pycom10g08170

Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
10541335 .. 10543236
1902 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g08170.1

Sequence Viewer

Length: 459 bp
ATGACCAAGCTCCCCTCTCTCCCCTCTGTCCCAAACCCTAGACAGGCTTTGAGTTCACTCGACGCTTCTAAATTCTCGGAGCTGTTCATCTCGCAGTTATTGCAATTCCAAGCTACAGAAGGTATATCGTATGTTGGGTTTGTGAACTATTTTCAATATCCCATTCTTCATCACGATCTCTGGGGTAATAGGATGGATGCAGAACCTGCTGATTCTTCAACTGCACCACCAGTTAAAGCTCCTCAACCACAACCTCCTCCTGCTTCAGACTCTGCATCAGATTCTCATGATGCCCCAGCTAAGCAATTTTCTTCTGGCTTGTCATCATGGGCCAAAAATCTGAAACTTCCTCAGCCATTAGCACCAACACAGGACAGCTCTCAGATTGGGAATGCTGAACAATCAAGTTTTTCATGCTTTACTAGTGGGTTAGGATTACGCTTGTCTCCAAAAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001931 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006464 GO:0006469 GO:0006470 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007154 GO:0007163 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0008104 GO:0008150 GO:0008152 GO:0008154 GO:0008289 GO:0009267 GO:0009605 GO:0009628 GO:0009651 GO:0009892 GO:0009987 GO:0009991 GO:0010563 GO:0010605 GO:0014065 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0023052 GO:0030010 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030041 GO:0030258 GO:0030587 GO:0031152 GO:0031254 GO:0031257 GO:0031268 GO:0031269 GO:0031272 GO:0031279 GO:0031323 GO:0031324 GO:0031344 GO:0031399 GO:0031400 GO:0031667 GO:0031668 GO:0031669 GO:0032153 GO:0032155 GO:0032268 GO:0032269 GO:0032502 GO:0032796 GO:0032879 GO:0033036 GO:0033554 GO:0033673 GO:0034461 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0034613 GO:0034622 GO:0035335 GO:0035556 GO:0036051 GO:0036052 GO:0036211 GO:0040011 GO:0042221 GO:0042325 GO:0042326 GO:0042330 GO:0042578 GO:0042594 GO:0042995 GO:0043086 GO:0043167 GO:0043168 GO:0043170 GO:0043327 GO:0043412 GO:0043549 GO:0043933 GO:0044085 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0045761 GO:0045859 GO:0045936 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048015 GO:0048017 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0050919 GO:0051128 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051246 GO:0051248 GO:0051258 GO:0051270 GO:0051272 GO:0051285 GO:0051286 GO:0051301 GO:0051338 GO:0051339 GO:0051348 GO:0051641 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0051800 GO:0052866 GO:0060255 GO:0060491 GO:0061640 GO:0065003 GO:0065007 GO:0065009 GO:0070300 GO:0070727 GO:0071496 GO:0071704 GO:0071840 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0106017 GO:0120025 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140096 GO:1901564 GO:1903047 GO:1990753
Pfam Domains
Protein Families

Protein Analysis

153

Amino Acids

16.29

Weight (kDa)

5.83

Isoelectric Point (pI)

68.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013455)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 214
AcsI RAATTY 1 cut(s) 71
AcuI CTGAAG 1 cut(s) 249
AfiI CCNNNNNNNGG 1 cut(s) 43
AgsI TTSAA 2 cut(s) 155, 219
AhlI ACTAGT 1 cut(s) 422
AluBI AGCT 6 cut(s) 10, 82, 113, 239, 299, 378
AluI AGCT 6 cut(s) 10, 82, 113, 239, 299, 378
Alw26I GTCTC 1 cut(s) 450
AlwNI CAGNNNCTG 2 cut(s) 206, 272
AoxI GGCC 1 cut(s) 330
ApoI RAATTY 1 cut(s) 71
AspS9I GGNCC 1 cut(s) 330
BbvCI CCTCAGC 1 cut(s) 351
BccI CCATC 1 cut(s) 187
BcoDI GTCTC 1 cut(s) 450
BcuI ACTAGT 1 cut(s) 422
BfaI CTAG 2 cut(s) 39, 423
BfmI CTRYAG 1 cut(s) 114
BfuAI ACCTGC 1 cut(s) 214
BlpI GCTNAGC 1 cut(s) 300
BmgT120I GGNCC 1 cut(s) 330
BmsI GCATC 3 cut(s) 187, 280, 284
Bpu10I CCTNAGC 1 cut(s) 351
Bpu1102I GCTNAGC 1 cut(s) 300
Bsc4I CCNNNNNNNGG 1 cut(s) 43
Bse1I ACTGG 1 cut(s) 230
BseGI GGATG 2 cut(s) 198, 202
BseLI CCNNNNNNNGG 1 cut(s) 43
BseMII CTCAG 2 cut(s) 365, 395
BseNI ACTGG 1 cut(s) 230
BseRI GAGGAG 2 cut(s) 231, 246
BseYI CCCAGC 1 cut(s) 295
BsgI GTGCAG 1 cut(s) 207
BshFI GGCC 1 cut(s) 332
BslFI GGGAC 1 cut(s) 14
BslI CCNNNNNNNGG 1 cut(s) 43
BsmAI GTCTC 1 cut(s) 450
BsmFI GGGAC 1 cut(s) 14
BsmI GAATGC 1 cut(s) 397
BsnI GGCC 1 cut(s) 332
Bsp143I GATC 1 cut(s) 175
Bsp1720I GCTNAGC 1 cut(s) 300
BspANI GGCC 1 cut(s) 332
BspCNI CTCAG 2 cut(s) 364, 394
BspHI TCATGA 1 cut(s) 286
BspMI ACCTGC 1 cut(s) 214
BsrI ACTGG 1 cut(s) 230
BssMI GATC 1 cut(s) 175
BstAPI GCANNNNNTGC 2 cut(s) 100, 206
BstDEI CTNAG 3 cut(s) 300, 351, 381
BstF5I GGATG 2 cut(s) 198, 202
BstKTI GATC 1 cut(s) 178
BstMAI GTCTC 1 cut(s) 450
BstMBI GATC 1 cut(s) 175
BstMWI GCNNNNNNNGC 2 cut(s) 100, 206
BstSFI CTRYAG 1 cut(s) 114
BsuRI GGCC 1 cut(s) 332
BtsCI GGATG 2 cut(s) 198, 202
BveI ACCTGC 1 cut(s) 214
CaiI CAGNNNCTG 2 cut(s) 206, 272
CciI TCATGA 1 cut(s) 286
Cfr13I GGNCC 1 cut(s) 330
CseI GACGC 1 cut(s) 71
CviAII CATG 3 cut(s) 287, 327, 414
DdeI CTNAG 3 cut(s) 300, 351, 381
DpnI GATC 1 cut(s) 177
DpnII GATC 1 cut(s) 175
Eco57I CTGAAG 1 cut(s) 249
FaeI CATG 3 cut(s) 290, 330, 417
FaiI YATR 5 cut(s) 125, 132, 288, 328, 415
FaqI GGGAC 1 cut(s) 14
FatI CATG 3 cut(s) 286, 326, 413
FokI GGATG 2 cut(s) 205, 209
FspBI CTAG 2 cut(s) 39, 423
GsaI CCCAGC 1 cut(s) 299
HaeIII GGCC 1 cut(s) 332
HgaI GACGC 1 cut(s) 71
Hin1II CATG 3 cut(s) 290, 330, 417
HinfI GANTC 3 cut(s) 212, 269, 281
Hpy166II GTNNAC 2 cut(s) 56, 145
Hpy188I TCNGA 5 cut(s) 79, 268, 280, 342, 384
Hpy188III TCNNGA 2 cut(s) 173, 287
Hpy8I GTNNAC 2 cut(s) 56, 145
Hpy99I CGWCG 1 cut(s) 65
HpyAV CCTTC 1 cut(s) 113
HpyCH4V TGCA 4 cut(s) 103, 200, 224, 275
HpyF10VI GCNNNNNNNGC 2 cut(s) 100, 206
HpyF3I CTNAG 3 cut(s) 300, 351, 381
Hsp92II CATG 3 cut(s) 290, 330, 417
Kzo9I GATC 1 cut(s) 175
LmnI GCTCC 3 cut(s) 15, 79, 244
LpnPI CCDG 8 cut(s) 29, 166, 219, 243, 273, 300, 309, 356
LweI GCATC 3 cut(s) 187, 280, 284
MaeI CTAG 2 cut(s) 39, 423
MalI GATC 1 cut(s) 177
MboI GATC 1 cut(s) 175
MboII GAAGA 3 cut(s) 158, 207, 303
MluCI AATT 3 cut(s) 71, 104, 305
MlyI GAGTC 1 cut(s) 263
MnlI CCTC 6 cut(s) 25, 34, 252, 264, 267, 360
MseI TTAA 1 cut(s) 234
Mva1269I GAATGC 1 cut(s) 397
MwoI GCNNNNNNNGC 2 cut(s) 100, 206
NdeII GATC 1 cut(s) 175
NlaIII CATG 3 cut(s) 290, 330, 417
PagI TCATGA 1 cut(s) 286
PctI GAATGC 1 cut(s) 397
PfeI GAWTC 2 cut(s) 212, 281
PleI GAGTC 1 cut(s) 263
PpsI GAGTC 1 cut(s) 263
PspFI CCCAGC 1 cut(s) 295
PspPI GGNCC 1 cut(s) 330
PstNI CAGNNNCTG 2 cut(s) 206, 272
SaqAI TTAA 1 cut(s) 234
Sau3AI GATC 1 cut(s) 175
Sau96I GGNCC 1 cut(s) 330
SchI GAGTC 1 cut(s) 263
SfaNI GCATC 3 cut(s) 187, 280, 284
SfcI CTRYAG 1 cut(s) 114
SpeI ACTAGT 1 cut(s) 422
Sse9I AATT 3 cut(s) 71, 104, 305
SspMI CTAG 2 cut(s) 39, 423
TaqI TCGA 1 cut(s) 60
TasI AATT 3 cut(s) 71, 104, 305
TfiI GAWTC 2 cut(s) 212, 281
Tru1I TTAA 1 cut(s) 234
Tru9I TTAA 1 cut(s) 234
TspDTI ATGAA 3 cut(s) 76, 158, 402
XapI RAATTY 1 cut(s) 71
XspI CTAG 2 cut(s) 39, 423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.