Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0014273

Physical Location & Seq

Genomic Coordinates Forward (+)

8834447 .. 8838863

Gene Structure 4417 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g09980.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGCGCGTTCCGAGCTGTAATTGGCATTTGAAGCTCAGAGATTTATCCTCCAATGCAAAATGGGCAGAATTGCTCTGCCATTTCCATCAAGTAAACAAAGCTGGGGGGCTTCAACTACCACACTATTCAATCTTCCCTCCAATTCTCAAAGCGTGTTCAAATCTCCTTTCCCACTCCTATGGAAAATCAATACATGGGTGTCTGATCAAAAATGGGTGCGACTCATACACTTCCATTGGTAACTCCACAATGGACTTCTACATCAAAACCAAGGACCCAGATTCTGCATTGAGTGTTTTCAACTCCATGACATGGAGAGATCAAGTTTCTTGGAATATAATGGTCTATGGGAGCCTTGACGAGGGGAATTTAGAACAAGGGTTGTGGTGGTTTAACAAGGCCAGGGTTTCGGGTACCGGGTTTCGACCCAATACTTCTACTCTGGTGCTTGTAATTCAAGCCTGTCGTCGGCTTAGAGATAAATGTGAAGGACTCAAAGTACATGGCTATGTCATTCAAGCTGGGTTTTGTTGTATTTCCTCGGTTCAGAACTCGTTGTTGAGTCTGTATGCAGAAGATGATGACATGGAAAGTGCACGCAAGCTGTTCGACGAAATGTCTGAGAGAGATGTCATCTCTTGGAGTGTGATGATAGGAGGTTATGTGCGTTGCGAGGAAGCCAGAATCGGCATGGAGATGTTTCGAAAGATGGTGTGTGAGGTTGGTGTGGAACCGGATGGTGTAACGGCGGTCAGTGTTCTTAAGGGTTGCACTAGTTTGAGGGAGTTGACCATAGGGACATTACTTCATGGGTTGGTGATCTGTAGAGGGTTAGATTCTGATCTTTTTGTTGGAAACTCTTTGATTGATATGTATGCCAAGTGTCATGATGCGGATTCTGCCTTTAAAGTTTTCAAGGAGATGCCGCAAAGAAATAGGGTGTCATGGAATTCCATATTGTCTGCATTTGTCCATAATGAGAGGTACATGGATGCCCTGTCACTGTTTCATTCTATGGGGAAGGAAGGTATCAATGCCGATGAAGTGACTCTGGTGAATATTCTTCAAGCCTGCAAGCATCTGCGCCTAGTTCATTGCAAGTCTGTGCACTGTGTAACAATCAGGTGGGGATTTGACTCCAATGAGTTGATCCTAAATTCTCTCATTGATGCTTATGCAAAGTGCAATTGTATCGAGCTTGCATGGAAACTTTTTGAGAGGATGCAGAAAAGAGATGCGGTTTCGTGGAGCACTATGATTGCAGGGTTTACTCATTGTGGCAGACCTGATCAAGCAATTGCCTTATTTGGTGAGATGGCCAGACTACATGCACAGGATGATCAGAAGCCCAATGAGATTACAATCATAAATCTCTTTGAAGCTTGCGCAGTTTCAGCCGAATTGAATTGGGCGAAAGGGGCACATGGTATTGCTATTAGAAGAGGTTTGGCAGCTGGAGATCAAGTAGCTGTCGGAACTGCAACTGTTGACATGTACTCAAAATGTGGGGCAATAGGTGAATCAAGAAAGGCATTCGACCAGATTTCTGGAAAGAACATTATGTCGTGGAGTGCCCTGATAGCTGCATATGGCATGAACGGTCTTGCACACAAAGCTTTAGCTTTGGTTGAGGAAATGAAGCTGTATGCTGTGAAGCCAAATGCAGTGACTACCCTTTCTGTGCTATCTGCATGTAGTCATGGAGGCTTAGTAGAAGAGGGTCTCTCTTTTTTCAACTCACTTGTTCAAGATCATGGTGTTGAACCAAGATTGGAACATTATGCGTGTGTTGTTGATATGTTGGGCCGAGCAGGAAAGCTCCAGATGGCTATGGATTTTATCAAGAAAATTCCACAAGGTTTAAAGGCCGTCGGGGCAAATGCTGCTTGGAGTGCATTATTGAGTGCTTGTAGAAGCTATGGGAATAGAGACATTGGTGCAGAAGCCGCTTCTCATGTCCTTGAGTTAGAGCCTGAAAGTTCAACTGGTTATTTACTTGCCTCAAGTATTTATGCAGCAGGTGGGTTGTGGGTTGATGCTGCAAGTACTAGAAGGTTGGTGAAAGAAAAAGGTGTGAAGGTTGTTGCTGGTTATAGCTTAGTTAATGTTGATAACAAGGCCTGTAGATTTAATGCTGGGAATCTTGATTGCCATTCACTAGCTGCCGGAGAGATACACTCTATGGTTGAGCTATTGCATTCTTGTATGAAGACTGAAAAGAAGAAAGTCGGTAATTTTGATATTATTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE PPR PPR_2

Protein Analysis

751

Amino Acids

82.49

Weight (kDa)

6.92

Isoelectric Point (pI)

35.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	312 - 358	2.4e-08	PPR repeat family
PPR_2	PF13041	412 - 463	7.3e-06	PPR repeat family
PPR_2	PF13041	518 - 566	1.3e-07	PPR repeat family
E_motif	PF20431	640 - 701	1.1e-08	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17210
fragaria_vesca	FvH4_2g09980 FvH4_2g09980
malus_domestica	MD05G1134800.v1.1 MD10G1139900.v1.1
prunus_persica	Prupe.8G178700_v2.0.a1
pyrus_communis	pycom10g11880
rosa_chinensis	RchiOBHm_Chr6g0266861
rosa_laevigata	RLG00000014068
rosa_multiflora	Rmu_sc0013959.1_g000001
rosa_roxburghii	Rroxscaffold_7G00201400
rosa_rugosa	Rorug06G0027700
rosa_samantha	Rh6AG148700 Rh6BG149800 Rh6CG144700 Rh6DG133900
rosa_wichuraiana	Rw6G012870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2009
Acc16I	TGCGCA	1 cut(s)	1387
Acc36I	ACCTGC	1 cut(s)	2009
Acc65I	GGTACC	1 cut(s)	413
AccB1I	GGYRCC	1 cut(s)	413
AccB7I	CCANNNNNTGG	1 cut(s)	312
AccII	CGCG	1 cut(s)	6
AciI	CCGC	5 cut(s)	749, 893, 926, 1238, 1947
AclWI	GGATC	1 cut(s)	1144
AcoI	YGGCCR	1 cut(s)	1317
AcsI	RAATTY	4 cut(s)	367, 949, 1156, 1848
AfaI	GTAC	5 cut(s)	415, 501, 986, 1496, 2047
AfiI	CCNNNNNNNGG	3 cut(s)	312, 361, 468
AflII	CTTAAG	1 cut(s)	761
AflIII	ACRYGT	1 cut(s)	1491
AhdI	GACNNNNNGTC	1 cut(s)	616
AhlI	ACTAGT	1 cut(s)	773
AjnI	CCWGG	1 cut(s)	401
Alw21I	GWGCWC	3 cut(s)	598, 1110, 1253
Alw26I	GTCTC	2 cut(s)	1727, 1923
Alw44I	GTGCAC	2 cut(s)	594, 1106
AlwI	GGATC	1 cut(s)	1144
AlwNI	CAGNNNCTG	1 cut(s)	284
AoxI	GGCC	5 cut(s)	399, 1317, 1804, 1866, 2118
ApaLI	GTGCAC	2 cut(s)	594, 1106
ApeKI	GCWGC	6 cut(s)	1451, 1583, 1883, 2015, 2039, 2162
ApoI	RAATTY	4 cut(s)	367, 949, 1156, 1848
Asp718I	GGTACC	1 cut(s)	413
AspLEI	GCGC	3 cut(s)	6, 1086, 1388
AspS9I	GGNCC	2 cut(s)	274, 1804
AsuC2I	CCSGG	1 cut(s)	418
AsuHPI	GGTGA	5 cut(s)	829, 1066, 1322, 1529, 2071
AsuII	TTCGAA	1 cut(s)	703
AvaII	GGWCC	1 cut(s)	274
BaeGI	GKGCMC	4 cut(s)	598, 1110, 1423, 1576
BalI	TGGCCA	1 cut(s)	1319
BanI	GGYRCC	1 cut(s)	413
BbsI	GAAGAC	1 cut(s)	2216
Bbv12I	GWGCWC	3 cut(s)	598, 1110, 1253
BbvI	GCAGC	6 cut(s)	1463, 1570, 1870, 2026, 2027, 2149
BccI	CCATC	5 cut(s)	93, 703, 731, 1309, 1819
BceAI	ACGGC	2 cut(s)	762, 1853
BcgI	CGANNNNNNTGC	4 cut(s)	589, 623, 1174, 1208
BciT130I	CCWGG	1 cut(s)	403
BclI	TGATCA	3 cut(s)	204, 1288, 1339
BcnI	CCSGG	1 cut(s)	418
BcoDI	GTCTC	2 cut(s)	1727, 1923
BcuI	ACTAGT	1 cut(s)	773
BfaI	CTAG	4 cut(s)	774, 1088, 2049, 2159
BfmI	CTRYAG	2 cut(s)	823, 2122
BfrI	CTTAAG	1 cut(s)	761
BfuAI	ACCTGC	1 cut(s)	2009
BglI	GCCNNNNNGGC	1 cut(s)	1874
BisI	GCNGC	8 cut(s)	926, 1452, 1584, 1884, 1947, 2016, 2040, 2163
BlsI	GCNGC	8 cut(s)	927, 1453, 1585, 1885, 1948, 2017, 2041, 2164
BmcAI	AGTACT	1 cut(s)	2047
Bme1390I	CCNGG	2 cut(s)	403, 418
Bme18I	GGWCC	1 cut(s)	274
BmeRI	GACNNNNNGTC	1 cut(s)	616
BmgT120I	GGNCC	2 cut(s)	274, 1804
BmiI	GGNNCC	4 cut(s)	276, 353, 415, 732
BmrFI	CCNGG	2 cut(s)	403, 418
BmsI	GCATC	8 cut(s)	880, 912, 982, 1087, 1159, 1212, 1225, 2026
BpiI	GAAGAC	1 cut(s)	2216
BplI	GAGNNNNNCTC	4 cut(s)	1709, 1741, 2162, 2194
BpmI	CTGGAG	2 cut(s)	1476, 1805
Bpu14I	TTCGAA	1 cut(s)	703
BpuEI	CTTGAG	2 cut(s)	1982, 1987
BpuMI	CCSGG	1 cut(s)	418
BsaBI	GATNNNNATC	2 cut(s)	840, 1361
BsaI	GGTCTC	1 cut(s)	1727
BsaJI	CCNNGG	3 cut(s)	270, 402, 540
BsaWI	WCCGGW	1 cut(s)	733
BsaXI	ACNNNNNCTCC	6 cut(s)	648, 678, 1449, 1479, 1695, 1725
Bsc4I	CCNNNNNNNGG	3 cut(s)	312, 361, 468
Bse1I	ACTGG	1 cut(s)	1990
Bse3DI	GCAATG	1 cut(s)	1093
Bse8I	GATNNNNATC	2 cut(s)	840, 1361
BseBI	CCWGG	1 cut(s)	403
BseDI	CCNNGG	3 cut(s)	270, 402, 540
BseGI	GGATG	4 cut(s)	742, 997, 1227, 1342
BseJI	GATNNNNATC	2 cut(s)	840, 1361
BseLI	CCNNNNNNNGG	3 cut(s)	312, 361, 468
BseMI	GCAATG	1 cut(s)	1093
BseMII	CTCAG	2 cut(s)	49, 612
BseNI	ACTGG	1 cut(s)	1990
BseSI	GKGCMC	4 cut(s)	598, 1110, 1423, 1576
BseXI	GCAGC	6 cut(s)	1463, 1570, 1870, 2026, 2027, 2149
BseYI	CCCAGC	3 cut(s)	101, 521, 2135
BsgI	GTGCAG	1 cut(s)	1959
Bsh1236I	CGCG	1 cut(s)	6
BshFI	GGCC	5 cut(s)	401, 1319, 1806, 1868, 2120
BshNI	GGYRCC	1 cut(s)	413
BsiHKAI	GWGCWC	3 cut(s)	598, 1110, 1253
BsiSI	CCGG	3 cut(s)	417, 734, 2166
BslFI	GGGAC	1 cut(s)	811
BslI	CCNNNNNNNGG	3 cut(s)	312, 361, 468
BsmAI	GTCTC	2 cut(s)	1727, 1923
BsmFI	GGGAC	1 cut(s)	811
BsmI	GAATGC	2 cut(s)	1532, 2197
BsnI	GGCC	5 cut(s)	401, 1319, 1806, 1868, 2120
Bso31I	GGTCTC	1 cut(s)	1727
Bsp119I	TTCGAA	1 cut(s)	703
Bsp1286I	GDGCHC	5 cut(s)	598, 1110, 1253, 1423, 1576
Bsp143I	GATC	9 cut(s)	204, 319, 819, 841, 1149, 1288, 1339, 1459, 1750
BspACI	CCGC	5 cut(s)	749, 893, 926, 1238, 1947
BspANI	GGCC	5 cut(s)	401, 1319, 1806, 1868, 2120
BspCNI	CTCAG	2 cut(s)	48, 613
BspFNI	CGCG	1 cut(s)	6
BspHI	TCATGA	1 cut(s)	886
BspLI	GGNNCC	4 cut(s)	276, 353, 415, 732
BspMI	ACCTGC	1 cut(s)	2009
BspPI	GGATC	1 cut(s)	1144
BspT104I	TTCGAA	1 cut(s)	703
BspT107I	GGYRCC	1 cut(s)	413
BspTI	CTTAAG	1 cut(s)	761
BspTNI	GGTCTC	1 cut(s)	1727
BsrDI	GCAATG	1 cut(s)	1093
BsrI	ACTGG	1 cut(s)	1990
BssECI	CCNNGG	3 cut(s)	270, 402, 540
BssMI	GATC	9 cut(s)	204, 319, 819, 841, 1149, 1288, 1339, 1459, 1750
BssT1I	CCWWGG	1 cut(s)	270
Bst2UI	CCWGG	1 cut(s)	403
Bst4CI	ACNGT	4 cut(s)	1005, 1112, 1486, 1601
Bst6I	CTCTTC	2 cut(s)	1435, 1710
BstAFI	CTTAAG	1 cut(s)	761
BstAPI	GCANNNNNTGC	1 cut(s)	1883
BstBI	TTCGAA	1 cut(s)	703
BstC8I	GCNNGC	6 cut(s)	598, 602, 1072, 1076, 1200, 1384
BstDEI	CTNAG	5 cut(s)	35, 473, 621, 1708, 2098
BstENI	CCTNNNNNAGG	1 cut(s)	359
BstF5I	GGATG	4 cut(s)	742, 997, 1227, 1342
BstFNI	CGCG	1 cut(s)	6
BstHHI	GCGC	3 cut(s)	6, 1086, 1388
BstKTI	GATC	9 cut(s)	207, 322, 822, 844, 1152, 1291, 1342, 1462, 1753
BstMAI	GTCTC	2 cut(s)	1727, 1923
BstMBI	GATC	9 cut(s)	204, 319, 819, 841, 1149, 1288, 1339, 1459, 1750
BstNI	CCWGG	1 cut(s)	403
BstNSI	RCATGY	3 cut(s)	1331, 1495, 1695
BstSCI	CCNGG	2 cut(s)	401, 416
BstSFI	CTRYAG	2 cut(s)	823, 2122
BstSLI	GKGCMC	4 cut(s)	598, 1110, 1423, 1576
BstUI	CGCG	1 cut(s)	6
BstV1I	GCAGC	6 cut(s)	1463, 1570, 1870, 2026, 2027, 2149
BstV2I	GAAGAC	1 cut(s)	2216
BstXI	CCANNNNNNTGG	2 cut(s)	179, 1547
BsuRI	GGCC	5 cut(s)	401, 1319, 1806, 1868, 2120
BtsCI	GGATG	4 cut(s)	742, 997, 1227, 1342
BtsI	GCAGTG	1 cut(s)	1671
BtsIMutI	CAGTG	4 cut(s)	760, 1001, 1108, 1671
BveI	ACCTGC	1 cut(s)	2009
Cac8I	GCNNGC	6 cut(s)	598, 602, 1072, 1076, 1200, 1384
CaiI	CAGNNNCTG	1 cut(s)	284
CciI	TCATGA	1 cut(s)	886
CfoI	GCGC	3 cut(s)	6, 1086, 1388
Cfr13I	GGNCC	2 cut(s)	274, 1804
Csp6I	GTAC	5 cut(s)	414, 500, 985, 1495, 2046
CspCI	CAANNNNNGTGG	2 cut(s)	365, 400
CviQI	GTAC	5 cut(s)	414, 500, 985, 1495, 2046
DdeI	CTNAG	5 cut(s)	35, 473, 621, 1708, 2098
DpnI	GATC	9 cut(s)	206, 321, 821, 843, 1151, 1290, 1341, 1461, 1752
DpnII	GATC	9 cut(s)	204, 319, 819, 841, 1149, 1288, 1339, 1459, 1750
DraI	TTTAAA	2 cut(s)	907, 1863
DriI	GACNNNNNGTC	1 cut(s)	616
EaeI	YGGCCR	1 cut(s)	1317
Eam1104I	CTCTTC	2 cut(s)	1435, 1710
Eam1105I	GACNNNNNGTC	1 cut(s)	616
EarI	CTCTTC	2 cut(s)	1435, 1710
Eco130I	CCWWGG	1 cut(s)	270
Eco147I	AGGCCT	1 cut(s)	2120
Eco31I	GGTCTC	1 cut(s)	1727
Eco47I	GGWCC	1 cut(s)	274
EcoNI	CCTNNNNNAGG	1 cut(s)	359
EcoO109I	RGGNCCY	1 cut(s)	274
EcoRI	GAATTC	1 cut(s)	949
EcoRII	CCWGG	1 cut(s)	401
EcoT14I	CCWWGG	1 cut(s)	270
ErhI	CCWWGG	1 cut(s)	270
FaqI	GGGAC	1 cut(s)	811
FauNDI	CATATG	1 cut(s)	1588
FbaI	TGATCA	3 cut(s)	204, 1288, 1339
Fnu4HI	GCNGC	8 cut(s)	926, 1452, 1584, 1884, 1947, 2016, 2040, 2163
FokI	GGATG	4 cut(s)	749, 1004, 1234, 1349
Fsp4HI	GCNGC	8 cut(s)	926, 1452, 1584, 1884, 1947, 2016, 2040, 2163
FspBI	CTAG	4 cut(s)	774, 1088, 2049, 2159
FspI	TGCGCA	1 cut(s)	1387
GlaI	GCGC	3 cut(s)	5, 1085, 1387
GluI	GCNGC	8 cut(s)	926, 1452, 1584, 1884, 1947, 2016, 2040, 2163
GsaI	CCCAGC	3 cut(s)	105, 525, 2139
GsuI	CTGGAG	2 cut(s)	1476, 1805
HaeIII	GGCC	5 cut(s)	401, 1319, 1806, 1868, 2120
HapII	CCGG	3 cut(s)	417, 734, 2166
HhaI	GCGC	3 cut(s)	6, 1086, 1388
Hin6I	GCGC	3 cut(s)	4, 1084, 1386
HinP1I	GCGC	3 cut(s)	4, 1084, 1386
HincII	GTYRAC	2 cut(s)	789, 1489
HindII	GTYRAC	2 cut(s)	789, 1489
HindIII	AAGCTT	2 cut(s)	1380, 1614
HpaII	CCGG	3 cut(s)	417, 734, 2166
HphI	GGTGA	5 cut(s)	829, 1066, 1322, 1529, 2071
Hpy166II	GTNNAC	6 cut(s)	94, 596, 789, 1108, 1269, 1489
Hpy188I	TCNGA	8 cut(s)	12, 38, 204, 549, 622, 841, 1344, 1475
Hpy188III	TCNNGA	7 cut(s)	887, 1524, 1548, 1748, 1822, 1843, 2144
Hpy8I	GTNNAC	6 cut(s)	94, 596, 789, 1108, 1269, 1489
Hpy99I	CGWCG	3 cut(s)	471, 614, 1874
HpyAV	CCTTC	5 cut(s)	482, 1015, 1019, 2046, 2071
HpyCH4III	ACNGT	4 cut(s)	1005, 1112, 1486, 1601
HpyF3I	CTNAG	5 cut(s)	35, 473, 621, 1708, 2098
HspAI	GCGC	3 cut(s)	4, 1084, 1386
KpnI	GGTACC	1 cut(s)	417
Ksp22I	TGATCA	3 cut(s)	204, 1288, 1339
Kzo9I	GATC	9 cut(s)	204, 319, 819, 841, 1149, 1288, 1339, 1459, 1750
LmnI	GCTCC	3 cut(s)	351, 1248, 1824
Lsp1109I	GCAGC	6 cut(s)	1463, 1570, 1870, 2026, 2027, 2149
LweI	GCATC	8 cut(s)	880, 912, 982, 1087, 1159, 1212, 1225, 2026
MaeI	CTAG	4 cut(s)	774, 1088, 2049, 2159
MaeIII	GTNAC	6 cut(s)	239, 742, 999, 1045, 1114, 1666
MalI	GATC	9 cut(s)	206, 321, 821, 843, 1151, 1290, 1341, 1461, 1752
MboI	GATC	9 cut(s)	204, 319, 819, 841, 1149, 1288, 1339, 1459, 1750
MboII	GAAGA	7 cut(s)	124, 587, 1055, 1452, 1727, 2221, 2233
MfeI	CAATTG	2 cut(s)	1186, 1296
MhlI	GDGCHC	5 cut(s)	598, 1110, 1253, 1423, 1576
MlsI	TGGCCA	1 cut(s)	1319
MluNI	TGGCCA	1 cut(s)	1319
MlyI	GAGTC	5 cut(s)	215, 486, 571, 1042, 1130
MmeI	TCCRAC	2 cut(s)	832, 1453
Mox20I	TGGCCA	1 cut(s)	1319
MscI	TGGCCA	1 cut(s)	1319
MseI	TTAA	6 cut(s)	393, 762, 906, 1862, 2103, 2130
MslI	CAYNNNNRTG	3 cut(s)	177, 507, 695
Msp20I	TGGCCA	1 cut(s)	1319
MspA1I	CMGCKG	1 cut(s)	1454
MspCI	CTTAAG	1 cut(s)	761
MspI	CCGG	3 cut(s)	417, 734, 2166
MspR9I	CCNGG	2 cut(s)	403, 418
MunI	CAATTG	2 cut(s)	1186, 1296
Mva1269I	GAATGC	2 cut(s)	1532, 2197
MvaI	CCWGG	1 cut(s)	403
MvnI	CGCG	1 cut(s)	6
NciI	CCSGG	1 cut(s)	418
NdeI	CATATG	1 cut(s)	1588
NdeII	GATC	9 cut(s)	204, 319, 819, 841, 1149, 1288, 1339, 1459, 1750
NlaIV	GGNNCC	4 cut(s)	276, 353, 415, 732
NmeAIII	GCCGAG	1 cut(s)	1832
NmuCI	GTSAC	3 cut(s)	999, 1045, 1666
NsbI	TGCGCA	1 cut(s)	1387
NspI	RCATGY	3 cut(s)	1331, 1495, 1695
NspV	TTCGAA	1 cut(s)	703
PagI	TCATGA	1 cut(s)	886
PaqCI	CACCTGC	1 cut(s)	2009
PceI	AGGCCT	1 cut(s)	2120
PciI	ACATGT	1 cut(s)	1491
PctI	GAATGC	2 cut(s)	1532, 2197
PfeI	GAWTC	6 cut(s)	281, 684, 836, 896, 1520, 2140
PflMI	CCANNNNNTGG	1 cut(s)	312
PkrI	GCNGC	8 cut(s)	927, 1453, 1585, 1885, 1948, 2017, 2041, 2164
PleI	GAGTC	5 cut(s)	215, 486, 570, 1042, 1130
PpsI	GAGTC	5 cut(s)	215, 486, 570, 1042, 1130
PpuMI	RGGWCCY	1 cut(s)	274
PscI	ACATGT	1 cut(s)	1491
Psp5II	RGGWCCY	1 cut(s)	274
Psp6I	CCWGG	1 cut(s)	401
PspFI	CCCAGC	3 cut(s)	101, 521, 2135
PspGI	CCWGG	1 cut(s)	401
PspN4I	GGNNCC	4 cut(s)	276, 353, 415, 732
PspPI	GGNCC	2 cut(s)	274, 1804
PspPPI	RGGWCCY	1 cut(s)	274
PstNI	CAGNNNCTG	1 cut(s)	284
PvuII	CAGCTG	1 cut(s)	1454
RsaI	GTAC	5 cut(s)	415, 501, 986, 1496, 2047
RsaNI	GTAC	5 cut(s)	414, 500, 985, 1495, 2046
RseI	CAYNNNNRTG	3 cut(s)	177, 507, 695
SaqAI	TTAA	6 cut(s)	393, 762, 906, 1862, 2103, 2130
SatI	GCNGC	8 cut(s)	926, 1452, 1584, 1884, 1947, 2016, 2040, 2163
Sau3AI	GATC	9 cut(s)	204, 319, 819, 841, 1149, 1288, 1339, 1459, 1750
Sau96I	GGNCC	2 cut(s)	274, 1804
ScaI	AGTACT	1 cut(s)	2047
SchI	GAGTC	5 cut(s)	215, 486, 571, 1042, 1130
ScrFI	CCNGG	2 cut(s)	403, 418
SduI	GDGCHC	5 cut(s)	598, 1110, 1253, 1423, 1576
SfaNI	GCATC	8 cut(s)	880, 912, 982, 1087, 1159, 1212, 1225, 2026
SfcI	CTRYAG	2 cut(s)	823, 2122
SfuI	TTCGAA	1 cut(s)	703
SinI	GGWCC	1 cut(s)	274
SmiMI	CAYNNNNRTG	3 cut(s)	177, 507, 695
SmlI	CTYRAG	3 cut(s)	761, 1961, 2002
SmoI	CTYRAG	3 cut(s)	761, 1961, 2002
SpeI	ACTAGT	1 cut(s)	773
SseBI	AGGCCT	1 cut(s)	2120
SsiI	CCGC	5 cut(s)	749, 893, 926, 1238, 1947
SspI	AATATT	1 cut(s)	1060
SspMI	CTAG	4 cut(s)	774, 1088, 2049, 2159
StuI	AGGCCT	1 cut(s)	2120
StyD4I	CCNGG	2 cut(s)	401, 416
StyI	CCWWGG	1 cut(s)	270
TaaI	ACNGT	4 cut(s)	1005, 1112, 1486, 1601
TaqI	TCGA	5 cut(s)	424, 609, 703, 1194, 1536
TatI	WGTACW	3 cut(s)	499, 1494, 2045
TauI	GCSGC	2 cut(s)	928, 1949
TfiI	GAWTC	6 cut(s)	281, 684, 836, 896, 1520, 2140
Tru1I	TTAA	6 cut(s)	393, 762, 906, 1862, 2103, 2130
Tru9I	TTAA	6 cut(s)	393, 762, 906, 1862, 2103, 2130
TscAI	CASTG	4 cut(s)	760, 1008, 1115, 1671
TseFI	GTSAC	3 cut(s)	999, 1045, 1666
TseI	GCWGC	6 cut(s)	1451, 1583, 1883, 2015, 2039, 2162
Tsp45I	GTSAC	3 cut(s)	999, 1045, 1666
TspDTI	ATGAA	7 cut(s)	797, 998, 1056, 1082, 1610, 1652, 2222
TspRI	CASTG	4 cut(s)	760, 1008, 1115, 1671
Van91I	CCANNNNNTGG	1 cut(s)	312
Vha464I	CTTAAG	1 cut(s)	761
VneI	GTGCAC	2 cut(s)	594, 1106
VpaK11BI	GGWCC	1 cut(s)	274
XagI	CCTNNNNNAGG	1 cut(s)	359
XapI	RAATTY	4 cut(s)	367, 949, 1156, 1848
XceI	RCATGY	3 cut(s)	1331, 1495, 1695
XcmI	CCANNNNNNNNNTGG	1 cut(s)	688
XspI	CTAG	4 cut(s)	774, 1088, 2049, 2159
ZrmI	AGTACT	1 cut(s)	2047

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.