Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0014273

Physical Location & Seq

Genomic Coordinates Reverse (-)

46343159 .. 46345420

Gene Structure 2262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014068

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGCGCGTTCCAAGCAGTACCAACCTCTGTAATTGGCATTTGAAGCTCAAAGAGCTATCATCCAATGGAAAATGGGTAGAATTACTCTGCCACTACCATCAAGTCAACAAAGCTGGACTTCACCTAACACACTTTTCAGTCTTCCCTCCAATTCTCAAAGCATGTTCAAACCTCCTTTCCTACTCCAATGGAAACTCTATACATGGGTGTTTGATCAAAACTGGGTGTGATTCATACACTTCCATTGGTAACTCCACCATGGACTTCTACATCAAAACCGGGGACCCAGATTCTGCATTGGGTGTTTTTAACTCTATGAGGTGGAGAGATCAAGTTTCTTGGAATATTATGGTTTATGGGAGCCTTGATCTGGGGAATTTAGAACAAGGGTTATGGTGGTTTAACAAGGCCAGGGTTTCGGTTTGTGGGTTTCAACCCAATACTTCTACTCTGGTGCTTGTTATTCAAGCCTGTCGTCGGCTTAGAGATAAATATGAAGGACTGAAAGTACATGGTTACGTGATTCAAGGCGGGTTTTGTTATATATCTTCCGTTCAGAACTCATTGTTGAGTCTATATGCAGAAGATGATGACATGGAGAGTGCACACAAGCTGTTCGACGAAATGTCTGAGAGAGATGTCATCTCTTGGAGTGTGATGATAGGAGGTTATGTGCATTGCGAGGAAGCTCAAAACGGCATGAAGATGTTCCGAAAGATGGTATGTGAGCTTGGTATTGAACCAGATGGCGTAACTGCGGTCAGTGTTCTTAAAGGGTGCACTAGTTTGAGGGACTTGACGATGGGAACATCGCTCCATGGGTTGGTAATCTATAGAGGGTTAGATTCTGATCTGTTTGTTGGAAACTCTTTAATTGATATGTATGCCAAGTGTAATGATGCGGATTCTGCCTTTAAAGTTTTTAAGGAGTTGCCGCAAAGAAATAGGGTTTCATGGAATTCTATGTTGTCTGCATTTGTCCATAATGAGAGGTACATGGATGCCCTGTCACTGTTTTATTCTATGGGGAAGGAAGGTATAAACGCAGATGAAGTGACTCTGGTGAATATTCTTCAAATATGCAAGCATTTGCGCCTAGTTGATTGCAAGTTGGTGCACTGTGTAACAATCAGGTGGGGGTTTGAATCAAATGAGTTGCTCCTAAATTCGCTCATTGATGCTTATGCAAAGTGCAATTGTATCGAGCTTGCATGGAAACTTTTTGATAGGATGACGAAAAGAGATGTGGTTTCGTGGAGCACTATGATTGCAGGGTTTACACATTGTGGCAGACCTGATCAAGCAATTGCCGTCTTCTGTGAGATGACAAGGCTGCAGGCGCAGGATGATCAGAAGCCCAATGAGATTACACTCATAAATCTTTTTGAAGCTTGTTCAGTTTCAGTCGAATTGAAATGGGCCAAAGGGGCACATGGAATTGCTATTCGAAGAGGTGTGTCAACTGCAGATCAAGTAGCTGTCGGAACTGCAACTGTTGACATGTACTCGAAATGCGGGGCAATAGGAGAATCAAGAAAAGTTTTTGACCAGATTTCTGAAAAAAACGTTGTGTCATGGAGTGCCATGATAGCTGCATATGGCATGAACGGTCTTGCACATGAAGCTCTAGCTTTGGTTGAGGAAATGAAGCTGTATGGTGCAAATCCAAATGCAGTGACCACTCTTTCTGTGCTATCTGCCTGCAGCCATGGAGGCTTAGTTCAAGAAGGTCTCTCCTTGTTCAACTCACTTGCTCAGGTTTATGGAGTTGAACCAAGATTGGAACATTATGCGTGTGTAGTTGACATGTTGGGACGAGCAGGAAAGCTCCATATGGCTATGGATTTTATCAAGAACATTCCAGAAGGTTTAAAGGTCGCTGGGGAAAATGCTGCTTGGAGTGCACTATTGAGTGCTTGTAGAAGCTATGGCAATAGTGACGTTGGTGCAGTTGCTGCTTCTCATGTCCTTGAGTTAGAGCCTGAAAGTTCAACTGGGTATTTACTTGCCTCAAGTATTTATGCAGCAGGTGGGTTGTGGGTTGATGCTGCAAGTATTAGAAGAATGGTGAAAGAAAAAAGGGTGACGGTTGTTGCTGGTTATAGCTTAGTTTATGTTGATAACAAGGCATGTAGATTTGTTGCTGGGGATATTGATTGCCATTCACTAGCTGCTGGAGAGATGCACTCTATAGTTGAGCTGTTGCATGCTTGTATGAAGACTGAAAAGAGGAATGCTGGTAATTTTGATATAATTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE PPR PPR_2

Protein Analysis

754

Amino Acids

83.07

Weight (kDa)

6.1

Isoelectric Point (pI)

34.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	212 - 260	6.7e-06	PPR repeat family
PPR_2	PF13041	315 - 356	7.1e-07	PPR repeat family
PPR	PF01535	317 - 347	7e-06	PPR repeat
PPR_2	PF13041	414 - 465	1.2e-06	PPR repeat family
PPR	PF01535	417 - 444	9.1e-06	PPR repeat
PPR_2	PF13041	521 - 569	1.3e-08	PPR repeat family
PPR	PF01535	524 - 553	5.2e-06	PPR repeat
E_motif	PF20431	643 - 700	3.8e-07	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17210
fragaria_vesca	FvH4_2g09980 FvH4_2g09980
malus_domestica	MD05G1134800.v1.1 MD10G1139900.v1.1
prunus_persica	Prupe.8G178700_v2.0.a1
pyrus_communis	pycom10g11880
rosa_chinensis	RchiOBHm_Chr6g0266861
rosa_laevigata	RLG00000014068
rosa_multiflora	Rmu_sc0013959.1_g000001
rosa_roxburghii	Rroxscaffold_7G00201400
rosa_rugosa	Rorug06G0027700
rosa_samantha	Rh6AG148700 Rh6BG149800 Rh6CG144700 Rh6DG133900
rosa_wichuraiana	Rw6G012870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2018
Acc36I	ACCTGC	1 cut(s)	2018
AccB7I	CCANNNNNTGG	1 cut(s)	823
AccII	CGCG	1 cut(s)	6
AciI	CCGC	5 cut(s)	531, 758, 902, 935, 1515
AclI	AACGTT	1 cut(s)	1566
AcsI	RAATTY	3 cut(s)	376, 958, 1165
AdeI	CACNNNGTG	1 cut(s)	1286
AfaI	GTAC	4 cut(s)	19, 510, 995, 1505
AfiI	CCNNNNNNNGG	4 cut(s)	370, 477, 718, 823
AflIII	ACRYGT	2 cut(s)	1500, 1806
AhdI	GACNNNNNGTC	1 cut(s)	625
AhlI	ACTAGT	1 cut(s)	782
AjnI	CCWGG	1 cut(s)	410
AloI	GAACNNNNNNTCC	2 cut(s)	1704, 1736
Alw21I	GWGCWC	5 cut(s)	607, 782, 1119, 1262, 1906
Alw26I	GTCTC	1 cut(s)	1736
Alw44I	GTGCAC	4 cut(s)	603, 778, 1115, 1902
AlwNI	CAGNNNCTG	2 cut(s)	293, 1955
AoxI	GGCC	2 cut(s)	408, 1419
ApaLI	GTGCAC	4 cut(s)	603, 778, 1115, 1902
ApeKI	GCWGC	8 cut(s)	1333, 1592, 1704, 1892, 1955, 2024, 2048, 2171
ApoI	RAATTY	3 cut(s)	376, 958, 1165
Asp700I	GAANNNNTTC	1 cut(s)	707
AspLEI	GCGC	3 cut(s)	6, 1095, 1342
AspS9I	GGNCC	2 cut(s)	283, 1419
AsuC2I	CCSGG	1 cut(s)	280
AsuHPI	GGTGA	4 cut(s)	113, 1075, 2080, 2095
AsuII	TTCGAA	1 cut(s)	1447
AvaII	GGWCC	1 cut(s)	283
BaeGI	GKGCMC	5 cut(s)	607, 782, 1119, 1432, 1906
BbsI	GAAGAC	3 cut(s)	133, 1306, 2225
Bbv12I	GWGCWC	5 cut(s)	607, 782, 1119, 1262, 1906
BbvI	GCAGC	8 cut(s)	1320, 1579, 1716, 1879, 1942, 2035, 2036, 2158
BccI	CCATC	4 cut(s)	105, 712, 740, 796
BceAI	ACGGC	2 cut(s)	712, 1295
BcgI	CGANNNNNNTGC	2 cut(s)	1183, 1217
BciT130I	CCWGG	1 cut(s)	412
BclI	TGATCA	3 cut(s)	213, 1297, 1348
BcnI	CCSGG	1 cut(s)	280
BcoDI	GTCTC	1 cut(s)	1736
BcuI	ACTAGT	1 cut(s)	782
BfaI	CTAG	4 cut(s)	783, 1097, 1628, 2168
BfmI	CTRYAG	5 cut(s)	832, 1334, 1464, 1702, 2190
BfuAI	ACCTGC	1 cut(s)	2018
BglI	GCCNNNNNGGC	2 cut(s)	1427, 1713
BisI	GCNGC	9 cut(s)	935, 1334, 1593, 1705, 1893, 1956, 2025, 2049, 2172
BlsI	GCNGC	9 cut(s)	936, 1335, 1594, 1706, 1894, 1957, 2026, 2050, 2173
Bme1390I	CCNGG	2 cut(s)	280, 412
Bme18I	GGWCC	1 cut(s)	283
BmeRI	GACNNNNNGTC	1 cut(s)	625
BmgT120I	GGNCC	2 cut(s)	283, 1419
BmiI	GGNNCC	3 cut(s)	284, 285, 362
BmrFI	CCNGG	2 cut(s)	280, 412
BmrI	ACTGGG	2 cut(s)	231, 2004
BmsI	GCATC	5 cut(s)	889, 991, 1168, 2035, 2172
BmuI	ACTGGG	2 cut(s)	231, 2004
BpiI	GAAGAC	3 cut(s)	133, 1306, 2225
BplI	GAGNNNNNCTC	2 cut(s)	2171, 2203
BpmI	CTGGAG	1 cut(s)	2196
Bpu10I	CCTNAGC	1 cut(s)	1755
Bpu14I	TTCGAA	1 cut(s)	1447
BpuEI	CTTGAG	2 cut(s)	1991, 1996
BpuMI	CCSGG	1 cut(s)	280
BsaAI	YACGTR	1 cut(s)	520
BsaBI	GATNNNNATC	1 cut(s)	849
BsaI	GGTCTC	1 cut(s)	1736
BsaJI	CCNNGG	5 cut(s)	258, 279, 411, 817, 1708
BsaXI	ACNNNNNCTCC	4 cut(s)	657, 687, 1704, 1734
Bsc4I	CCNNNNNNNGG	4 cut(s)	370, 477, 718, 823
Bse1I	ACTGG	2 cut(s)	226, 1999
Bse3DI	GCAATG	1 cut(s)	676
Bse8I	GATNNNNATC	1 cut(s)	849
BseBI	CCWGG	1 cut(s)	412
BseDI	CCNNGG	5 cut(s)	258, 279, 411, 817, 1708
BseGI	GGATG	4 cut(s)	59, 1006, 1236, 1351
BseJI	GATNNNNATC	1 cut(s)	849
BseLI	CCNNNNNNNGG	4 cut(s)	370, 477, 718, 823
BseMI	GCAATG	1 cut(s)	676
BseMII	CTCAG	2 cut(s)	621, 1769
BseNI	ACTGG	2 cut(s)	226, 1999
BseSI	GKGCMC	5 cut(s)	607, 782, 1119, 1432, 1906
BseXI	GCAGC	8 cut(s)	1320, 1579, 1716, 1879, 1942, 2035, 2036, 2158
BseYI	CCCAGC	2 cut(s)	1880, 2144
BsgI	GTGCAG	1 cut(s)	1968
Bsh1236I	CGCG	1 cut(s)	6
BshFI	GGCC	2 cut(s)	410, 1421
BsiHKAI	GWGCWC	5 cut(s)	607, 782, 1119, 1262, 1906
BsiSI	CCGG	1 cut(s)	279
BslFI	GGGAC	3 cut(s)	296, 806, 1827
BslI	CCNNNNNNNGG	4 cut(s)	370, 477, 718, 823
BsmAI	GTCTC	1 cut(s)	1736
BsmFI	GGGAC	3 cut(s)	296, 806, 1827
BsmI	GAATGC	1 cut(s)	2239
BsnI	GGCC	2 cut(s)	410, 1421
Bso31I	GGTCTC	1 cut(s)	1736
Bsp119I	TTCGAA	1 cut(s)	1447
Bsp1286I	GDGCHC	6 cut(s)	607, 782, 1119, 1262, 1432, 1906
Bsp143I	GATC	7 cut(s)	213, 328, 367, 850, 1297, 1348, 1468
Bsp19I	CCATGG	3 cut(s)	258, 817, 1708
BspACI	CCGC	5 cut(s)	531, 758, 902, 935, 1515
BspANI	GGCC	2 cut(s)	410, 1421
BspCNI	CTCAG	2 cut(s)	622, 1768
BspFNI	CGCG	1 cut(s)	6
BspLI	GGNNCC	3 cut(s)	284, 285, 362
BspMAI	CTGCAG	3 cut(s)	1338, 1468, 1706
BspMI	ACCTGC	1 cut(s)	2018
BspT104I	TTCGAA	1 cut(s)	1447
BspTNI	GGTCTC	1 cut(s)	1736
BsrDI	GCAATG	1 cut(s)	676
BsrI	ACTGG	2 cut(s)	226, 1999
BssECI	CCNNGG	5 cut(s)	258, 279, 411, 817, 1708
BssMI	GATC	7 cut(s)	213, 328, 367, 850, 1297, 1348, 1468
BssT1I	CCWWGG	3 cut(s)	258, 817, 1708
Bst2UI	CCWGG	1 cut(s)	412
Bst4CI	ACNGT	5 cut(s)	1014, 1121, 1495, 1610, 2089
Bst6I	CTCTTC	1 cut(s)	1444
BstAPI	GCANNNNNTGC	1 cut(s)	1955
BstBAI	YACGTR	1 cut(s)	520
BstBI	TTCGAA	1 cut(s)	1447
BstC8I	GCNNGC	5 cut(s)	1085, 1209, 1338, 1702, 2208
BstDEI	CTNAG	5 cut(s)	482, 630, 1717, 1755, 2107
BstDSI	CCRYGG	3 cut(s)	258, 817, 1708
BstF5I	GGATG	4 cut(s)	59, 1006, 1236, 1351
BstFNI	CGCG	1 cut(s)	6
BstHHI	GCGC	3 cut(s)	6, 1095, 1342
BstKTI	GATC	7 cut(s)	216, 331, 370, 853, 1300, 1351, 1471
BstMAI	GTCTC	1 cut(s)	1736
BstMBI	GATC	7 cut(s)	213, 328, 367, 850, 1297, 1348, 1468
BstNI	CCWGG	1 cut(s)	412
BstNSI	RCATGY	5 cut(s)	165, 1504, 1810, 2133, 2210
BstSCI	CCNGG	2 cut(s)	278, 410
BstSFI	CTRYAG	5 cut(s)	832, 1334, 1464, 1702, 2190
BstSLI	GKGCMC	5 cut(s)	607, 782, 1119, 1432, 1906
BstUI	CGCG	1 cut(s)	6
BstV1I	GCAGC	8 cut(s)	1320, 1579, 1716, 1879, 1942, 2035, 2036, 2158
BstV2I	GAAGAC	3 cut(s)	133, 1306, 2225
BsuRI	GGCC	2 cut(s)	410, 1421
BtgI	CCRYGG	3 cut(s)	258, 817, 1708
BtgZI	GCGATG	1 cut(s)	795
BtsCI	GGATG	4 cut(s)	59, 1006, 1236, 1351
BtsI	GCAGTG	1 cut(s)	1680
BtsIMutI	CAGTG	4 cut(s)	769, 1010, 1117, 1680
BveI	ACCTGC	1 cut(s)	2018
Cac8I	GCNNGC	5 cut(s)	1085, 1209, 1338, 1702, 2208
CaiI	CAGNNNCTG	2 cut(s)	293, 1955
CfoI	GCGC	3 cut(s)	6, 1095, 1342
Cfr13I	GGNCC	2 cut(s)	283, 1419
Csp6I	GTAC	4 cut(s)	18, 509, 994, 1504
CviQI	GTAC	4 cut(s)	18, 509, 994, 1504
DdeI	CTNAG	5 cut(s)	482, 630, 1717, 1755, 2107
DpnI	GATC	7 cut(s)	215, 330, 369, 852, 1299, 1350, 1470
DpnII	GATC	7 cut(s)	213, 328, 367, 850, 1297, 1348, 1468
DraI	TTTAAA	2 cut(s)	916, 1872
DraIII	CACNNNGTG	1 cut(s)	1286
DriI	GACNNNNNGTC	1 cut(s)	625
Eam1104I	CTCTTC	1 cut(s)	1444
Eam1105I	GACNNNNNGTC	1 cut(s)	625
EarI	CTCTTC	1 cut(s)	1444
Eco130I	CCWWGG	3 cut(s)	258, 817, 1708
Eco31I	GGTCTC	1 cut(s)	1736
Eco47I	GGWCC	1 cut(s)	283
EcoO109I	RGGNCCY	1 cut(s)	283
EcoRI	GAATTC	1 cut(s)	958
EcoRII	CCWGG	1 cut(s)	410
EcoT14I	CCWWGG	3 cut(s)	258, 817, 1708
ErhI	CCWWGG	3 cut(s)	258, 817, 1708
FalI	AAGNNNNNCTT	2 cut(s)	102, 134
FaqI	GGGAC	3 cut(s)	296, 806, 1827
FauI	CCCGC	2 cut(s)	524, 1508
FauNDI	CATATG	2 cut(s)	1597, 1833
FbaI	TGATCA	3 cut(s)	213, 1297, 1348
Fnu4HI	GCNGC	9 cut(s)	935, 1334, 1593, 1705, 1893, 1956, 2025, 2049, 2172
FokI	GGATG	4 cut(s)	46, 1013, 1243, 1358
Fsp4HI	GCNGC	9 cut(s)	935, 1334, 1593, 1705, 1893, 1956, 2025, 2049, 2172
FspBI	CTAG	4 cut(s)	783, 1097, 1628, 2168
GlaI	GCGC	3 cut(s)	5, 1094, 1341
GluI	GCNGC	9 cut(s)	935, 1334, 1593, 1705, 1893, 1956, 2025, 2049, 2172
GsaI	CCCAGC	2 cut(s)	1884, 2148
GsuI	CTGGAG	1 cut(s)	2196
HaeIII	GGCC	2 cut(s)	410, 1421
HapII	CCGG	1 cut(s)	279
HhaI	GCGC	3 cut(s)	6, 1095, 1342
Hin6I	GCGC	3 cut(s)	4, 1093, 1340
HinP1I	GCGC	3 cut(s)	4, 1093, 1340
HincII	GTYRAC	4 cut(s)	106, 1461, 1498, 1804
HindII	GTYRAC	4 cut(s)	106, 1461, 1498, 1804
HindIII	AAGCTT	1 cut(s)	1389
HinfI	GANTC	9 cut(s)	230, 290, 523, 571, 845, 905, 1057, 1145, 1529
HpaII	CCGG	1 cut(s)	279
HphI	GGTGA	4 cut(s)	113, 1075, 2080, 2095
Hpy166II	GTNNAC	9 cut(s)	106, 605, 780, 1117, 1278, 1461, 1498, 1804, 1904
Hpy188I	TCNGA	7 cut(s)	558, 631, 713, 850, 1353, 1484, 1558
Hpy188III	TCNNGA	4 cut(s)	1533, 1724, 1852, 1862
Hpy8I	GTNNAC	9 cut(s)	106, 605, 780, 1117, 1278, 1461, 1498, 1804, 1904
Hpy99I	CGWCG	2 cut(s)	480, 623
HpyAV	CCTTC	5 cut(s)	491, 1024, 1028, 1721, 1859
HpyCH4III	ACNGT	5 cut(s)	1014, 1121, 1495, 1610, 2089
HpyCH4IV	ACGT	3 cut(s)	519, 1566, 1941
HpyF3I	CTNAG	5 cut(s)	482, 630, 1717, 1755, 2107
HpySE526I	ACGT	3 cut(s)	519, 1566, 1941
HspAI	GCGC	3 cut(s)	4, 1093, 1340
KflI	GGGWCCC	1 cut(s)	283
Ksp22I	TGATCA	3 cut(s)	213, 1297, 1348
Kzo9I	GATC	7 cut(s)	213, 328, 367, 850, 1297, 1348, 1468
LmnI	GCTCC	5 cut(s)	360, 819, 1164, 1257, 1833
Lsp1109I	GCAGC	8 cut(s)	1320, 1579, 1716, 1879, 1942, 2035, 2036, 2158
LweI	GCATC	5 cut(s)	889, 991, 1168, 2035, 2172
MaeI	CTAG	4 cut(s)	783, 1097, 1628, 2168
MaeII	ACGT	3 cut(s)	519, 1566, 1941
MaeIII	GTNAC	9 cut(s)	248, 515, 751, 1008, 1054, 1123, 1675, 1937, 2083
MalI	GATC	7 cut(s)	215, 330, 369, 852, 1299, 1350, 1470
MboI	GATC	7 cut(s)	213, 328, 367, 850, 1297, 1348, 1468
MboII	GAAGA	9 cut(s)	133, 540, 596, 715, 1064, 1306, 1461, 2073, 2230
MfeI	CAATTG	2 cut(s)	1195, 1305
MhlI	GDGCHC	6 cut(s)	607, 782, 1119, 1262, 1432, 1906
MlyI	GAGTC	2 cut(s)	580, 1051
MmeI	TCCRAC	2 cut(s)	841, 1462
MroXI	GAANNNNTTC	1 cut(s)	707
MseI	TTAA	7 cut(s)	309, 402, 771, 872, 915, 924, 1871
MslI	CAYNNNNRTG	1 cut(s)	704
MspI	CCGG	1 cut(s)	279
MspR9I	CCNGG	2 cut(s)	280, 412
MunI	CAATTG	2 cut(s)	1195, 1305
Mva1269I	GAATGC	1 cut(s)	2239
MvaI	CCWGG	1 cut(s)	412
MvnI	CGCG	1 cut(s)	6
NciI	CCSGG	1 cut(s)	280
NcoI	CCATGG	3 cut(s)	258, 817, 1708
NdeI	CATATG	2 cut(s)	1597, 1833
NdeII	GATC	7 cut(s)	213, 328, 367, 850, 1297, 1348, 1468
NlaIV	GGNNCC	3 cut(s)	284, 285, 362
NmuCI	GTSAC	5 cut(s)	1008, 1054, 1675, 1937, 2083
NspI	RCATGY	5 cut(s)	165, 1504, 1810, 2133, 2210
NspV	TTCGAA	1 cut(s)	1447
PaeI	GCATGC	1 cut(s)	2210
PaqCI	CACCTGC	1 cut(s)	2018
PciI	ACATGT	2 cut(s)	1500, 1806
PctI	GAATGC	1 cut(s)	2239
PdmI	GAANNNNTTC	1 cut(s)	707
PfeI	GAWTC	7 cut(s)	230, 290, 523, 845, 905, 1145, 1529
PflMI	CCANNNNNTGG	1 cut(s)	823
PkrI	GCNGC	9 cut(s)	936, 1335, 1594, 1706, 1894, 1957, 2026, 2050, 2173
PleI	GAGTC	2 cut(s)	579, 1051
PpsI	GAGTC	2 cut(s)	579, 1051
Ppu21I	YACGTR	1 cut(s)	520
PpuMI	RGGWCCY	1 cut(s)	283
PscI	ACATGT	2 cut(s)	1500, 1806
Psp1406I	AACGTT	1 cut(s)	1566
Psp5II	RGGWCCY	1 cut(s)	283
Psp6I	CCWGG	1 cut(s)	410
PspFI	CCCAGC	2 cut(s)	1880, 2144
PspGI	CCWGG	1 cut(s)	410
PspN4I	GGNNCC	3 cut(s)	284, 285, 362
PspPI	GGNCC	2 cut(s)	283, 1419
PspPPI	RGGWCCY	1 cut(s)	283
PstI	CTGCAG	3 cut(s)	1338, 1468, 1706
PstNI	CAGNNNCTG	2 cut(s)	293, 1955
RsaI	GTAC	4 cut(s)	19, 510, 995, 1505
RsaNI	GTAC	4 cut(s)	18, 509, 994, 1504
RseI	CAYNNNNRTG	1 cut(s)	704
SaqAI	TTAA	7 cut(s)	309, 402, 771, 872, 915, 924, 1871
SatI	GCNGC	9 cut(s)	935, 1334, 1593, 1705, 1893, 1956, 2025, 2049, 2172
Sau3AI	GATC	7 cut(s)	213, 328, 367, 850, 1297, 1348, 1468
Sau96I	GGNCC	2 cut(s)	283, 1419
SchI	GAGTC	2 cut(s)	580, 1051
ScrFI	CCNGG	2 cut(s)	280, 412
SduI	GDGCHC	6 cut(s)	607, 782, 1119, 1262, 1432, 1906
SfaNI	GCATC	5 cut(s)	889, 991, 1168, 2035, 2172
SfcI	CTRYAG	5 cut(s)	832, 1334, 1464, 1702, 2190
SfuI	TTCGAA	1 cut(s)	1447
SinI	GGWCC	1 cut(s)	283
SmiMI	CAYNNNNRTG	1 cut(s)	704
SmlI	CTYRAG	2 cut(s)	1970, 2011
SmoI	CTYRAG	2 cut(s)	1970, 2011
SpeI	ACTAGT	1 cut(s)	782
SphI	GCATGC	1 cut(s)	2210
SsiI	CCGC	5 cut(s)	531, 758, 902, 935, 1515
SspI	AATATT	2 cut(s)	346, 1069
SspMI	CTAG	4 cut(s)	783, 1097, 1628, 2168
StyD4I	CCNGG	2 cut(s)	278, 410
StyI	CCWWGG	3 cut(s)	258, 817, 1708
TaaI	ACNGT	5 cut(s)	1014, 1121, 1495, 1610, 2089
TaiI	ACGT	3 cut(s)	522, 1569, 1944
TaqI	TCGA	5 cut(s)	618, 1203, 1407, 1447, 1508
TatI	WGTACW	2 cut(s)	508, 1503
TauI	GCSGC	1 cut(s)	937
TfiI	GAWTC	7 cut(s)	230, 290, 523, 845, 905, 1145, 1529
Tru1I	TTAA	7 cut(s)	309, 402, 771, 872, 915, 924, 1871
Tru9I	TTAA	7 cut(s)	309, 402, 771, 872, 915, 924, 1871
TscAI	CASTG	4 cut(s)	769, 1017, 1124, 1680
TseFI	GTSAC	5 cut(s)	1008, 1054, 1675, 1937, 2083
TseI	GCWGC	8 cut(s)	1333, 1592, 1704, 1892, 1955, 2024, 2048, 2171
Tsp45I	GTSAC	5 cut(s)	1008, 1054, 1675, 1937, 2083
TspDTI	ATGAA	9 cut(s)	222, 510, 716, 942, 1065, 1619, 1635, 1661, 2231
TspGWI	ACGGA	1 cut(s)	541
TspRI	CASTG	4 cut(s)	769, 1017, 1124, 1680
Van91I	CCANNNNNTGG	1 cut(s)	823
VneI	GTGCAC	4 cut(s)	603, 778, 1115, 1902
VpaK11BI	GGWCC	1 cut(s)	283
XapI	RAATTY	3 cut(s)	376, 958, 1165
XceI	RCATGY	5 cut(s)	165, 1504, 1810, 2133, 2210
XmnI	GAANNNNTTC	1 cut(s)	707
XspI	CTAG	4 cut(s)	783, 1097, 1628, 2168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.