322
DseDI	GACNNNNNNGTC	2 cut(s)	173, 476
Eam1104I	CTCTTC	3 cut(s)	542, 971, 1133
Eam1105I	GACNNNNNGTC	1 cut(s)	322
EarI	CTCTTC	3 cut(s)	542, 971, 1133
EciI	GGCGGA	3 cut(s)	35, 49, 178
Eco130I	CCWWGG	1 cut(s)	836
Eco147I	AGGCCT	1 cut(s)	1840
Eco24I	GRGCYC	1 cut(s)	1523
Eco31I	GGTCTC	2 cut(s)	632, 1645
Eco47I	GGWCC	1 cut(s)	1143
Eco57I	CTGAAG	4 cut(s)	701, 742, 1559, 1743
Eco88I	CYCGRG	2 cut(s)	635, 1565
EcoRI	GAATTC	2 cut(s)	428, 1665
EcoRII	CCWGG	3 cut(s)	375, 569, 1145
EcoT14I	CCWWGG	1 cut(s)	836
EcoT22I	ATGCAT	1 cut(s)	1398
EcoT38I	GRGCYC	1 cut(s)	1523
EgeI	GGCGCC	2 cut(s)	370, 849
EheI	GGCGCC	2 cut(s)	370, 849
ErhI	CCWWGG	1 cut(s)	836
FaeI	CATG	8 cut(s)	325, 740, 1058, 1079, 1160, 1282, 1507, 1514
FalI	AAGNNNNNCTT	2 cut(s)	585, 617
FaqI	GGGAC	6 cut(s)	161, 568, 873, 1102, 1135, 1725
FatI	CATG	8 cut(s)	321, 736, 1054, 1075, 1156, 1278, 1503, 1510
FauI	CCCGC	3 cut(s)	170, 272, 545
FbaI	TGATCA	1 cut(s)	1747
FokI	GGATG	3 cut(s)	122, 783, 1469
FriOI	GRGCYC	1 cut(s)	1523
FseI	GGCCGGCC	1 cut(s)	905
GlaI	GCGC	4 cut(s)	370, 849, 921, 1563
GsaI	CCCAGC	3 cut(s)	878, 884, 1764
GsuI	CTGGAG	1 cut(s)	1872
HaeII	RGCGCY	2 cut(s)	372, 851
HaeIII	GGCC	9 cut(s)	156, 381, 569, 787, 901, 905, 1006, 1345, 1840
HgaI	GACGC	4 cut(s)	136, 1104, 1365, 1540
HhaI	GCGC	4 cut(s)	371, 850, 922, 1564
Hin1I	GRCGYC	5 cut(s)	147, 369, 848, 1115, 1376
Hin1II	CATG	8 cut(s)	325, 740, 1058, 1079, 1160, 1282, 1507, 1514
Hin6I	GCGC	4 cut(s)	369, 848, 920, 1562
HinP1I	GCGC	4 cut(s)	369, 848, 920, 1562
HincII	GTYRAC	2 cut(s)	541, 2008
HindII	GTYRAC	2 cut(s)	541, 2008
HindIII	AAGCTT	2 cut(s)	14, 1475
HinfI	GANTC	2 cut(s)	236, 1420
Hpy166II	GTNNAC	4 cut(s)	541, 610, 1096, 2008
Hpy188I	TCNGA	6 cut(s)	460, 681, 814, 1723, 1752, 1963
Hpy8I	GTNNAC	4 cut(s)	541, 610, 1096, 2008
Hpy99I	CGWCG	7 cut(s)	152, 155, 320, 428, 482, 1120, 1534
HpyCH4III	ACNGT	1 cut(s)	1093
HpyCH4IV	ACGT	3 cut(s)	477, 654, 1388
HpyCH4V	TGCA	8 cut(s)	796, 1082, 1225, 1231, 1396, 1472, 1717, 1742
HpyF3I	CTNAG	9 cut(s)	77, 614, 717, 729, 1031, 1170, 1182, 1593, 1916
HpySE526I	ACGT	3 cut(s)	477, 654, 1388
Hsp92I	GRCGYC	5 cut(s)	147, 369, 848, 1115, 1376
Hsp92II	CATG	8 cut(s)	325, 740, 1058, 1079, 1160, 1282, 1507, 1514
HspAI	GCGC	4 cut(s)	369, 848, 920, 1562
KasI	GGCGCC	2 cut(s)	368, 847
Kpn2I	TCCGGA	1 cut(s)	1669
KpnI	GGTACC	1 cut(s)	1558
KroI	GCCGGC	3 cut(s)	191, 844, 901
KroNI	GCCGGC	3 cut(s)	193, 846, 903
Ksp22I	TGATCA	1 cut(s)	1747
Kzo9I	GATC	4 cut(s)	561, 664, 1507, 1747
LguI	GCTCTTC	1 cut(s)	542
LmnI	GCTCC	5 cut(s)	131, 200, 368, 753, 1835
Lsp1109I	GCAGC	6 cut(s)	372, 828, 1248, 1423, 1754, 1986
LweI	GCATC	4 cut(s)	805, 1405, 1594, 1729
MaeII	ACGT	3 cut(s)	477, 654, 1388
MaeIII	GTNAC	2 cut(s)	617, 1676
MalI	GATC	4 cut(s)	563, 666, 1509, 1749
MbiI	CCGCTC	1 cut(s)	552
MboI	GATC	4 cut(s)	561, 664, 1507, 1747
MfeI	CAATTG	1 cut(s)	1656
MhlI	GDGCHC	1 cut(s)	1523
MluCI	AATT	8 cut(s)	428, 748, 1216, 1462, 1634, 1656, 1665, 1690
Mly113I	GGCGCC	2 cut(s)	369, 848
MlyI	GAGTC	1 cut(s)	230
MmeI	TCCRAC	4 cut(s)	264, 309, 483, 1317
Mph1103I	ATGCAT	1 cut(s)	1398
MroI	TCCGGA	1 cut(s)	1669
MroNI	GCCGGC	3 cut(s)	191, 844, 901
MseI	TTAA	4 cut(s)	603, 984, 1434, 1905
MslI	CAYNNNNRTG	1 cut(s)	1155
MspA1I	CMGCKG	3 cut(s)	1541, 1745, 1892
MspCI	CTTAAG	1 cut(s)	602
MspR9I	CCNGG	7 cut(s)	377, 439, 571, 625, 673, 898, 1147
MunI	CAATTG	1 cut(s)	1656
Mva1269I	GAATGC	2 cut(s)	1150, 1717
MvaI	CCWGG	3 cut(s)	377, 571, 1147
MvnI	CGCG	1 cut(s)	165
NaeI	GCCGGC	3 cut(s)	193, 846, 903
NarI	GGCGCC	2 cut(s)	369, 848
NciI	CCSGG	4 cut(s)	439, 625, 673, 898
NdeII	GATC	4 cut(s)	561, 664, 1507, 1747
NgoMIV	GCCGGC	3 cut(s)	191, 844, 901
NlaIII	CATG	8 cut(s)	325, 740, 1058, 1079, 1160, 1282, 1507, 1514
NlaIV	GGNNCC	5 cut(s)	127, 196, 370, 849, 1556
NmeAIII	GCCGAG	5 cut(s)	94, 102, 336, 1032, 1923
NmuCI	GTSAC	1 cut(s)	1676
NsiI	ATGCAT	1 cut(s)	1398
NspI	RCATGY	1 cut(s)	325
PagI	TCATGA	3 cut(s)	736, 1156, 1510
PceI	AGGCCT	1 cut(s)	1840
PciSI	GCTCTTC	1 cut(s)	542
PcsI	WCGNNNNNNNCGW	1 cut(s)	474
PctI	GAATGC	2 cut(s)	1150, 1717
PdiI	GCCGGC	3 cut(s)	193, 846, 903
PfeI	GAWTC	1 cut(s)	1420
PleI	GAGTC	1 cut(s)	230
PluTI	GGCGCC	2 cut(s)	372, 851
PpsI	GAGTC	1 cut(s)	230
Psp6I	CCWGG	3 cut(s)	375, 569, 1145
PspFI	CCCAGC	3 cut(s)	874, 880, 1760
PspGI	CCWGG	3 cut(s)	375, 569, 1145
PspN4I	GGNNCC	5 cut(s)	127, 196, 370, 849, 1556
PspPI	GGNCC	5 cut(s)	379, 786, 899, 1004, 1143
PvuII	CAGCTG	3 cut(s)	1541, 1745, 1892
RigI	GGCCGGCC	1 cut(s)	905
RsaI	GTAC	3 cut(s)	611, 1097, 1556
RsaNI	GTAC	3 cut(s)	610, 1096, 1555
RseI	CAYNNNNRTG	1 cut(s)	1155
SapI	GCTCTTC	1 cut(s)	542
SaqAI	TTAA	4 cut(s)	603, 984, 1434, 1905
Sau3AI	GATC	4 cut(s)	561, 664, 1507, 1747
Sau96I	GGNCC	5 cut(s)	379, 786, 899, 1004, 1143
SchI	GAGTC	1 cut(s)	230
ScrFI	CCNGG	7 cut(s)	377, 439, 571, 625, 673, 898, 1147
SduI	GDGCHC	1 cut(s)	1523
SfaNI	GCATC	4 cut(s)	805, 1405, 1594, 1729
SfcI	CTRYAG	2 cut(s)	1021, 1041
SfoI	GGCGCC	2 cut(s)	370, 849
SinI	GGWCC	1 cut(s)	1143
SmiMI	CAYNNNNRTG	1 cut(s)	1155
SmlI	CTYRAG	4 cut(s)	602, 1204, 1295, 1867
SmoI	CTYRAG	4 cut(s)	602, 1204, 1295, 1867
Sse9I	AATT	8 cut(s)	428, 748, 1216, 1462, 1634, 1656, 1665, 1690
SseBI	AGGCCT	1 cut(s)	1840
SspDI	GGCGCC	2 cut(s)	368, 847
StuI	AGGCCT	1 cut(s)	1840
StyD4I	CCNGG	7 cut(s)	375, 437, 569, 623, 671, 896, 1145
StyI	CCWWGG	1 cut(s)	836
TaaI	ACNGT	1 cut(s)	1093
TaiI	ACGT	3 cut(s)	480, 657, 1391
TaqI	TCGA	7 cut(s)	84, 228, 426, 432, 492, 1529, 1947
TaqII	GACCGA	1 cut(s)	470
TasI	AATT	8 cut(s)	428, 748, 1216, 1462, 1634, 1656, 1665, 1690
TatI	WGTACW	1 cut(s)	1095
TauI	GCSGC	6 cut(s)	51, 65, 68, 874, 1040, 1133
TfiI	GAWTC	1 cut(s)	1420
Tru1I	TTAA	4 cut(s)	603, 984, 1434, 1905
Tru9I	TTAA	4 cut(s)	603, 984, 1434, 1905
TscAI	CASTG	2 cut(s)	721, 733
TseFI	GTSAC	1 cut(s)	1676
TseI	GCWGC	6 cut(s)	360, 841, 1261, 1411, 1742, 1974
Tsp45I	GTSAC	1 cut(s)	1676
TspDTI	ATGAA	7 cut(s)	17, 406, 725, 1043, 1173, 1267, 1412
TspGWI	ACGGA	1 cut(s)	187
TspRI	CASTG	2 cut(s)	721, 733
Vha464I	CTTAAG	1 cut(s)	602
VpaK11BI	GGWCC	1 cut(s)	1143
XapI	RAATTY	5 cut(s)	428, 1216, 1462, 1665, 1690
XceI	RCATGY	1 cut(s)	325
Zsp2I	ATGCAT	1 cut(s)	1398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.