Rw6G006830

Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0013455
Physical Location & Seq
Reverse (-)
10917440 .. 10924216
6777 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G006830.1

Sequence Viewer

Length: 1857 bp
ATGGATTTGGAATCTTCAGTTCCATCAACTTCACCTTCAGTTAAAGCTCCCGAGGAACAACCTCCTGCTGCCTCAGACTCAGGATCAGATAATAGTTCTCGGGAGGCACCATCCAAGCTAAGTGCATCTGGCTTAACATCATGGGCCAAAAATCTGAAAATTCCTCAGCCAATGGCAGCAGCACAAGACAGCTCTCCGACTGGTTCTGGACAGTCAGGTTTTGCACGCTTTACAAGTGGATTAGGATTGCGCTTGTCTCCGAAAGCTCCGGCAGAAGATGATGATGCTAGTGGAAGCTCAAAAGCTGTGCAACCTGGTATATTTGATACAATTACGAAGGGGATAGTCGACTCTTCTAAGAGTGCAGTGAAAGCTGTTCAGGTTAAGGCCCGGCATGTTGTCTCTCAAAACAAACGCAGATACCAGGAGGGAGGATTTGATTTGGATATGACATATATCACCGAGAACATTATTGCTATGGGATTCCCAGCTGGTGATATGAGCTCTGGGTTTTTTGGATATGTTGAGGGGTTCTACAGAAACCACATGGAAGAAGTGATCAAGTTTTTTGAAACTCATCATAAGGGCAAGTACAAAGTATACAACCTGTGTTCAGAAAGGCTATATGATGCATCATTATTTGAAGGAAAGGTGGCTAGTTTCCCGTTTGATGACCATAATTGCCCACCAATTCATCTTATATCATTATTTTGTCGAAGTGCTTATTCGTGGCTGAAAGAGGACATTGAGAATGTAGTAGTTGTGCACTGCAAGGCTGGAATGGCAAGGACAGGATTGATGATATCCAGTCTTCTCCTCTACTTAAAGTTCTTTCCTACTGCAGAGGAGTCTATTGACTACTACAACCAGAAGAGATGTTTTGATGGAAAGGGGCTTGTTCTGCCAAGTCAGATTAGGTACGTCAAATATTTCGAACGTATCTTAACATACTTCAACGGTGAAAACCCTCCTGGTCGCAGGTGCATGCTTAGGGGTTTTCGGCTTCACAGGTGCCCATACTGGGTCAGGCCCACCATTACTGTCTCTGATCATAATGGCGTTCTATTCTCCACAAAAGATCATCCAAGAACCAAGGGTCTTTCGCCTGAAGATTTTTGGTTTAGTGCTCCAAAGAAGGGGGTGATGGTCTTTGCTCTGCCAGGGGAGCTTGGTTTGACTGAGTTAGTTGGTGACTTCAAAATCCACTTTCATGATCGTCAAGGAGATTTTTACTGCTGGTTGAACACAACGATGACAGAAAATAGAAAAACTCTAACCACCAATGATTTGGATGGATTTGACAAGAGGAAATTGCCTTCCCCTGGATTTCAGGTTGAGGTGGTGTTAGTTGATTATAATGGCAATGTTCCTGCAACACCTACACCTAACACTGAAACTACTACGAAGAAACCAGATGAAAGCTCAGGTACCAAACCTCCATCAGATGACGCTGCTGCAGTTGCAGTTGCAGCTGATCCACCATCCCATAATGCGAACCCAGGAGGCCAAGATAAGGATGATGTGTTTTCAGACAGTGAGGCGGAGGAGACTGGCTCTTCAAAAAGTCAGCGAGCAGAAGCAACTTCTCAAGCTGGTGGAACTGTTGCCAGTACCACCTCCAGTTCCGCATCTACTACAAAATCAGATCAAGTTGCAAGTTTAACGCAAGCAACTAAAGAAGTTTCTATTGGAAGCACGGACTCACAGGTCCCTGCTGCTGGTGAGCCTAAAAGTGCTGCAGCTGTTGGTAATGTCCCGGGCCTTGGGACTCAAAATTCGGAAAGTGAATTTAAGGCAATGGCCGCTGATACCTCTGTCTTCACATTCGGAGATGAAGAAGACTACGAAAGTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001931 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006464 GO:0006469 GO:0006470 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007154 GO:0007163 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0008104 GO:0008150 GO:0008152 GO:0008154 GO:0008289 GO:0009267 GO:0009605 GO:0009628 GO:0009651 GO:0009892 GO:0009987 GO:0009991 GO:0010563 GO:0010605 GO:0014065 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0023052 GO:0030010 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030041 GO:0030258 GO:0030587 GO:0031152 GO:0031254 GO:0031257 GO:0031268 GO:0031269 GO:0031272 GO:0031279 GO:0031323 GO:0031324 GO:0031344 GO:0031399 GO:0031400 GO:0031667 GO:0031668 GO:0031669 GO:0032153 GO:0032155 GO:0032268 GO:0032269 GO:0032502 GO:0032796 GO:0032879 GO:0033036 GO:0033554 GO:0033673 GO:0034461 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0034613 GO:0034622 GO:0035335 GO:0035556 GO:0036051 GO:0036052 GO:0036211 GO:0040011 GO:0042221 GO:0042325 GO:0042326 GO:0042330 GO:0042578 GO:0042594 GO:0042995 GO:0043086 GO:0043167 GO:0043168 GO:0043170 GO:0043327 GO:0043412 GO:0043549 GO:0043933 GO:0044085 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0045761 GO:0045859 GO:0045936 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048015 GO:0048017 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0050919 GO:0051128 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051246 GO:0051248 GO:0051258 GO:0051270 GO:0051272 GO:0051285 GO:0051286 GO:0051301 GO:0051338 GO:0051339 GO:0051348 GO:0051641 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0051800 GO:0052866 GO:0060255 GO:0060491 GO:0061640 GO:0065003 GO:0065007 GO:0065009 GO:0070300 GO:0070727 GO:0071496 GO:0071704 GO:0071840 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0106017 GO:0120025 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140096 GO:1901564 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
ko00562 ko01521 ko03050 ko04068 ko04070 ko04071 ko04115 ko04140 ko04150 ko04151 ko04212 ko04218 ko04510 ko04931 ko05161 ko05165 ko05169 ko05200 ko05206 ko05213 ko05214 ko05215 ko05218 ko05222 ko05224 ko05225 ko05230 map00562 map01521 map03050 map04068 map04070 map04071 map04115 map04140 map04150 map04151 map04212 map04218 map04510 map04931 map05161 map05165 map05169 map05200 map05206 map05213 map05214 map05215 map05218 map05222 map05224 map05225 map05230
Pfam Domains
Protein Families
DSPc

Protein Analysis

618

Amino Acids

67.03

Weight (kDa)

5.4

Isoelectric Point (pI)

47.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tc-R-P PF22785 219 - 273 1.6e-06 Polymorphic toxin system, DSP-PTPase phosphatase
PTEN2_C2 PF22918 325 - 453 2.6e-72 PTEN2, C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013455)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19420
fragaria_vesca FvH4_2g05490 FvH4_2g05490
malus_domestica MD00G1045500.v1.1 MD05G1087100.v1.1
prunus_persica Prupe.8G131700_v2.0.a1
pyrus_communis pycom05g08640 pycom10g08170
rosa_chinensis RchiOBHm_Chr6g0255761
rosa_laevigata RLG00000014815
rosa_roxburghii Rroxscaffold_7G00209690
rosa_rugosa Rorug05G0561200 Rorug05G0561300
rosa_samantha Rh6AG079200 Rh6BG072300 Rh6CG070500 Rh6DG067700
rosa_wichuraiana Rw6G006830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1356
AarI CACCTGC 1 cut(s) 969
AasI GACNNNNNNGTC 1 cut(s) 1706
Acc36I ACCTGC 1 cut(s) 969
Acc65I GGTACC 1 cut(s) 1427
AccB1I GGYRCC 3 cut(s) 106, 1011, 1427
AccI GTMKAC 2 cut(s) 348, 600
AciI CCGC 3 cut(s) 1541, 1626, 1803
AclWI GGATC 2 cut(s) 91, 1469
AcoI YGGCCR 1 cut(s) 1800
AcsI RAATTY 3 cut(s) 159, 1774, 1787
AcuI CTGAAG 2 cut(s) 21, 1128
AfaI GTAC 4 cut(s) 593, 920, 1429, 1612
AfiI CCNNNNNNNGG 6 cut(s) 1021, 1136, 1322, 1513, 1718, 1763
AgsI TTSAA 6 cut(s) 572, 644, 955, 1198, 1243, 1560
AjnI CCWGG 6 cut(s) 313, 423, 970, 1159, 1321, 1498
AjuI GAANNNNNNNTTGG 2 cut(s) 1671, 1703
Alw21I GWGCWC 3 cut(s) 506, 768, 1129
Alw26I GTCTC 4 cut(s) 261, 406, 1048, 1541
Alw44I GTGCAC 1 cut(s) 764
AlwI GGATC 2 cut(s) 91, 1469
Ama87I CYCGRG 3 cut(s) 50, 99, 1756
AoxI GGCC 6 cut(s) 144, 387, 1028, 1504, 1759, 1800
ApaLI GTGCAC 1 cut(s) 764
ApeKI GCWGC 9 cut(s) 68, 176, 179, 1451, 1454, 1469, 1715, 1736, 1739
ApoI RAATTY 3 cut(s) 159, 1774, 1787
ArsI GACNNNNNNTTYG 2 cut(s) 1759, 1791
Asp718I GGTACC 1 cut(s) 1427
AspLEI GCGC 1 cut(s) 252
AspS9I GGNCC 5 cut(s) 144, 388, 1029, 1708, 1759
AsuC2I CCSGG 3 cut(s) 391, 1757, 1758
AsuHPI GGTGA 7 cut(s) 24, 451, 506, 971, 1153, 1202, 1733
AsuII TTCGAA 1 cut(s) 933
AvaI CYCGRG 3 cut(s) 50, 99, 1756
AvaII GGWCC 1 cut(s) 1708
BaeGI GKGCMC 2 cut(s) 768, 1016
BaeI ACNNNNGTAYC 2 cut(s) 1800, 1833
BanI GGYRCC 3 cut(s) 106, 1011, 1427
BanII GRGCYC 1 cut(s) 506
BbsI GAAGAC 3 cut(s) 803, 1810, 1845
Bbv12I GWGCWC 3 cut(s) 506, 768, 1129
BbvCI CCTCAGC 1 cut(s) 165
BbvI GCAGC 9 cut(s) 55, 188, 191, 1438, 1441, 1481, 1702, 1723, 1751
BccI CCATC 7 cut(s) 31, 118, 878, 1138, 1286, 1447, 1489
BciT130I CCWGG 6 cut(s) 315, 425, 972, 1161, 1323, 1500
BclI TGATCA 2 cut(s) 558, 1048
BcnI CCSGG 3 cut(s) 391, 1757, 1758
BcoDI GTCTC 4 cut(s) 261, 406, 1048, 1541
BfaI CTAG 2 cut(s) 288, 657
BfmI CTRYAG 4 cut(s) 535, 840, 1455, 1737
BfuAI ACCTGC 1 cut(s) 969
Bme1390I CCNGG 9 cut(s) 315, 391, 425, 972, 1161, 1323, 1500, 1757, 1758
Bme18I GGWCC 1 cut(s) 1708
BmeT110I CYCGRG 3 cut(s) 50, 99, 1756
BmgT120I GGNCC 5 cut(s) 144, 388, 1029, 1708, 1759
BmiI GGNNCC 4 cut(s) 108, 1013, 1429, 1710
BmrFI CCNGG 9 cut(s) 315, 391, 425, 972, 1161, 1323, 1500, 1757, 1758
BmrI ACTGGG 1 cut(s) 1030
BmsI GCATC 5 cut(s) 134, 274, 619, 641, 1637
BmuI ACTGGG 1 cut(s) 1030
BpiI GAAGAC 3 cut(s) 803, 1810, 1845
BplI GAGNNNNNCTC 2 cut(s) 1538, 1570
BpmI CTGGAG 1 cut(s) 1603
Bpu10I CCTNAGC 3 cut(s) 165, 989, 1423
Bpu14I TTCGAA 1 cut(s) 933
BpuEI CTTGAG 1 cut(s) 1572
BpuMI CCSGG 3 cut(s) 391, 1757, 1758
BsaJI CCNNGG 7 cut(s) 51, 1092, 1160, 1321, 1498, 1756, 1762
BsaXI ACNNNNNCTCC 2 cut(s) 1420, 1450
Bsc4I CCNNNNNNNGG 6 cut(s) 1021, 1136, 1322, 1513, 1718, 1763
Bse1I ACTGG 6 cut(s) 205, 807, 1025, 1555, 1608, 1620
Bse3DI GCAATG 2 cut(s) 1369, 1803
BseBI CCWGG 6 cut(s) 315, 425, 972, 1161, 1323, 1500
BseDI CCNNGG 7 cut(s) 51, 1092, 1160, 1321, 1498, 1756, 1762
BseGI GGATG 5 cut(s) 110, 1081, 1297, 1481, 1522
BseLI CCNNNNNNNGG 6 cut(s) 1021, 1136, 1322, 1513, 1718, 1763
BseMI GCAATG 2 cut(s) 1369, 1803
BseMII CTCAG 5 cut(s) 87, 93, 179, 1170, 1437
BseNI ACTGG 6 cut(s) 205, 807, 1025, 1555, 1608, 1620
BseRI GAGGAG 3 cut(s) 806, 860, 1559
BseSI GKGCMC 2 cut(s) 768, 1016
BseXI GCAGC 9 cut(s) 55, 188, 191, 1438, 1441, 1481, 1702, 1723, 1751
BseYI CCCAGC 1 cut(s) 487
BsgI GTGCAG 1 cut(s) 384
BshFI GGCC 6 cut(s) 146, 389, 1030, 1506, 1761, 1802
BshNI GGYRCC 3 cut(s) 106, 1011, 1427
BsiHKAI GWGCWC 3 cut(s) 506, 768, 1129
BsiHKCI CYCGRG 3 cut(s) 50, 99, 1756
BsiSI CCGG 3 cut(s) 269, 391, 1757
BslFI GGGAC 3 cut(s) 1694, 1739, 1780
BslI CCNNNNNNNGG 6 cut(s) 1021, 1136, 1322, 1513, 1718, 1763
BsmAI GTCTC 4 cut(s) 261, 406, 1048, 1541
BsmFI GGGAC 3 cut(s) 1694, 1739, 1780
BsnI GGCC 6 cut(s) 146, 389, 1030, 1506, 1761, 1802
BsoBI CYCGRG 3 cut(s) 50, 99, 1756
Bsp119I TTCGAA 1 cut(s) 933
Bsp1286I GDGCHC 4 cut(s) 506, 768, 1016, 1129
Bsp143I GATC 7 cut(s) 83, 558, 1048, 1078, 1213, 1474, 1645
BspACI CCGC 3 cut(s) 1541, 1626, 1803
BspANI GGCC 6 cut(s) 146, 389, 1030, 1506, 1761, 1802
BspCNI CTCAG 5 cut(s) 86, 92, 178, 1171, 1436
BspHI TCATGA 1 cut(s) 1210
BspLI GGNNCC 4 cut(s) 108, 1013, 1429, 1710
BspMAI CTGCAG 3 cut(s) 844, 1459, 1741
BspMI ACCTGC 1 cut(s) 969
BspPI GGATC 2 cut(s) 91, 1469
BspQI GCTCTTC 1 cut(s) 1561
BspT104I TTCGAA 1 cut(s) 933
BspT107I GGYRCC 3 cut(s) 106, 1011, 1427
BsrDI GCAATG 2 cut(s) 1369, 1803
BsrI ACTGG 6 cut(s) 205, 807, 1025, 1555, 1608, 1620
BssECI CCNNGG 7 cut(s) 51, 1092, 1160, 1321, 1498, 1756, 1762
BssMI GATC 7 cut(s) 83, 558, 1048, 1078, 1213, 1474, 1645
BssNAI GTATAC 1 cut(s) 601
BssT1I CCWWGG 2 cut(s) 1092, 1762
Bst1107I GTATAC 1 cut(s) 601
Bst2UI CCWGG 6 cut(s) 315, 425, 972, 1161, 1323, 1500
Bst4CI ACNGT 5 cut(s) 213, 959, 1042, 1535, 1603
Bst6I CTCTTC 3 cut(s) 358, 866, 1561
BstBI TTCGAA 1 cut(s) 933
BstC8I GCNNGC 4 cut(s) 226, 986, 1572, 1668
BstDEI CTNAG 8 cut(s) 73, 79, 119, 165, 357, 989, 1179, 1423
BstF5I GGATG 5 cut(s) 110, 1081, 1297, 1481, 1522
BstHHI GCGC 1 cut(s) 252
BstKTI GATC 7 cut(s) 86, 561, 1051, 1081, 1216, 1477, 1648
BstMAI GTCTC 4 cut(s) 261, 406, 1048, 1541
BstMBI GATC 7 cut(s) 83, 558, 1048, 1078, 1213, 1474, 1645
BstMWI GCNNNNNNNGC 7 cut(s) 371, 782, 901, 1165, 1460, 1469, 1802
BstNI CCWGG 6 cut(s) 315, 425, 972, 1161, 1323, 1500
BstNSI RCATGY 2 cut(s) 398, 988
BstSCI CCNGG 9 cut(s) 313, 389, 423, 970, 1159, 1321, 1498, 1755, 1756
BstSFI CTRYAG 4 cut(s) 535, 840, 1455, 1737
BstSLI GKGCMC 2 cut(s) 768, 1016
BstV1I GCAGC 9 cut(s) 55, 188, 191, 1438, 1441, 1481, 1702, 1723, 1751
BstV2I GAAGAC 3 cut(s) 803, 1810, 1845
BstXI CCANNNNNNTGG 1 cut(s) 1288
BstZ17I GTATAC 1 cut(s) 601
BsuRI GGCC 6 cut(s) 146, 389, 1030, 1506, 1761, 1802
BtsCI GGATG 5 cut(s) 110, 1081, 1297, 1481, 1522
BtsI GCAGTG 2 cut(s) 372, 766
BtsIMutI CAGTG 4 cut(s) 372, 766, 1389, 1540
BveI ACCTGC 1 cut(s) 969
Cac8I GCNNGC 4 cut(s) 226, 986, 1572, 1668
CciI TCATGA 1 cut(s) 1210
CfoI GCGC 1 cut(s) 252
Cfr13I GGNCC 5 cut(s) 144, 388, 1029, 1708, 1759
Cfr9I CCCGGG 1 cut(s) 1756
CseI GACGC 1 cut(s) 1457
CsiI ACCWGGT 1 cut(s) 313
Csp6I GTAC 4 cut(s) 592, 919, 1428, 1611
CviAII CATG 5 cut(s) 141, 395, 547, 985, 1211
CviQI GTAC 4 cut(s) 592, 919, 1428, 1611
DdeI CTNAG 8 cut(s) 73, 79, 119, 165, 357, 989, 1179, 1423
DpnI GATC 7 cut(s) 85, 560, 1050, 1080, 1215, 1476, 1647
DpnII GATC 7 cut(s) 83, 558, 1048, 1078, 1213, 1474, 1645
DrdI GACNNNNNNGTC 1 cut(s) 1706
DseDI GACNNNNNNGTC 1 cut(s) 1706
EaeI YGGCCR 1 cut(s) 1800
Eam1104I CTCTTC 3 cut(s) 358, 866, 1561
EarI CTCTTC 3 cut(s) 358, 866, 1561
EciI GGCGGA 1 cut(s) 1556
Ecl136II GAGCTC 1 cut(s) 504
Eco130I CCWWGG 2 cut(s) 1092, 1762
Eco24I GRGCYC 1 cut(s) 506
Eco32I GATATC 1 cut(s) 804
Eco47I GGWCC 1 cut(s) 1708
Eco53kI GAGCTC 1 cut(s) 504
Eco57I CTGAAG 2 cut(s) 21, 1128
Eco88I CYCGRG 3 cut(s) 50, 99, 1756
EcoICRI GAGCTC 1 cut(s) 504
EcoO109I RGGNCCY 1 cut(s) 1708
EcoRII CCWGG 6 cut(s) 313, 423, 970, 1159, 1321, 1498
EcoRV GATATC 1 cut(s) 804
EcoT14I CCWWGG 2 cut(s) 1092, 1762
EcoT22I ATGCAT 1 cut(s) 634
EcoT38I GRGCYC 1 cut(s) 506
ErhI CCWWGG 2 cut(s) 1092, 1762
FaeI CATG 5 cut(s) 144, 398, 550, 988, 1214
FaqI GGGAC 3 cut(s) 1694, 1739, 1780
FatI CATG 5 cut(s) 140, 394, 546, 984, 1210
FbaI TGATCA 2 cut(s) 558, 1048
FblI GTMKAC 2 cut(s) 348, 600
FokI GGATG 5 cut(s) 97, 1068, 1304, 1468, 1529
FriOI GRGCYC 1 cut(s) 506
FspBI CTAG 2 cut(s) 288, 657
GlaI GCGC 1 cut(s) 251
GsaI CCCAGC 1 cut(s) 491
GsuI CTGGAG 1 cut(s) 1603
HaeIII GGCC 6 cut(s) 146, 389, 1030, 1506, 1761, 1802
HapII CCGG 3 cut(s) 269, 391, 1757
HgaI GACGC 1 cut(s) 1457
HhaI GCGC 1 cut(s) 252
Hin1II CATG 5 cut(s) 144, 398, 550, 988, 1214
Hin6I GCGC 1 cut(s) 250
HinP1I GCGC 1 cut(s) 250
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HinfI GANTC 7 cut(s) 11, 77, 350, 483, 848, 1700, 1768
HpaII CCGG 3 cut(s) 269, 391, 1757
HphI GGTGA 7 cut(s) 24, 451, 506, 971, 1153, 1202, 1733
Hpy166II GTNNAC 3 cut(s) 349, 601, 766
Hpy188III TCNNGA 5 cut(s) 50, 81, 101, 207, 1211
Hpy8I GTNNAC 3 cut(s) 349, 601, 766
HpyAV CCTTC 5 cut(s) 45, 331, 638, 1129, 1326
HpyCH4III ACNGT 5 cut(s) 213, 959, 1042, 1535, 1603
HpyCH4IV ACGT 2 cut(s) 921, 937
HpyF10VI GCNNNNNNNGC 7 cut(s) 371, 782, 901, 1165, 1460, 1469, 1802
HpyF3I CTNAG 8 cut(s) 73, 79, 119, 165, 357, 989, 1179, 1423
HpySE526I ACGT 2 cut(s) 921, 937
Hsp92II CATG 5 cut(s) 144, 398, 550, 988, 1214
HspAI GCGC 1 cut(s) 250
KpnI GGTACC 1 cut(s) 1431
Ksp22I TGATCA 2 cut(s) 558, 1048
Kzo9I GATC 7 cut(s) 83, 558, 1048, 1078, 1213, 1474, 1645
LguI GCTCTTC 1 cut(s) 1561
LmnI GCTCC 4 cut(s) 52, 271, 1132, 1165
Lsp1109I GCAGC 9 cut(s) 55, 188, 191, 1438, 1441, 1481, 1702, 1723, 1751
LweI GCATC 5 cut(s) 134, 274, 619, 641, 1637
MabI ACCWGGT 1 cut(s) 313
MaeI CTAG 2 cut(s) 288, 657
MaeII ACGT 2 cut(s) 921, 937
MaeIII GTNAC 1 cut(s) 1190
MalI GATC 7 cut(s) 85, 560, 1050, 1080, 1215, 1476, 1647
MboI GATC 7 cut(s) 83, 558, 1048, 1078, 1213, 1474, 1645
MhlI GDGCHC 4 cut(s) 506, 768, 1016, 1129
MluCI AATT 7 cut(s) 159, 330, 679, 690, 1310, 1774, 1787
MlyI GAGTC 5 cut(s) 71, 344, 857, 1694, 1762
MmeI TCCRAC 1 cut(s) 221
Mph1103I ATGCAT 1 cut(s) 634
MseI TTAA 7 cut(s) 42, 134, 384, 824, 944, 1661, 1791
MslI CAYNNNNRTG 2 cut(s) 1209, 1250
MspA1I CMGCKG 4 cut(s) 491, 1472, 1742, 1805
MspI CCGG 3 cut(s) 269, 391, 1757
MspR9I CCNGG 9 cut(s) 315, 391, 425, 972, 1161, 1323, 1500, 1757, 1758
MvaI CCWGG 6 cut(s) 315, 425, 972, 1161, 1323, 1500
MwoI GCNNNNNNNGC 7 cut(s) 371, 782, 901, 1165, 1460, 1469, 1802
NciI CCSGG 3 cut(s) 391, 1757, 1758
NdeII GATC 7 cut(s) 83, 558, 1048, 1078, 1213, 1474, 1645
NlaIII CATG 5 cut(s) 144, 398, 550, 988, 1214
NlaIV GGNNCC 4 cut(s) 108, 1013, 1429, 1710
NmuCI GTSAC 1 cut(s) 1190
NsiI ATGCAT 1 cut(s) 634
NspI RCATGY 2 cut(s) 398, 988
NspV TTCGAA 1 cut(s) 933
PaeI GCATGC 1 cut(s) 988
PagI TCATGA 1 cut(s) 1210
PaqCI CACCTGC 1 cut(s) 969
PciSI GCTCTTC 1 cut(s) 1561
PfeI GAWTC 2 cut(s) 11, 483
PleI GAGTC 5 cut(s) 71, 344, 856, 1694, 1762
PpsI GAGTC 5 cut(s) 71, 344, 856, 1694, 1762
PpuMI RGGWCCY 1 cut(s) 1708
PsiI TTATAA 1 cut(s) 1356
Psp124BI GAGCTC 1 cut(s) 506
Psp5II RGGWCCY 1 cut(s) 1708
Psp6I CCWGG 6 cut(s) 313, 423, 970, 1159, 1321, 1498
PspFI CCCAGC 1 cut(s) 487
PspGI CCWGG 6 cut(s) 313, 423, 970, 1159, 1321, 1498
PspN4I GGNNCC 4 cut(s) 108, 1013, 1429, 1710
PspPI GGNCC 5 cut(s) 144, 388, 1029, 1708, 1759
PspPPI RGGWCCY 1 cut(s) 1708
PstI CTGCAG 3 cut(s) 844, 1459, 1741
PvuII CAGCTG 3 cut(s) 491, 1472, 1742
RsaI GTAC 4 cut(s) 593, 920, 1429, 1612
RsaNI GTAC 4 cut(s) 592, 919, 1428, 1611
RseI CAYNNNNRTG 2 cut(s) 1209, 1250
SacI GAGCTC 1 cut(s) 506
SalI GTCGAC 1 cut(s) 347
SapI GCTCTTC 1 cut(s) 1561
SaqAI TTAA 7 cut(s) 42, 134, 384, 824, 944, 1661, 1791
Sau3AI GATC 7 cut(s) 83, 558, 1048, 1078, 1213, 1474, 1645
Sau96I GGNCC 5 cut(s) 144, 388, 1029, 1708, 1759
SchI GAGTC 5 cut(s) 71, 344, 857, 1694, 1762
ScrFI CCNGG 9 cut(s) 315, 391, 425, 972, 1161, 1323, 1500, 1757, 1758
SduI GDGCHC 4 cut(s) 506, 768, 1016, 1129
SexAI ACCWGGT 1 cut(s) 313
SfaNI GCATC 5 cut(s) 134, 274, 619, 641, 1637
SfcI CTRYAG 4 cut(s) 535, 840, 1455, 1737
SfuI TTCGAA 1 cut(s) 933
SinI GGWCC 1 cut(s) 1708
SmaI CCCGGG 1 cut(s) 1758
SmiMI CAYNNNNRTG 2 cut(s) 1209, 1250
SmlI CTYRAG 1 cut(s) 1587
SmoI CTYRAG 1 cut(s) 1587
SphI GCATGC 1 cut(s) 988
Sse9I AATT 7 cut(s) 159, 330, 679, 690, 1310, 1774, 1787
SsiI CCGC 3 cut(s) 1541, 1626, 1803
SspI AATATT 1 cut(s) 929
SspMI CTAG 2 cut(s) 288, 657
SstI GAGCTC 1 cut(s) 506
StyD4I CCNGG 9 cut(s) 313, 389, 423, 970, 1159, 1321, 1498, 1755, 1756
StyI CCWWGG 2 cut(s) 1092, 1762
TaaI ACNGT 5 cut(s) 213, 959, 1042, 1535, 1603
TaiI ACGT 2 cut(s) 924, 940
TaqI TCGA 3 cut(s) 348, 715, 933
TasI AATT 7 cut(s) 159, 330, 679, 690, 1310, 1774, 1787
TatI WGTACW 1 cut(s) 591
TauI GCSGC 1 cut(s) 1805
TfiI GAWTC 2 cut(s) 11, 483
Tru1I TTAA 7 cut(s) 42, 134, 384, 824, 944, 1661, 1791
Tru9I TTAA 7 cut(s) 42, 134, 384, 824, 944, 1661, 1791
TscAI CASTG 4 cut(s) 372, 773, 1396, 1540
TseFI GTSAC 1 cut(s) 1190
TseI GCWGC 9 cut(s) 68, 176, 179, 1451, 1454, 1469, 1715, 1736, 1739
Tsp45I GTSAC 1 cut(s) 1190
TspDTI ATGAA 4 cut(s) 683, 1199, 1431, 1848
TspGWI ACGGA 1 cut(s) 1712
TspMI CCCGGG 1 cut(s) 1756
TspRI CASTG 4 cut(s) 372, 773, 1396, 1540
VneI GTGCAC 1 cut(s) 764
VpaK11BI GGWCC 1 cut(s) 1708
XapI RAATTY 3 cut(s) 159, 1774, 1787
XceI RCATGY 2 cut(s) 398, 988
XcmI CCANNNNNNNNNTGG 1 cut(s) 1285
XmaI CCCGGG 1 cut(s) 1756
XmiI GTMKAC 2 cut(s) 348, 600
XspI CTAG 2 cut(s) 288, 657
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.