FvH4_2g05490

Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0013455
Physical Location & Seq
Reverse (-)
4527080 .. 4534454
7375 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g05490.t2

Sequence Viewer

Length: 1998 bp
ATGTCCAGCACAAAACACACATCAATCGGTAACCAAGCTCCCCAATTCTGTCTCTCTCTCTCTCTCTCTCTCACTCTCTCGTATGGAATCTCACCTCTTCTAGATTCTCGCGCCCTCTTGCTCTCGAATTTCGGGCGGTTTAGGATGGATTCGGAATCTTCGGTTCCATCGAGTTCACCTTCAGTGAAAGCTCTTGAGGAACAACCTCCTGCTGCCTCAGATTCAGGATCAGATAATAGTTCTCGGGAGGCGCCATCCAAGCTGAGTACATCTGGCTTGACTTCATGGGCCAAAAATCTGAAAATTCCTCAGCCAATGGCACCATCACAAGACTCTCCGACTGGTTCTGGACAGTCGAGTTTTGCTCGCTTTACAAGTGGATTAGGACTGCGCTTGTCTCCAAAAGCTCCGGTGGAAGATGATGATCCCAGTGGGAGCTCAAAAGCTATGCAACCTGGTATATTTGATACTATTACAAAGGGGATAGTCGACTCTTCTAAGAGTGCTGTGAAAGCTGTTCAAGTTAAGGCCCGACATGTTGTCTCTCAAAACAAACGCAGATACCAGGAGGGAGGATTTGATTTGGATATGACATATATCACCGAGAACATTATTGCTATGGGATTCCCAGCTGGTGATATGAGCTCTGGCTTTTTTGGATATGTTGAGGGGTTCTACAGAAACCACATGGAAGAAGTGATTAAGTTTTTCGAAACTCATCATAAGGGGAAGTACAAAGTATACAACCTGTGTTCAGAAAGGCTATATGATGCATCATTATTTGAAGGAAAGGTGGCTAGTTTCCCATTCGATGATCATAATTGCCCACCAATTCATCTGATATCATTATTTTGTCGAAGTGCTTATTCGTGGCTGAAAGAGGACATTGAGAATGTAGTAGTTGTGCACTGTAAGGCTGGGATGGCAAGGACAGGATTGATGATATCCAGTCTTCTCCTCTACTTAAAGTTCTTTCCTACTGCAGAGGAGTCTATTGACTACTACAACCAGAAGAGATGTTTTGATGGAAAGGGGCTTGTTCTGCCAAGTCAGATTAGGTACGTCAAATATTTCGAACGTATCTTAACATACTTCAACGGTGAAACCCCCCCTGGGCGCAGGTGCATGCTTAGGGGTTTTCGGCTTCACAGGTGCCCATACTGGGTCAGGCCCACCATTACTGTCTCTGATCATAACGGTGTTCTATTCTCCACAAAAGATCATCCAAGAACCAAGGGTCTTTCGCCTGAAGATTTTTGGTTTAGTGCTCCAAAGAAGGGGGTAATGGTCTTTGCTCTGCCAGGGGAACTTGGTTTGACCGAGTTAGTTGGTGACTTCAAAATCCACTTTCATGATCGTCAAGGAGATTTTTACTGCTGGTTGAACACAACGATGACAGAAAATAGAAAAACTTTAACCACCAATGATCTGGATGGATTTGACAAGAGGAAACTGCCTTCCCCTGGATTTCAGCTTGAGGTGGTTTTAGTTGATTATAATGGCAATGTTCCTGCAACACCTACACCTAACACTGACACTACTGCAAAGAAACCGGATGAAAGCTCAGGTACCAAACCTCCATCAGACGACTCAGCTGCAGCTACAGCTGATCCACCATCCCATCATGCAAATCCGGAAAGCCAAGATAAGGATGATGTGTTTTCAGACAACGAGCTGGACGAGACTGGCTCTTCAAAAGTTCAGCGAGCAGAAGGAACTTCTCCAGCTGGTGGAACTGTTGCCAGTACGACTTTCAGTTCCTCATCTACTACAAAATCAGATCAAGTTGCAAGCTTAATGCAAGCAACAAAACAAGTTTCTATTGGAAGCACGGATTCTAAACAGGTGCCTGCTGCTAGTGATGACCCTAAAAGTGCTGCAGTTGTTGGAAATGTCCCGGGCCTTGAAACTCAAAATCCGGAAAGTGAATTTAAGGCAATGGCCGCTGATGCCTCCGTCTTCACATTTGGAGACGAAGAGGACTATGAAAGTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001931 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006464 GO:0006469 GO:0006470 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007154 GO:0007163 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0008104 GO:0008150 GO:0008152 GO:0008154 GO:0008289 GO:0009267 GO:0009605 GO:0009628 GO:0009651 GO:0009892 GO:0009987 GO:0009991 GO:0010563 GO:0010605 GO:0014065 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0023052 GO:0030010 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030041 GO:0030258 GO:0030587 GO:0031152 GO:0031254 GO:0031257 GO:0031268 GO:0031269 GO:0031272 GO:0031279 GO:0031323 GO:0031324 GO:0031344 GO:0031399 GO:0031400 GO:0031667 GO:0031668 GO:0031669 GO:0032153 GO:0032155 GO:0032268 GO:0032269 GO:0032502 GO:0032796 GO:0032879 GO:0033036 GO:0033554 GO:0033673 GO:0034461 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0034613 GO:0034622 GO:0035335 GO:0035556 GO:0036051 GO:0036052 GO:0036211 GO:0040011 GO:0042221 GO:0042325 GO:0042326 GO:0042330 GO:0042578 GO:0042594 GO:0042995 GO:0043086 GO:0043167 GO:0043168 GO:0043170 GO:0043327 GO:0043412 GO:0043549 GO:0043933 GO:0044085 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0045761 GO:0045859 GO:0045936 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048015 GO:0048017 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0050919 GO:0051128 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051246 GO:0051248 GO:0051258 GO:0051270 GO:0051272 GO:0051285 GO:0051286 GO:0051301 GO:0051338 GO:0051339 GO:0051348 GO:0051641 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0051800 GO:0052866 GO:0060255 GO:0060491 GO:0061640 GO:0065003 GO:0065007 GO:0065009 GO:0070300 GO:0070727 GO:0071496 GO:0071704 GO:0071840 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0106017 GO:0120025 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140096 GO:1901564 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
ko00562 ko01521 ko03050 ko04068 ko04070 ko04071 ko04115 ko04140 ko04150 ko04151 ko04212 ko04218 ko04510 ko04931 ko05161 ko05165 ko05169 ko05200 ko05206 ko05213 ko05214 ko05215 ko05218 ko05222 ko05224 ko05225 ko05230 map00562 map01521 map03050 map04068 map04070 map04071 map04115 map04140 map04150 map04151 map04212 map04218 map04510 map04931 map05161 map05165 map05169 map05200 map05206 map05213 map05214 map05215 map05218 map05222 map05224 map05225 map05230
Pfam Domains
Protein Families
DSPc

Protein Analysis

666

Amino Acids

72.72

Weight (kDa)

5.62

Isoelectric Point (pI)

48.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tc-R-P PF22785 218 - 272 1.6e-06 Polymorphic toxin system, DSP-PTPase phosphatase
PTEN2_C2 PF22918 324 - 452 8.2e-72 PTEN2, C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013455)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19420
fragaria_vesca FvH4_2g05490 FvH4_2g05490
malus_domestica MD00G1045500.v1.1 MD05G1087100.v1.1
prunus_persica Prupe.8G131700_v2.0.a1
pyrus_communis pycom05g08640 pycom10g08170
rosa_chinensis RchiOBHm_Chr6g0255761
rosa_laevigata RLG00000014815
rosa_roxburghii Rroxscaffold_7G00209690
rosa_rugosa Rorug05G0561200 Rorug05G0561300
rosa_samantha Rh6AG079200 Rh6BG072300 Rh6CG070500 Rh6DG067700
rosa_wichuraiana Rw6G006830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1497
AarI CACCTGC 1 cut(s) 1110
Acc36I ACCTGC 1 cut(s) 1110
Acc65I GGTACC 1 cut(s) 1568
AccB1I GGYRCC 5 cut(s) 250, 319, 1152, 1568, 1846
AccB7I CCANNNNNTGG 1 cut(s) 1730
AccI GTMKAC 2 cut(s) 489, 741
AccII CGCG 1 cut(s) 111
AccIII TCCGGA 2 cut(s) 1633, 1918
AciI CCGC 2 cut(s) 136, 1944
AclWI GGATC 3 cut(s) 235, 419, 1604
AcoI YGGCCR 1 cut(s) 1941
AcsI RAATTY 3 cut(s) 127, 303, 1928
AcuI CTGAAG 2 cut(s) 165, 1269
AcyI GRCGYC 1 cut(s) 251
AfaI GTAC 5 cut(s) 268, 734, 1061, 1570, 1747
AfiI CCNNNNNNNGG 6 cut(s) 1113, 1162, 1277, 1463, 1648, 1730
AflIII ACRYGT 1 cut(s) 535
AgsI TTSAA 7 cut(s) 521, 785, 1096, 1339, 1384, 1695, 1907
AhdI GACNNNNNGTC 1 cut(s) 539
AjnI CCWGG 5 cut(s) 454, 564, 1111, 1300, 1462
Alw21I GWGCWC 4 cut(s) 440, 647, 909, 1270
Alw26I GTCTC 6 cut(s) 56, 402, 547, 1189, 1676, 1965
Alw44I GTGCAC 1 cut(s) 905
AlwI GGATC 3 cut(s) 235, 419, 1604
Ama87I CYCGRG 2 cut(s) 243, 1897
Aor13HI TCCGGA 2 cut(s) 1633, 1918
AoxI GGCC 5 cut(s) 288, 528, 1169, 1900, 1941
ApaLI GTGCAC 1 cut(s) 905
ApeKI GCWGC 5 cut(s) 212, 1595, 1598, 1853, 1877
ApoI RAATTY 3 cut(s) 127, 303, 1928
Asp718I GGTACC 1 cut(s) 1568
AspLEI GCGC 4 cut(s) 113, 253, 393, 1119
AspS9I GGNCC 4 cut(s) 288, 529, 1170, 1900
AsuC2I CCSGG 2 cut(s) 1898, 1899
AsuHPI GGTGA 6 cut(s) 84, 168, 592, 647, 1112, 1343
AsuII TTCGAA 2 cut(s) 711, 1074
AvaI CYCGRG 2 cut(s) 243, 1897
BaeGI GKGCMC 2 cut(s) 909, 1157
BanI GGYRCC 5 cut(s) 250, 319, 1152, 1568, 1846
BanII GRGCYC 2 cut(s) 440, 647
BbsI GAAGAC 2 cut(s) 944, 1951
Bbv12I GWGCWC 4 cut(s) 440, 647, 909, 1270
BbvCI CCTCAGC 1 cut(s) 309
BbvI GCAGC 5 cut(s) 199, 1582, 1610, 1840, 1864
BcgI CGANNNNNNTGC 2 cut(s) 1577, 1611
BciT130I CCWGG 5 cut(s) 456, 566, 1113, 1302, 1464
BclI TGATCA 2 cut(s) 814, 1189
BcnI CCSGG 2 cut(s) 1898, 1899
BcoDI GTCTC 6 cut(s) 56, 402, 547, 1189, 1676, 1965
BfaI CTAG 3 cut(s) 101, 798, 1857
BfmI CTRYAG 5 cut(s) 676, 981, 1596, 1602, 1878
BfoI RGCGCY 1 cut(s) 254
BfuAI ACCTGC 1 cut(s) 1110
BisI GCNGC 6 cut(s) 213, 1596, 1599, 1854, 1878, 1944
BlsI GCNGC 6 cut(s) 214, 1597, 1600, 1855, 1879, 1945
Bme1390I CCNGG 7 cut(s) 456, 566, 1113, 1302, 1464, 1898, 1899
BmeRI GACNNNNNGTC 1 cut(s) 539
BmeT110I CYCGRG 2 cut(s) 243, 1897
BmgT120I GGNCC 4 cut(s) 288, 529, 1170, 1900
BmiI GGNNCC 6 cut(s) 165, 252, 321, 1154, 1570, 1848
BmrFI CCNGG 7 cut(s) 456, 566, 1113, 1302, 1464, 1898, 1899
BmrI ACTGGG 2 cut(s) 423, 1171
BmsI GCATC 3 cut(s) 760, 782, 1939
BmuI ACTGGG 2 cut(s) 423, 1171
BpiI GAAGAC 2 cut(s) 944, 1951
BplI GAGNNNNNCTC 4 cut(s) 349, 381, 1673, 1705
BpmI CTGGAG 1 cut(s) 1707
Bpu10I CCTNAGC 3 cut(s) 309, 1130, 1564
Bpu14I TTCGAA 2 cut(s) 711, 1074
BpuEI CTTGAG 2 cut(s) 215, 1496
BpuMI CCSGG 2 cut(s) 1898, 1899
BsaBI GATNNNNATC 1 cut(s) 423
BsaHI GRCGYC 1 cut(s) 251
BsaJI CCNNGG 6 cut(s) 1111, 1112, 1233, 1301, 1462, 1897
BsaWI WCCGGW 4 cut(s) 409, 1552, 1633, 1918
BsaXI ACNNNNNCTCC 2 cut(s) 1561, 1591
Bsc4I CCNNNNNNNGG 6 cut(s) 1113, 1162, 1277, 1463, 1648, 1730
Bse1I ACTGG 6 cut(s) 346, 429, 948, 1166, 1690, 1743
Bse3DI GCAATG 2 cut(s) 1510, 1944
Bse8I GATNNNNATC 1 cut(s) 423
BseAI TCCGGA 2 cut(s) 1633, 1918
BseBI CCWGG 5 cut(s) 456, 566, 1113, 1302, 1464
BseDI CCNNGG 6 cut(s) 1111, 1112, 1233, 1301, 1462, 1897
BseGI GGATG 8 cut(s) 150, 254, 927, 1222, 1438, 1561, 1616, 1657
BseJI GATNNNNATC 1 cut(s) 423
BseLI CCNNNNNNNGG 6 cut(s) 1113, 1162, 1277, 1463, 1648, 1730
BseMI GCAATG 2 cut(s) 1510, 1944
BseMII CTCAG 5 cut(s) 231, 254, 323, 1578, 1605
BseNI ACTGG 6 cut(s) 346, 429, 948, 1166, 1690, 1743
BseRI GAGGAG 2 cut(s) 947, 1001
BseSI GKGCMC 2 cut(s) 909, 1157
BseXI GCAGC 5 cut(s) 199, 1582, 1610, 1840, 1864
BseYI CCCAGC 2 cut(s) 628, 917
Bsh1236I CGCG 1 cut(s) 111
BshFI GGCC 5 cut(s) 290, 530, 1171, 1902, 1943
BshNI GGYRCC 5 cut(s) 250, 319, 1152, 1568, 1846
BsiHKAI GWGCWC 4 cut(s) 440, 647, 909, 1270
BsiHKCI CYCGRG 2 cut(s) 243, 1897
BsiSI CCGG 5 cut(s) 410, 1553, 1634, 1898, 1919
BslFI GGGAC 1 cut(s) 1880
BslI CCNNNNNNNGG 6 cut(s) 1113, 1162, 1277, 1463, 1648, 1730
BsmAI GTCTC 6 cut(s) 56, 402, 547, 1189, 1676, 1965
BsmBI CGTCTC 1 cut(s) 1965
BsmFI GGGAC 1 cut(s) 1880
BsnI GGCC 5 cut(s) 290, 530, 1171, 1902, 1943
BsoBI CYCGRG 2 cut(s) 243, 1897
Bsp119I TTCGAA 2 cut(s) 711, 1074
Bsp1286I GDGCHC 5 cut(s) 440, 647, 909, 1157, 1270
Bsp13I TCCGGA 2 cut(s) 1633, 1918
Bsp143I GATC 9 cut(s) 227, 424, 814, 1189, 1219, 1354, 1426, 1609, 1780
BspACI CCGC 2 cut(s) 136, 1944
BspANI GGCC 5 cut(s) 290, 530, 1171, 1902, 1943
BspCNI CTCAG 5 cut(s) 230, 255, 322, 1577, 1604
BspEI TCCGGA 2 cut(s) 1633, 1918
BspFNI CGCG 1 cut(s) 111
BspHI TCATGA 1 cut(s) 1351
BspLI GGNNCC 6 cut(s) 165, 252, 321, 1154, 1570, 1848
BspMAI CTGCAG 3 cut(s) 985, 1600, 1882
BspMI ACCTGC 1 cut(s) 1110
BspPI GGATC 3 cut(s) 235, 419, 1604
BspQI GCTCTTC 1 cut(s) 1696
BspT104I TTCGAA 2 cut(s) 711, 1074
BspT107I GGYRCC 5 cut(s) 250, 319, 1152, 1568, 1846
BsrDI GCAATG 2 cut(s) 1510, 1944
BsrI ACTGG 6 cut(s) 346, 429, 948, 1166, 1690, 1743
BssECI CCNNGG 6 cut(s) 1111, 1112, 1233, 1301, 1462, 1897
BssMI GATC 9 cut(s) 227, 424, 814, 1189, 1219, 1354, 1426, 1609, 1780
BssNAI GTATAC 1 cut(s) 742
BssNI GRCGYC 1 cut(s) 251
BssT1I CCWWGG 1 cut(s) 1233
Bst1107I GTATAC 1 cut(s) 742
Bst2UI CCWGG 5 cut(s) 456, 566, 1113, 1302, 1464
Bst4CI ACNGT 6 cut(s) 354, 911, 1100, 1183, 1199, 1738
Bst6I CTCTTC 5 cut(s) 102, 499, 1007, 1696, 1971
BstACI GRCGYC 1 cut(s) 251
BstBI TTCGAA 2 cut(s) 711, 1074
BstC8I GCNNGC 6 cut(s) 367, 1127, 1707, 1792, 1803, 1851
BstDEI CTNAG 7 cut(s) 217, 263, 309, 498, 1130, 1564, 1591
BstEII GGTNACC 1 cut(s) 29
BstF5I GGATG 8 cut(s) 150, 254, 927, 1222, 1438, 1561, 1616, 1657
BstFNI CGCG 1 cut(s) 111
BstH2I RGCGCY 1 cut(s) 254
BstHHI GCGC 4 cut(s) 113, 253, 393, 1119
BstKTI GATC 9 cut(s) 230, 427, 817, 1192, 1222, 1357, 1429, 1612, 1783
BstMAI GTCTC 6 cut(s) 56, 402, 547, 1189, 1676, 1965
BstMBI GATC 9 cut(s) 227, 424, 814, 1189, 1219, 1354, 1426, 1609, 1780
BstMWI GCNNNNNNNGC 7 cut(s) 259, 512, 923, 1042, 1604, 1943, 1949
BstNI CCWGG 5 cut(s) 456, 566, 1113, 1302, 1464
BstNSI RCATGY 2 cut(s) 539, 1129
BstPI GGTNACC 1 cut(s) 29
BstSCI CCNGG 7 cut(s) 454, 564, 1111, 1300, 1462, 1896, 1897
BstSFI CTRYAG 5 cut(s) 676, 981, 1596, 1602, 1878
BstSLI GKGCMC 2 cut(s) 909, 1157
BstUI CGCG 1 cut(s) 111
BstV1I GCAGC 5 cut(s) 199, 1582, 1610, 1840, 1864
BstV2I GAAGAC 2 cut(s) 944, 1951
BstXI CCANNNNNNTGG 1 cut(s) 1429
BstZ17I GTATAC 1 cut(s) 742
BsuRI GGCC 5 cut(s) 290, 530, 1171, 1902, 1943
BtsCI GGATG 8 cut(s) 150, 254, 927, 1222, 1438, 1561, 1616, 1657
BtsIMutI CAGTG 4 cut(s) 189, 436, 907, 1530
BveI ACCTGC 1 cut(s) 1110
Cac8I GCNNGC 6 cut(s) 367, 1127, 1707, 1792, 1803, 1851
CciI TCATGA 1 cut(s) 1351
CfoI GCGC 4 cut(s) 113, 253, 393, 1119
Cfr13I GGNCC 4 cut(s) 288, 529, 1170, 1900
Cfr9I CCCGGG 1 cut(s) 1897
CsiI ACCWGGT 1 cut(s) 454
Csp6I GTAC 5 cut(s) 267, 733, 1060, 1569, 1746
CviAII CATG 6 cut(s) 285, 536, 688, 1126, 1352, 1625
CviQI GTAC 5 cut(s) 267, 733, 1060, 1569, 1746
DdeI CTNAG 7 cut(s) 217, 263, 309, 498, 1130, 1564, 1591
DinI GGCGCC 1 cut(s) 252
DpnI GATC 9 cut(s) 229, 426, 816, 1191, 1221, 1356, 1428, 1611, 1782
DpnII GATC 9 cut(s) 227, 424, 814, 1189, 1219, 1354, 1426, 1609, 1780
DriI GACNNNNNGTC 1 cut(s) 539
EaeI YGGCCR 1 cut(s) 1941
Eam1104I CTCTTC 5 cut(s) 102, 499, 1007, 1696, 1971
Eam1105I GACNNNNNGTC 1 cut(s) 539
EarI CTCTTC 5 cut(s) 102, 499, 1007, 1696, 1971
Ecl136II GAGCTC 2 cut(s) 438, 645
Eco130I CCWWGG 1 cut(s) 1233
Eco24I GRGCYC 2 cut(s) 440, 647
Eco32I GATATC 2 cut(s) 843, 945
Eco53kI GAGCTC 2 cut(s) 438, 645
Eco57I CTGAAG 2 cut(s) 165, 1269
Eco88I CYCGRG 2 cut(s) 243, 1897
Eco91I GGTNACC 1 cut(s) 29
EcoICRI GAGCTC 2 cut(s) 438, 645
EcoO65I GGTNACC 1 cut(s) 29
EcoRII CCWGG 5 cut(s) 454, 564, 1111, 1300, 1462
EcoRV GATATC 2 cut(s) 843, 945
EcoT14I CCWWGG 1 cut(s) 1233
EcoT22I ATGCAT 1 cut(s) 775
EcoT38I GRGCYC 2 cut(s) 440, 647
EgeI GGCGCC 1 cut(s) 252
EheI GGCGCC 1 cut(s) 252
ErhI CCWWGG 1 cut(s) 1233
Esp3I CGTCTC 1 cut(s) 1965
FaeI CATG 6 cut(s) 288, 539, 691, 1129, 1355, 1628
FaqI GGGAC 1 cut(s) 1880
FatI CATG 6 cut(s) 284, 535, 687, 1125, 1351, 1624
FbaI TGATCA 2 cut(s) 814, 1189
FblI GTMKAC 2 cut(s) 489, 741
Fnu4HI GCNGC 6 cut(s) 213, 1596, 1599, 1854, 1878, 1944
FokI GGATG 8 cut(s) 157, 241, 934, 1209, 1445, 1568, 1603, 1664
FriOI GRGCYC 2 cut(s) 440, 647
Fsp4HI GCNGC 6 cut(s) 213, 1596, 1599, 1854, 1878, 1944
FspBI CTAG 3 cut(s) 101, 798, 1857
GlaI GCGC 4 cut(s) 112, 252, 392, 1118
GluI GCNGC 6 cut(s) 213, 1596, 1599, 1854, 1878, 1944
GsaI CCCAGC 2 cut(s) 632, 921
GsuI CTGGAG 1 cut(s) 1707
HaeII RGCGCY 1 cut(s) 254
HaeIII GGCC 5 cut(s) 290, 530, 1171, 1902, 1943
HapII CCGG 5 cut(s) 410, 1553, 1634, 1898, 1919
HhaI GCGC 4 cut(s) 113, 253, 393, 1119
Hin1I GRCGYC 1 cut(s) 251
Hin1II CATG 6 cut(s) 288, 539, 691, 1129, 1355, 1628
Hin6I GCGC 4 cut(s) 111, 251, 391, 1117
HinP1I GCGC 4 cut(s) 111, 251, 391, 1117
HincII GTYRAC 1 cut(s) 490
HindII GTYRAC 1 cut(s) 490
HindIII AAGCTT 1 cut(s) 1792
HpaII CCGG 5 cut(s) 410, 1553, 1634, 1898, 1919
HphI GGTGA 6 cut(s) 84, 168, 592, 647, 1112, 1343
Hpy166II GTNNAC 4 cut(s) 176, 490, 742, 907
Hpy8I GTNNAC 4 cut(s) 176, 490, 742, 907
HpyAV CCTTC 5 cut(s) 189, 779, 1270, 1467, 1706
HpyCH4III ACNGT 6 cut(s) 354, 911, 1100, 1183, 1199, 1738
HpyCH4IV ACGT 2 cut(s) 1062, 1078
HpyF10VI GCNNNNNNNGC 7 cut(s) 259, 512, 923, 1042, 1604, 1943, 1949
HpyF3I CTNAG 7 cut(s) 217, 263, 309, 498, 1130, 1564, 1591
HpySE526I ACGT 2 cut(s) 1062, 1078
Hsp92I GRCGYC 1 cut(s) 251
Hsp92II CATG 6 cut(s) 288, 539, 691, 1129, 1355, 1628
HspAI GCGC 4 cut(s) 111, 251, 391, 1117
KasI GGCGCC 1 cut(s) 250
Kpn2I TCCGGA 2 cut(s) 1633, 1918
KpnI GGTACC 1 cut(s) 1572
Ksp22I TGATCA 2 cut(s) 814, 1189
Kzo9I GATC 9 cut(s) 227, 424, 814, 1189, 1219, 1354, 1426, 1609, 1780
LguI GCTCTTC 1 cut(s) 1696
LmnI GCTCC 4 cut(s) 43, 412, 435, 1273
Lsp1109I GCAGC 5 cut(s) 199, 1582, 1610, 1840, 1864
LweI GCATC 3 cut(s) 760, 782, 1939
MabI ACCWGGT 1 cut(s) 454
MaeI CTAG 3 cut(s) 101, 798, 1857
MaeII ACGT 2 cut(s) 1062, 1078
MaeIII GTNAC 2 cut(s) 29, 1331
MalI GATC 9 cut(s) 229, 426, 816, 1191, 1221, 1356, 1428, 1611, 1782
MboI GATC 9 cut(s) 227, 424, 814, 1189, 1219, 1354, 1426, 1609, 1780
MhlI GDGCHC 5 cut(s) 440, 647, 909, 1157, 1270
MluCI AATT 6 cut(s) 44, 127, 303, 820, 831, 1928
Mly113I GGCGCC 1 cut(s) 251
MlyI GAGTC 4 cut(s) 326, 485, 998, 1583
MmeI TCCRAC 2 cut(s) 362, 1867
Mph1103I ATGCAT 1 cut(s) 775
MroI TCCGGA 2 cut(s) 1633, 1918
MseI TTAA 7 cut(s) 525, 702, 965, 1085, 1415, 1796, 1932
MslI CAYNNNNRTG 3 cut(s) 1197, 1350, 1391
MspA1I CMGCKG 5 cut(s) 632, 1595, 1607, 1727, 1946
MspI CCGG 5 cut(s) 410, 1553, 1634, 1898, 1919
MspR9I CCNGG 7 cut(s) 456, 566, 1113, 1302, 1464, 1898, 1899
MvaI CCWGG 5 cut(s) 456, 566, 1113, 1302, 1464
MvnI CGCG 1 cut(s) 111
MwoI GCNNNNNNNGC 7 cut(s) 259, 512, 923, 1042, 1604, 1943, 1949
NarI GGCGCC 1 cut(s) 251
NciI CCSGG 2 cut(s) 1898, 1899
NdeII GATC 9 cut(s) 227, 424, 814, 1189, 1219, 1354, 1426, 1609, 1780
NlaIII CATG 6 cut(s) 288, 539, 691, 1129, 1355, 1628
NlaIV GGNNCC 6 cut(s) 165, 252, 321, 1154, 1570, 1848
NmuCI GTSAC 1 cut(s) 1331
NsiI ATGCAT 1 cut(s) 775
NspI RCATGY 2 cut(s) 539, 1129
NspV TTCGAA 2 cut(s) 711, 1074
PaeI GCATGC 1 cut(s) 1129
PagI TCATGA 1 cut(s) 1351
PaqCI CACCTGC 1 cut(s) 1110
PasI CCCWGGG 1 cut(s) 1112
PciI ACATGT 1 cut(s) 535
PciSI GCTCTTC 1 cut(s) 1696
PcsI WCGNNNNNNNCGW 2 cut(s) 167, 1677
PfeI GAWTC 7 cut(s) 87, 104, 149, 155, 221, 624, 1835
PflMI CCANNNNNTGG 1 cut(s) 1730
PkrI GCNGC 6 cut(s) 214, 1597, 1600, 1855, 1879, 1945
PleI GAGTC 4 cut(s) 326, 485, 997, 1583
PluTI GGCGCC 1 cut(s) 254
PpsI GAGTC 4 cut(s) 326, 485, 997, 1583
PscI ACATGT 1 cut(s) 535
PsiI TTATAA 1 cut(s) 1497
Psp124BI GAGCTC 2 cut(s) 440, 647
Psp6I CCWGG 5 cut(s) 454, 564, 1111, 1300, 1462
PspEI GGTNACC 1 cut(s) 29
PspFI CCCAGC 2 cut(s) 628, 917
PspGI CCWGG 5 cut(s) 454, 564, 1111, 1300, 1462
PspN4I GGNNCC 6 cut(s) 165, 252, 321, 1154, 1570, 1848
PspPI GGNCC 4 cut(s) 288, 529, 1170, 1900
PstI CTGCAG 3 cut(s) 985, 1600, 1882
PvuII CAGCTG 4 cut(s) 632, 1595, 1607, 1727
RsaI GTAC 5 cut(s) 268, 734, 1061, 1570, 1747
RsaNI GTAC 5 cut(s) 267, 733, 1060, 1569, 1746
RseI CAYNNNNRTG 3 cut(s) 1197, 1350, 1391
SacI GAGCTC 2 cut(s) 440, 647
SalI GTCGAC 1 cut(s) 488
SapI GCTCTTC 1 cut(s) 1696
SaqAI TTAA 7 cut(s) 525, 702, 965, 1085, 1415, 1796, 1932
SatI GCNGC 6 cut(s) 213, 1596, 1599, 1854, 1878, 1944
Sau3AI GATC 9 cut(s) 227, 424, 814, 1189, 1219, 1354, 1426, 1609, 1780
Sau96I GGNCC 4 cut(s) 288, 529, 1170, 1900
SchI GAGTC 4 cut(s) 326, 485, 998, 1583
ScrFI CCNGG 7 cut(s) 456, 566, 1113, 1302, 1464, 1898, 1899
SduI GDGCHC 5 cut(s) 440, 647, 909, 1157, 1270
SexAI ACCWGGT 1 cut(s) 454
SfaNI GCATC 3 cut(s) 760, 782, 1939
SfcI CTRYAG 5 cut(s) 676, 981, 1596, 1602, 1878
SfoI GGCGCC 1 cut(s) 252
SfuI TTCGAA 2 cut(s) 711, 1074
SmaI CCCGGG 1 cut(s) 1899
SmiMI CAYNNNNRTG 3 cut(s) 1197, 1350, 1391
SmlI CTYRAG 2 cut(s) 194, 1475
SmoI CTYRAG 2 cut(s) 194, 1475
SphI GCATGC 1 cut(s) 1129
Sse9I AATT 6 cut(s) 44, 127, 303, 820, 831, 1928
SsiI CCGC 2 cut(s) 136, 1944
SspDI GGCGCC 1 cut(s) 250
SspI AATATT 1 cut(s) 1070
SspMI CTAG 3 cut(s) 101, 798, 1857
SstI GAGCTC 2 cut(s) 440, 647
StyD4I CCNGG 7 cut(s) 454, 564, 1111, 1300, 1462, 1896, 1897
StyI CCWWGG 1 cut(s) 1233
TaaI ACNGT 6 cut(s) 354, 911, 1100, 1183, 1199, 1738
TaiI ACGT 2 cut(s) 1065, 1081
TaqI TCGA 8 cut(s) 125, 170, 356, 489, 711, 810, 856, 1074
TaqII GACCGA 1 cut(s) 1334
TasI AATT 6 cut(s) 44, 127, 303, 820, 831, 1928
TatI WGTACW 2 cut(s) 266, 732
TauI GCSGC 1 cut(s) 1946
TfiI GAWTC 7 cut(s) 87, 104, 149, 155, 221, 624, 1835
Tru1I TTAA 7 cut(s) 525, 702, 965, 1085, 1415, 1796, 1932
Tru9I TTAA 7 cut(s) 525, 702, 965, 1085, 1415, 1796, 1932
TscAI CASTG 4 cut(s) 189, 436, 914, 1537
TseFI GTSAC 1 cut(s) 1331
TseI GCWGC 5 cut(s) 212, 1595, 1598, 1853, 1877
Tsp45I GTSAC 1 cut(s) 1331
TspDTI ATGAA 4 cut(s) 273, 824, 1340, 1572
TspGWI ACGGA 2 cut(s) 1847, 1945
TspMI CCCGGG 1 cut(s) 1897
TspRI CASTG 4 cut(s) 189, 436, 914, 1537
Van91I CCANNNNNTGG 1 cut(s) 1730
VneI GTGCAC 1 cut(s) 905
XapI RAATTY 3 cut(s) 127, 303, 1928
XbaI TCTAGA 1 cut(s) 100
XceI RCATGY 2 cut(s) 539, 1129
XcmI CCANNNNNNNNNTGG 1 cut(s) 1426
XmaI CCCGGG 1 cut(s) 1897
XmiI GTMKAC 2 cut(s) 489, 741
XspI CTAG 3 cut(s) 101, 798, 1857
Zsp2I ATGCAT 1 cut(s) 775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.