Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0010090

Physical Location & Seq

Genomic Coordinates Forward (+)

15852323 .. 15863078

Gene Structure 10756 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G102700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGATGTCACTGTCTGTTCCTCACTCACTTCCTCGCTCGCCTCCACTCCATTCGAACCCACCAAGAACTGCTCACTCGTTCAGTCGATTTCCTCTCTTCCGATGCTCAGCCAATCTCAGAGCCTCCAAAAATAGCCAAAATTCGAGAGTCAATGCTCGCTTCAATGCCCCTCGTCTCCCAGTTGTAGAGAAGTTAGACGTGGAACGTTTTGCAAGCATTTCTTCCTCAAGTAGTCGAGAAACATCTTCAGTTGGTGTCAACCCTCAAATCTCAGTACCTCCCCCACCCTCAAATATAGGGTCGCCTCTATTTTGGATTGGTGTTGGTGTTGGGCTTTCAGCACTATTTTCTTGGGTGGCTACAAACTTAAAGAAATATGCAATGCAACAAGCTTTTAAGACTTTGATGGGCCAAATGAATACACAAGATAGCCAGTTCAACAATGCTGCATTTCCTCCAGGTTCACCTTTTCCATTTCCCTCAGCTCCAGCATCAGGGCCTTTTGCCTCACCTTTTCCAGCTACTTCTCAACATTCGACAGTAGACGTATCTGCAACCAGAGTAGATGCAGCACCAGCAGCACCAGCCTCATCAGCCACACAAGCTGGGCAAGCCACACCAGCTACACCAACCATACCAGCCACCCCTGCCACTGATGCCAACAATGACACAGAACTAAAGAAAAAGTCGAACAGCTTTGCTTTTGTAGATGTTACTCCGGAAGAAACTGAACAAAAGAGTCCTTTCGAAAGTAGCTTAAAAGATGTTACTGAAATAGGTTCATCTAAGGATTTCCAAAATGACGTAAAATTTTCTCAGAATGGAGCTGCTTTTAAGCAGGGGTTTGGTGCCTCAACAGAGTCCCAATCTACTGGAAAAGCAAATTCTATATCAGTGGAAGCTTTGGAGAAAATGTTGGAAGATCCGACGGTGCAGAAGATGGTTTATCCCTATTTACCAGAGGAGATGAGGAATCCTTCCACTTTCAAATGGATGCTACAAAATCCACAATATCGCCAACAGCTGGAAGACATGCTAAATAATATGGGTGGAAGCAATGAATGGGACAATCGTATGATGGATTCATTGAAAAATTTTGATCTTAGCAGTCCTGAGGTTAAGCAGCAGTTTGACCAAATTGGGCTTACACCTGAGGAAGTCATTTCAAAAATAATGGCCAATCCTGAAGTTGCTATGGCATTTCAAAACCCAAGAGTTCAAGCAGCCATCATGGATTGTTCACAGAACCCGCTCAGCATTGCCAAATATCAAAATGATAAGGAGGTTATGGATGTTTTCAATAAAATATCAGAGCTCTTCCCCGGGGTGTCTGGCTCACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009528 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009657 GO:0009658 GO:0009706 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0017038 GO:0019866 GO:0031090 GO:0031897 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032991 GO:0033036 GO:0033365 GO:0034357 GO:0034613 GO:0042170 GO:0042651 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055035 GO:0055085 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098796

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

448

Amino Acids

48.59

Weight (kDa)

5.74

Isoelectric Point (pI)

53.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010090)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16620
fragaria_vesca	FvH4_2g09382 FvH4_7g07530 FvH4_7g07530 FvH4_7g07530
malus_domestica	MD02G1235900.v1.1 MD07G1079600.v1.1
prunus_persica	Prupe.2G102700_v2.0.a1
pyrus_communis	pycom02g20260 pycom02g20320 pycom07g06340
rosa_chinensis	RchiOBHm_Chr1g0339281
rosa_laevigata	RLG00000029223
rosa_multiflora	Rmu_sc0001248.1_g000002
rosa_roxburghii	Rroxscaffold_4G00313410
rosa_rugosa	Rorug01G0143200.1 Rorug01G0143300.1
rosa_samantha	Rh1AG160100 Rh1BG126900 Rh1CG149400
rosa_wichuraiana	Rw1G013500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	848
AccB7I	CCANNNNNTGG	1 cut(s)	1024
AccBSI	CCGCTC	1 cut(s)	1252
AccI	GTMKAC	1 cut(s)	543
AccIII	TCCGGA	1 cut(s)	718
AciI	CCGC	1 cut(s)	1250
AclI	AACGTT	1 cut(s)	205
AclWI	GGATC	1 cut(s)	917
AcoI	YGGCCR	1 cut(s)	1176
AcsI	RAATTY	4 cut(s)	139, 809, 883, 1093
AcuI	CTGAAG	2 cut(s)	231, 1206
AfaI	GTAC	1 cut(s)	276
AfiI	CCNNNNNNNGG	2 cut(s)	494, 1024
AgsI	TTSAA	8 cut(s)	163, 439, 988, 1090, 1167, 1205, 1220, 1300
AjiI	CACGTC	1 cut(s)	199
AjnI	CCWGG	1 cut(s)	457
Alw21I	GWGCWC	1 cut(s)	1317
Alw26I	GTCTC	1 cut(s)	179
AlwI	GGATC	1 cut(s)	917
Ama87I	CYCGRG	1 cut(s)	1322
Aor13HI	TCCGGA	1 cut(s)	718
AoxI	GGCC	3 cut(s)	409, 497, 1176
ApeKI	GCWGC	6 cut(s)	446, 569, 578, 827, 1123, 1223
ApoI	RAATTY	4 cut(s)	139, 809, 883, 1093
ArsI	GACNNNNNNTTYG	2 cut(s)	284, 316
AspS9I	GGNCC	2 cut(s)	409, 497
AsuC2I	CCSGG	2 cut(s)	1323, 1324
AsuHPI	GGTGA	3 cut(s)	456, 501, 1329
AsuII	TTCGAA	2 cut(s)	53, 747
AvaI	CYCGRG	1 cut(s)	1322
AxyI	CCTNAGG	2 cut(s)	1113, 1152
BalI	TGGCCA	1 cut(s)	1178
BanI	GGYRCC	1 cut(s)	848
BanII	GRGCYC	1 cut(s)	1317
BbsI	GAAGAC	1 cut(s)	1035
Bbv12I	GWGCWC	1 cut(s)	1317
BbvCI	CCTCAGC	1 cut(s)	481
BbvI	GCAGC	6 cut(s)	433, 581, 590, 814, 1135, 1235
BccI	CCATC	4 cut(s)	400, 934, 1072, 1235
BciT130I	CCWGG	1 cut(s)	459
BcnI	CCSGG	2 cut(s)	1323, 1324
BcoDI	GTCTC	1 cut(s)	179
BisI	GCNGC	6 cut(s)	447, 570, 579, 828, 1124, 1224
BlpI	GCTNAGC	2 cut(s)	106, 1253
BlsI	GCNGC	6 cut(s)	448, 571, 580, 829, 1125, 1225
Bme1390I	CCNGG	3 cut(s)	459, 1323, 1324
BmeT110I	CYCGRG	1 cut(s)	1322
BmgBI	CACGTC	1 cut(s)	199
BmgT120I	GGNCC	2 cut(s)	409, 497
BmiI	GGNNCC	1 cut(s)	850
BmrFI	CCNGG	3 cut(s)	459, 1323, 1324
BmrI	ACTGGG	1 cut(s)	173
BmsI	GCATC	5 cut(s)	92, 500, 556, 646, 984
BmuI	ACTGGG	1 cut(s)	173
BpiI	GAAGAC	1 cut(s)	1035
BpmI	CTGGAG	2 cut(s)	441, 471
Bpu10I	CCTNAGC	1 cut(s)	481
Bpu1102I	GCTNAGC	2 cut(s)	106, 1253
Bpu14I	TTCGAA	2 cut(s)	53, 747
BpuEI	CTTGAG	1 cut(s)	211
BpuMI	CCSGG	2 cut(s)	1323, 1324
BsaJI	CCNNGG	3 cut(s)	1321, 1322, 1323
BsaWI	WCCGGW	1 cut(s)	718
BsaXI	ACNNNNNCTCC	2 cut(s)	899, 929
Bsc4I	CCNNNNNNNGG	2 cut(s)	494, 1024
Bse1I	ACTGG	3 cut(s)	179, 433, 877
Bse21I	CCTNAGG	2 cut(s)	1113, 1152
Bse3DI	GCAATG	3 cut(s)	387, 1063, 1257
BseAI	TCCGGA	1 cut(s)	718
BseBI	CCWGG	1 cut(s)	459
BseDI	CCNNGG	3 cut(s)	1321, 1322, 1323
BseGI	GGATG	2 cut(s)	999, 1297
BseLI	CCNNNNNNNGG	2 cut(s)	494, 1024
BseMI	GCAATG	3 cut(s)	387, 1063, 1257
BseMII	CTCAG	8 cut(s)	120, 130, 285, 495, 830, 1104, 1143, 1267
BseNI	ACTGG	3 cut(s)	179, 433, 877
BseRI	GAGGAG	1 cut(s)	977
BseXI	GCAGC	6 cut(s)	433, 581, 590, 814, 1135, 1235
BseYI	CCCAGC	1 cut(s)	605
BsgI	GTGCAG	1 cut(s)	953
BshFI	GGCC	3 cut(s)	411, 499, 1178
BshNI	GGYRCC	1 cut(s)	848
BsiHKAI	GWGCWC	1 cut(s)	1317
BsiHKCI	CYCGRG	1 cut(s)	1322
BsiSI	CCGG	2 cut(s)	719, 1323
BslFI	GGGAC	2 cut(s)	847, 1079
BslI	CCNNNNNNNGG	2 cut(s)	494, 1024
BsmAI	GTCTC	1 cut(s)	179
BsmBI	CGTCTC	1 cut(s)	179
BsmFI	GGGAC	2 cut(s)	847, 1079
BsnI	GGCC	3 cut(s)	411, 499, 1178
BsoBI	CYCGRG	1 cut(s)	1322
Bsp119I	TTCGAA	2 cut(s)	53, 747
Bsp1286I	GDGCHC	1 cut(s)	1317
Bsp13I	TCCGGA	1 cut(s)	718
Bsp143I	GATC	2 cut(s)	922, 1099
Bsp1720I	GCTNAGC	2 cut(s)	106, 1253
BspACI	CCGC	1 cut(s)	1250
BspANI	GGCC	3 cut(s)	411, 499, 1178
BspCNI	CTCAG	8 cut(s)	119, 129, 284, 494, 829, 1105, 1144, 1266
BspEI	TCCGGA	1 cut(s)	718
BspLI	GGNNCC	1 cut(s)	850
BspPI	GGATC	1 cut(s)	917
BspQI	GCTCTTC	1 cut(s)	1322
BspT104I	TTCGAA	2 cut(s)	53, 747
BspT107I	GGYRCC	1 cut(s)	848
BsrBI	CCGCTC	1 cut(s)	1252
BsrDI	GCAATG	3 cut(s)	387, 1063, 1257
BsrI	ACTGG	3 cut(s)	179, 433, 877
BssECI	CCNNGG	3 cut(s)	1321, 1322, 1323
BssMI	GATC	2 cut(s)	922, 1099
Bst2UI	CCWGG	1 cut(s)	459
Bst4CI	ACNGT	3 cut(s)	12, 541, 931
Bst6I	CTCTTC	2 cut(s)	101, 1322
BstBI	TTCGAA	2 cut(s)	53, 747
BstC8I	GCNNGC	4 cut(s)	38, 157, 214, 612
BstF5I	GGATG	2 cut(s)	999, 1297
BstKTI	GATC	2 cut(s)	925, 1102
BstMAI	GTCTC	1 cut(s)	179
BstMBI	GATC	2 cut(s)	922, 1099
BstMWI	GCNNNNNNNGC	9 cut(s)	575, 578, 584, 593, 602, 611, 620, 647, 656
BstNI	CCWGG	1 cut(s)	459
BstNSI	RCATGY	1 cut(s)	1036
BstSCI	CCNGG	3 cut(s)	457, 1321, 1322
BstV1I	GCAGC	6 cut(s)	433, 581, 590, 814, 1135, 1235
BstV2I	GAAGAC	1 cut(s)	1035
BstX2I	RGATCY	1 cut(s)	922
BstXI	CCANNNNNNTGG	1 cut(s)	872
BstYI	RGATCY	1 cut(s)	922
Bsu36I	CCTNAGG	2 cut(s)	1113, 1152
BsuRI	GGCC	3 cut(s)	411, 499, 1178
BtrI	CACGTC	1 cut(s)	199
BtsCI	GGATG	2 cut(s)	999, 1297
BtsIMutI	CAGTG	3 cut(s)	8, 651, 900
Cac8I	GCNNGC	4 cut(s)	38, 157, 214, 612
Cfr13I	GGNCC	2 cut(s)	409, 497
Cfr9I	CCCGGG	1 cut(s)	1322
Csp6I	GTAC	1 cut(s)	275
CviAII	CATG	2 cut(s)	1033, 1231
CviQI	GTAC	1 cut(s)	275
DpnI	GATC	2 cut(s)	924, 1101
DpnII	GATC	2 cut(s)	922, 1099
EaeI	YGGCCR	1 cut(s)	1176
Eam1104I	CTCTTC	2 cut(s)	101, 1322
EarI	CTCTTC	2 cut(s)	101, 1322
Ecl136II	GAGCTC	1 cut(s)	1315
Eco24I	GRGCYC	1 cut(s)	1317
Eco53kI	GAGCTC	1 cut(s)	1315
Eco57I	CTGAAG	2 cut(s)	231, 1206
Eco81I	CCTNAGG	2 cut(s)	1113, 1152
Eco88I	CYCGRG	1 cut(s)	1322
EcoICRI	GAGCTC	1 cut(s)	1315
EcoO109I	RGGNCCY	1 cut(s)	497
EcoRII	CCWGG	1 cut(s)	457
EcoT38I	GRGCYC	1 cut(s)	1317
Esp3I	CGTCTC	1 cut(s)	179
FaeI	CATG	2 cut(s)	1036, 1234
FalI	AAGNNNNNCTT	2 cut(s)	205, 237
FaqI	GGGAC	2 cut(s)	847, 1079
FatI	CATG	2 cut(s)	1032, 1230
FauI	CCCGC	1 cut(s)	1257
FblI	GTMKAC	1 cut(s)	543
Fnu4HI	GCNGC	6 cut(s)	447, 570, 579, 828, 1124, 1224
FokI	GGATG	2 cut(s)	1006, 1304
FriOI	GRGCYC	1 cut(s)	1317
Fsp4HI	GCNGC	6 cut(s)	447, 570, 579, 828, 1124, 1224
GluI	GCNGC	6 cut(s)	447, 570, 579, 828, 1124, 1224
GsaI	CCCAGC	1 cut(s)	609
GsuI	CTGGAG	2 cut(s)	441, 471
HaeIII	GGCC	3 cut(s)	411, 499, 1178
HapII	CCGG	2 cut(s)	719, 1323
Hin1II	CATG	2 cut(s)	1036, 1234
HincII	GTYRAC	1 cut(s)	259
HindII	GTYRAC	1 cut(s)	259
HindIII	AAGCTT	2 cut(s)	390, 900
HinfI	GANTC	5 cut(s)	147, 739, 860, 973, 1082
HpaII	CCGG	2 cut(s)	719, 1323
HphI	GGTGA	3 cut(s)	456, 501, 1329
Hpy166II	GTNNAC	4 cut(s)	259, 464, 544, 1241
Hpy188I	TCNGA	5 cut(s)	101, 119, 819, 927, 1312
Hpy188III	TCNNGA	5 cut(s)	144, 236, 719, 1112, 1184
Hpy8I	GTNNAC	4 cut(s)	259, 464, 544, 1241
Hpy99I	CGWCG	1 cut(s)	931
HpyAV	CCTTC	1 cut(s)	987
HpyCH4III	ACNGT	3 cut(s)	12, 541, 931
HpyCH4IV	ACGT	4 cut(s)	198, 205, 546, 804
HpyCH4V	TGCA	7 cut(s)	212, 380, 385, 449, 554, 569, 934
HpyF10VI	GCNNNNNNNGC	9 cut(s)	575, 578, 584, 593, 602, 611, 620, 647, 656
HpySE526I	ACGT	4 cut(s)	198, 205, 546, 804
Hsp92II	CATG	2 cut(s)	1036, 1234
Kpn2I	TCCGGA	1 cut(s)	718
Kzo9I	GATC	2 cut(s)	922, 1099
LguI	GCTCTTC	1 cut(s)	1322
LmnI	GCTCC	2 cut(s)	490, 824
Lsp1109I	GCAGC	6 cut(s)	433, 581, 590, 814, 1135, 1235
LweI	GCATC	5 cut(s)	92, 500, 556, 646, 984
MaeII	ACGT	4 cut(s)	198, 205, 546, 804
MaeIII	GTNAC	3 cut(s)	6, 712, 766
MalI	GATC	2 cut(s)	924, 1101
MbiI	CCGCTC	1 cut(s)	1252
MboI	GATC	2 cut(s)	922, 1099
MboII	GAAGA	8 cut(s)	88, 213, 237, 734, 932, 949, 1040, 1309
MflI	RGATCY	1 cut(s)	922
MhlI	GDGCHC	1 cut(s)	1317
MlsI	TGGCCA	1 cut(s)	1178
MluCI	AATT	5 cut(s)	139, 809, 883, 1093, 1137
MluNI	TGGCCA	1 cut(s)	1178
MlyI	GAGTC	3 cut(s)	156, 748, 869
MmeI	TCCRAC	2 cut(s)	897, 950
Mox20I	TGGCCA	1 cut(s)	1178
MroI	TCCGGA	1 cut(s)	718
MscI	TGGCCA	1 cut(s)	1178
MseI	TTAA	5 cut(s)	368, 396, 758, 834, 1119
Msp20I	TGGCCA	1 cut(s)	1178
MspA1I	CMGCKG	1 cut(s)	1024
MspI	CCGG	2 cut(s)	719, 1323
MspR9I	CCNGG	3 cut(s)	459, 1323, 1324
MvaI	CCWGG	1 cut(s)	459
MwoI	GCNNNNNNNGC	9 cut(s)	575, 578, 584, 593, 602, 611, 620, 647, 656
NciI	CCSGG	2 cut(s)	1323, 1324
NdeII	GATC	2 cut(s)	922, 1099
NlaIII	CATG	2 cut(s)	1036, 1234
NlaIV	GGNNCC	1 cut(s)	850
NmuCI	GTSAC	1 cut(s)	6
NspI	RCATGY	1 cut(s)	1036
NspV	TTCGAA	2 cut(s)	53, 747
PciSI	GCTCTTC	1 cut(s)	1322
PfeI	GAWTC	2 cut(s)	973, 1082
PflMI	CCANNNNNTGG	1 cut(s)	1024
PkrI	GCNGC	6 cut(s)	448, 571, 580, 829, 1125, 1225
PleI	GAGTC	3 cut(s)	155, 747, 868
PpsI	GAGTC	3 cut(s)	155, 747, 868
Psp124BI	GAGCTC	1 cut(s)	1317
Psp1406I	AACGTT	1 cut(s)	205
Psp6I	CCWGG	1 cut(s)	457
PspFI	CCCAGC	1 cut(s)	605
PspGI	CCWGG	1 cut(s)	457
PspN4I	GGNNCC	1 cut(s)	850
PspPI	GGNCC	2 cut(s)	409, 497
PsuI	RGATCY	1 cut(s)	922
PvuII	CAGCTG	1 cut(s)	1024
RsaI	GTAC	1 cut(s)	276
RsaNI	GTAC	1 cut(s)	275
SacI	GAGCTC	1 cut(s)	1317
SapI	GCTCTTC	1 cut(s)	1322
SaqAI	TTAA	5 cut(s)	368, 396, 758, 834, 1119
SatI	GCNGC	6 cut(s)	447, 570, 579, 828, 1124, 1224
Sau3AI	GATC	2 cut(s)	922, 1099
Sau96I	GGNCC	2 cut(s)	409, 497
SchI	GAGTC	3 cut(s)	156, 748, 869
ScrFI	CCNGG	3 cut(s)	459, 1323, 1324
SduI	GDGCHC	1 cut(s)	1317
SfaNI	GCATC	5 cut(s)	92, 500, 556, 646, 984
SfuI	TTCGAA	2 cut(s)	53, 747
SmaI	CCCGGG	1 cut(s)	1324
SmlI	CTYRAG	1 cut(s)	226
SmoI	CTYRAG	1 cut(s)	226
Sse9I	AATT	5 cut(s)	139, 809, 883, 1093, 1137
SsiI	CCGC	1 cut(s)	1250
SstI	GAGCTC	1 cut(s)	1317
StyD4I	CCNGG	3 cut(s)	457, 1321, 1322
TaaI	ACNGT	3 cut(s)	12, 541, 931
TaiI	ACGT	4 cut(s)	201, 208, 549, 807
TaqI	TCGA	7 cut(s)	53, 85, 143, 235, 536, 689, 747
TasI	AATT	5 cut(s)	139, 809, 883, 1093, 1137
TfiI	GAWTC	2 cut(s)	973, 1082
Tru1I	TTAA	5 cut(s)	368, 396, 758, 834, 1119
Tru9I	TTAA	5 cut(s)	368, 396, 758, 834, 1119
TscAI	CASTG	3 cut(s)	15, 658, 900
TseFI	GTSAC	1 cut(s)	6
TseI	GCWGC	6 cut(s)	446, 569, 578, 827, 1123, 1223
Tsp45I	GTSAC	1 cut(s)	6
TspDTI	ATGAA	4 cut(s)	431, 771, 1074, 1074
TspMI	CCCGGG	1 cut(s)	1322
TspRI	CASTG	3 cut(s)	15, 658, 900
Van91I	CCANNNNNTGG	1 cut(s)	1024
XapI	RAATTY	4 cut(s)	139, 809, 883, 1093
XceI	RCATGY	1 cut(s)	1036
XmaI	CCCGGG	1 cut(s)	1322
XmiI	GTMKAC	1 cut(s)	543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.