Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0014273

Physical Location & Seq

Genomic Coordinates Reverse (-)

22461567 .. 22463843

Gene Structure 2277 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1139900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2277 bp

ATGCGCTTCCCCACGATTCCAAACCTTTCCAATTGCAATGTGAGGCTCAAAGAGCTATCATCTAATGGAAAATGGCAAGAACTACTTTGCCACCACCATGAAATCCAGAAATCTGGACTTAAACTAACAGACCCTTCAGCCTTCCCTCCAATCCTCAAAGCATGCTCGACCCTCCGCTCCTCCGCCTTTGGAAAGGCGGTGCACGGAGGCTTGATCAAGACTGGATTCGAGTCCTGCACTTCCGTGGCGAATTCCGCCATGGATTTTTACGTTAAAACAGGGGAATTGGGTTCTGCATTGTGTGTTTTTAATGGCATGAGGAGCAGAGATGGAGTTTCTTGGAATATTGTGGTTTGTGGGTGCCTTGATCAGGGTGATTTGGAACAAGGGTTGTGGTGGTTTAACAATGCTAGGGTTTATGCTGATGGGTTTCAGTTTCAACCCAATAATTCTACTTTGGTGCTTGTAATCCAAGCGTGTCGCCGCCTCCGGGATAAGTGTGAGGGGCTGATCGTACATGGTTATGTGATTCGAGGCGGGTTTTCCTTTGTATCTTCGGTTCAAAACTCTTTGTTGAGTCTGTATGCAGAGGAAGGTGATATGGACAGCGCGCGGAATGTGTTTGATGAAATGCGTCAGAGAGATGTTATCTCTTGGAGTGTGATGATTGGGGGCTTTGTACGTTGTGAGGAAGCTCTAATTGGGATGCAGATGTTCCGAAGGATGGTAGCCGAGCTTGGCATTGAACCGGATGGTGTTACAATGGTCAGTGTTCTTAAAGCATGCACTAATTTGAAGGACTTGACAATGGGACAGTCGATCCACGGGTTGGTAATCTGTAGAGGTTTAGATTGTGATATGTTCGTTGGAAACTCTTTGATTGATATGTATTCCAAGTGCAGTGATGCGGATTCTGCATCTAAAGTTTTCGAGGCAATGCCGCGAAGGAATAAGGTCTCGTGGAATTCTATTTTATCTGGATTTGTGTTCAACGAGAAGCATTTGGAGGCCCTGTCACTGTTTTTCTCTATGGGGAATGAAGGAATTGAGGCGGACGAAGTTACTCTTGTGAGTGTTCTTCAAACATCCGAACATTTGGGCTTGATTCATTGCAAGTCGGTGCACTGCGTAACAATCAGGCAGGGATACGAATCAAATGAATTGCTCCTGAATTCTCTCATGGATGCTTATGCAAAGTGCAACGATGTTGAGCTTGCATGGAAACTTTTTAGAGAGATGAAGAAAAGAGATGTGGTTTCGTGGAGCAACATGATTGGAGGGTTTGCTAGTTGTGGCAGACCCGATGAAGCAATTGCCGTATTCAACGAGATGATGAGGCTGCAGGGACAAGATCAGAAGCCCAATGAGATCACCATCATAAATCTTTTTGACGCTTGTTCAGCTTCTGCCGAATTGAAGAGGTCGAAATGGGCTCATGGAATTGCTATCAGAAGAGGTTTGGCAGCACAAGTAGCTGTCGGAACCGCAATTGTAGACATGTACTCGAAATGTGGGGCAATAGGAGAATCGAGAAAGGCTTTTGGACAAATTCTTGAAAAAAATGTCGTGTCATGGAGTGCCATGATAGCTGCGTATGGAATGAACGGTCTTGGCCATGAAGCACTAGCTTTACTTGCAGAAATGAAGCTGTATGGTTTGAAACCAAATGCAGTGACCATTCTTTCTGTGCTATCTGCGTGTAGCCATGGAGGTTTAGTCGAAGAGGGCCTTTCCTTGTTCAATTCGATGGTTCAAGATCACGGCATTGAACAAAGACCGGAACATTACACTTGTGTAGTTGACATGCTGGCCCGAGCAGGAAAGCTTGTAATGGCAATGGAATTTATCAAAAAAATCCCAGAAAGTTTTATGGCCGCCAGAACAAGTAATGCTTGGGGTGCATTATTGAGCGCTTGCAGAAGCTATAGGAACAGCAAAGTTGGTTTTGAAGCCGCCTCTCGTGTGCTTGAGCTGGAGCCTGAAAACTCAGCCGGGTACTTACTGGCGTCGAGCATTTATGCAGCGAACGGGTTGTGGGTCGACGCTGCAAGTATGAGAAGGTTGGTGAAGGAAAGAAGGGTGAGGGTTGTGGCTGGTTACAGCTTAGTGCATGTTGGTAACAAGGCATGTAGATTTGTTGCTGGTGATGGTAATTCCCACTCCAAATCCGTTTCACCATCTCATGGAAATATGCACTCAATGCTCGAGCTGTTGCATGCCTGCATGAACAAGACCGGAAACAGGAATATTGTTGATGATTTCGACTTAATTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE PPR PPR_2

Protein Analysis

759

Amino Acids

83.32

Weight (kDa)

6.85

Isoelectric Point (pI)

38.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	317 - 360	4.7e-06	PPR repeat family
PPR_2	PF13041	390 - 418	2.9e-07	PPR repeat family
PPR	PF01535	391 - 417	1.5e-06	PPR repeat
PPR_2	PF13041	416 - 466	4.4e-08	PPR repeat family
PPR	PF01535	419 - 446	4.9e-07	PPR repeat
PPR_2	PF13041	520 - 568	1.2e-09	PPR repeat family
PPR	PF01535	523 - 552	5.2e-06	PPR repeat
E_motif	PF20431	642 - 702	2.3e-08	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17210
fragaria_vesca	FvH4_2g09980 FvH4_2g09980
malus_domestica	MD05G1134800.v1.1 MD10G1139900.v1.1
prunus_persica	Prupe.8G178700_v2.0.a1
pyrus_communis	pycom10g11880
rosa_chinensis	RchiOBHm_Chr6g0266861
rosa_laevigata	RLG00000014068
rosa_multiflora	Rmu_sc0013959.1_g000001
rosa_roxburghii	Rroxscaffold_7G00201400
rosa_rugosa	Rorug06G0027700
rosa_samantha	Rh6AG148700 Rh6BG149800 Rh6CG144700 Rh6DG133900
rosa_wichuraiana	Rw6G012870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	360
AccB7I	CCANNNNNTGG	2 cut(s)	829, 2183
AccBSI	CCGCTC	1 cut(s)	177
AccI	GTMKAC	2 cut(s)	1494, 2040
AccII	CGCG	3 cut(s)	611, 613, 943
AclWI	GGATC	1 cut(s)	814
AcoI	YGGCCR	2 cut(s)	1612, 1872
AcsI	RAATTY	5 cut(s)	250, 964, 1171, 1548, 1841
AcuI	CTGAAG	1 cut(s)	120
AcyI	GRCGYC	1 cut(s)	2006
AfaI	GTAC	4 cut(s)	516, 681, 1502, 1997
AfeI	AGCGCT	1 cut(s)	1912
AfiI	CCNNNNNNNGG	6 cut(s)	370, 490, 724, 829, 2183, 2241
AflIII	ACRYGT	1 cut(s)	1497
AjuI	GAANNNNNNNTTGG	2 cut(s)	684, 716
AleI	CACNNNNGTG	1 cut(s)	242
Alw21I	GWGCWC	2 cut(s)	204, 1125
Alw26I	GTCTC	1 cut(s)	961
Alw44I	GTGCAC	2 cut(s)	200, 1121
AlwI	GGATC	1 cut(s)	814
AlwNI	CAGNNNCTG	1 cut(s)	1406
Ama87I	CYCGRG	2 cut(s)	1812, 2204
Aor51HI	AGCGCT	1 cut(s)	1912
AoxI	GGCC	5 cut(s)	1008, 1612, 1726, 1809, 1872
ApaLI	GTGCAC	2 cut(s)	200, 1121
ApeKI	GCWGC	5 cut(s)	1339, 1463, 1589, 2021, 2045
ApoI	RAATTY	5 cut(s)	250, 964, 1171, 1548, 1841
AspLEI	GCGC	4 cut(s)	6, 611, 613, 1913
AspS9I	GGNCC	3 cut(s)	1009, 1726, 1810
AsuC2I	CCSGG	2 cut(s)	491, 1993
AsuHPI	GGTGA	7 cut(s)	386, 608, 1363, 2077, 2092, 2156, 2166
AvaI	CYCGRG	2 cut(s)	1812, 2204
BaeGI	GKGCMC	2 cut(s)	204, 1125
BalI	TGGCCA	1 cut(s)	1614
BanI	GGYRCC	1 cut(s)	360
BanII	GRGCYC	1 cut(s)	1435
BauI	CACGAG	2 cut(s)	958, 1959
Bbv12I	GWGCWC	2 cut(s)	204, 1125
BbvI	GCAGC	5 cut(s)	1326, 1475, 1576, 2032, 2033
BccI	CCATC	8 cut(s)	323, 419, 718, 746, 1382, 1741, 2141, 2185
BceAI	ACGGC	2 cut(s)	1301, 1777
BciVI	GTATCC	1 cut(s)	1139
BclI	TGATCA	2 cut(s)	213, 367
BcnI	CCSGG	2 cut(s)	491, 1993
BcoDI	GTCTC	1 cut(s)	961
BfaI	CTAG	3 cut(s)	411, 1287, 1625
BfmI	CTRYAG	3 cut(s)	838, 1340, 1924
BfoI	RGCGCY	1 cut(s)	1914
BfuI	GTATCC	1 cut(s)	1139
BisI	GCNGC	9 cut(s)	484, 941, 1340, 1464, 1590, 1875, 1953, 2022, 2046
BlsI	GCNGC	9 cut(s)	485, 942, 1341, 1465, 1591, 1876, 1954, 2023, 2047
Bme1390I	CCNGG	2 cut(s)	491, 1993
BmeT110I	CYCGRG	2 cut(s)	1812, 2204
BmgT120I	GGNCC	3 cut(s)	1009, 1726, 1810
BmiI	GGNNCC	3 cut(s)	362, 1483, 1977
BmrFI	CCNGG	2 cut(s)	491, 1993
BmsI	GCATC	4 cut(s)	696, 895, 926, 1174
BpmI	CTGGAG	1 cut(s)	1994
BpuEI	CTTGAG	1 cut(s)	1988
BpuMI	CCSGG	2 cut(s)	491, 1993
BsaBI	GATNNNNATC	2 cut(s)	1150, 1373
BsaHI	GRCGYC	1 cut(s)	2006
BsaI	GGTCTC	1 cut(s)	961
BsaJI	CCNNGG	4 cut(s)	243, 258, 823, 1705
BsaWI	WCCGGW	3 cut(s)	748, 1777, 2234
BsaXI	ACNNNNNCTCC	4 cut(s)	998, 1028, 1701, 1731
Bsc4I	CCNNNNNNNGG	6 cut(s)	370, 490, 724, 829, 2183, 2241
Bse1I	ACTGG	2 cut(s)	226, 2007
Bse3DI	GCAATG	4 cut(s)	43, 942, 1108, 1842
Bse8I	GATNNNNATC	2 cut(s)	1150, 1373
BseDI	CCNNGG	4 cut(s)	243, 258, 823, 1705
BseGI	GGATG	5 cut(s)	711, 729, 757, 1085, 1189
BseJI	GATNNNNATC	2 cut(s)	1150, 1373
BseLI	CCNNNNNNNGG	6 cut(s)	370, 490, 724, 829, 2183, 2241
BseMI	GCAATG	4 cut(s)	43, 942, 1108, 1842
BseMII	CTCAG	1 cut(s)	2001
BseNI	ACTGG	2 cut(s)	226, 2007
BsePI	GCGCGC	1 cut(s)	609
BseRI	GAGGAG	2 cut(s)	169, 334
BseSI	GKGCMC	2 cut(s)	204, 1125
BseXI	GCAGC	5 cut(s)	1326, 1475, 1576, 2032, 2033
BsgI	GTGCAG	2 cut(s)	220, 919
Bsh1236I	CGCG	3 cut(s)	611, 613, 943
BshFI	GGCC	5 cut(s)	1010, 1614, 1728, 1811, 1874
BshNI	GGYRCC	1 cut(s)	360
BsiHKAI	GWGCWC	2 cut(s)	204, 1125
BsiHKCI	CYCGRG	2 cut(s)	1812, 2204
BsiSI	CCGG	5 cut(s)	490, 749, 1778, 1992, 2235
BslFI	GGGAC	2 cut(s)	825, 1359
BslI	CCNNNNNNNGG	6 cut(s)	370, 490, 724, 829, 2183, 2241
BsmAI	GTCTC	1 cut(s)	961
BsmFI	GGGAC	2 cut(s)	825, 1359
BsnI	GGCC	5 cut(s)	1010, 1614, 1728, 1811, 1874
Bso31I	GGTCTC	1 cut(s)	961
BsoBI	CYCGRG	2 cut(s)	1812, 2204
Bsp1286I	GDGCHC	3 cut(s)	204, 1125, 1435
Bsp143I	GATC	7 cut(s)	213, 367, 510, 819, 1351, 1368, 1756
Bsp19I	CCATGG	2 cut(s)	258, 1705
BspANI	GGCC	5 cut(s)	1010, 1614, 1728, 1811, 1874
BspCNI	CTCAG	1 cut(s)	2000
BspFNI	CGCG	3 cut(s)	611, 613, 943
BspLI	GGNNCC	3 cut(s)	362, 1483, 1977
BspMAI	CTGCAG	1 cut(s)	1344
BspPI	GGATC	1 cut(s)	814
BspT107I	GGYRCC	1 cut(s)	360
BspTNI	GGTCTC	1 cut(s)	961
BsrBI	CCGCTC	1 cut(s)	177
BsrDI	GCAATG	4 cut(s)	43, 942, 1108, 1842
BsrI	ACTGG	2 cut(s)	226, 2007
BssECI	CCNNGG	4 cut(s)	243, 258, 823, 1705
BssHII	GCGCGC	1 cut(s)	609
BssMI	GATC	7 cut(s)	213, 367, 510, 819, 1351, 1368, 1756
BssNI	GRCGYC	1 cut(s)	2006
BssSI	CACGAG	2 cut(s)	958, 1959
BssT1I	CCWWGG	2 cut(s)	258, 1705
Bst2BI	CACGAG	2 cut(s)	958, 1959
Bst4CI	ACNGT	3 cut(s)	816, 1020, 1607
Bst6I	CTCTTC	3 cut(s)	1412, 1447, 1716
BstACI	GRCGYC	1 cut(s)	2006
BstAPI	GCANNNNNTGC	1 cut(s)	2200
BstC8I	GCNNGC	8 cut(s)	163, 611, 784, 1215, 1809, 1915, 2217, 2221
BstDEI	CTNAG	2 cut(s)	1987, 2104
BstDSI	CCRYGG	4 cut(s)	243, 258, 823, 1705
BstENI	CCTNNNNNAGG	1 cut(s)	368
BstF5I	GGATG	5 cut(s)	711, 729, 757, 1085, 1189
BstFNI	CGCG	3 cut(s)	611, 613, 943
BstH2I	RGCGCY	1 cut(s)	1914
BstHHI	GCGC	4 cut(s)	6, 611, 613, 1913
BstKTI	GATC	7 cut(s)	216, 370, 513, 822, 1354, 1371, 1759
BstMAI	GTCTC	1 cut(s)	961
BstMBI	GATC	7 cut(s)	213, 367, 510, 819, 1351, 1368, 1756
BstNSI	RCATGY	7 cut(s)	165, 786, 1501, 1807, 2114, 2130, 2219
BstSCI	CCNGG	2 cut(s)	489, 1991
BstSFI	CTRYAG	3 cut(s)	838, 1340, 1924
BstSLI	GKGCMC	2 cut(s)	204, 1125
BstUI	CGCG	3 cut(s)	611, 613, 943
BstV1I	GCAGC	5 cut(s)	1326, 1475, 1576, 2032, 2033
BstXI	CCANNNNNNTGG	1 cut(s)	113
BsuI	GTATCC	1 cut(s)	1139
BsuRI	GGCC	5 cut(s)	1010, 1614, 1728, 1811, 1874
BtgI	CCRYGG	4 cut(s)	243, 258, 823, 1705
BtsCI	GGATG	5 cut(s)	711, 729, 757, 1085, 1189
BtsI	GCAGTG	3 cut(s)	907, 1123, 1677
BtsIMutI	CAGTG	5 cut(s)	775, 907, 1016, 1123, 1677
Cac8I	GCNNGC	8 cut(s)	163, 611, 784, 1215, 1809, 1915, 2217, 2221
CaiI	CAGNNNCTG	1 cut(s)	1406
CfoI	GCGC	4 cut(s)	6, 611, 613, 1913
Cfr13I	GGNCC	3 cut(s)	1009, 1726, 1810
CseI	GACGC	4 cut(s)	623, 1400, 1995, 2051
Csp6I	GTAC	4 cut(s)	515, 680, 1501, 1996
CspCI	CAANNNNNGTGG	2 cut(s)	374, 409
CviQI	GTAC	4 cut(s)	515, 680, 1501, 1996
DdeI	CTNAG	2 cut(s)	1987, 2104
DpnI	GATC	7 cut(s)	215, 369, 512, 821, 1353, 1370, 1758
DpnII	GATC	7 cut(s)	213, 367, 510, 819, 1351, 1368, 1756
EaeI	YGGCCR	2 cut(s)	1612, 1872
Eam1104I	CTCTTC	3 cut(s)	1412, 1447, 1716
EarI	CTCTTC	3 cut(s)	1412, 1447, 1716
EciI	GGCGGA	3 cut(s)	172, 244, 1067
Eco130I	CCWWGG	2 cut(s)	258, 1705
Eco24I	GRGCYC	1 cut(s)	1435
Eco31I	GGTCTC	1 cut(s)	961
Eco47III	AGCGCT	1 cut(s)	1912
Eco57I	CTGAAG	1 cut(s)	120
Eco88I	CYCGRG	2 cut(s)	1812, 2204
EcoNI	CCTNNNNNAGG	1 cut(s)	368
EcoO109I	RGGNCCY	2 cut(s)	1009, 1726
EcoRI	GAATTC	3 cut(s)	250, 964, 1171
EcoT14I	CCWWGG	2 cut(s)	258, 1705
EcoT38I	GRGCYC	1 cut(s)	1435
ErhI	CCWWGG	2 cut(s)	258, 1705
FalI	AAGNNNNNCTT	8 cut(s)	69, 101, 1050, 1082, 1713, 1745, 1876, 1908
FaqI	GGGAC	2 cut(s)	825, 1359
FauI	CCCGC	1 cut(s)	530
FbaI	TGATCA	2 cut(s)	213, 367
FblI	GTMKAC	2 cut(s)	1494, 2040
Fnu4HI	GCNGC	9 cut(s)	484, 941, 1340, 1464, 1590, 1875, 1953, 2022, 2046
FokI	GGATG	5 cut(s)	718, 736, 764, 1072, 1196
FriOI	GRGCYC	1 cut(s)	1435
Fsp4HI	GCNGC	9 cut(s)	484, 941, 1340, 1464, 1590, 1875, 1953, 2022, 2046
FspBI	CTAG	3 cut(s)	411, 1287, 1625
GlaI	GCGC	4 cut(s)	5, 610, 612, 1912
GluI	GCNGC	9 cut(s)	484, 941, 1340, 1464, 1590, 1875, 1953, 2022, 2046
GsuI	CTGGAG	1 cut(s)	1994
HaeII	RGCGCY	1 cut(s)	1914
HaeIII	GGCC	5 cut(s)	1010, 1614, 1728, 1811, 1874
HapII	CCGG	5 cut(s)	490, 749, 1778, 1992, 2235
HgaI	GACGC	4 cut(s)	623, 1400, 1995, 2051
HhaI	GCGC	4 cut(s)	6, 611, 613, 1913
Hin1I	GRCGYC	1 cut(s)	2006
Hin6I	GCGC	4 cut(s)	4, 609, 611, 1911
HinP1I	GCGC	4 cut(s)	4, 609, 611, 1911
HincII	GTYRAC	2 cut(s)	1801, 2041
HindII	GTYRAC	2 cut(s)	1801, 2041
HindIII	AAGCTT	1 cut(s)	1823
HinfI	GANTC	9 cut(s)	16, 225, 230, 529, 577, 911, 1105, 1151, 1526
HpaII	CCGG	5 cut(s)	490, 749, 1778, 1992, 2235
HphI	GGTGA	7 cut(s)	386, 608, 1363, 2077, 2092, 2156, 2166
Hpy166II	GTNNAC	5 cut(s)	202, 1123, 1495, 1801, 2041
Hpy188I	TCNGA	6 cut(s)	639, 719, 1090, 1356, 1451, 1481
Hpy188III	TCNNGA	8 cut(s)	106, 114, 217, 978, 1168, 1530, 1553, 1754
Hpy8I	GTNNAC	5 cut(s)	202, 1123, 1495, 1801, 2041
Hpy99I	CGWCG	2 cut(s)	2011, 2045
HpyCH4III	ACNGT	3 cut(s)	816, 1020, 1607
HpyCH4IV	ACGT	2 cut(s)	270, 682
HpyF3I	CTNAG	2 cut(s)	1987, 2104
HpySE526I	ACGT	2 cut(s)	270, 682
Hsp92I	GRCGYC	1 cut(s)	2006
HspAI	GCGC	4 cut(s)	4, 609, 611, 1911
Ksp22I	TGATCA	2 cut(s)	213, 367
Kzo9I	GATC	7 cut(s)	213, 367, 510, 819, 1351, 1368, 1756
LmnI	GCTCC	5 cut(s)	182, 321, 1170, 1263, 1975
Lsp1109I	GCAGC	5 cut(s)	1326, 1475, 1576, 2032, 2033
LweI	GCATC	4 cut(s)	696, 895, 926, 1174
MaeI	CTAG	3 cut(s)	411, 1287, 1625
MaeII	ACGT	2 cut(s)	270, 682
MaeIII	GTNAC	7 cut(s)	757, 1014, 1060, 1129, 1672, 2096, 2117
MalI	GATC	7 cut(s)	215, 369, 512, 821, 1353, 1370, 1758
MbiI	CCGCTC	1 cut(s)	177
MboI	GATC	7 cut(s)	213, 367, 510, 819, 1351, 1368, 1756
MboII	GAAGA	6 cut(s)	546, 1070, 1252, 1429, 1464, 1733
MfeI	CAATTG	3 cut(s)	31, 1311, 1488
MhlI	GDGCHC	3 cut(s)	204, 1125, 1435
MlsI	TGGCCA	1 cut(s)	1614
MluNI	TGGCCA	1 cut(s)	1614
MlyI	GAGTC	2 cut(s)	239, 586
MmeI	TCCRAC	2 cut(s)	847, 1459
Mox20I	TGGCCA	1 cut(s)	1614
MscI	TGGCCA	1 cut(s)	1614
MseI	TTAA	6 cut(s)	120, 273, 309, 402, 777, 2267
MslI	CAYNNNNRTG	3 cut(s)	96, 242, 522
Msp20I	TGGCCA	1 cut(s)	1614
MspI	CCGG	5 cut(s)	490, 749, 1778, 1992, 2235
MspR9I	CCNGG	2 cut(s)	491, 1993
MunI	CAATTG	3 cut(s)	31, 1311, 1488
MvnI	CGCG	3 cut(s)	611, 613, 943
NciI	CCSGG	2 cut(s)	491, 1993
NcoI	CCATGG	2 cut(s)	258, 1705
NdeII	GATC	7 cut(s)	213, 367, 510, 819, 1351, 1368, 1756
NlaIV	GGNNCC	3 cut(s)	362, 1483, 1977
NmeAIII	GCCGAG	1 cut(s)	757
NmuCI	GTSAC	2 cut(s)	1014, 1672
NspI	RCATGY	7 cut(s)	165, 786, 1501, 1807, 2114, 2130, 2219
OliI	CACNNNNGTG	1 cut(s)	242
PaeI	GCATGC	3 cut(s)	165, 786, 2219
PaeR7I	CTCGAG	1 cut(s)	2204
PauI	GCGCGC	1 cut(s)	609
PciI	ACATGT	1 cut(s)	1497
PfeI	GAWTC	7 cut(s)	16, 225, 529, 911, 1105, 1151, 1526
PflMI	CCANNNNNTGG	2 cut(s)	829, 2183
PfoI	TCCNGGA	1 cut(s)	489
PkrI	GCNGC	9 cut(s)	485, 942, 1341, 1465, 1591, 1876, 1954, 2023, 2047
PleI	GAGTC	2 cut(s)	238, 585
PpsI	GAGTC	2 cut(s)	238, 585
PscI	ACATGT	1 cut(s)	1497
PspN4I	GGNNCC	3 cut(s)	362, 1483, 1977
PspPI	GGNCC	3 cut(s)	1009, 1726, 1810
PspXI	VCTCGAGB	1 cut(s)	2204
PsrI	GAACNNNNNNTAC	2 cut(s)	543, 575
PstI	CTGCAG	1 cut(s)	1344
PstNI	CAGNNNCTG	1 cut(s)	1406
PteI	GCGCGC	1 cut(s)	609
RsaI	GTAC	4 cut(s)	516, 681, 1502, 1997
RsaNI	GTAC	4 cut(s)	515, 680, 1501, 1996
RseI	CAYNNNNRTG	3 cut(s)	96, 242, 522
SalI	GTCGAC	1 cut(s)	2039
SaqAI	TTAA	6 cut(s)	120, 273, 309, 402, 777, 2267
SatI	GCNGC	9 cut(s)	484, 941, 1340, 1464, 1590, 1875, 1953, 2022, 2046
Sau3AI	GATC	7 cut(s)	213, 367, 510, 819, 1351, 1368, 1756
Sau96I	GGNCC	3 cut(s)	1009, 1726, 1810
SchI	GAGTC	2 cut(s)	239, 586
ScrFI	CCNGG	2 cut(s)	491, 1993
SduI	GDGCHC	3 cut(s)	204, 1125, 1435
SfaNI	GCATC	4 cut(s)	696, 895, 926, 1174
SfcI	CTRYAG	3 cut(s)	838, 1340, 1924
Sfr274I	CTCGAG	1 cut(s)	2204
SlaI	CTCGAG	1 cut(s)	2204
SmiMI	CAYNNNNRTG	3 cut(s)	96, 242, 522
SmlI	CTYRAG	2 cut(s)	1967, 2204
SmoI	CTYRAG	2 cut(s)	1967, 2204
SphI	GCATGC	3 cut(s)	165, 786, 2219
SspI	AATATT	2 cut(s)	346, 2248
SspMI	CTAG	3 cut(s)	411, 1287, 1625
StyD4I	CCNGG	2 cut(s)	489, 1991
StyI	CCWWGG	2 cut(s)	258, 1705
TaaI	ACNGT	3 cut(s)	816, 1020, 1607
TaiI	ACGT	2 cut(s)	273, 685
TatI	WGTACW	1 cut(s)	1500
TauI	GCSGC	4 cut(s)	486, 943, 1877, 1955
TfiI	GAWTC	7 cut(s)	16, 225, 529, 911, 1105, 1151, 1526
Tru1I	TTAA	6 cut(s)	120, 273, 309, 402, 777, 2267
Tru9I	TTAA	6 cut(s)	120, 273, 309, 402, 777, 2267
TscAI	CASTG	5 cut(s)	775, 907, 1023, 1130, 1677
TseFI	GTSAC	2 cut(s)	1014, 1672
TseI	GCWGC	5 cut(s)	1339, 1463, 1589, 2021, 2045
Tsp45I	GTSAC	2 cut(s)	1014, 1672
TspGWI	ACGGA	3 cut(s)	219, 232, 2158
TspRI	CASTG	5 cut(s)	775, 907, 1023, 1130, 1677
Van91I	CCANNNNNTGG	2 cut(s)	829, 2183
VneI	GTGCAC	2 cut(s)	200, 1121
XagI	CCTNNNNNAGG	1 cut(s)	368
XapI	RAATTY	5 cut(s)	250, 964, 1171, 1548, 1841
XceI	RCATGY	7 cut(s)	165, 786, 1501, 1807, 2114, 2130, 2219
XhoI	CTCGAG	1 cut(s)	2204
XmiI	GTMKAC	2 cut(s)	1494, 2040
XspI	CTAG	3 cut(s)	411, 1287, 1625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.