Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0014273

Physical Location & Seq

Genomic Coordinates Reverse (-)

15463435 .. 15465720

Gene Structure 2286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g11880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGTTGGAAATGCGCTTCCCCACGATTCCAAACCTTTCCAATTGCAATGTGAGGCTCAAAGAGCTATCATCTAATGGAAAATGGCAAGAACTACTCTGCCACCACCATGAAATCCAGAAATCTGGACTTAAACTGACAGACCCTTCAGCCTTCCCTCCAATCCTCAAAGCATGCTCAACCCTCCGCTCCTCCGCCTTTGGAAAGGCTGTGCACGGAGGCTTGATCAAGACCGGATTCGAGTCGTACACTTCCGTGGCGAATTCCGCCATGGATTTTTACGTTAAAACAGGGGAATTGGGTTCTGCATTGTGTATTTTTAATGGCACGAGGAGCAGAGATGGAGTTTCTTGGAATATTGTGGTTTGTGGGTGCCTTGATCAGGGTGATTTGGAACAAGGGTTGTGGTGGTTTAACAATGCTAGGGTTTATGCTGATGGGTGTCAGTTTCAACCCAATAATTCTACTTTGGTGCTTGTAATCCAAGCGTGTCGCCACCTCCGGGATAAGTGTGAGGGGCTGATCGTACATGGTTATGTGATTCGAGGCGGGTTTTGCTTTGTATCTTCGGTTCAGAACTCTTTGTTGAGTCTGTATGCAGAGGAAGGTGACATGGACAGCGCGCAGAACGTGTTCGACGAAATGCGTGAGAGAGACGTTATCTCTTGGAGTGTGATGATTGGGGGCTTTGTGCGTTGTGAGGAAGCTCTAATTGGGATGCGGATGTTCCGAAGGATGGTAGCCGAGCTTGGCATTGAACCGGATGGTGTTACAATGGTCAGTATTCTTAAAGCATGCACTAATTTGAAGGACTTGACAATGGGACAGTCGATCCATGGGTTGGTAATCTGTAGAGGTTTAGATTGTGATATGTTCGTTGGAAACTCTTTGATTGATATGTATTCCAAGTGCAGTGATGCAGATTCTGCATTTAAAATTTTCAAGGCAATGCCGCGAAGGAATAAGGTCTCGTGGAATTCTATTTTATCTGGATTTGTGTTTAACGAGAAGCATTTGGAGTCCCTGTCACTGTTTTTCTCTATGAGGAATGAAGGAATTGAGGTGGACGAAGTGACTCTTGTGAATGTTCTTCAAACATCCGAACATTTGGGCTTGATTCAATGCAAGTCGGTGCACTGCGTAACAATCAGGCAGGGATACGAATCAAATGAATTGCTCCTGAATTCTCTCATGGATGCCTATGCAAAGTGCAACGATGTTGAACTTGCATGGAAACTTTTTAGAGGGATGAAGAAAAGAGATGTGGTTTCGTGGAGCAACATGATTGGAGGGTTTGCTAGTTGTGGCAGACCCGATGAAGCAATCGCCGTATTCAACGAGATGATGAGGCTGCAGGGACAAGATCACAAGCCCAATGAGATCACCATCATAAATCTTTTTGACGCTTGTTCAGCTTCAGCCCAATTGAAGAGGTCGAAATGGGCTCATGGAATTGCTATCAGAAGAGGTTTGGCAGCACAAGTAGCTGTCGGAACCGCAATTGTTGACATGTACTCGAAATGTGGGGCAATAGGAGAATCGAGAAAGGCTTTTGGACAAATTCTTGAAAAAAACGTCGTCTCATGGAGTGCAATGATAGCTGCGTATGGAATGAACGGTCTTGGCCATGAAGCAGTAGCTTTACTTGCTGAAATGAAGCTGTATGGTTTGAAACCAAATGCAGTGACCATTCTTTCTGTGCTATCTGCGTGTAGCCATGGAGGTTTAGTCGAAGAGGGCCTTTCCTTGTTCAATTCGATGGTTCAAGATCACGGCATTGAACAAAAACTGGAACATTACACTTGTGTAGTTGACATGCTGGCCCGAGCAGGAAAGCTTGTAATGGCAATGGAATTTATTAAGAAAATCCCAGAAAGTTTGATGGCCGCCAGAACAAGTAATGCTTGGGGTGCATTATTGAGCGCTTGCAGAAGCTATAGGAACAGCAAAGTTGGTTTTGAAGCCGCCTCTCGTGTGCTTGAGCTGGAGCCTGAAAACTCAGCCGGGTACTTACTGGCGTCGAGCATTTATGCAGCGAACGGGTTGTGGGTCGATGCTGCAAGTATGAGAAGGTTGGTGAAGGAAAGAAGGGTGAGGGTTGTGGCTGGTTACAGTGTAGTGAATGTTGGTAACAAGGCATGTAGATTTGTTGCTGGTAATGGTAATTCCCACTCCAAATCCGTTTCACTATCTCATGGAAATATGCACTCAATGCTTGAGCTGTTGCATGCCTGCATGTTCAAGACCGGAAACAGGAATATTGTTGATGATTTCGACTTAATTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE PPR PPR_2

Protein Analysis

762

Amino Acids

83.83

Weight (kDa)

7.48

Isoelectric Point (pI)

34.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	393 - 421	9.1e-06	PPR repeat family
PPR_2	PF13041	419 - 469	3.3e-08	PPR repeat family
PPR	PF01535	422 - 449	5e-07	PPR repeat
PPR_2	PF13041	523 - 571	1.4e-09	PPR repeat family
PPR	PF01535	526 - 555	8.3e-06	PPR repeat
E_motif	PF20431	645 - 706	1.9e-08	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17210
fragaria_vesca	FvH4_2g09980 FvH4_2g09980
malus_domestica	MD05G1134800.v1.1 MD10G1139900.v1.1
prunus_persica	Prupe.8G178700_v2.0.a1
pyrus_communis	pycom10g11880
rosa_chinensis	RchiOBHm_Chr6g0266861
rosa_laevigata	RLG00000014068
rosa_multiflora	Rmu_sc0013959.1_g000001
rosa_roxburghii	Rroxscaffold_7G00201400
rosa_rugosa	Rorug06G0027700
rosa_samantha	Rh6AG148700 Rh6BG149800 Rh6CG144700 Rh6DG133900
rosa_wichuraiana	Rw6G012870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	369
AccB7I	CCANNNNNTGG	1 cut(s)	838
AccBSI	CCGCTC	1 cut(s)	186
AccII	CGCG	2 cut(s)	620, 952
AciI	CCGC	9 cut(s)	184, 192, 264, 546, 718, 950, 1494, 1884, 1962
AclWI	GGATC	1 cut(s)	823
AcoI	YGGCCR	2 cut(s)	1621, 1881
AcsI	RAATTY	6 cut(s)	259, 933, 973, 1180, 1557, 1850
AcuI	CTGAAG	2 cut(s)	129, 1398
AcyI	GRCGYC	1 cut(s)	2015
AfaI	GTAC	4 cut(s)	245, 525, 1511, 2006
AfeI	AGCGCT	1 cut(s)	1921
AfiI	CCNNNNNNNGG	5 cut(s)	379, 499, 733, 838, 2250
AflIII	ACRYGT	2 cut(s)	627, 1506
AjuI	GAANNNNNNNTTGG	2 cut(s)	693, 725
AleI	CACNNNNGTG	1 cut(s)	251
Alw21I	GWGCWC	2 cut(s)	213, 1134
Alw26I	GTCTC	3 cut(s)	645, 970, 1582
Alw44I	GTGCAC	2 cut(s)	209, 1130
AlwI	GGATC	1 cut(s)	823
AlwNI	CAGNNNCTG	1 cut(s)	923
Ama87I	CYCGRG	1 cut(s)	1821
Aor51HI	AGCGCT	1 cut(s)	1921
AoxI	GGCC	4 cut(s)	1621, 1735, 1818, 1881
ApaLI	GTGCAC	2 cut(s)	209, 1130
ApeKI	GCWGC	5 cut(s)	1348, 1472, 1598, 2030, 2054
ApoI	RAATTY	6 cut(s)	259, 933, 973, 1180, 1557, 1850
Asp700I	GAANNNNTTC	1 cut(s)	629
AspLEI	GCGC	4 cut(s)	15, 620, 622, 1922
AspS9I	GGNCC	2 cut(s)	1735, 1819
AsuC2I	CCSGG	2 cut(s)	500, 2002
AsuHPI	GGTGA	5 cut(s)	395, 617, 1372, 2086, 2101
AvaI	CYCGRG	1 cut(s)	1821
BaeGI	GKGCMC	2 cut(s)	213, 1134
BalI	TGGCCA	1 cut(s)	1623
BanI	GGYRCC	1 cut(s)	369
BanII	GRGCYC	1 cut(s)	1444
BauI	CACGAG	3 cut(s)	325, 967, 1968
Bbv12I	GWGCWC	2 cut(s)	213, 1134
BbvI	GCAGC	5 cut(s)	1335, 1484, 1585, 2041, 2042
BccI	CCATC	7 cut(s)	332, 428, 727, 755, 1391, 1750, 1873
BceAI	ACGGC	2 cut(s)	1310, 1786
BciVI	GTATCC	1 cut(s)	1148
BclI	TGATCA	2 cut(s)	222, 376
BcnI	CCSGG	2 cut(s)	500, 2002
BcoDI	GTCTC	3 cut(s)	645, 970, 1582
BfaI	CTAG	2 cut(s)	420, 1296
BfmI	CTRYAG	3 cut(s)	847, 1349, 1933
BfoI	RGCGCY	1 cut(s)	1923
BfuI	GTATCC	1 cut(s)	1148
BisI	GCNGC	8 cut(s)	950, 1349, 1473, 1599, 1884, 1962, 2031, 2055
BlsI	GCNGC	8 cut(s)	951, 1350, 1474, 1600, 1885, 1963, 2032, 2056
Bme1390I	CCNGG	2 cut(s)	500, 2002
BmeT110I	CYCGRG	1 cut(s)	1821
BmgT120I	GGNCC	2 cut(s)	1735, 1819
BmiI	GGNNCC	3 cut(s)	371, 1492, 1986
BmrFI	CCNGG	2 cut(s)	500, 2002
BmsI	GCATC	4 cut(s)	705, 904, 1183, 2041
BpmI	CTGGAG	1 cut(s)	2003
BpuEI	CTTGAG	2 cut(s)	1997, 2234
BpuMI	CCSGG	2 cut(s)	500, 2002
BsaBI	GATNNNNATC	2 cut(s)	1159, 1382
BsaHI	GRCGYC	1 cut(s)	2015
BsaI	GGTCTC	1 cut(s)	970
BsaJI	CCNNGG	4 cut(s)	252, 267, 832, 1714
BsaWI	WCCGGW	3 cut(s)	230, 757, 2243
BsaXI	ACNNNNNCTCC	4 cut(s)	1007, 1037, 1710, 1740
Bsc4I	CCNNNNNNNGG	5 cut(s)	379, 499, 733, 838, 2250
Bse1I	ACTGG	2 cut(s)	1791, 2016
Bse3DI	GCAATG	4 cut(s)	52, 951, 1596, 1851
Bse8I	GATNNNNATC	2 cut(s)	1159, 1382
BseDI	CCNNGG	4 cut(s)	252, 267, 832, 1714
BseGI	GGATG	7 cut(s)	720, 726, 738, 766, 1094, 1198, 1251
BseJI	GATNNNNATC	2 cut(s)	1159, 1382
BseLI	CCNNNNNNNGG	5 cut(s)	379, 499, 733, 838, 2250
BseMI	GCAATG	4 cut(s)	52, 951, 1596, 1851
BseMII	CTCAG	1 cut(s)	2010
BseNI	ACTGG	2 cut(s)	1791, 2016
BsePI	GCGCGC	1 cut(s)	618
BseRI	GAGGAG	2 cut(s)	178, 343
BseSI	GKGCMC	2 cut(s)	213, 1134
BseXI	GCAGC	5 cut(s)	1335, 1484, 1585, 2041, 2042
BsgI	GTGCAG	1 cut(s)	928
Bsh1236I	CGCG	2 cut(s)	620, 952
BshFI	GGCC	4 cut(s)	1623, 1737, 1820, 1883
BshNI	GGYRCC	1 cut(s)	369
BsiHKAI	GWGCWC	2 cut(s)	213, 1134
BsiHKCI	CYCGRG	1 cut(s)	1821
BsiSI	CCGG	5 cut(s)	231, 499, 758, 2001, 2244
BslFI	GGGAC	3 cut(s)	834, 1003, 1368
BslI	CCNNNNNNNGG	5 cut(s)	379, 499, 733, 838, 2250
BsmAI	GTCTC	3 cut(s)	645, 970, 1582
BsmBI	CGTCTC	2 cut(s)	645, 1582
BsmFI	GGGAC	3 cut(s)	834, 1003, 1368
BsnI	GGCC	4 cut(s)	1623, 1737, 1820, 1883
Bso31I	GGTCTC	1 cut(s)	970
BsoBI	CYCGRG	1 cut(s)	1821
Bsp1286I	GDGCHC	3 cut(s)	213, 1134, 1444
Bsp143I	GATC	7 cut(s)	222, 376, 519, 828, 1360, 1377, 1765
Bsp19I	CCATGG	3 cut(s)	267, 832, 1714
BspACI	CCGC	9 cut(s)	184, 192, 264, 546, 718, 950, 1494, 1884, 1962
BspANI	GGCC	4 cut(s)	1623, 1737, 1820, 1883
BspCNI	CTCAG	1 cut(s)	2009
BspFNI	CGCG	2 cut(s)	620, 952
BspLI	GGNNCC	3 cut(s)	371, 1492, 1986
BspMAI	CTGCAG	1 cut(s)	1353
BspPI	GGATC	1 cut(s)	823
BspT107I	GGYRCC	1 cut(s)	369
BspTNI	GGTCTC	1 cut(s)	970
BsrBI	CCGCTC	1 cut(s)	186
BsrDI	GCAATG	4 cut(s)	52, 951, 1596, 1851
BsrI	ACTGG	2 cut(s)	1791, 2016
BssECI	CCNNGG	4 cut(s)	252, 267, 832, 1714
BssHII	GCGCGC	1 cut(s)	618
BssMI	GATC	7 cut(s)	222, 376, 519, 828, 1360, 1377, 1765
BssNI	GRCGYC	1 cut(s)	2015
BssSI	CACGAG	3 cut(s)	325, 967, 1968
BssT1I	CCWWGG	3 cut(s)	267, 832, 1714
Bst2BI	CACGAG	3 cut(s)	325, 967, 1968
Bst4CI	ACNGT	4 cut(s)	825, 1029, 1616, 2111
Bst6I	CTCTTC	3 cut(s)	1421, 1456, 1725
BstACI	GRCGYC	1 cut(s)	2015
BstAPI	GCANNNNNTGC	2 cut(s)	923, 2209
BstC8I	GCNNGC	7 cut(s)	172, 620, 793, 1818, 1924, 2226, 2230
BstDEI	CTNAG	1 cut(s)	1996
BstDSI	CCRYGG	4 cut(s)	252, 267, 832, 1714
BstENI	CCTNNNNNAGG	1 cut(s)	377
BstF5I	GGATG	7 cut(s)	720, 726, 738, 766, 1094, 1198, 1251
BstFNI	CGCG	2 cut(s)	620, 952
BstH2I	RGCGCY	1 cut(s)	1923
BstHHI	GCGC	4 cut(s)	15, 620, 622, 1922
BstKTI	GATC	7 cut(s)	225, 379, 522, 831, 1363, 1380, 1768
BstMAI	GTCTC	3 cut(s)	645, 970, 1582
BstMBI	GATC	7 cut(s)	222, 376, 519, 828, 1360, 1377, 1765
BstNSI	RCATGY	7 cut(s)	174, 795, 1510, 1816, 2139, 2228, 2236
BstSCI	CCNGG	2 cut(s)	498, 2000
BstSFI	CTRYAG	3 cut(s)	847, 1349, 1933
BstSLI	GKGCMC	2 cut(s)	213, 1134
BstUI	CGCG	2 cut(s)	620, 952
BstV1I	GCAGC	5 cut(s)	1335, 1484, 1585, 2041, 2042
BstXI	CCANNNNNNTGG	1 cut(s)	122
BsuI	GTATCC	1 cut(s)	1148
BsuRI	GGCC	4 cut(s)	1623, 1737, 1820, 1883
BtgI	CCRYGG	4 cut(s)	252, 267, 832, 1714
BtsCI	GGATG	7 cut(s)	720, 726, 738, 766, 1094, 1198, 1251
BtsI	GCAGTG	3 cut(s)	916, 1132, 1686
BtsIMutI	CAGTG	5 cut(s)	916, 1025, 1132, 1686, 2116
Cac8I	GCNNGC	7 cut(s)	172, 620, 793, 1818, 1924, 2226, 2230
CaiI	CAGNNNCTG	1 cut(s)	923
CfoI	GCGC	4 cut(s)	15, 620, 622, 1922
Cfr13I	GGNCC	2 cut(s)	1735, 1819
CseI	GACGC	2 cut(s)	1409, 2004
Csp6I	GTAC	4 cut(s)	244, 524, 1510, 2005
CspCI	CAANNNNNGTGG	2 cut(s)	383, 418
CviQI	GTAC	4 cut(s)	244, 524, 1510, 2005
DdeI	CTNAG	1 cut(s)	1996
DpnI	GATC	7 cut(s)	224, 378, 521, 830, 1362, 1379, 1767
DpnII	GATC	7 cut(s)	222, 376, 519, 828, 1360, 1377, 1765
DraI	TTTAAA	1 cut(s)	931
EaeI	YGGCCR	2 cut(s)	1621, 1881
Eam1104I	CTCTTC	3 cut(s)	1421, 1456, 1725
EarI	CTCTTC	3 cut(s)	1421, 1456, 1725
EciI	GGCGGA	2 cut(s)	181, 253
Eco130I	CCWWGG	3 cut(s)	267, 832, 1714
Eco24I	GRGCYC	1 cut(s)	1444
Eco31I	GGTCTC	1 cut(s)	970
Eco47III	AGCGCT	1 cut(s)	1921
Eco57I	CTGAAG	2 cut(s)	129, 1398
Eco88I	CYCGRG	1 cut(s)	1821
EcoNI	CCTNNNNNAGG	1 cut(s)	377
EcoO109I	RGGNCCY	1 cut(s)	1735
EcoRI	GAATTC	3 cut(s)	259, 973, 1180
EcoT14I	CCWWGG	3 cut(s)	267, 832, 1714
EcoT38I	GRGCYC	1 cut(s)	1444
ErhI	CCWWGG	3 cut(s)	267, 832, 1714
Esp3I	CGTCTC	2 cut(s)	645, 1582
FalI	AAGNNNNNCTT	6 cut(s)	1059, 1091, 1722, 1754, 1885, 1917
FaqI	GGGAC	3 cut(s)	834, 1003, 1368
FauI	CCCGC	1 cut(s)	539
FbaI	TGATCA	2 cut(s)	222, 376
Fnu4HI	GCNGC	8 cut(s)	950, 1349, 1473, 1599, 1884, 1962, 2031, 2055
FokI	GGATG	7 cut(s)	727, 733, 745, 773, 1081, 1205, 1258
FriOI	GRGCYC	1 cut(s)	1444
Fsp4HI	GCNGC	8 cut(s)	950, 1349, 1473, 1599, 1884, 1962, 2031, 2055
FspBI	CTAG	2 cut(s)	420, 1296
GlaI	GCGC	4 cut(s)	14, 619, 621, 1921
GluI	GCNGC	8 cut(s)	950, 1349, 1473, 1599, 1884, 1962, 2031, 2055
GsuI	CTGGAG	1 cut(s)	2003
HaeII	RGCGCY	1 cut(s)	1923
HaeIII	GGCC	4 cut(s)	1623, 1737, 1820, 1883
HapII	CCGG	5 cut(s)	231, 499, 758, 2001, 2244
HgaI	GACGC	2 cut(s)	1409, 2004
HhaI	GCGC	4 cut(s)	15, 620, 622, 1922
Hin1I	GRCGYC	1 cut(s)	2015
Hin6I	GCGC	4 cut(s)	13, 618, 620, 1920
HinP1I	GCGC	4 cut(s)	13, 618, 620, 1920
HincII	GTYRAC	2 cut(s)	1504, 1810
HindII	GTYRAC	2 cut(s)	1504, 1810
HindIII	AAGCTT	1 cut(s)	1832
HpaII	CCGG	5 cut(s)	231, 499, 758, 2001, 2244
HphI	GGTGA	5 cut(s)	395, 617, 1372, 2086, 2101
Hpy166II	GTNNAC	6 cut(s)	211, 246, 1063, 1132, 1504, 1810
Hpy188I	TCNGA	5 cut(s)	573, 728, 1099, 1460, 1490
Hpy188III	TCNNGA	9 cut(s)	115, 123, 226, 987, 1177, 1539, 1562, 1763, 2239
Hpy8I	GTNNAC	6 cut(s)	211, 246, 1063, 1132, 1504, 1810
Hpy99I	CGWCG	3 cut(s)	638, 1577, 2020
HpyCH4III	ACNGT	4 cut(s)	825, 1029, 1616, 2111
HpyCH4IV	ACGT	4 cut(s)	279, 627, 654, 1572
HpyF3I	CTNAG	1 cut(s)	1996
HpySE526I	ACGT	4 cut(s)	279, 627, 654, 1572
Hsp92I	GRCGYC	1 cut(s)	2015
HspAI	GCGC	4 cut(s)	13, 618, 620, 1920
Ksp22I	TGATCA	2 cut(s)	222, 376
Kzo9I	GATC	7 cut(s)	222, 376, 519, 828, 1360, 1377, 1765
LmnI	GCTCC	5 cut(s)	191, 330, 1179, 1272, 1984
Lsp1109I	GCAGC	5 cut(s)	1335, 1484, 1585, 2041, 2042
LweI	GCATC	4 cut(s)	705, 904, 1183, 2041
MaeI	CTAG	2 cut(s)	420, 1296
MaeII	ACGT	4 cut(s)	279, 627, 654, 1572
MaeIII	GTNAC	8 cut(s)	605, 766, 1023, 1069, 1138, 1681, 2105, 2126
MalI	GATC	7 cut(s)	224, 378, 521, 830, 1362, 1379, 1767
MbiI	CCGCTC	1 cut(s)	186
MboI	GATC	7 cut(s)	222, 376, 519, 828, 1360, 1377, 1765
MboII	GAAGA	6 cut(s)	555, 1079, 1261, 1438, 1473, 1742
MfeI	CAATTG	3 cut(s)	40, 1421, 1497
MhlI	GDGCHC	3 cut(s)	213, 1134, 1444
MlsI	TGGCCA	1 cut(s)	1623
MluNI	TGGCCA	1 cut(s)	1623
MlyI	GAGTC	4 cut(s)	248, 595, 1025, 1066
MmeI	TCCRAC	2 cut(s)	856, 1468
Mox20I	TGGCCA	1 cut(s)	1623
MroXI	GAANNNNTTC	1 cut(s)	629
MscI	TGGCCA	1 cut(s)	1623
MseI	TTAA	9 cut(s)	129, 282, 318, 411, 786, 930, 999, 1857, 2276
MslI	CAYNNNNRTG	3 cut(s)	105, 251, 531
Msp20I	TGGCCA	1 cut(s)	1623
MspI	CCGG	5 cut(s)	231, 499, 758, 2001, 2244
MspR9I	CCNGG	2 cut(s)	500, 2002
MunI	CAATTG	3 cut(s)	40, 1421, 1497
MvnI	CGCG	2 cut(s)	620, 952
NciI	CCSGG	2 cut(s)	500, 2002
NcoI	CCATGG	3 cut(s)	267, 832, 1714
NdeII	GATC	7 cut(s)	222, 376, 519, 828, 1360, 1377, 1765
NlaIV	GGNNCC	3 cut(s)	371, 1492, 1986
NmeAIII	GCCGAG	1 cut(s)	766
NmuCI	GTSAC	4 cut(s)	605, 1023, 1069, 1681
NspI	RCATGY	7 cut(s)	174, 795, 1510, 1816, 2139, 2228, 2236
OliI	CACNNNNGTG	1 cut(s)	251
PaeI	GCATGC	3 cut(s)	174, 795, 2228
PauI	GCGCGC	1 cut(s)	618
PciI	ACATGT	1 cut(s)	1506
PcsI	WCGNNNNNNNCGW	1 cut(s)	633
PdmI	GAANNNNTTC	1 cut(s)	629
PfeI	GAWTC	7 cut(s)	25, 234, 538, 920, 1114, 1160, 1535
PflMI	CCANNNNNTGG	1 cut(s)	838
PfoI	TCCNGGA	1 cut(s)	498
PkrI	GCNGC	8 cut(s)	951, 1350, 1474, 1600, 1885, 1963, 2032, 2056
PleI	GAGTC	4 cut(s)	247, 594, 1024, 1066
PpsI	GAGTC	4 cut(s)	247, 594, 1024, 1066
PscI	ACATGT	1 cut(s)	1506
PspN4I	GGNNCC	3 cut(s)	371, 1492, 1986
PspPI	GGNCC	2 cut(s)	1735, 1819
PsrI	GAACNNNNNNTAC	2 cut(s)	552, 584
PstI	CTGCAG	1 cut(s)	1353
PstNI	CAGNNNCTG	1 cut(s)	923
PteI	GCGCGC	1 cut(s)	618
RsaI	GTAC	4 cut(s)	245, 525, 1511, 2006
RsaNI	GTAC	4 cut(s)	244, 524, 1510, 2005
RseI	CAYNNNNRTG	3 cut(s)	105, 251, 531
SaqAI	TTAA	9 cut(s)	129, 282, 318, 411, 786, 930, 999, 1857, 2276
SatI	GCNGC	8 cut(s)	950, 1349, 1473, 1599, 1884, 1962, 2031, 2055
Sau3AI	GATC	7 cut(s)	222, 376, 519, 828, 1360, 1377, 1765
Sau96I	GGNCC	2 cut(s)	1735, 1819
SchI	GAGTC	4 cut(s)	248, 595, 1025, 1066
ScrFI	CCNGG	2 cut(s)	500, 2002
SduI	GDGCHC	3 cut(s)	213, 1134, 1444
SfaNI	GCATC	4 cut(s)	705, 904, 1183, 2041
SfcI	CTRYAG	3 cut(s)	847, 1349, 1933
SmiMI	CAYNNNNRTG	3 cut(s)	105, 251, 531
SmlI	CTYRAG	2 cut(s)	1976, 2213
SmoI	CTYRAG	2 cut(s)	1976, 2213
SphI	GCATGC	3 cut(s)	174, 795, 2228
SsiI	CCGC	9 cut(s)	184, 192, 264, 546, 718, 950, 1494, 1884, 1962
SspI	AATATT	2 cut(s)	355, 2257
SspMI	CTAG	2 cut(s)	420, 1296
StyD4I	CCNGG	2 cut(s)	498, 2000
StyI	CCWWGG	3 cut(s)	267, 832, 1714
TaaI	ACNGT	4 cut(s)	825, 1029, 1616, 2111
TaiI	ACGT	4 cut(s)	282, 630, 657, 1575
TatI	WGTACW	1 cut(s)	1509
TauI	GCSGC	3 cut(s)	952, 1886, 1964
TfiI	GAWTC	7 cut(s)	25, 234, 538, 920, 1114, 1160, 1535
Tru1I	TTAA	9 cut(s)	129, 282, 318, 411, 786, 930, 999, 1857, 2276
Tru9I	TTAA	9 cut(s)	129, 282, 318, 411, 786, 930, 999, 1857, 2276
TscAI	CASTG	5 cut(s)	916, 1032, 1139, 1686, 2116
TseFI	GTSAC	4 cut(s)	605, 1023, 1069, 1681
TseI	GCWGC	5 cut(s)	1348, 1472, 1598, 2030, 2054
Tsp45I	GTSAC	4 cut(s)	605, 1023, 1069, 1681
TspDTI	ATGAA	8 cut(s)	123, 1062, 1182, 1262, 1329, 1625, 1641, 1667
TspGWI	ACGGA	3 cut(s)	228, 241, 2167
TspRI	CASTG	5 cut(s)	916, 1032, 1139, 1686, 2116
Van91I	CCANNNNNTGG	1 cut(s)	838
VneI	GTGCAC	2 cut(s)	209, 1130
XagI	CCTNNNNNAGG	1 cut(s)	377
XapI	RAATTY	6 cut(s)	259, 933, 973, 1180, 1557, 1850
XceI	RCATGY	7 cut(s)	174, 795, 1510, 1816, 2139, 2228, 2236
XmnI	GAANNNNTTC	1 cut(s)	629
XspI	CTAG	2 cut(s)	420, 1296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.