Protein TIC 40, chloroplastic-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16620 |
| fragaria_vesca | FvH4_2g09382 FvH4_7g07530 FvH4_7g07530 FvH4_7g07530 |
| malus_domestica | MD02G1235900.v1.1 MD07G1079600.v1.1 |
| prunus_persica | Prupe.2G102700_v2.0.a1 |
| pyrus_communis | pycom02g20260 pycom02g20320 pycom07g06340 |
| rosa_chinensis | RchiOBHm_Chr1g0339281 |
| rosa_laevigata | RLG00000029223 |
| rosa_multiflora | Rmu_sc0001248.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00313410 |
| rosa_rugosa | Rorug01G0143200.1 Rorug01G0143300.1 |
| rosa_samantha | Rh1AG160100 Rh1BG126900 Rh1CG149400 |
| rosa_wichuraiana | Rw1G013500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 358 |
| Acc36I | ACCTGC | 1 cut(s) | 358 |
| AciI | CCGC | 2 cut(s) | 95, 110 |
| AclWI | GGATC | 1 cut(s) | 61 |
| AgsI | TTSAA | 1 cut(s) | 151 |
| AluBI | AGCT | 4 cut(s) | 146, 239, 433, 455 |
| AluI | AGCT | 4 cut(s) | 146, 239, 433, 455 |
| AlwI | GGATC | 1 cut(s) | 61 |
| AoxI | GGCC | 1 cut(s) | 163 |
| ApeKI | GCWGC | 1 cut(s) | 200 |
| AspS9I | GGNCC | 1 cut(s) | 163 |
| AsuC2I | CCSGG | 1 cut(s) | 213 |
| AsuHPI | GGTGA | 1 cut(s) | 312 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 282, 315 |
| BbvI | GCAGC | 1 cut(s) | 187 |
| BccI | CCATC | 3 cut(s) | 154, 241, 292 |
| BcnI | CCSGG | 1 cut(s) | 213 |
| BfmI | CTRYAG | 1 cut(s) | 48 |
| BfuAI | ACCTGC | 1 cut(s) | 358 |
| BisI | GCNGC | 2 cut(s) | 111, 201 |
| BlsI | GCNGC | 2 cut(s) | 112, 202 |
| Bme1390I | CCNGG | 1 cut(s) | 213 |
| BmgT120I | GGNCC | 1 cut(s) | 163 |
| BmiI | GGNNCC | 1 cut(s) | 217 |
| BmrFI | CCNGG | 1 cut(s) | 213 |
| BmsI | GCATC | 1 cut(s) | 254 |
| BpmI | CTGGAG | 1 cut(s) | 225 |
| BpuMI | CCSGG | 1 cut(s) | 213 |
| BsaBI | GATNNNNATC | 1 cut(s) | 414 |
| Bse1I | ACTGG | 1 cut(s) | 187 |
| Bse3DI | GCAATG | 1 cut(s) | 202 |
| Bse8I | GATNNNNATC | 1 cut(s) | 414 |
| BseJI | GATNNNNATC | 1 cut(s) | 414 |
| BseMI | GCAATG | 1 cut(s) | 202 |
| BseMII | CTCAG | 2 cut(s) | 39, 420 |
| BseNI | ACTGG | 1 cut(s) | 187 |
| BseXI | GCAGC | 1 cut(s) | 187 |
| BshFI | GGCC | 1 cut(s) | 165 |
| BsiSI | CCGG | 1 cut(s) | 212 |
| BsnI | GGCC | 1 cut(s) | 165 |
| Bsp143I | GATC | 1 cut(s) | 53 |
| BspACI | CCGC | 2 cut(s) | 95, 110 |
| BspANI | GGCC | 1 cut(s) | 165 |
| BspCNI | CTCAG | 2 cut(s) | 38, 421 |
| BspLI | GGNNCC | 1 cut(s) | 217 |
| BspMI | ACCTGC | 1 cut(s) | 358 |
| BspPI | GGATC | 1 cut(s) | 61 |
| BsrDI | GCAATG | 1 cut(s) | 202 |
| BsrI | ACTGG | 1 cut(s) | 187 |
| BssMI | GATC | 1 cut(s) | 53 |
| Bst4CI | ACNGT | 1 cut(s) | 42 |
| BstDEI | CTNAG | 3 cut(s) | 25, 429, 434 |
| BstKTI | GATC | 1 cut(s) | 56 |
| BstMBI | GATC | 1 cut(s) | 53 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 92, 332 |
| BstSCI | CCNGG | 1 cut(s) | 211 |
| BstSFI | CTRYAG | 1 cut(s) | 48 |
| BstV1I | GCAGC | 1 cut(s) | 187 |
| BsuRI | GGCC | 1 cut(s) | 165 |
| BtgZI | GCGATG | 1 cut(s) | 231 |
| BveI | ACCTGC | 1 cut(s) | 358 |
| Cfr13I | GGNCC | 1 cut(s) | 163 |
| CviAII | CATG | 1 cut(s) | 105 |
| CviJI | RGCY | 8 cut(s) | 113, 146, 165, 239, 326, 335, 433, 455 |
| CviKI_1 | RGCY | 8 cut(s) | 113, 146, 165, 239, 326, 335, 433, 455 |
| DdeI | CTNAG | 3 cut(s) | 25, 429, 434 |
| DpnI | GATC | 1 cut(s) | 55 |
| DpnII | GATC | 1 cut(s) | 53 |
| FaeI | CATG | 1 cut(s) | 108 |
| FaiI | YATR | 3 cut(s) | 50, 106, 132 |
| FatI | CATG | 1 cut(s) | 104 |
| Fnu4HI | GCNGC | 2 cut(s) | 111, 201 |
| Fsp4HI | GCNGC | 2 cut(s) | 111, 201 |
| GluI | GCNGC | 2 cut(s) | 111, 201 |
| GsuI | CTGGAG | 1 cut(s) | 225 |
| HaeIII | GGCC | 1 cut(s) | 165 |
| HapII | CCGG | 1 cut(s) | 212 |
| Hin1II | CATG | 1 cut(s) | 108 |
| HindIII | AAGCTT | 1 cut(s) | 144 |
| HinfI | GANTC | 2 cut(s) | 317, 438 |
| HpaII | CCGG | 1 cut(s) | 212 |
| HphI | GGTGA | 1 cut(s) | 312 |
| Hpy166II | GTNNAC | 1 cut(s) | 45 |
| Hpy188III | TCNNGA | 2 cut(s) | 151, 419 |
| Hpy8I | GTNNAC | 1 cut(s) | 45 |
| HpyAV | CCTTC | 2 cut(s) | 261, 351 |
| HpyCH4III | ACNGT | 1 cut(s) | 42 |
| HpyCH4V | TGCA | 4 cut(s) | 139, 203, 305, 448 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 92, 332 |
| HpyF3I | CTNAG | 3 cut(s) | 25, 429, 434 |
| Hsp92II | CATG | 1 cut(s) | 108 |
| Kzo9I | GATC | 1 cut(s) | 53 |
| LmnI | GCTCC | 1 cut(s) | 244 |
| LpnPI | CCDG | 8 cut(s) | 99, 179, 200, 225, 255, 336, 363, 432 |
| Lsp1109I | GCAGC | 1 cut(s) | 187 |
| LweI | GCATC | 1 cut(s) | 254 |
| MalI | GATC | 1 cut(s) | 55 |
| MboI | GATC | 1 cut(s) | 53 |
| MboII | GAAGA | 2 cut(s) | 383, 434 |
| MluCI | AATT | 1 cut(s) | 20 |
| MlyI | GAGTC | 1 cut(s) | 447 |
| MnlI | CCTC | 4 cut(s) | 42, 268, 286, 337 |
| MseI | TTAA | 2 cut(s) | 414, 457 |
| MspI | CCGG | 1 cut(s) | 212 |
| MspR9I | CCNGG | 1 cut(s) | 213 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 92, 332 |
| NciI | CCSGG | 1 cut(s) | 213 |
| NdeII | GATC | 1 cut(s) | 53 |
| NlaIII | CATG | 1 cut(s) | 108 |
| NlaIV | GGNNCC | 1 cut(s) | 217 |
| PaqCI | CACCTGC | 1 cut(s) | 358 |
| PfeI | GAWTC | 1 cut(s) | 317 |
| PkrI | GCNGC | 2 cut(s) | 112, 202 |
| PleI | GAGTC | 1 cut(s) | 446 |
| PpsI | GAGTC | 1 cut(s) | 446 |
| PspN4I | GGNNCC | 1 cut(s) | 217 |
| PspPI | GGNCC | 1 cut(s) | 163 |
| SaqAI | TTAA | 2 cut(s) | 414, 457 |
| SatI | GCNGC | 2 cut(s) | 111, 201 |
| Sau3AI | GATC | 1 cut(s) | 53 |
| Sau96I | GGNCC | 1 cut(s) | 163 |
| SchI | GAGTC | 1 cut(s) | 447 |
| ScrFI | CCNGG | 1 cut(s) | 213 |
| SetI | ASST | 6 cut(s) | 34, 148, 241, 352, 435, 457 |
| SfaNI | GCATC | 1 cut(s) | 254 |
| SfcI | CTRYAG | 1 cut(s) | 48 |
| Sse9I | AATT | 1 cut(s) | 20 |
| SsiI | CCGC | 2 cut(s) | 95, 110 |
| StyD4I | CCNGG | 1 cut(s) | 211 |
| TaaI | ACNGT | 1 cut(s) | 42 |
| TaqI | TCGA | 1 cut(s) | 344 |
| TasI | AATT | 1 cut(s) | 20 |
| TauI | GCSGC | 1 cut(s) | 113 |
| TfiI | GAWTC | 1 cut(s) | 317 |
| Tru1I | TTAA | 2 cut(s) | 414, 457 |
| Tru9I | TTAA | 2 cut(s) | 414, 457 |
| TseI | GCWGC | 1 cut(s) | 200 |
| TspDTI | ATGAA | 3 cut(s) | 93, 185, 398 |