Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0011220

Physical Location & Seq

Genomic Coordinates Forward (+)

6722073 .. 6728177

Gene Structure 6105 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG068000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGAGCTCCAAAACCCAAAATCTCTGTTTCTGGTGGAGGCTCATCTCCCTTTTGCTTCTTCTAGTGCCCTCATTGTCTCTCAACTCAGATGGAGTTTTCTTGCTTTCTTTTAAGTACTCCATCCTCAGTGATCCGCTTTCAGTCTTAGAAAGCTGGAACTATGAGGATGAAACGCCTTGTTCATGGAGTGGAGTCACATGCACCCAACTTGGAAACCCAGGAACCATCGACATGTTCAGAGTCACAAGCTTGGTCCTCCCAAATAGCCAGCTTCTGGGTTCTATAGCTGAAGAGCTGGGAATGATTGAACACCTTGTCCATCTTGATCTTTCCAACAATTTCTTCAATGGGTCTCTGCCTAAAACCATTCTCAACGCATCTGAACTTCAGGTGCTTTCTCTCTCAAACAATGTCATCTCCGGTGAGCTTCCTGAGTCCATCGGTGATCTCAAAAGCCTTCAGCTTCTCAACATTTCTGACAATGCTTTGGCCGGAAAAGTCCCTCAAAATCTCACTTCTCTGCAAAACCTCACAGTGGTTTCTTTGAGAAGCAACTACTTCACTGGTAATGTCCCAACCGGGTTTAATTCCGTTGAGGTTTTAGATCTCTCTTCAAATCTGCTCAATGGCTCTCTGCCTCTTGATTTTGGTGGAGACAATCTGCGGTACCTAAACCTCTCTTACAACAAGATTTGGGGGAAAATACCGCCAGAGTTTGCAAGGAAAATTTCAGTGAATTCAACCATTGATCTCTCCTTCAACAACTTAACCGGAGCAATCCCGGATTCGCAAGCTTTGCTTAACCAGAAAACAGAGCAGTTTGCAGGAAATGGTGAGCTTTGTGGCAAACCGTTGAAGAATCTTTGCGCAATTCCTTCGACTCTGTCTACTCCACCGAATGTGACTTCATCTTCTCCGGCTATTGCAGCCATTCCCAAAACACTTGACTCACCAGAATCAAACCCTTCCGGCGAACCAAATAGTACTCAGAACAAAACCCAAACCGGGCTAAAACCGGTCACCATCACCGGAATAGTAGTCGGAGACTTAGCCGGAATAGCCATCGTTGGACTGGTCATCCTTTACGTCTACCAAGTCAGGAAGAAATCAAAGAACAACCCAACTTCCACTTCATCGGACCCAGAGAAGAAACCAGACATTGTCACTAAACTCGACCCAGCTGCAACAAAACCATCCTCATGGTCATGCCTCACCATCAAAGGCGAAGAGACCTCGGAAGCAACGAGCTCAGACAGCGACCACGACGAGAAGCCAAACCATGAAACAGGGGGTGTGCACAGTCAAAACAGCGAAAACTCTCAAAAGCGTGGTGTGCTTATAACCGTAGACGGCGAACCGGAGCTTGAGCTCGAGACGTTGCTGAAGGCCTCGGCGTACGTGTTGGGTGCGAGTGGTCCGAGCATTGTGTACAAGGCGGTGCTGGAAGACAAGACGGCGCTTGCGGTGAGGAGGATCGGAGAGAGTGTGGTGGAGAAGATGAGGGATTTCGAGAACCAAGTGAGGGCCATTGCGAAGATGAGGCACCCAAATTTGGTGAGAGTTCGTGGGTTTTATTGGGGAGAAGATGAGAAGCTTGTGATATATGACTATGTCTCCAATGGCAGCCTCGCCGGAACCATTAACAGTGAGTCCCTCTTCTCCGACCTCTCTCTGTTTCTTCTTTTCTTTTTATTTGCCGCGTACGTTAGTGAAATTAATTTTATTTTTGTGCTAAAATACGCTTTTTTCACATTTTCTATGACATTGCTAATTGTTTTTTTTTTTTTTGGCAAATATATTGGCACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0007154 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010029 GO:0010030 GO:0010035 GO:0010646 GO:0010647 GO:0016020 GO:0023051 GO:0023056 GO:0031668 GO:0033554 GO:0042221 GO:0042631 GO:0044464 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071944 GO:0104004 GO:1900140 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1905957 GO:1905959 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

602

Amino Acids

65.6

Weight (kDa)

5.08

Isoelectric Point (pI)

29.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	27 - 68	1e-13	Leucine rich repeat N-terminal domain
LRR_14	PF23598	95 - 185	3.4e-10	Leucine-rich repeat region
LRR_8	PF13855	104 - 163	3.6e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011220)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15300 AT4G34220
fragaria_vesca	FvH4_2g05270
malus_domestica	MD05G1088500.v1.1 MD10G1096400.v1.1
prunus_persica	Prupe.8G134500_v2.0.a1
pyrus_communis	pycom05g08790 pycom10g08270
rosa_chinensis	RchiOBHm_Chr6g0255401
rosa_laevigata	RLG00000014841
rosa_multiflora	Rmu_co8383769.1_g000001 Rmu_sc0002360.1_g000015
rosa_roxburghii	Rroxscaffold_7G00210020
rosa_rugosa	Rorug05G0558100.1 Rorug05G0558200
rosa_samantha	Rh6AG075300 Rh6BG068400 Rh6CG068000 Rh6DG064700
rosa_wichuraiana	Rw6G006620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1340
Acc16I	TGCGCA	1 cut(s)	868
Acc65I	GGTACC	1 cut(s)	666
AccB1I	GGYRCC	2 cut(s)	666, 1542
AccB7I	CCANNNNNTGG	1 cut(s)	274
AccI	GTMKAC	3 cut(s)	887, 1089, 1347
AccII	CGCG	1 cut(s)	1700
AciI	CCGC	6 cut(s)	134, 664, 707, 1436, 1463, 1698
AclWI	GGATC	2 cut(s)	125, 1481
AcoI	YGGCCR	1 cut(s)	489
AcsI	RAATTY	3 cut(s)	726, 736, 1549
AcuI	CTGAAG	4 cut(s)	309, 371, 443, 1403
AfaI	GTAC	6 cut(s)	116, 668, 985, 1397, 1430, 1703
AfiI	CCNNNNNNNGG	5 cut(s)	274, 535, 1005, 1522, 1552
AflIII	ACRYGT	2 cut(s)	231, 1398
AgeI	ACCGGT	1 cut(s)	1015
AgsI	TTSAA	6 cut(s)	308, 346, 615, 741, 760, 856
AjnI	CCWGG	1 cut(s)	217
AjuI	GAANNNNNNNTTGG	4 cut(s)	326, 358, 1114, 1146
AloI	GAACNNNNNNTCC	2 cut(s)	300, 332
Alw21I	GWGCWC	4 cut(s)	8, 1250, 1299, 1371
Alw26I	GTCTC	7 cut(s)	81, 357, 648, 1038, 1223, 1367, 1618
Alw44I	GTGCAC	1 cut(s)	1295
AlwI	GGATC	2 cut(s)	125, 1481
AlwNI	CAGNNNCTG	1 cut(s)	274
Ama87I	CYCGRG	1 cut(s)	1370
AoxI	GGCC	3 cut(s)	489, 1386, 1524
ApaLI	GTGCAC	1 cut(s)	1295
ApeKI	GCWGC	3 cut(s)	926, 1181, 1623
ApoI	RAATTY	3 cut(s)	726, 736, 1549
AseI	ATTAAT	1 cut(s)	1716
AsiGI	ACCGGT	1 cut(s)	1015
Asp718I	GGTACC	1 cut(s)	666
AspLEI	GCGC	2 cut(s)	869, 1459
AspS9I	GGNCC	4 cut(s)	253, 1138, 1415, 1524
AsuC2I	CCSGG	3 cut(s)	580, 782, 1006
AsuHPI	GGTGA	9 cut(s)	434, 455, 845, 942, 1012, 1018, 1204, 1477, 1567
AvaI	CYCGRG	1 cut(s)	1370
AvaII	GGWCC	3 cut(s)	253, 1138, 1415
BaeGI	GKGCMC	2 cut(s)	69, 1299
BanI	GGYRCC	2 cut(s)	666, 1542
BanII	GRGCYC	3 cut(s)	8, 1250, 1371
BbsI	GAAGAC	1 cut(s)	1452
Bbv12I	GWGCWC	4 cut(s)	8, 1250, 1299, 1371
BbvI	GCAGC	3 cut(s)	938, 1168, 1635
BccI	CCATC	9 cut(s)	83, 128, 233, 327, 446, 1031, 1070, 1201, 1223
BceAI	ACGGC	2 cut(s)	1366, 1470
BcgI	CGANNNNNNTGC	4 cut(s)	858, 892, 1163, 1197
BciT130I	CCWGG	1 cut(s)	219
BcnI	CCSGG	3 cut(s)	580, 782, 1006
BcoDI	GTCTC	7 cut(s)	81, 357, 648, 1038, 1223, 1367, 1618
BfaI	CTAG	1 cut(s)	62
BfmI	CTRYAG	1 cut(s)	282
BfoI	RGCGCY	1 cut(s)	1460
BglII	AGATCT	1 cut(s)	604
BisI	GCNGC	4 cut(s)	927, 1182, 1624, 1698
BlsI	GCNGC	4 cut(s)	928, 1183, 1625, 1699
BmcAI	AGTACT	2 cut(s)	116, 985
Bme1390I	CCNGG	4 cut(s)	219, 580, 782, 1006
Bme18I	GGWCC	3 cut(s)	253, 1138, 1415
BmeT110I	CYCGRG	1 cut(s)	1370
BmgT120I	GGNCC	4 cut(s)	253, 1138, 1415, 1524
BmiI	GGNNCC	5 cut(s)	223, 668, 1140, 1544, 1636
BmrFI	CCNGG	4 cut(s)	219, 580, 782, 1006
BmsI	GCATC	1 cut(s)	386
BpiI	GAAGAC	1 cut(s)	1452
BpuEI	CTTGAG	1 cut(s)	1385
BpuMI	CCSGG	3 cut(s)	580, 782, 1006
BsaAI	YACGTR	1 cut(s)	1399
BsaI	GGTCTC	2 cut(s)	357, 1223
BsaJI	CCNNGG	3 cut(s)	217, 1233, 1389
BsaWI	WCCGGW	5 cut(s)	419, 770, 1015, 1028, 1357
BsaXI	ACNNNNNCTCC	4 cut(s)	1470, 1500, 1598, 1628
Bsc4I	CCNNNNNNNGG	5 cut(s)	274, 535, 1005, 1522, 1552
Bse118I	RCCGGY	1 cut(s)	1015
Bse1I	ACTGG	2 cut(s)	568, 1077
Bse3DI	GCAATG	2 cut(s)	1527, 1763
BseBI	CCWGG	1 cut(s)	219
BseDI	CCNNGG	3 cut(s)	217, 1233, 1389
BseGI	GGATG	4 cut(s)	120, 172, 1077, 1193
BseLI	CCNNNNNNNGG	5 cut(s)	274, 535, 1005, 1522, 1552
BseMI	GCAATG	2 cut(s)	1527, 1763
BseMII	CTCAG	5 cut(s)	99, 139, 423, 1001, 1263
BseNI	ACTGG	2 cut(s)	568, 1077
BseRI	GAGGAG	1 cut(s)	1483
BseSI	GKGCMC	2 cut(s)	69, 1299
BseXI	GCAGC	3 cut(s)	938, 1168, 1635
BseYI	CCCAGC	2 cut(s)	295, 1177
Bsh1236I	CGCG	1 cut(s)	1700
BshFI	GGCC	3 cut(s)	491, 1388, 1526
BshNI	GGYRCC	2 cut(s)	666, 1542
BshTI	ACCGGT	1 cut(s)	1015
BsiHKAI	GWGCWC	4 cut(s)	8, 1250, 1299, 1371
BsiHKCI	CYCGRG	1 cut(s)	1370
BsiWI	CGTACG	2 cut(s)	1395, 1701
BslFI	GGGAC	3 cut(s)	485, 557, 1636
BslI	CCNNNNNNNGG	5 cut(s)	274, 535, 1005, 1522, 1552
BsmAI	GTCTC	7 cut(s)	81, 357, 648, 1038, 1223, 1367, 1618
BsmBI	CGTCTC	1 cut(s)	1367
BsmFI	GGGAC	3 cut(s)	485, 557, 1636
BsnI	GGCC	3 cut(s)	491, 1388, 1526
Bso31I	GGTCTC	2 cut(s)	357, 1223
BsoBI	CYCGRG	1 cut(s)	1370
Bsp1286I	GDGCHC	5 cut(s)	8, 69, 1250, 1299, 1371
Bsp1407I	TGTACA	1 cut(s)	1428
Bsp143I	GATC	6 cut(s)	130, 325, 445, 604, 748, 1473
BspACI	CCGC	6 cut(s)	134, 664, 707, 1436, 1463, 1698
BspANI	GGCC	3 cut(s)	491, 1388, 1526
BspCNI	CTCAG	5 cut(s)	98, 138, 424, 1000, 1262
BspFNI	CGCG	1 cut(s)	1700
BspLI	GGNNCC	5 cut(s)	223, 668, 1140, 1544, 1636
BspPI	GGATC	2 cut(s)	125, 1481
BspQI	GCTCTTC	1 cut(s)	285
BspT107I	GGYRCC	2 cut(s)	666, 1542
BspTNI	GGTCTC	2 cut(s)	357, 1223
BsrDI	GCAATG	2 cut(s)	1527, 1763
BsrFI	RCCGGY	1 cut(s)	1015
BsrGI	TGTACA	1 cut(s)	1428
BsrI	ACTGG	2 cut(s)	568, 1077
BssAI	RCCGGY	1 cut(s)	1015
BssECI	CCNNGG	3 cut(s)	217, 1233, 1389
BssMI	GATC	6 cut(s)	130, 325, 445, 604, 748, 1473
Bst2UI	CCWGG	1 cut(s)	219
Bst4CI	ACNGT	5 cut(s)	535, 852, 1301, 1345, 1646
Bst6I	CTCTTC	4 cut(s)	285, 616, 1221, 1661
BstAPI	GCANNNNNTGC	1 cut(s)	796
BstAUI	TGTACA	1 cut(s)	1428
BstBAI	YACGTR	1 cut(s)	1399
BstC8I	GCNNGC	3 cut(s)	269, 792, 1461
BstDEI	CTNAG	8 cut(s)	85, 125, 145, 432, 987, 1048, 1249, 1806
BstEII	GGTNACC	1 cut(s)	1018
BstF5I	GGATG	4 cut(s)	120, 172, 1077, 1193
BstFNI	CGCG	1 cut(s)	1700
BstH2I	RGCGCY	1 cut(s)	1460
BstHHI	GCGC	2 cut(s)	869, 1459
BstKTI	GATC	6 cut(s)	133, 328, 448, 607, 751, 1476
BstMAI	GTCTC	7 cut(s)	81, 357, 648, 1038, 1223, 1367, 1618
BstMBI	GATC	6 cut(s)	130, 325, 445, 604, 748, 1473
BstMWI	GCNNNNNNNGC	5 cut(s)	796, 926, 1058, 1254, 1333
BstNI	CCWGG	1 cut(s)	219
BstNSI	RCATGY	2 cut(s)	201, 235
BstPI	GGTNACC	1 cut(s)	1018
BstSCI	CCNGG	4 cut(s)	217, 578, 780, 1004
BstSFI	CTRYAG	1 cut(s)	282
BstSLI	GKGCMC	2 cut(s)	69, 1299
BstUI	CGCG	1 cut(s)	1700
BstV1I	GCAGC	3 cut(s)	938, 1168, 1635
BstV2I	GAAGAC	1 cut(s)	1452
BstX2I	RGATCY	1 cut(s)	604
BstXI	CCANNNNNNTGG	1 cut(s)	1200
BstYI	RGATCY	1 cut(s)	604
BsuRI	GGCC	3 cut(s)	491, 1388, 1526
BtsCI	GGATG	4 cut(s)	120, 172, 1077, 1193
BtsIMutI	CAGTG	5 cut(s)	133, 540, 561, 738, 1651
Cac8I	GCNNGC	3 cut(s)	269, 792, 1461
CaiI	CAGNNNCTG	1 cut(s)	274
CfoI	GCGC	2 cut(s)	869, 1459
Cfr10I	RCCGGY	1 cut(s)	1015
Cfr13I	GGNCC	4 cut(s)	253, 1138, 1415, 1524
Csp6I	GTAC	6 cut(s)	115, 667, 984, 1396, 1429, 1702
CspAI	ACCGGT	1 cut(s)	1015
CviAII	CATG	6 cut(s)	183, 198, 232, 1200, 1206, 1280
CviQI	GTAC	6 cut(s)	115, 667, 984, 1396, 1429, 1702
DdeI	CTNAG	8 cut(s)	85, 125, 145, 432, 987, 1048, 1249, 1806
DpnI	GATC	6 cut(s)	132, 327, 447, 606, 750, 1475
DpnII	GATC	6 cut(s)	130, 325, 445, 604, 748, 1473
EaeI	YGGCCR	1 cut(s)	489
Eam1104I	CTCTTC	4 cut(s)	285, 616, 1221, 1661
EarI	CTCTTC	4 cut(s)	285, 616, 1221, 1661
Ecl136II	GAGCTC	3 cut(s)	6, 1248, 1369
Eco147I	AGGCCT	1 cut(s)	1388
Eco24I	GRGCYC	3 cut(s)	8, 1250, 1371
Eco31I	GGTCTC	2 cut(s)	357, 1223
Eco47I	GGWCC	3 cut(s)	253, 1138, 1415
Eco53kI	GAGCTC	3 cut(s)	6, 1248, 1369
Eco57I	CTGAAG	4 cut(s)	309, 371, 443, 1403
Eco88I	CYCGRG	1 cut(s)	1370
Eco91I	GGTNACC	1 cut(s)	1018
EcoICRI	GAGCTC	3 cut(s)	6, 1248, 1369
EcoO65I	GGTNACC	1 cut(s)	1018
EcoRI	GAATTC	1 cut(s)	736
EcoRII	CCWGG	1 cut(s)	217
EcoT38I	GRGCYC	3 cut(s)	8, 1250, 1371
Esp3I	CGTCTC	1 cut(s)	1367
FaeI	CATG	6 cut(s)	186, 201, 235, 1203, 1209, 1283
FalI	AAGNNNNNCTT	2 cut(s)	783, 815
FaqI	GGGAC	3 cut(s)	485, 557, 1636
FatI	CATG	6 cut(s)	182, 197, 231, 1199, 1205, 1279
FblI	GTMKAC	3 cut(s)	887, 1089, 1347
Fnu4HI	GCNGC	4 cut(s)	927, 1182, 1624, 1698
FokI	GGATG	4 cut(s)	107, 179, 1064, 1180
FriOI	GRGCYC	3 cut(s)	8, 1250, 1371
Fsp4HI	GCNGC	4 cut(s)	927, 1182, 1624, 1698
FspBI	CTAG	1 cut(s)	62
FspI	TGCGCA	1 cut(s)	868
GlaI	GCGC	2 cut(s)	868, 1458
GluI	GCNGC	4 cut(s)	927, 1182, 1624, 1698
GsaI	CCCAGC	2 cut(s)	299, 1181
HaeII	RGCGCY	1 cut(s)	1460
HaeIII	GGCC	3 cut(s)	491, 1388, 1526
HhaI	GCGC	2 cut(s)	869, 1459
Hin1II	CATG	6 cut(s)	186, 201, 235, 1203, 1209, 1283
Hin6I	GCGC	2 cut(s)	867, 1457
HinP1I	GCGC	2 cut(s)	867, 1457
HindIII	AAGCTT	3 cut(s)	247, 792, 1592
HinfI	GANTC	9 cut(s)	192, 240, 434, 785, 859, 880, 947, 956, 1649
HphI	GGTGA	9 cut(s)	434, 455, 845, 942, 1012, 1018, 1204, 1477, 1567
Hpy166II	GTNNAC	5 cut(s)	888, 1090, 1297, 1348, 1429
Hpy188III	TCNNGA	6 cut(s)	323, 431, 641, 1099, 1372, 1510
Hpy8I	GTNNAC	5 cut(s)	888, 1090, 1297, 1348, 1429
Hpy99I	CGWCG	1 cut(s)	1268
HpyAV	CCTTC	5 cut(s)	467, 766, 885, 975, 1378
HpyCH4III	ACNGT	5 cut(s)	535, 852, 1301, 1345, 1646
HpyCH4IV	ACGT	4 cut(s)	1086, 1376, 1398, 1704
HpyCH4V	TGCA	7 cut(s)	201, 523, 719, 824, 926, 1184, 1297
HpyF10VI	GCNNNNNNNGC	5 cut(s)	796, 926, 1058, 1254, 1333
HpyF3I	CTNAG	8 cut(s)	85, 125, 145, 432, 987, 1048, 1249, 1806
HpySE526I	ACGT	4 cut(s)	1086, 1376, 1398, 1704
Hsp92II	CATG	6 cut(s)	186, 201, 235, 1203, 1209, 1283
HspAI	GCGC	2 cut(s)	867, 1457
KpnI	GGTACC	1 cut(s)	670
Kzo9I	GATC	6 cut(s)	130, 325, 445, 604, 748, 1473
LguI	GCTCTTC	1 cut(s)	285
LmnI	GCTCC	3 cut(s)	11, 773, 1360
Lsp1109I	GCAGC	3 cut(s)	938, 1168, 1635
LweI	GCATC	1 cut(s)	386
MaeI	CTAG	1 cut(s)	62
MaeII	ACGT	4 cut(s)	1086, 1376, 1398, 1704
MaeIII	GTNAC	5 cut(s)	193, 241, 901, 1018, 1162
MalI	GATC	6 cut(s)	132, 327, 447, 606, 750, 1475
MboI	GATC	6 cut(s)	130, 325, 445, 604, 748, 1473
MflI	RGATCY	1 cut(s)	604
MhlI	GDGCHC	5 cut(s)	8, 69, 1250, 1299, 1371
MluCI	AATT	9 cut(s)	337, 586, 726, 736, 870, 1549, 1713, 1717, 1770
MlyI	GAGTC	6 cut(s)	201, 249, 443, 874, 941, 1658
MmeI	TCCRAC	4 cut(s)	357, 1021, 1048, 1686
MseI	TTAA	6 cut(s)	111, 585, 767, 801, 1641, 1716
MslI	CAYNNNNRTG	3 cut(s)	230, 1198, 1204
MspA1I	CMGCKG	1 cut(s)	1181
MspR9I	CCNGG	4 cut(s)	219, 580, 782, 1006
MvaI	CCWGG	1 cut(s)	219
MvnI	CGCG	1 cut(s)	1700
MwoI	GCNNNNNNNGC	5 cut(s)	796, 926, 1058, 1254, 1333
NciI	CCSGG	3 cut(s)	580, 782, 1006
NdeII	GATC	6 cut(s)	130, 325, 445, 604, 748, 1473
NlaIII	CATG	6 cut(s)	186, 201, 235, 1203, 1209, 1283
NlaIV	GGNNCC	5 cut(s)	223, 668, 1140, 1544, 1636
NmeAIII	GCCGAG	1 cut(s)	1370
NmuCI	GTSAC	5 cut(s)	193, 241, 901, 1018, 1162
NsbI	TGCGCA	1 cut(s)	868
NspI	RCATGY	2 cut(s)	201, 235
PaeR7I	CTCGAG	1 cut(s)	1370
PceI	AGGCCT	1 cut(s)	1388
PciI	ACATGT	1 cut(s)	231
PciSI	GCTCTTC	1 cut(s)	285
PcsI	WCGNNNNNNNCGW	1 cut(s)	1241
PfeI	GAWTC	3 cut(s)	785, 859, 956
Pfl23II	CGTACG	2 cut(s)	1395, 1701
PflFI	GACNNNGTC	3 cut(s)	883, 1160, 1610
PflMI	CCANNNNNTGG	1 cut(s)	274
PfoI	TCCNGGA	1 cut(s)	780
PinAI	ACCGGT	1 cut(s)	1015
PkrI	GCNGC	4 cut(s)	928, 1183, 1625, 1699
PleI	GAGTC	6 cut(s)	200, 248, 442, 874, 941, 1657
PpsI	GAGTC	6 cut(s)	200, 248, 442, 874, 941, 1657
Ppu21I	YACGTR	1 cut(s)	1399
PscI	ACATGT	1 cut(s)	231
PshBI	ATTAAT	1 cut(s)	1716
PsiI	TTATAA	1 cut(s)	1340
Psp124BI	GAGCTC	3 cut(s)	8, 1250, 1371
Psp6I	CCWGG	1 cut(s)	217
PspEI	GGTNACC	1 cut(s)	1018
PspFI	CCCAGC	2 cut(s)	295, 1177
PspGI	CCWGG	1 cut(s)	217
PspLI	CGTACG	2 cut(s)	1395, 1701
PspN4I	GGNNCC	5 cut(s)	223, 668, 1140, 1544, 1636
PspPI	GGNCC	4 cut(s)	253, 1138, 1415, 1524
PstNI	CAGNNNCTG	1 cut(s)	274
PsuI	RGATCY	1 cut(s)	604
PsyI	GACNNNGTC	3 cut(s)	883, 1160, 1610
PvuII	CAGCTG	1 cut(s)	1181
RsaI	GTAC	6 cut(s)	116, 668, 985, 1397, 1430, 1703
RsaNI	GTAC	6 cut(s)	115, 667, 984, 1396, 1429, 1702
RseI	CAYNNNNRTG	3 cut(s)	230, 1198, 1204
SacI	GAGCTC	3 cut(s)	8, 1250, 1371
SapI	GCTCTTC	1 cut(s)	285
SaqAI	TTAA	6 cut(s)	111, 585, 767, 801, 1641, 1716
SatI	GCNGC	4 cut(s)	927, 1182, 1624, 1698
Sau3AI	GATC	6 cut(s)	130, 325, 445, 604, 748, 1473
Sau96I	GGNCC	4 cut(s)	253, 1138, 1415, 1524
ScaI	AGTACT	2 cut(s)	116, 985
SchI	GAGTC	6 cut(s)	201, 249, 443, 874, 941, 1658
ScrFI	CCNGG	4 cut(s)	219, 580, 782, 1006
SduI	GDGCHC	5 cut(s)	8, 69, 1250, 1299, 1371
SfaNI	GCATC	1 cut(s)	386
SfcI	CTRYAG	1 cut(s)	282
Sfr274I	CTCGAG	1 cut(s)	1370
SinI	GGWCC	3 cut(s)	253, 1138, 1415
SlaI	CTCGAG	1 cut(s)	1370
SmiMI	CAYNNNNRTG	3 cut(s)	230, 1198, 1204
SmlI	CTYRAG	2 cut(s)	1364, 1370
SmoI	CTYRAG	2 cut(s)	1364, 1370
Sse9I	AATT	9 cut(s)	337, 586, 726, 736, 870, 1549, 1713, 1717, 1770
SseBI	AGGCCT	1 cut(s)	1388
SsiI	CCGC	6 cut(s)	134, 664, 707, 1436, 1463, 1698
SspMI	CTAG	1 cut(s)	62
SstI	GAGCTC	3 cut(s)	8, 1250, 1371
StuI	AGGCCT	1 cut(s)	1388
StyD4I	CCNGG	4 cut(s)	217, 578, 780, 1004
TaaI	ACNGT	5 cut(s)	535, 852, 1301, 1345, 1646
TaiI	ACGT	4 cut(s)	1089, 1379, 1401, 1707
TaqI	TCGA	5 cut(s)	228, 878, 1173, 1371, 1509
TasI	AATT	9 cut(s)	337, 586, 726, 736, 870, 1549, 1713, 1717, 1770
TatI	WGTACW	3 cut(s)	114, 983, 1428
TauI	GCSGC	1 cut(s)	1700
TfiI	GAWTC	3 cut(s)	785, 859, 956
Tru1I	TTAA	6 cut(s)	111, 585, 767, 801, 1641, 1716
Tru9I	TTAA	6 cut(s)	111, 585, 767, 801, 1641, 1716
TscAI	CASTG	5 cut(s)	133, 540, 568, 738, 1651
TseFI	GTSAC	5 cut(s)	193, 241, 901, 1018, 1162
TseI	GCWGC	3 cut(s)	926, 1181, 1623
Tsp45I	GTSAC	5 cut(s)	193, 241, 901, 1018, 1162
TspDTI	ATGAA	5 cut(s)	171, 183, 897, 1122, 1296
TspGWI	ACGGA	1 cut(s)	580
TspRI	CASTG	5 cut(s)	133, 540, 568, 738, 1651
Tth111I	GACNNNGTC	3 cut(s)	883, 1160, 1610
Van91I	CCANNNNNTGG	1 cut(s)	274
VneI	GTGCAC	1 cut(s)	1295
VpaK11BI	GGWCC	3 cut(s)	253, 1138, 1415
VspI	ATTAAT	1 cut(s)	1716
XapI	RAATTY	3 cut(s)	726, 736, 1549
XceI	RCATGY	2 cut(s)	201, 235
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1069
XhoI	CTCGAG	1 cut(s)	1370
XmiI	GTMKAC	3 cut(s)	887, 1089, 1347
XspI	CTAG	1 cut(s)	62
ZrmI	AGTACT	2 cut(s)	116, 985

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.