Rroxscaffold_7G00209690

Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0013455
Physical Location & Seq
Forward (+)
59933177 .. 59939246
6070 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00209690.1

Sequence Viewer

Length: 1839 bp
ATGGATTCGGAATCTTCAGTTCCATCAACTTCACCTTCAGTTAAAGCTCCTGAGGAGCAACCTCCTGCTGCCTCAGACTCAGGATCAGATAATAGTTCTCGGGAGGCGCCATCCAAGCTAAGTGCATCTGGCCTAACATCATGGGCCAAAAATCTGAAAATTCCTCAGCCAATGGCAGCAGCACAAGACAGCTCTCCAACTGGTTCTGGACAGTCAGGTTTTGCACGCTTTACAAGTGGATTAGGATTGCGCTTGTCTCCGAAAGCTCCAGCAGAAGATGATGATCCCAGTGGAAGCTCAAAAGCTGTGCAACCTGGTATATTTGATACAATTACGAAGGGGATAGTCGACTCTTCTAAGAGTGCAGTGAAAGCTGTTCAGGTTAAGGCCCGACATGTTGTCTCTCAAAACAAACGCAGATACCAGGAGGGAGGATTTGATTTGGATATGACATATATCACCGAGAACATTATTGCTATGGGATTCCCAGCTGGTGATATGAGCTCTGGGTTTTTTGGATATGTTGAGGGGTTCTACAGAAACCACATGGAAGAAGTGATTAAGTTTTTTGAAACTCATCATAAGGGCAAGTACAAAGTATACAACCTGTGTTCAGAAAGGCTATATGATGCATCATTATTTGAAGGAAAGGTGGCTAGTTTCCCGTTTGATGACCATAATTGCCCACCAATTCATCTTATATCATTATTTTGTCGAAGTGCTTATTCGTGGCTGAAAGAGGACATTGAGAATGTAGTAGTTGTGCACTGTAAGGCTGGAATGGCAAGGACAGGATTGATGATATCCAGTCTTCTCCTCTACTTAAAGTTCTTTCCTACTGCAGAGGAGTCAATTGACTACTACAACCAGAAGAGATGTTTTGATGGAAAGGGGCTTGTTCTGCCAAGTCAGATTAGGTACGTCAAATATTTCGAACGTATCTTAACATACTTCAACGGTGAAAACCCTCCTGGTCGCAGGTGCATGCTTAGGGGTTTTCGGCTTCACAGGTGCCCATACTGGGTCAGGCCCACCATTACTGTCTCTGATCATAATGGCGTTCTATTCTCCACAAAAGATCATCCAAGAACCAAGGGTCTTTCGCCTGAAGATTTTTGGTTTAGTGCTCCAAAGAAGGGGGTAATGGTCTTTGCTCTGCCAGGGGAGCTTGGTTTGACTGAGTTAGTTGGTGACTTCAAAATCCACTTTCATGATCGTCAAGGAGATTTTTACTGCTGGTTGAACACAACGATGACAGAAAATAGAAAAACTTTAACCACCAATGATTTGGATGGATTTGACAAGGTTGAGGTGGTGTTAGTTGATTATAATGGCAATGTTCCTGCAACACCTACACCTAACACTGAAACTACTACGAAGAAACCAGATGAAAGCTCAAGTACCAAACCTCCATCAGAGGACGCTGCTGCAGCTGCAGCTGCAGCTGCAGCTGATCCACCATCCCATAATGCGAACCCAGGAGGCCAAGATAAGGATGATGTGTTTTCAGACAATGAGGTGGAGGAGACTGGCTCTTCAAAAAGTCAGCGAGCAGAAGCAACTTCTCAAGCTGGTGGAACTGTTGCCAGTACCACCTCCAGTTCCGCATCTACTACAAAATCAGATCAAGTTGCAAGTTTAACGCAAGCAACTAAACAAGTTTCTATTGGAAGCACGGACTCTAAACAGGTCCCTGCTGCTAGTGAGCCTAAAAGTGCTGCAGCTGTTGGAAATGTCCCAGGCCTTGGGACTCAAAATTCGGAAAGTGAATTTAAGGCAATGGCCGCTGATACCTCTGTCTTCACATTCGGAGACGAAGAAGACTATGAAAGTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001931 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006464 GO:0006469 GO:0006470 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006935 GO:0006950 GO:0006970 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007154 GO:0007163 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0008104 GO:0008150 GO:0008152 GO:0008154 GO:0008289 GO:0009267 GO:0009605 GO:0009628 GO:0009651 GO:0009892 GO:0009987 GO:0009991 GO:0010563 GO:0010605 GO:0014065 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0023052 GO:0030010 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030041 GO:0030258 GO:0030587 GO:0031152 GO:0031254 GO:0031257 GO:0031268 GO:0031269 GO:0031272 GO:0031279 GO:0031323 GO:0031324 GO:0031344 GO:0031399 GO:0031400 GO:0031667 GO:0031668 GO:0031669 GO:0032153 GO:0032155 GO:0032268 GO:0032269 GO:0032502 GO:0032796 GO:0032879 GO:0033036 GO:0033554 GO:0033673 GO:0034461 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0034613 GO:0034622 GO:0035335 GO:0035556 GO:0036051 GO:0036052 GO:0036211 GO:0040011 GO:0042221 GO:0042325 GO:0042326 GO:0042330 GO:0042578 GO:0042594 GO:0042995 GO:0043086 GO:0043167 GO:0043168 GO:0043170 GO:0043327 GO:0043412 GO:0043549 GO:0043933 GO:0044085 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0045761 GO:0045859 GO:0045936 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048015 GO:0048017 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0050919 GO:0051128 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051246 GO:0051248 GO:0051258 GO:0051270 GO:0051272 GO:0051285 GO:0051286 GO:0051301 GO:0051338 GO:0051339 GO:0051348 GO:0051641 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0051800 GO:0052866 GO:0060255 GO:0060491 GO:0061640 GO:0065003 GO:0065007 GO:0065009 GO:0070300 GO:0070727 GO:0071496 GO:0071704 GO:0071840 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0106017 GO:0120025 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140096 GO:1901564 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
ko00562 ko01521 ko03050 ko04068 ko04070 ko04071 ko04115 ko04140 ko04150 ko04151 ko04212 ko04218 ko04510 ko04931 ko05161 ko05165 ko05169 ko05200 ko05206 ko05213 ko05214 ko05215 ko05218 ko05222 ko05224 ko05225 ko05230 map00562 map01521 map03050 map04068 map04070 map04071 map04115 map04140 map04150 map04151 map04212 map04218 map04510 map04931 map05161 map05165 map05169 map05200 map05206 map05213 map05214 map05215 map05218 map05222 map05224 map05225 map05230
Pfam Domains
Protein Families
DSPc

Protein Analysis

612

Amino Acids

66.37

Weight (kDa)

5.4

Isoelectric Point (pI)

48.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tc-R-P PF22785 219 - 273 1.6e-06 Polymorphic toxin system, DSP-PTPase phosphatase
PTEN2_C2 PF22918 325 - 441 7.3e-63 PTEN2, C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013455)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19420
fragaria_vesca FvH4_2g05490 FvH4_2g05490
malus_domestica MD00G1045500.v1.1 MD05G1087100.v1.1
prunus_persica Prupe.8G131700_v2.0.a1
pyrus_communis pycom05g08640 pycom10g08170
rosa_chinensis RchiOBHm_Chr6g0255761
rosa_laevigata RLG00000014815
rosa_roxburghii Rroxscaffold_7G00209690
rosa_rugosa Rorug05G0561200 Rorug05G0561300
rosa_samantha Rh6AG079200 Rh6BG072300 Rh6CG070500 Rh6DG067700
rosa_wichuraiana Rw6G006830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1329
AarI CACCTGC 1 cut(s) 969
Acc36I ACCTGC 1 cut(s) 969
AccB1I GGYRCC 2 cut(s) 106, 1011
AccB7I CCANNNNNTGG 1 cut(s) 1745
AccI GTMKAC 2 cut(s) 348, 600
AciI CCGC 2 cut(s) 1605, 1785
AclWI GGATC 3 cut(s) 91, 278, 1448
AcoI YGGCCR 1 cut(s) 1782
AcsI RAATTY 3 cut(s) 159, 1756, 1769
AcuI CTGAAG 2 cut(s) 21, 1128
AcyI GRCGYC 1 cut(s) 107
AfaI GTAC 4 cut(s) 593, 920, 1402, 1591
AfiI CCNNNNNNNGG 4 cut(s) 1021, 1136, 1492, 1745
AflIII ACRYGT 1 cut(s) 394
AgsI TTSAA 6 cut(s) 572, 644, 955, 1198, 1243, 1539
AhdI GACNNNNNGTC 1 cut(s) 398
AjnI CCWGG 6 cut(s) 313, 423, 970, 1159, 1477, 1738
Alw21I GWGCWC 3 cut(s) 506, 768, 1129
Alw26I GTCTC 5 cut(s) 261, 406, 1048, 1520, 1806
Alw44I GTGCAC 1 cut(s) 764
AlwI GGATC 3 cut(s) 91, 278, 1448
Ama87I CYCGRG 1 cut(s) 99
AoxI GGCC 7 cut(s) 130, 144, 387, 1028, 1483, 1741, 1782
ApaLI GTGCAC 1 cut(s) 764
ApoI RAATTY 3 cut(s) 159, 1756, 1769
ArsI GACNNNNNNTTYG 2 cut(s) 1741, 1773
AspLEI GCGC 2 cut(s) 109, 252
AspS9I GGNCC 4 cut(s) 144, 388, 1029, 1690
AsuHPI GGTGA 5 cut(s) 24, 451, 506, 971, 1202
AsuII TTCGAA 1 cut(s) 933
AvaI CYCGRG 1 cut(s) 99
AvaII GGWCC 1 cut(s) 1690
AxyI CCTNAGG 1 cut(s) 51
BaeGI GKGCMC 2 cut(s) 768, 1016
BaeI ACNNNNGTAYC 2 cut(s) 1782, 1815
BanI GGYRCC 2 cut(s) 106, 1011
BanII GRGCYC 1 cut(s) 506
BbsI GAAGAC 3 cut(s) 803, 1792, 1827
Bbv12I GWGCWC 3 cut(s) 506, 768, 1129
BbvCI CCTCAGC 1 cut(s) 165
BccI CCATC 6 cut(s) 31, 118, 878, 1286, 1420, 1468
BciT130I CCWGG 6 cut(s) 315, 425, 972, 1161, 1479, 1740
BclI TGATCA 1 cut(s) 1048
BcoDI GTCTC 5 cut(s) 261, 406, 1048, 1520, 1806
BfaI CTAG 2 cut(s) 657, 1701
BfmI CTRYAG 7 cut(s) 535, 840, 1428, 1434, 1440, 1446, 1719
BfoI RGCGCY 1 cut(s) 110
BfuAI ACCTGC 1 cut(s) 969
Bme1390I CCNGG 6 cut(s) 315, 425, 972, 1161, 1479, 1740
Bme18I GGWCC 1 cut(s) 1690
BmeRI GACNNNNNGTC 1 cut(s) 398
BmeT110I CYCGRG 1 cut(s) 99
BmgT120I GGNCC 4 cut(s) 144, 388, 1029, 1690
BmiI GGNNCC 3 cut(s) 108, 1013, 1692
BmrFI CCNGG 6 cut(s) 315, 425, 972, 1161, 1479, 1740
BmrI ACTGGG 2 cut(s) 282, 1030
BmsI GCATC 4 cut(s) 134, 619, 641, 1616
BmuI ACTGGG 2 cut(s) 282, 1030
BpiI GAAGAC 3 cut(s) 803, 1792, 1827
BplI GAGNNNNNCTC 2 cut(s) 1517, 1549
BpmI CTGGAG 2 cut(s) 252, 1582
Bpu10I CCTNAGC 2 cut(s) 165, 989
Bpu14I TTCGAA 1 cut(s) 933
BpuEI CTTGAG 2 cut(s) 1381, 1551
BsaBI GATNNNNATC 1 cut(s) 282
BsaHI GRCGYC 1 cut(s) 107
BsaJI CCNNGG 5 cut(s) 1092, 1160, 1477, 1738, 1744
BsaXI ACNNNNNCTCC 2 cut(s) 1393, 1423
Bsc4I CCNNNNNNNGG 4 cut(s) 1021, 1136, 1492, 1745
Bse1I ACTGG 7 cut(s) 205, 288, 807, 1025, 1534, 1587, 1599
Bse21I CCTNAGG 1 cut(s) 51
Bse3DI GCAATG 2 cut(s) 1342, 1785
Bse8I GATNNNNATC 1 cut(s) 282
BseBI CCWGG 6 cut(s) 315, 425, 972, 1161, 1479, 1740
BseDI CCNNGG 5 cut(s) 1092, 1160, 1477, 1738, 1744
BseGI GGATG 5 cut(s) 110, 1081, 1297, 1460, 1501
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 4 cut(s) 1021, 1136, 1492, 1745
BseMI GCAATG 2 cut(s) 1342, 1785
BseMII CTCAG 5 cut(s) 42, 87, 93, 179, 1170
BseNI ACTGG 7 cut(s) 205, 288, 807, 1025, 1534, 1587, 1599
BseRI GAGGAG 4 cut(s) 68, 806, 860, 1538
BseSI GKGCMC 2 cut(s) 768, 1016
BseYI CCCAGC 1 cut(s) 487
BsgI GTGCAG 1 cut(s) 384
BshFI GGCC 7 cut(s) 132, 146, 389, 1030, 1485, 1743, 1784
BshNI GGYRCC 2 cut(s) 106, 1011
BsiHKAI GWGCWC 3 cut(s) 506, 768, 1129
BsiHKCI CYCGRG 1 cut(s) 99
BslFI GGGAC 3 cut(s) 1676, 1721, 1762
BslI CCNNNNNNNGG 4 cut(s) 1021, 1136, 1492, 1745
BsmAI GTCTC 5 cut(s) 261, 406, 1048, 1520, 1806
BsmBI CGTCTC 1 cut(s) 1806
BsmFI GGGAC 3 cut(s) 1676, 1721, 1762
BsnI GGCC 7 cut(s) 132, 146, 389, 1030, 1485, 1743, 1784
BsoBI CYCGRG 1 cut(s) 99
Bsp119I TTCGAA 1 cut(s) 933
Bsp1286I GDGCHC 4 cut(s) 506, 768, 1016, 1129
Bsp143I GATC 7 cut(s) 83, 283, 1048, 1078, 1213, 1453, 1624
BspACI CCGC 2 cut(s) 1605, 1785
BspANI GGCC 7 cut(s) 132, 146, 389, 1030, 1485, 1743, 1784
BspCNI CTCAG 5 cut(s) 43, 86, 92, 178, 1171
BspHI TCATGA 1 cut(s) 1210
BspLI GGNNCC 3 cut(s) 108, 1013, 1692
BspMAI CTGCAG 6 cut(s) 844, 1432, 1438, 1444, 1450, 1723
BspMI ACCTGC 1 cut(s) 969
BspPI GGATC 3 cut(s) 91, 278, 1448
BspQI GCTCTTC 1 cut(s) 1540
BspT104I TTCGAA 1 cut(s) 933
BspT107I GGYRCC 2 cut(s) 106, 1011
BsrDI GCAATG 2 cut(s) 1342, 1785
BsrI ACTGG 7 cut(s) 205, 288, 807, 1025, 1534, 1587, 1599
BssECI CCNNGG 5 cut(s) 1092, 1160, 1477, 1738, 1744
BssMI GATC 7 cut(s) 83, 283, 1048, 1078, 1213, 1453, 1624
BssNAI GTATAC 1 cut(s) 601
BssNI GRCGYC 1 cut(s) 107
BssT1I CCWWGG 2 cut(s) 1092, 1744
Bst1107I GTATAC 1 cut(s) 601
Bst2UI CCWGG 6 cut(s) 315, 425, 972, 1161, 1479, 1740
Bst4CI ACNGT 5 cut(s) 213, 770, 959, 1042, 1582
Bst6I CTCTTC 3 cut(s) 358, 866, 1540
BstACI GRCGYC 1 cut(s) 107
BstBI TTCGAA 1 cut(s) 933
BstC8I GCNNGC 4 cut(s) 226, 986, 1551, 1647
BstDEI CTNAG 8 cut(s) 51, 73, 79, 119, 165, 357, 989, 1179
BstF5I GGATG 5 cut(s) 110, 1081, 1297, 1460, 1501
BstH2I RGCGCY 1 cut(s) 110
BstHHI GCGC 2 cut(s) 109, 252
BstKTI GATC 7 cut(s) 86, 286, 1051, 1081, 1216, 1456, 1627
BstMAI GTCTC 5 cut(s) 261, 406, 1048, 1520, 1806
BstMBI GATC 7 cut(s) 83, 283, 1048, 1078, 1213, 1453, 1624
BstNI CCWGG 6 cut(s) 315, 425, 972, 1161, 1479, 1740
BstNSI RCATGY 2 cut(s) 398, 988
BstSCI CCNGG 6 cut(s) 313, 423, 970, 1159, 1477, 1738
BstSFI CTRYAG 7 cut(s) 535, 840, 1428, 1434, 1440, 1446, 1719
BstSLI GKGCMC 2 cut(s) 768, 1016
BstV2I GAAGAC 3 cut(s) 803, 1792, 1827
BstXI CCANNNNNNTGG 1 cut(s) 1288
BstZ17I GTATAC 1 cut(s) 601
Bsu36I CCTNAGG 1 cut(s) 51
BsuRI GGCC 7 cut(s) 132, 146, 389, 1030, 1485, 1743, 1784
BtsCI GGATG 5 cut(s) 110, 1081, 1297, 1460, 1501
BtsI GCAGTG 1 cut(s) 372
BtsIMutI CAGTG 4 cut(s) 295, 372, 766, 1362
BveI ACCTGC 1 cut(s) 969
Cac8I GCNNGC 4 cut(s) 226, 986, 1551, 1647
CciI TCATGA 1 cut(s) 1210
CfoI GCGC 2 cut(s) 109, 252
Cfr13I GGNCC 4 cut(s) 144, 388, 1029, 1690
CseI GACGC 1 cut(s) 1430
CsiI ACCWGGT 1 cut(s) 313
Csp6I GTAC 4 cut(s) 592, 919, 1401, 1590
CviAII CATG 5 cut(s) 141, 395, 547, 985, 1211
CviQI GTAC 4 cut(s) 592, 919, 1401, 1590
DdeI CTNAG 8 cut(s) 51, 73, 79, 119, 165, 357, 989, 1179
DinI GGCGCC 1 cut(s) 108
DpnI GATC 7 cut(s) 85, 285, 1050, 1080, 1215, 1455, 1626
DpnII GATC 7 cut(s) 83, 283, 1048, 1078, 1213, 1453, 1624
DriI GACNNNNNGTC 1 cut(s) 398
EaeI YGGCCR 1 cut(s) 1782
Eam1104I CTCTTC 3 cut(s) 358, 866, 1540
Eam1105I GACNNNNNGTC 1 cut(s) 398
EarI CTCTTC 3 cut(s) 358, 866, 1540
Ecl136II GAGCTC 1 cut(s) 504
Eco130I CCWWGG 2 cut(s) 1092, 1744
Eco147I AGGCCT 1 cut(s) 1743
Eco24I GRGCYC 1 cut(s) 506
Eco32I GATATC 1 cut(s) 804
Eco47I GGWCC 1 cut(s) 1690
Eco53kI GAGCTC 1 cut(s) 504
Eco57I CTGAAG 2 cut(s) 21, 1128
Eco81I CCTNAGG 1 cut(s) 51
Eco88I CYCGRG 1 cut(s) 99
EcoICRI GAGCTC 1 cut(s) 504
EcoO109I RGGNCCY 1 cut(s) 1690
EcoRII CCWGG 6 cut(s) 313, 423, 970, 1159, 1477, 1738
EcoRV GATATC 1 cut(s) 804
EcoT14I CCWWGG 2 cut(s) 1092, 1744
EcoT22I ATGCAT 1 cut(s) 634
EcoT38I GRGCYC 1 cut(s) 506
EgeI GGCGCC 1 cut(s) 108
EheI GGCGCC 1 cut(s) 108
ErhI CCWWGG 2 cut(s) 1092, 1744
Esp3I CGTCTC 1 cut(s) 1806
FaeI CATG 5 cut(s) 144, 398, 550, 988, 1214
FaqI GGGAC 3 cut(s) 1676, 1721, 1762
FatI CATG 5 cut(s) 140, 394, 546, 984, 1210
FbaI TGATCA 1 cut(s) 1048
FblI GTMKAC 2 cut(s) 348, 600
FokI GGATG 5 cut(s) 97, 1068, 1304, 1447, 1508
FriOI GRGCYC 1 cut(s) 506
FspBI CTAG 2 cut(s) 657, 1701
GlaI GCGC 2 cut(s) 108, 251
GsaI CCCAGC 1 cut(s) 491
GsuI CTGGAG 2 cut(s) 252, 1582
HaeII RGCGCY 1 cut(s) 110
HaeIII GGCC 7 cut(s) 132, 146, 389, 1030, 1485, 1743, 1784
HgaI GACGC 1 cut(s) 1430
HhaI GCGC 2 cut(s) 109, 252
Hin1I GRCGYC 1 cut(s) 107
Hin1II CATG 5 cut(s) 144, 398, 550, 988, 1214
Hin6I GCGC 2 cut(s) 107, 250
HinP1I GCGC 2 cut(s) 107, 250
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HinfI GANTC 8 cut(s) 5, 11, 77, 350, 483, 848, 1679, 1750
HphI GGTGA 5 cut(s) 24, 451, 506, 971, 1202
Hpy166II GTNNAC 3 cut(s) 349, 601, 766
Hpy188III TCNNGA 5 cut(s) 50, 81, 101, 207, 1211
Hpy8I GTNNAC 3 cut(s) 349, 601, 766
HpyAV CCTTC 4 cut(s) 45, 331, 638, 1129
HpyCH4III ACNGT 5 cut(s) 213, 770, 959, 1042, 1582
HpyCH4IV ACGT 2 cut(s) 921, 937
HpyF3I CTNAG 8 cut(s) 51, 73, 79, 119, 165, 357, 989, 1179
HpySE526I ACGT 2 cut(s) 921, 937
Hsp92I GRCGYC 1 cut(s) 107
Hsp92II CATG 5 cut(s) 144, 398, 550, 988, 1214
HspAI GCGC 2 cut(s) 107, 250
KasI GGCGCC 1 cut(s) 106
Ksp22I TGATCA 1 cut(s) 1048
Kzo9I GATC 7 cut(s) 83, 283, 1048, 1078, 1213, 1453, 1624
LguI GCTCTTC 1 cut(s) 1540
LmnI GCTCC 5 cut(s) 52, 55, 271, 1132, 1165
LweI GCATC 4 cut(s) 134, 619, 641, 1616
MabI ACCWGGT 1 cut(s) 313
MaeI CTAG 2 cut(s) 657, 1701
MaeII ACGT 2 cut(s) 921, 937
MaeIII GTNAC 1 cut(s) 1190
MalI GATC 7 cut(s) 85, 285, 1050, 1080, 1215, 1455, 1626
MboI GATC 7 cut(s) 83, 283, 1048, 1078, 1213, 1453, 1624
MfeI CAATTG 1 cut(s) 852
MhlI GDGCHC 4 cut(s) 506, 768, 1016, 1129
MluCI AATT 7 cut(s) 159, 330, 679, 690, 852, 1756, 1769
Mly113I GGCGCC 1 cut(s) 107
MlyI GAGTC 5 cut(s) 71, 344, 857, 1673, 1744
MmeI TCCRAC 2 cut(s) 221, 1708
Mph1103I ATGCAT 1 cut(s) 634
MseI TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1640, 1773
MslI CAYNNNNRTG 2 cut(s) 1209, 1250
MspA1I CMGCKG 7 cut(s) 491, 1433, 1439, 1445, 1451, 1724, 1787
MspR9I CCNGG 6 cut(s) 315, 425, 972, 1161, 1479, 1740
MunI CAATTG 1 cut(s) 852
MvaI CCWGG 6 cut(s) 315, 425, 972, 1161, 1479, 1740
NarI GGCGCC 1 cut(s) 107
NdeII GATC 7 cut(s) 83, 283, 1048, 1078, 1213, 1453, 1624
NlaIII CATG 5 cut(s) 144, 398, 550, 988, 1214
NlaIV GGNNCC 3 cut(s) 108, 1013, 1692
NmuCI GTSAC 1 cut(s) 1190
NsiI ATGCAT 1 cut(s) 634
NspI RCATGY 2 cut(s) 398, 988
NspV TTCGAA 1 cut(s) 933
PaeI GCATGC 1 cut(s) 988
PagI TCATGA 1 cut(s) 1210
PaqCI CACCTGC 1 cut(s) 969
PceI AGGCCT 1 cut(s) 1743
PciI ACATGT 1 cut(s) 394
PciSI GCTCTTC 1 cut(s) 1540
PfeI GAWTC 3 cut(s) 5, 11, 483
PflMI CCANNNNNTGG 1 cut(s) 1745
PleI GAGTC 5 cut(s) 71, 344, 856, 1673, 1744
PluTI GGCGCC 1 cut(s) 110
PpsI GAGTC 5 cut(s) 71, 344, 856, 1673, 1744
PpuMI RGGWCCY 1 cut(s) 1690
PscI ACATGT 1 cut(s) 394
PsiI TTATAA 1 cut(s) 1329
Psp124BI GAGCTC 1 cut(s) 506
Psp5II RGGWCCY 1 cut(s) 1690
Psp6I CCWGG 6 cut(s) 313, 423, 970, 1159, 1477, 1738
PspFI CCCAGC 1 cut(s) 487
PspGI CCWGG 6 cut(s) 313, 423, 970, 1159, 1477, 1738
PspN4I GGNNCC 3 cut(s) 108, 1013, 1692
PspPI GGNCC 4 cut(s) 144, 388, 1029, 1690
PspPPI RGGWCCY 1 cut(s) 1690
PstI CTGCAG 6 cut(s) 844, 1432, 1438, 1444, 1450, 1723
PvuII CAGCTG 6 cut(s) 491, 1433, 1439, 1445, 1451, 1724
RsaI GTAC 4 cut(s) 593, 920, 1402, 1591
RsaNI GTAC 4 cut(s) 592, 919, 1401, 1590
RseI CAYNNNNRTG 2 cut(s) 1209, 1250
SacI GAGCTC 1 cut(s) 506
SalI GTCGAC 1 cut(s) 347
SapI GCTCTTC 1 cut(s) 1540
SaqAI TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1640, 1773
Sau3AI GATC 7 cut(s) 83, 283, 1048, 1078, 1213, 1453, 1624
Sau96I GGNCC 4 cut(s) 144, 388, 1029, 1690
SchI GAGTC 5 cut(s) 71, 344, 857, 1673, 1744
ScrFI CCNGG 6 cut(s) 315, 425, 972, 1161, 1479, 1740
SduI GDGCHC 4 cut(s) 506, 768, 1016, 1129
SexAI ACCWGGT 1 cut(s) 313
SfaNI GCATC 4 cut(s) 134, 619, 641, 1616
SfcI CTRYAG 7 cut(s) 535, 840, 1428, 1434, 1440, 1446, 1719
SfoI GGCGCC 1 cut(s) 108
SfuI TTCGAA 1 cut(s) 933
SinI GGWCC 1 cut(s) 1690
SmiMI CAYNNNNRTG 2 cut(s) 1209, 1250
SmlI CTYRAG 2 cut(s) 1396, 1566
SmoI CTYRAG 2 cut(s) 1396, 1566
SphI GCATGC 1 cut(s) 988
Sse9I AATT 7 cut(s) 159, 330, 679, 690, 852, 1756, 1769
SseBI AGGCCT 1 cut(s) 1743
SsiI CCGC 2 cut(s) 1605, 1785
SspDI GGCGCC 1 cut(s) 106
SspI AATATT 1 cut(s) 929
SspMI CTAG 2 cut(s) 657, 1701
SstI GAGCTC 1 cut(s) 506
StuI AGGCCT 1 cut(s) 1743
StyD4I CCNGG 6 cut(s) 313, 423, 970, 1159, 1477, 1738
StyI CCWWGG 2 cut(s) 1092, 1744
TaaI ACNGT 5 cut(s) 213, 770, 959, 1042, 1582
TaiI ACGT 2 cut(s) 924, 940
TaqI TCGA 3 cut(s) 348, 715, 933
TasI AATT 7 cut(s) 159, 330, 679, 690, 852, 1756, 1769
TatI WGTACW 1 cut(s) 591
TauI GCSGC 1 cut(s) 1787
TfiI GAWTC 3 cut(s) 5, 11, 483
Tru1I TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1640, 1773
Tru9I TTAA 8 cut(s) 42, 384, 561, 824, 944, 1274, 1640, 1773
TscAI CASTG 4 cut(s) 295, 372, 773, 1369
TseFI GTSAC 1 cut(s) 1190
Tsp45I GTSAC 1 cut(s) 1190
TspDTI ATGAA 3 cut(s) 683, 1199, 1404
TspGWI ACGGA 1 cut(s) 1691
TspRI CASTG 4 cut(s) 295, 372, 773, 1369
Van91I CCANNNNNTGG 1 cut(s) 1745
VneI GTGCAC 1 cut(s) 764
VpaK11BI GGWCC 1 cut(s) 1690
XapI RAATTY 3 cut(s) 159, 1756, 1769
XceI RCATGY 2 cut(s) 398, 988
XcmI CCANNNNNNNNNTGG 1 cut(s) 1285
XmiI GTMKAC 2 cut(s) 348, 600
XspI CTAG 2 cut(s) 657, 1701
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.