Rh6CG070500

Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0013455
Physical Location & Seq
Reverse (-)
6973636 .. 6981130
7495 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG070500.1

Sequence Viewer

Length: 1851 bp
ATGGATTCGGAATCTTCAGTTCCGTCAACTTCACCTTCAGTTAAAGCTCCTGAGGAACAACCTCCTGCTGCCTCAGACTCAGGATCAGATAATAGTTCTCGGGAGGCGCCATCCAAGCTAAGTGCATCTGGCCTAACATCATGGGCCAAAAATCTGAAAATTCCTCAGCCAATGGCAGCAGCACAAGACAGCTCTCCGACTGGTTCTGGACAGTCAGGTTTTGCACGCTTTACAAGTGGATTAGGATTGCGCTTGTCTCCGAAAGCTCCGGCAGAAGATGATGATCCCAGTGGAAGCTCAAAAGCTATGCAACCTGGTATATTTGATACAATTACAAAGGGGATAGTCGACTCTTCTAAGAATGCAGTGAAAGCTGTTCAGGTTAAGGCCCGGCATGTTGTCTCTCAAAACAAACGCAGATACCAGGAGGGAGGATTTGATTTGGATATGACATATATCACTGAGAACATTATTGCTATGGGATTCCCCGCTGGTGATATGAGCTCTGGGTTTTTTGGATATGTTGAGGGGTTCTACAGAAACCACATGGAAGAAGTCATTAAGTTTTTTGAAACTCATCATAAGGGCAAGTACAAAGTATACAACCTGTGTTCAGAAAGGCTATATGATGCATCATTATTTGAAGGAAAGGTGGCTAGTTTCCCGTTCGATGACCATAATTGCCCACCAATTCATCTTATATCATTATTTTGTCGAAGTGCTTATTCGTGGCTGAAAGAGGACATTGAGAATGTAGTAGTTGTGCACTGTAAGGCTGGAATGGCAAGGACAGGATTGATGATATCCAGTCTTCTCCTCTACTTAAAGTTCTTTCCTACTGCAGAGGAGTCTATTGACTACTACAACCAGAAGAGATGTTTTGATGGAAAGGGGCTTGTTCTGCCAAGTCAGATTAGGTACGTCAAATATTTCGAACGTATCTTAACATACTTCAACGGTGAAAACCCTCCTGGTCGCAGGTGCATGCTTAGGGGTTTTCGGCTTCACAGGTGCCCATACTGGGTCAGGCCCACCATTACTGTCTCTGATCATAATGGCGTTCTATTCTCCACAAAAGATCATCCAAGAACCAAGGGTCTTTCGCCTGAAGATTTTTGGTTTAGTGCTCCAAAGAAGGGGGTAATGGTCTTTGCTCTGCCAGGGGAACTTGGTTTGACCGAGTTAGTTGGTGACTTCAAAATCCACTTTCATGATCGTCAAGGAGATTTTTACTGCTGGTTGAACACAACGATGACAGAAAATAGAAAAACTTTAACCACCAATGATCTGGATGGATTTGACAAGAGGAAACTGCCTTCCCCTGGATTTCAGGTAGAGGTGGTTTTAGTTGATTATAATGGCAGTGTTCCTGCAACACCTACACCTAACACTGAAACTACTACGAAGAAACCGGATGAAAGCTCAGGTACCAAACCTCCATCTGATGACGCTGCTGCAGCTGCAGCTGATCCACCATCCCATAATGCAAACCCAGGAAGCCAAGAGAAGGATGATGTGTTTTCAGACAGTGAGGCGGAGGAGACTGGCACTTCAAAAAGTCAGCGAGCAGAAGCAACTTCTCAAGCTGGTGGAACTGTTGCCAGTACCACCTCCAGTCCATCTAATACAAAATCAGATCAAGTTGCAAGTTTAACGCAAGCAACTAAACAAGTTTCTATTGGAAGCACGGACTCTAAACAGGTCCCTGCTGCTAGTGAGCCTAAAAGTGCTGCAGCTGTTGGAAATGCCCCGGGCCTTGCGACTCAAAATTCGGAAAGTGAATTTAAGGCAATGGCTGCTGATACCTCTGTCTTCACATTCGGAGACGAAGAAGACTATGAAAGTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001931 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006464 GO:0006469 GO:0006470 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007154 GO:0007163 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0008104 GO:0008150 GO:0008152 GO:0008154 GO:0008289 GO:0009267 GO:0009605 GO:0009628 GO:0009651 GO:0009892 GO:0009987 GO:0009991 GO:0010563 GO:0010605 GO:0014065 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0023052 GO:0030010 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030041 GO:0030258 GO:0030587 GO:0031152 GO:0031254 GO:0031257 GO:0031268 GO:0031269 GO:0031272 GO:0031279 GO:0031323 GO:0031324 GO:0031344 GO:0031399 GO:0031400 GO:0031667 GO:0031668 GO:0031669 GO:0032153 GO:0032155 GO:0032268 GO:0032269 GO:0032502 GO:0032796 GO:0032879 GO:0033036 GO:0033554 GO:0033673 GO:0034461 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0034613 GO:0034622 GO:0035335 GO:0035556 GO:0036051 GO:0036052 GO:0036211 GO:0040011 GO:0042221 GO:0042325 GO:0042326 GO:0042330 GO:0042578 GO:0042594 GO:0042995 GO:0043086 GO:0043167 GO:0043168 GO:0043170 GO:0043327 GO:0043412 GO:0043549 GO:0043933 GO:0044085 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0045761 GO:0045859 GO:0045936 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048015 GO:0048017 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0050919 GO:0051128 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051246 GO:0051248 GO:0051258 GO:0051270 GO:0051272 GO:0051285 GO:0051286 GO:0051301 GO:0051338 GO:0051339 GO:0051348 GO:0051641 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0051800 GO:0052866 GO:0060255 GO:0060491 GO:0061640 GO:0065003 GO:0065007 GO:0065009 GO:0070300 GO:0070727 GO:0071496 GO:0071704 GO:0071840 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0106017 GO:0120025 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140096 GO:1901564 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
ko00562 ko01521 ko03050 ko04068 ko04070 ko04071 ko04115 ko04140 ko04150 ko04151 ko04212 ko04218 ko04510 ko04931 ko05161 ko05165 ko05169 ko05200 ko05206 ko05213 ko05214 ko05215 ko05218 ko05222 ko05224 ko05225 ko05230 map00562 map01521 map03050 map04068 map04070 map04071 map04115 map04140 map04150 map04151 map04212 map04218 map04510 map04931 map05161 map05165 map05169 map05200 map05206 map05213 map05214 map05215 map05218 map05222 map05224 map05225 map05230
Pfam Domains
Protein Families
DSPc

Protein Analysis

616

Amino Acids

67.02

Weight (kDa)

5.52

Isoelectric Point (pI)

49.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tc-R-P PF22785 219 - 273 1.6e-06 Polymorphic toxin system, DSP-PTPase phosphatase
PTEN2_C2 PF22918 325 - 453 2.6e-72 PTEN2, C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013455)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19420
fragaria_vesca FvH4_2g05490 FvH4_2g05490
malus_domestica MD00G1045500.v1.1 MD05G1087100.v1.1
prunus_persica Prupe.8G131700_v2.0.a1
pyrus_communis pycom05g08640 pycom10g08170
rosa_chinensis RchiOBHm_Chr6g0255761
rosa_laevigata RLG00000014815
rosa_roxburghii Rroxscaffold_7G00209690
rosa_rugosa Rorug05G0561200 Rorug05G0561300
rosa_samantha Rh6AG079200 Rh6BG072300 Rh6CG070500 Rh6DG067700
rosa_wichuraiana Rw6G006830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1356
AarI CACCTGC 1 cut(s) 969
Acc36I ACCTGC 1 cut(s) 969
Acc65I GGTACC 1 cut(s) 1427
AccB1I GGYRCC 3 cut(s) 106, 1011, 1427
AccI GTMKAC 2 cut(s) 348, 600
AciI CCGC 2 cut(s) 489, 1535
AclWI GGATC 3 cut(s) 91, 278, 1463
AcsI RAATTY 3 cut(s) 159, 1768, 1781
AcuI CTGAAG 2 cut(s) 21, 1128
AcyI GRCGYC 1 cut(s) 107
AfaI GTAC 4 cut(s) 593, 920, 1429, 1606
AfiI CCNNNNNNNGG 4 cut(s) 1021, 1136, 1322, 1507
AgsI TTSAA 6 cut(s) 572, 644, 955, 1198, 1243, 1554
AjnI CCWGG 6 cut(s) 313, 423, 970, 1159, 1321, 1492
Alw21I GWGCWC 3 cut(s) 506, 768, 1129
Alw26I GTCTC 5 cut(s) 261, 406, 1048, 1535, 1818
Alw44I GTGCAC 1 cut(s) 764
AlwI GGATC 3 cut(s) 91, 278, 1463
Ama87I CYCGRG 2 cut(s) 99, 1750
AoxI GGCC 5 cut(s) 130, 144, 387, 1028, 1753
ApaLI GTGCAC 1 cut(s) 764
ApoI RAATTY 3 cut(s) 159, 1768, 1781
ArsI GACNNNNNNTTYG 2 cut(s) 1753, 1785
Asp718I GGTACC 1 cut(s) 1427
AspLEI GCGC 2 cut(s) 109, 252
AspS9I GGNCC 5 cut(s) 144, 388, 1029, 1702, 1753
AsuC2I CCSGG 3 cut(s) 391, 1751, 1752
AsuHPI GGTGA 4 cut(s) 24, 506, 971, 1202
AsuII TTCGAA 1 cut(s) 933
AvaI CYCGRG 2 cut(s) 99, 1750
AvaII GGWCC 1 cut(s) 1702
AxyI CCTNAGG 1 cut(s) 51
BaeGI GKGCMC 2 cut(s) 768, 1016
BaeI ACNNNNGTAYC 2 cut(s) 1794, 1827
BanI GGYRCC 3 cut(s) 106, 1011, 1427
BanII GRGCYC 1 cut(s) 506
BbsI GAAGAC 3 cut(s) 803, 1804, 1839
Bbv12I GWGCWC 3 cut(s) 506, 768, 1129
BbvCI CCTCAGC 1 cut(s) 165
BccI CCATC 6 cut(s) 118, 878, 1286, 1447, 1483, 1627
BciT130I CCWGG 6 cut(s) 315, 425, 972, 1161, 1323, 1494
BclI TGATCA 1 cut(s) 1048
BcnI CCSGG 3 cut(s) 391, 1751, 1752
BcoDI GTCTC 5 cut(s) 261, 406, 1048, 1535, 1818
BfaI CTAG 2 cut(s) 657, 1713
BfmI CTRYAG 5 cut(s) 535, 840, 1455, 1461, 1731
BfoI RGCGCY 1 cut(s) 110
BfuAI ACCTGC 1 cut(s) 969
Bme1390I CCNGG 9 cut(s) 315, 391, 425, 972, 1161, 1323, 1494, 1751, 1752
Bme18I GGWCC 1 cut(s) 1702
BmeT110I CYCGRG 2 cut(s) 99, 1750
BmgT120I GGNCC 5 cut(s) 144, 388, 1029, 1702, 1753
BmiI GGNNCC 4 cut(s) 108, 1013, 1429, 1704
BmrFI CCNGG 9 cut(s) 315, 391, 425, 972, 1161, 1323, 1494, 1751, 1752
BmrI ACTGGG 2 cut(s) 282, 1030
BmsI GCATC 3 cut(s) 134, 619, 641
BmuI ACTGGG 2 cut(s) 282, 1030
BpiI GAAGAC 3 cut(s) 803, 1804, 1839
BpmI CTGGAG 1 cut(s) 1597
Bpu10I CCTNAGC 3 cut(s) 165, 989, 1423
Bpu14I TTCGAA 1 cut(s) 933
BpuEI CTTGAG 1 cut(s) 1566
BpuMI CCSGG 3 cut(s) 391, 1751, 1752
BsaBI GATNNNNATC 1 cut(s) 282
BsaHI GRCGYC 1 cut(s) 107
BsaJI CCNNGG 6 cut(s) 1092, 1160, 1321, 1492, 1749, 1750
BsaWI WCCGGW 1 cut(s) 1411
BsaXI ACNNNNNCTCC 2 cut(s) 1420, 1450
Bsc4I CCNNNNNNNGG 4 cut(s) 1021, 1136, 1322, 1507
Bse1I ACTGG 7 cut(s) 205, 288, 807, 1025, 1549, 1602, 1614
Bse21I CCTNAGG 1 cut(s) 51
Bse3DI GCAATG 1 cut(s) 1797
Bse8I GATNNNNATC 1 cut(s) 282
BseBI CCWGG 6 cut(s) 315, 425, 972, 1161, 1323, 1494
BseDI CCNNGG 6 cut(s) 1092, 1160, 1321, 1492, 1749, 1750
BseGI GGATG 6 cut(s) 110, 1081, 1297, 1420, 1475, 1516
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 4 cut(s) 1021, 1136, 1322, 1507
BseMI GCAATG 1 cut(s) 1797
BseMII CTCAG 6 cut(s) 42, 87, 93, 179, 453, 1437
BseNI ACTGG 7 cut(s) 205, 288, 807, 1025, 1549, 1602, 1614
BseRI GAGGAG 3 cut(s) 806, 860, 1553
BseSI GKGCMC 2 cut(s) 768, 1016
BshFI GGCC 5 cut(s) 132, 146, 389, 1030, 1755
BshNI GGYRCC 3 cut(s) 106, 1011, 1427
BsiHKAI GWGCWC 3 cut(s) 506, 768, 1129
BsiHKCI CYCGRG 2 cut(s) 99, 1750
BsiSI CCGG 4 cut(s) 269, 391, 1412, 1751
BslFI GGGAC 1 cut(s) 1688
BslI CCNNNNNNNGG 4 cut(s) 1021, 1136, 1322, 1507
BsmAI GTCTC 5 cut(s) 261, 406, 1048, 1535, 1818
BsmBI CGTCTC 1 cut(s) 1818
BsmFI GGGAC 1 cut(s) 1688
BsmI GAATGC 1 cut(s) 367
BsnI GGCC 5 cut(s) 132, 146, 389, 1030, 1755
BsoBI CYCGRG 2 cut(s) 99, 1750
Bsp119I TTCGAA 1 cut(s) 933
Bsp1286I GDGCHC 4 cut(s) 506, 768, 1016, 1129
Bsp143I GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1468, 1636
BspACI CCGC 2 cut(s) 489, 1535
BspANI GGCC 5 cut(s) 132, 146, 389, 1030, 1755
BspCNI CTCAG 6 cut(s) 43, 86, 92, 178, 454, 1436
BspHI TCATGA 1 cut(s) 1210
BspLI GGNNCC 4 cut(s) 108, 1013, 1429, 1704
BspMAI CTGCAG 4 cut(s) 844, 1459, 1465, 1735
BspMI ACCTGC 1 cut(s) 969
BspPI GGATC 3 cut(s) 91, 278, 1463
BspT104I TTCGAA 1 cut(s) 933
BspT107I GGYRCC 3 cut(s) 106, 1011, 1427
BsrDI GCAATG 1 cut(s) 1797
BsrI ACTGG 7 cut(s) 205, 288, 807, 1025, 1549, 1602, 1614
BssECI CCNNGG 6 cut(s) 1092, 1160, 1321, 1492, 1749, 1750
BssMI GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1468, 1636
BssNAI GTATAC 1 cut(s) 601
BssNI GRCGYC 1 cut(s) 107
BssT1I CCWWGG 1 cut(s) 1092
Bst1107I GTATAC 1 cut(s) 601
Bst2UI CCWGG 6 cut(s) 315, 425, 972, 1161, 1323, 1494
Bst4CI ACNGT 6 cut(s) 213, 770, 959, 1042, 1529, 1597
Bst6I CTCTTC 2 cut(s) 358, 866
BstACI GRCGYC 1 cut(s) 107
BstAPI GCANNNNNTGC 1 cut(s) 1796
BstBI TTCGAA 1 cut(s) 933
BstC8I GCNNGC 4 cut(s) 226, 986, 1566, 1659
BstDEI CTNAG 9 cut(s) 51, 73, 79, 119, 165, 357, 462, 989, 1423
BstF5I GGATG 6 cut(s) 110, 1081, 1297, 1420, 1475, 1516
BstH2I RGCGCY 1 cut(s) 110
BstHHI GCGC 2 cut(s) 109, 252
BstKTI GATC 8 cut(s) 86, 286, 1051, 1081, 1216, 1288, 1471, 1639
BstMAI GTCTC 5 cut(s) 261, 406, 1048, 1535, 1818
BstMBI GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1468, 1636
BstMWI GCNNNNNNNGC 8 cut(s) 115, 371, 782, 901, 1457, 1460, 1463, 1796
BstNI CCWGG 6 cut(s) 315, 425, 972, 1161, 1323, 1494
BstNSI RCATGY 2 cut(s) 398, 988
BstSCI CCNGG 9 cut(s) 313, 389, 423, 970, 1159, 1321, 1492, 1749, 1750
BstSFI CTRYAG 5 cut(s) 535, 840, 1455, 1461, 1731
BstSLI GKGCMC 2 cut(s) 768, 1016
BstV2I GAAGAC 3 cut(s) 803, 1804, 1839
BstXI CCANNNNNNTGG 1 cut(s) 1288
BstZ17I GTATAC 1 cut(s) 601
Bsu36I CCTNAGG 1 cut(s) 51
BsuRI GGCC 5 cut(s) 132, 146, 389, 1030, 1755
BtsCI GGATG 6 cut(s) 110, 1081, 1297, 1420, 1475, 1516
BtsI GCAGTG 2 cut(s) 372, 1369
BtsIMutI CAGTG 7 cut(s) 295, 372, 459, 766, 1369, 1389, 1534
BveI ACCTGC 1 cut(s) 969
Cac8I GCNNGC 4 cut(s) 226, 986, 1566, 1659
CciI TCATGA 1 cut(s) 1210
CfoI GCGC 2 cut(s) 109, 252
Cfr13I GGNCC 5 cut(s) 144, 388, 1029, 1702, 1753
Cfr9I CCCGGG 1 cut(s) 1750
CseI GACGC 1 cut(s) 1457
CsiI ACCWGGT 1 cut(s) 313
Csp6I GTAC 4 cut(s) 592, 919, 1428, 1605
CviAII CATG 5 cut(s) 141, 395, 547, 985, 1211
CviQI GTAC 4 cut(s) 592, 919, 1428, 1605
DdeI CTNAG 9 cut(s) 51, 73, 79, 119, 165, 357, 462, 989, 1423
DinI GGCGCC 1 cut(s) 108
DpnI GATC 8 cut(s) 85, 285, 1050, 1080, 1215, 1287, 1470, 1638
DpnII GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1468, 1636
Eam1104I CTCTTC 2 cut(s) 358, 866
EarI CTCTTC 2 cut(s) 358, 866
EciI GGCGGA 1 cut(s) 1550
Ecl136II GAGCTC 1 cut(s) 504
Eco130I CCWWGG 1 cut(s) 1092
Eco24I GRGCYC 1 cut(s) 506
Eco32I GATATC 1 cut(s) 804
Eco47I GGWCC 1 cut(s) 1702
Eco53kI GAGCTC 1 cut(s) 504
Eco57I CTGAAG 2 cut(s) 21, 1128
Eco81I CCTNAGG 1 cut(s) 51
Eco88I CYCGRG 2 cut(s) 99, 1750
EcoICRI GAGCTC 1 cut(s) 504
EcoO109I RGGNCCY 1 cut(s) 1702
EcoRII CCWGG 6 cut(s) 313, 423, 970, 1159, 1321, 1492
EcoRV GATATC 1 cut(s) 804
EcoT14I CCWWGG 1 cut(s) 1092
EcoT22I ATGCAT 1 cut(s) 634
EcoT38I GRGCYC 1 cut(s) 506
EgeI GGCGCC 1 cut(s) 108
EheI GGCGCC 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 1092
Esp3I CGTCTC 1 cut(s) 1818
FaeI CATG 5 cut(s) 144, 398, 550, 988, 1214
FaqI GGGAC 1 cut(s) 1688
FatI CATG 5 cut(s) 140, 394, 546, 984, 1210
FauI CCCGC 1 cut(s) 496
FbaI TGATCA 1 cut(s) 1048
FblI GTMKAC 2 cut(s) 348, 600
FokI GGATG 6 cut(s) 97, 1068, 1304, 1427, 1462, 1523
FriOI GRGCYC 1 cut(s) 506
FspBI CTAG 2 cut(s) 657, 1713
GlaI GCGC 2 cut(s) 108, 251
GsuI CTGGAG 1 cut(s) 1597
HaeII RGCGCY 1 cut(s) 110
HaeIII GGCC 5 cut(s) 132, 146, 389, 1030, 1755
HapII CCGG 4 cut(s) 269, 391, 1412, 1751
HgaI GACGC 1 cut(s) 1457
HhaI GCGC 2 cut(s) 109, 252
Hin1I GRCGYC 1 cut(s) 107
Hin1II CATG 5 cut(s) 144, 398, 550, 988, 1214
Hin6I GCGC 2 cut(s) 107, 250
HinP1I GCGC 2 cut(s) 107, 250
HincII GTYRAC 2 cut(s) 27, 349
HindII GTYRAC 2 cut(s) 27, 349
HinfI GANTC 8 cut(s) 5, 11, 77, 350, 483, 848, 1691, 1762
HpaII CCGG 4 cut(s) 269, 391, 1412, 1751
HphI GGTGA 4 cut(s) 24, 506, 971, 1202
Hpy166II GTNNAC 4 cut(s) 27, 349, 601, 766
Hpy188III TCNNGA 6 cut(s) 50, 81, 101, 207, 1211, 1289
Hpy8I GTNNAC 4 cut(s) 27, 349, 601, 766
HpyAV CCTTC 5 cut(s) 45, 638, 1129, 1326, 1501
HpyCH4III ACNGT 6 cut(s) 213, 770, 959, 1042, 1529, 1597
HpyCH4IV ACGT 2 cut(s) 921, 937
HpyF10VI GCNNNNNNNGC 8 cut(s) 115, 371, 782, 901, 1457, 1460, 1463, 1796
HpyF3I CTNAG 9 cut(s) 51, 73, 79, 119, 165, 357, 462, 989, 1423
HpySE526I ACGT 2 cut(s) 921, 937
Hsp92I GRCGYC 1 cut(s) 107
Hsp92II CATG 5 cut(s) 144, 398, 550, 988, 1214
HspAI GCGC 2 cut(s) 107, 250
KasI GGCGCC 1 cut(s) 106
KpnI GGTACC 1 cut(s) 1431
Ksp22I TGATCA 1 cut(s) 1048
Kzo9I GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1468, 1636
LmnI GCTCC 3 cut(s) 52, 271, 1132
LweI GCATC 3 cut(s) 134, 619, 641
MabI ACCWGGT 1 cut(s) 313
MaeI CTAG 2 cut(s) 657, 1713
MaeII ACGT 2 cut(s) 921, 937
MaeIII GTNAC 1 cut(s) 1190
MalI GATC 8 cut(s) 85, 285, 1050, 1080, 1215, 1287, 1470, 1638
MboI GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1468, 1636
MhlI GDGCHC 4 cut(s) 506, 768, 1016, 1129
MluCI AATT 6 cut(s) 159, 330, 679, 690, 1768, 1781
Mly113I GGCGCC 1 cut(s) 107
MlyI GAGTC 5 cut(s) 71, 344, 857, 1685, 1756
MmeI TCCRAC 2 cut(s) 221, 1720
Mph1103I ATGCAT 1 cut(s) 634
MseI TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1652, 1785
MslI CAYNNNNRTG 2 cut(s) 1209, 1250
MspA1I CMGCKG 4 cut(s) 491, 1460, 1466, 1736
MspI CCGG 4 cut(s) 269, 391, 1412, 1751
MspR9I CCNGG 9 cut(s) 315, 391, 425, 972, 1161, 1323, 1494, 1751, 1752
Mva1269I GAATGC 1 cut(s) 367
MvaI CCWGG 6 cut(s) 315, 425, 972, 1161, 1323, 1494
MwoI GCNNNNNNNGC 8 cut(s) 115, 371, 782, 901, 1457, 1460, 1463, 1796
NarI GGCGCC 1 cut(s) 107
NciI CCSGG 3 cut(s) 391, 1751, 1752
NdeII GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1468, 1636
NlaIII CATG 5 cut(s) 144, 398, 550, 988, 1214
NlaIV GGNNCC 4 cut(s) 108, 1013, 1429, 1704
NmuCI GTSAC 1 cut(s) 1190
NsiI ATGCAT 1 cut(s) 634
NspI RCATGY 2 cut(s) 398, 988
NspV TTCGAA 1 cut(s) 933
PaeI GCATGC 1 cut(s) 988
PagI TCATGA 1 cut(s) 1210
PaqCI CACCTGC 1 cut(s) 969
PctI GAATGC 1 cut(s) 367
PfeI GAWTC 3 cut(s) 5, 11, 483
PleI GAGTC 5 cut(s) 71, 344, 856, 1685, 1756
PluTI GGCGCC 1 cut(s) 110
PpsI GAGTC 5 cut(s) 71, 344, 856, 1685, 1756
PpuMI RGGWCCY 1 cut(s) 1702
PsiI TTATAA 1 cut(s) 1356
Psp124BI GAGCTC 1 cut(s) 506
Psp5II RGGWCCY 1 cut(s) 1702
Psp6I CCWGG 6 cut(s) 313, 423, 970, 1159, 1321, 1492
PspGI CCWGG 6 cut(s) 313, 423, 970, 1159, 1321, 1492
PspN4I GGNNCC 4 cut(s) 108, 1013, 1429, 1704
PspPI GGNCC 5 cut(s) 144, 388, 1029, 1702, 1753
PspPPI RGGWCCY 1 cut(s) 1702
PstI CTGCAG 4 cut(s) 844, 1459, 1465, 1735
PvuII CAGCTG 3 cut(s) 1460, 1466, 1736
RsaI GTAC 4 cut(s) 593, 920, 1429, 1606
RsaNI GTAC 4 cut(s) 592, 919, 1428, 1605
RseI CAYNNNNRTG 2 cut(s) 1209, 1250
SacI GAGCTC 1 cut(s) 506
SalI GTCGAC 1 cut(s) 347
SaqAI TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1652, 1785
Sau3AI GATC 8 cut(s) 83, 283, 1048, 1078, 1213, 1285, 1468, 1636
Sau96I GGNCC 5 cut(s) 144, 388, 1029, 1702, 1753
SchI GAGTC 5 cut(s) 71, 344, 857, 1685, 1756
ScrFI CCNGG 9 cut(s) 315, 391, 425, 972, 1161, 1323, 1494, 1751, 1752
SduI GDGCHC 4 cut(s) 506, 768, 1016, 1129
SexAI ACCWGGT 1 cut(s) 313
SfaNI GCATC 3 cut(s) 134, 619, 641
SfcI CTRYAG 5 cut(s) 535, 840, 1455, 1461, 1731
SfoI GGCGCC 1 cut(s) 108
SfuI TTCGAA 1 cut(s) 933
SinI GGWCC 1 cut(s) 1702
SmaI CCCGGG 1 cut(s) 1752
SmiMI CAYNNNNRTG 2 cut(s) 1209, 1250
SmlI CTYRAG 1 cut(s) 1581
SmoI CTYRAG 1 cut(s) 1581
SphI GCATGC 1 cut(s) 988
Sse9I AATT 6 cut(s) 159, 330, 679, 690, 1768, 1781
SsiI CCGC 2 cut(s) 489, 1535
SspDI GGCGCC 1 cut(s) 106
SspI AATATT 1 cut(s) 929
SspMI CTAG 2 cut(s) 657, 1713
SstI GAGCTC 1 cut(s) 506
StyD4I CCNGG 9 cut(s) 313, 389, 423, 970, 1159, 1321, 1492, 1749, 1750
StyI CCWWGG 1 cut(s) 1092
TaaI ACNGT 6 cut(s) 213, 770, 959, 1042, 1529, 1597
TaiI ACGT 2 cut(s) 924, 940
TaqI TCGA 4 cut(s) 348, 669, 715, 933
TaqII GACCGA 1 cut(s) 1193
TasI AATT 6 cut(s) 159, 330, 679, 690, 1768, 1781
TatI WGTACW 1 cut(s) 591
TfiI GAWTC 3 cut(s) 5, 11, 483
Tru1I TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1652, 1785
Tru9I TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1652, 1785
TscAI CASTG 7 cut(s) 295, 372, 466, 773, 1369, 1396, 1534
TseFI GTSAC 1 cut(s) 1190
Tsp45I GTSAC 1 cut(s) 1190
TspDTI ATGAA 3 cut(s) 683, 1199, 1431
TspGWI ACGGA 2 cut(s) 12, 1703
TspMI CCCGGG 1 cut(s) 1750
TspRI CASTG 7 cut(s) 295, 372, 466, 773, 1369, 1396, 1534
VneI GTGCAC 1 cut(s) 764
VpaK11BI GGWCC 1 cut(s) 1702
XapI RAATTY 3 cut(s) 159, 1768, 1781
XceI RCATGY 2 cut(s) 398, 988
XcmI CCANNNNNNNNNTGG 1 cut(s) 1285
XmaI CCCGGG 1 cut(s) 1750
XmiI GTMKAC 2 cut(s) 348, 600
XspI CTAG 2 cut(s) 657, 1713
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.