Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0014273

Physical Location & Seq

Genomic Coordinates Forward (+)

19151387 .. 19153651

Gene Structure 2265 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG133900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

ATGCGCGTTCCAAGCGGTACCAACCTCTATAATTGGCATTTGAAGCTCAAAGAGTTATCATCCAATAGAAAATGGGTAGAATTACTCTGCCATTACCATCAAGTAAACAAAGCTGGACTTCACCCAACACACTATTCAGTCTTCCCTCCAATTCTCAAAGCATGTTCAAACCTCCTTTCCTACTCCTACGGAAAATCTATACATGGGTGTTTGATCAAAACCGGGTGTGATTCCTACACTTCCATTGCTAACTCCACCATGGACTTCTACATCAAAACCAGGGACCCAGATTCTGCATTGGGTGTTTTTAACTCTATGAGGTGGAGAGATCAAGTTTCTTGGAATATTATGGTTTATGGGAGCCTTGATCTGGGGAATTTAGAACAAGGGTTATGGTGGTTTAACAAGGCCAGGGTTTCGGTTTGTGGGTTTCAACCCAATACTTCTACTCTGGTACTCGTAATTCAAGCCTGTCGTTGGCTTAGAGCAGCTATATATGAAGGACTGAAAGTACATGGTTACGTGATTCAAGGCGGGTTCTGTTATATATCTTCAGTTCAGAACTCGTTGTTGAGTCTGTATGCAGAAGATGATGACATGGAGAGTGCACACAAGCTGTTCGACGAAATGTCTGAGAGAGATGTCATCTCTTGGAGTGTGATGATAGGAGGTTATGTGCATTGCGAGGAAGCTCAAATCGGCATGAAGATGTTCCGAAAGATGGTATGTGAGCTTGGCATTGAACCAGATGGCGTAACTGCGGTCAGTTTTCTTAAAGGGTGCACTAGTTTGAGGGACTTGACCATGGGAACATCGCTCCATGGGTTGGTAATCTATAGAGGGTTAGATTCTGATCTGTTTGTTGGAAACTCTTTAATTGATATGTATGCCAAGTGTAGTGATGCGGATTCTGCCTTTAAAGTTTTTGAGGAGTTGCCGCAAAGAAATAGGGTCTCATGGAATTCTATGTTGTCTGCATTTGTCCATAATGAGAGGTACATGGATGCCCTGTCGCTGTTTTATTCTATGGGGAAGGAAGGTATCAACGCAGATGAAGTGACTCTGGTGAATATTCTTCAAACATGCAAGCATTTGCACCTAGGTCATTCCAAGTCAGTGCACTGTGTAACAATCAGGTGGCGATTTGAATCAAATGAGTTGCTCCTGAATTCGCTCATTGATGCTTATGCAAAGTGTAATAGTATTGAGCTTGCATGGAAACTTTTTGAAAGGATGAAGAAAAGAGATGTGGTTTCGTGGAGCACTATGATTGCAGGGTTTACACATTGTGGCAGACCTGATCAAGCAATTGCCATCTTCGGAGAGATGACAAGGCTGCAGGCACAGGATGATCAGAAGCCCAATGAGATTACACTCATAAATCTTTTTGAAGCTTGTTCAGTTTCAGCCGAATTGAAATGGGCCAAAGGGGCACATGGAATTGCTATTCGAAGAGGTTTGTCAACTGCAGATCAAGTAGCCATTGGAACTGCAATTGTTGACATGTACTCGAAATGCGGGGCAATAGGAGAATCAAGAAAGGTGTTCGACCAGATTTCCAAAAAAAACATTGTGTCATGGAGTGCCATGATAGCTGCATATGGCATGAATGGTCTTGCACATGAAGCTCTAGCTTTGGTTGAGGAAATGAAGCTGTATGGTGCAAAGCCAAATGCAGTGACCACCCTTTCTATGCTATCTGCCTGCAGCCATGGAGGCTTAGTTGAAGAAGGGCTCTCCTTGTTCAACTCACTTGTTCAAGTTTATGGAATTGAACCAAGATTGGAACATTATGCGTGTGTAGTTGACATGTTGGGTCGAGCAGGAAAGCTCCATATGGCTATGGATTTTATCAAGAACATTCCAGAAGGTTTAAAGGTCACTGGGGAAAATGCTGCTTGGAGTGCATTATTGAGTGCTTGTAGAAGCTATGGCAATAGTGACGTTGGCGCAGTAGCTGCTTCTCATGTCCTTGAGTTAGAGCCTGAAAGTTCAACTGGGTATTTACTTGCCTCAAGTATTTATGCAGCAGGTGGGTTGTGGGTTGATGCTGCAAGTATTAGAAGAATGGTGAAAGAAAAAGAGGTGAAGGTTGTTGCTGGTTATAGCTTAGTTTATGTTGATAACAAGGCATGTAGATTTGTTGCTGGGGATATTGATTGCCATTCACTAGCTGCTGGAGAGATGCACTCTATAGTTGAGCTGTTGCATGCTTGTATGAAGACTGAAAAGAGAAATGCTGGTAATTTTGATATAATTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE PPR PPR_2

Protein Analysis

754

Amino Acids

83.58

Weight (kDa)

6.35

Isoelectric Point (pI)

36.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	316 - 362	3.9e-07	PPR repeat family
PPR	PF01535	318 - 348	7e-06	PPR repeat
PPR_2	PF13041	389 - 417	2.9e-06	PPR repeat family
PPR	PF01535	390 - 416	7.8e-06	PPR repeat
PPR_2	PF13041	415 - 466	5.2e-06	PPR repeat family
PPR_2	PF13041	522 - 570	1.6e-09	PPR repeat family
PPR	PF01535	525 - 554	5.3e-06	PPR repeat
E_motif	PF20431	644 - 705	3.8e-08	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014273)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17210
fragaria_vesca	FvH4_2g09980 FvH4_2g09980
malus_domestica	MD05G1134800.v1.1 MD10G1139900.v1.1
prunus_persica	Prupe.8G178700_v2.0.a1
pyrus_communis	pycom10g11880
rosa_chinensis	RchiOBHm_Chr6g0266861
rosa_laevigata	RLG00000014068
rosa_multiflora	Rmu_sc0013959.1_g000001
rosa_roxburghii	Rroxscaffold_7G00201400
rosa_rugosa	Rorug06G0027700
rosa_samantha	Rh6AG148700 Rh6BG149800 Rh6CG144700 Rh6DG133900
rosa_wichuraiana	Rw6G012870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2021
Acc36I	ACCTGC	1 cut(s)	2021
Acc65I	GGTACC	1 cut(s)	17
AccB1I	GGYRCC	1 cut(s)	17
AccB7I	CCANNNNNTGG	1 cut(s)	826
AccII	CGCG	1 cut(s)	6
AciI	CCGC	6 cut(s)	15, 534, 761, 905, 938, 1518
AcsI	RAATTY	3 cut(s)	376, 961, 1168
AcuI	CTGAAG	1 cut(s)	537
AdeI	CACNNNGTG	1 cut(s)	1289
AfaI	GTAC	5 cut(s)	19, 456, 513, 998, 1508
AfiI	CCNNNNNNNGG	4 cut(s)	370, 477, 721, 826
AflIII	ACRYGT	2 cut(s)	1503, 1809
AhdI	GACNNNNNGTC	1 cut(s)	628
AhlI	ACTAGT	1 cut(s)	785
AjnI	CCWGG	2 cut(s)	278, 410
AjuI	GAANNNNNNNTTGG	2 cut(s)	118, 150
Alw21I	GWGCWC	4 cut(s)	610, 785, 1122, 1265
Alw26I	GTCTC	1 cut(s)	958
Alw44I	GTGCAC	3 cut(s)	606, 781, 1118
AlwNI	CAGNNNCTG	2 cut(s)	293, 1958
AoxI	GGCC	2 cut(s)	408, 1422
ApaLI	GTGCAC	3 cut(s)	606, 781, 1118
ApeKI	GCWGC	9 cut(s)	488, 1336, 1595, 1707, 1895, 1958, 2027, 2051, 2174
ApoI	RAATTY	3 cut(s)	376, 961, 1168
Asp700I	GAANNNNTTC	1 cut(s)	710
Asp718I	GGTACC	1 cut(s)	17
AspA2I	CCTAGG	1 cut(s)	1099
AspLEI	GCGC	2 cut(s)	6, 1952
AspS9I	GGNCC	2 cut(s)	283, 1422
AsuC2I	CCSGG	1 cut(s)	223
AsuHPI	GGTGA	4 cut(s)	113, 1078, 2083, 2098
AsuII	TTCGAA	1 cut(s)	1450
AvaII	GGWCC	1 cut(s)	283
AvrII	CCTAGG	1 cut(s)	1099
BaeGI	GKGCMC	4 cut(s)	610, 785, 1122, 1435
BanI	GGYRCC	1 cut(s)	17
BanII	GRGCYC	1 cut(s)	1737
BbsI	GAAGAC	2 cut(s)	133, 2228
Bbv12I	GWGCWC	4 cut(s)	610, 785, 1122, 1265
BbvI	GCAGC	9 cut(s)	500, 1323, 1582, 1719, 1882, 1945, 2038, 2039, 2161
BccI	CCATC	4 cut(s)	105, 715, 743, 1322
BciT130I	CCWGG	2 cut(s)	280, 412
BclI	TGATCA	3 cut(s)	213, 1300, 1351
BcnI	CCSGG	1 cut(s)	223
BcoDI	GTCTC	1 cut(s)	958
BcuI	ACTAGT	1 cut(s)	785
BfaI	CTAG	4 cut(s)	786, 1100, 1631, 2171
BfmI	CTRYAG	5 cut(s)	835, 1337, 1467, 1705, 2193
BfuAI	ACCTGC	1 cut(s)	2021
BglI	GCCNNNNNGGC	2 cut(s)	1430, 1716
BlnI	CCTAGG	1 cut(s)	1099
Bme1390I	CCNGG	3 cut(s)	223, 280, 412
Bme18I	GGWCC	1 cut(s)	283
BmeRI	GACNNNNNGTC	1 cut(s)	628
BmgT120I	GGNCC	2 cut(s)	283, 1422
BmiI	GGNNCC	4 cut(s)	19, 284, 285, 362
BmrFI	CCNGG	3 cut(s)	223, 280, 412
BmrI	ACTGGG	2 cut(s)	1893, 2007
BmsI	GCATC	5 cut(s)	892, 994, 1171, 2038, 2175
BmuI	ACTGGG	2 cut(s)	1893, 2007
BpiI	GAAGAC	2 cut(s)	133, 2228
BplI	GAGNNNNNCTC	2 cut(s)	2174, 2206
BpmI	CTGGAG	1 cut(s)	2199
Bpu14I	TTCGAA	1 cut(s)	1450
BpuEI	CTTGAG	2 cut(s)	1994, 1999
BpuMI	CCSGG	1 cut(s)	223
BsaAI	YACGTR	1 cut(s)	523
BsaBI	GATNNNNATC	2 cut(s)	852, 1147
BsaI	GGTCTC	1 cut(s)	958
BsaJI	CCNNGG	7 cut(s)	258, 279, 411, 804, 820, 1099, 1711
BsaXI	ACNNNNNCTCC	4 cut(s)	660, 690, 1707, 1737
Bsc4I	CCNNNNNNNGG	4 cut(s)	370, 477, 721, 826
Bse1I	ACTGG	2 cut(s)	1888, 2002
Bse3DI	GCAATG	2 cut(s)	243, 679
Bse8I	GATNNNNATC	2 cut(s)	852, 1147
BseBI	CCWGG	2 cut(s)	280, 412
BseDI	CCNNGG	7 cut(s)	258, 279, 411, 804, 820, 1099, 1711
BseGI	GGATG	4 cut(s)	59, 1009, 1239, 1354
BseJI	GATNNNNATC	2 cut(s)	852, 1147
BseLI	CCNNNNNNNGG	4 cut(s)	370, 477, 721, 826
BseMI	GCAATG	2 cut(s)	243, 679
BseMII	CTCAG	1 cut(s)	624
BseNI	ACTGG	2 cut(s)	1888, 2002
BseRI	GAGGAG	1 cut(s)	944
BseSI	GKGCMC	4 cut(s)	610, 785, 1122, 1435
BseXI	GCAGC	9 cut(s)	500, 1323, 1582, 1719, 1882, 1945, 2038, 2039, 2161
BseYI	CCCAGC	1 cut(s)	2147
Bsh1236I	CGCG	1 cut(s)	6
BshFI	GGCC	2 cut(s)	410, 1424
BshNI	GGYRCC	1 cut(s)	17
BsiHKAI	GWGCWC	4 cut(s)	610, 785, 1122, 1265
BsiSI	CCGG	1 cut(s)	222
BslFI	GGGAC	2 cut(s)	296, 809
BslI	CCNNNNNNNGG	4 cut(s)	370, 477, 721, 826
BsmAI	GTCTC	1 cut(s)	958
BsmFI	GGGAC	2 cut(s)	296, 809
BsnI	GGCC	2 cut(s)	410, 1424
Bso31I	GGTCTC	1 cut(s)	958
Bsp119I	TTCGAA	1 cut(s)	1450
Bsp1286I	GDGCHC	6 cut(s)	610, 785, 1122, 1265, 1435, 1737
Bsp143I	GATC	7 cut(s)	213, 328, 367, 853, 1300, 1351, 1471
Bsp19I	CCATGG	4 cut(s)	258, 804, 820, 1711
BspACI	CCGC	6 cut(s)	15, 534, 761, 905, 938, 1518
BspANI	GGCC	2 cut(s)	410, 1424
BspCNI	CTCAG	1 cut(s)	625
BspFNI	CGCG	1 cut(s)	6
BspLI	GGNNCC	4 cut(s)	19, 284, 285, 362
BspMAI	CTGCAG	3 cut(s)	1341, 1471, 1709
BspMI	ACCTGC	1 cut(s)	2021
BspT104I	TTCGAA	1 cut(s)	1450
BspT107I	GGYRCC	1 cut(s)	17
BspTNI	GGTCTC	1 cut(s)	958
BsrDI	GCAATG	2 cut(s)	243, 679
BsrI	ACTGG	2 cut(s)	1888, 2002
BssECI	CCNNGG	7 cut(s)	258, 279, 411, 804, 820, 1099, 1711
BssMI	GATC	7 cut(s)	213, 328, 367, 853, 1300, 1351, 1471
BssT1I	CCWWGG	5 cut(s)	258, 804, 820, 1099, 1711
Bst2UI	CCWGG	2 cut(s)	280, 412
Bst4CI	ACNGT	1 cut(s)	1124
Bst6I	CTCTTC	1 cut(s)	1447
BstAPI	GCANNNNNTGC	1 cut(s)	1958
BstBAI	YACGTR	1 cut(s)	523
BstBI	TTCGAA	1 cut(s)	1450
BstC8I	GCNNGC	5 cut(s)	1088, 1212, 1341, 1705, 2211
BstDEI	CTNAG	4 cut(s)	482, 633, 1720, 2110
BstDSI	CCRYGG	4 cut(s)	258, 804, 820, 1711
BstF5I	GGATG	4 cut(s)	59, 1009, 1239, 1354
BstFNI	CGCG	1 cut(s)	6
BstHHI	GCGC	2 cut(s)	6, 1952
BstKTI	GATC	7 cut(s)	216, 331, 370, 856, 1303, 1354, 1474
BstMAI	GTCTC	1 cut(s)	958
BstMBI	GATC	7 cut(s)	213, 328, 367, 853, 1300, 1351, 1471
BstMWI	GCNNNNNNNGC	9 cut(s)	12, 43, 911, 1430, 1592, 1625, 1716, 1904, 1958
BstNI	CCWGG	2 cut(s)	280, 412
BstNSI	RCATGY	6 cut(s)	165, 1086, 1507, 1813, 2136, 2213
BstSCI	CCNGG	3 cut(s)	221, 278, 410
BstSFI	CTRYAG	5 cut(s)	835, 1337, 1467, 1705, 2193
BstSLI	GKGCMC	4 cut(s)	610, 785, 1122, 1435
BstUI	CGCG	1 cut(s)	6
BstV1I	GCAGC	9 cut(s)	500, 1323, 1582, 1719, 1882, 1945, 2038, 2039, 2161
BstV2I	GAAGAC	2 cut(s)	133, 2228
BsuRI	GGCC	2 cut(s)	410, 1424
BtgI	CCRYGG	4 cut(s)	258, 804, 820, 1711
BtgZI	GCGATG	1 cut(s)	798
BtsCI	GGATG	4 cut(s)	59, 1009, 1239, 1354
BtsI	GCAGTG	1 cut(s)	1683
BtsIMutI	CAGTG	4 cut(s)	1120, 1122, 1683, 1881
BveI	ACCTGC	1 cut(s)	2021
Cac8I	GCNNGC	5 cut(s)	1088, 1212, 1341, 1705, 2211
CaiI	CAGNNNCTG	2 cut(s)	293, 1958
CfoI	GCGC	2 cut(s)	6, 1952
Cfr13I	GGNCC	2 cut(s)	283, 1422
Csp6I	GTAC	5 cut(s)	18, 455, 512, 997, 1507
CviQI	GTAC	5 cut(s)	18, 455, 512, 997, 1507
DdeI	CTNAG	4 cut(s)	482, 633, 1720, 2110
DpnI	GATC	7 cut(s)	215, 330, 369, 855, 1302, 1353, 1473
DpnII	GATC	7 cut(s)	213, 328, 367, 853, 1300, 1351, 1471
DraI	TTTAAA	2 cut(s)	919, 1875
DraIII	CACNNNGTG	1 cut(s)	1289
DriI	GACNNNNNGTC	1 cut(s)	628
Eam1104I	CTCTTC	1 cut(s)	1447
Eam1105I	GACNNNNNGTC	1 cut(s)	628
EarI	CTCTTC	1 cut(s)	1447
Eco130I	CCWWGG	5 cut(s)	258, 804, 820, 1099, 1711
Eco24I	GRGCYC	1 cut(s)	1737
Eco31I	GGTCTC	1 cut(s)	958
Eco47I	GGWCC	1 cut(s)	283
Eco57I	CTGAAG	1 cut(s)	537
EcoO109I	RGGNCCY	1 cut(s)	283
EcoRI	GAATTC	2 cut(s)	961, 1168
EcoRII	CCWGG	2 cut(s)	278, 410
EcoT14I	CCWWGG	5 cut(s)	258, 804, 820, 1099, 1711
EcoT38I	GRGCYC	1 cut(s)	1737
ErhI	CCWWGG	5 cut(s)	258, 804, 820, 1099, 1711
FalI	AAGNNNNNCTT	2 cut(s)	102, 134
FaqI	GGGAC	2 cut(s)	296, 809
FauI	CCCGC	2 cut(s)	527, 1511
FauNDI	CATATG	2 cut(s)	1600, 1836
FbaI	TGATCA	3 cut(s)	213, 1300, 1351
FokI	GGATG	4 cut(s)	46, 1016, 1246, 1361
FriOI	GRGCYC	1 cut(s)	1737
FspBI	CTAG	4 cut(s)	786, 1100, 1631, 2171
GlaI	GCGC	2 cut(s)	5, 1951
GsaI	CCCAGC	1 cut(s)	2151
GsuI	CTGGAG	1 cut(s)	2199
HaeIII	GGCC	2 cut(s)	410, 1424
HapII	CCGG	1 cut(s)	222
HhaI	GCGC	2 cut(s)	6, 1952
Hin6I	GCGC	2 cut(s)	4, 1950
HinP1I	GCGC	2 cut(s)	4, 1950
HincII	GTYRAC	3 cut(s)	1464, 1501, 1807
HindII	GTYRAC	3 cut(s)	1464, 1501, 1807
HindIII	AAGCTT	1 cut(s)	1392
HinfI	GANTC	9 cut(s)	230, 290, 526, 574, 848, 908, 1060, 1148, 1532
HpaII	CCGG	1 cut(s)	222
HphI	GGTGA	4 cut(s)	113, 1078, 2083, 2098
Hpy166II	GTNNAC	8 cut(s)	106, 608, 783, 1120, 1281, 1464, 1501, 1807
Hpy188I	TCNGA	6 cut(s)	561, 634, 716, 853, 1322, 1356
Hpy188III	TCNNGA	4 cut(s)	1165, 1536, 1855, 1865
Hpy8I	GTNNAC	8 cut(s)	106, 608, 783, 1120, 1281, 1464, 1501, 1807
Hpy99I	CGWCG	1 cut(s)	626
HpyAV	CCTTC	6 cut(s)	494, 1027, 1031, 1724, 1862, 2083
HpyCH4III	ACNGT	1 cut(s)	1124
HpyCH4IV	ACGT	2 cut(s)	522, 1944
HpyF10VI	GCNNNNNNNGC	9 cut(s)	12, 43, 911, 1430, 1592, 1625, 1716, 1904, 1958
HpyF3I	CTNAG	4 cut(s)	482, 633, 1720, 2110
HpySE526I	ACGT	2 cut(s)	522, 1944
HspAI	GCGC	2 cut(s)	4, 1950
KflI	GGGWCCC	1 cut(s)	283
KpnI	GGTACC	1 cut(s)	21
Ksp22I	TGATCA	3 cut(s)	213, 1300, 1351
Kzo9I	GATC	7 cut(s)	213, 328, 367, 853, 1300, 1351, 1471
LmnI	GCTCC	5 cut(s)	360, 822, 1167, 1260, 1836
Lsp1109I	GCAGC	9 cut(s)	500, 1323, 1582, 1719, 1882, 1945, 2038, 2039, 2161
LweI	GCATC	5 cut(s)	892, 994, 1171, 2038, 2175
MaeI	CTAG	4 cut(s)	786, 1100, 1631, 2171
MaeII	ACGT	2 cut(s)	522, 1944
MaeIII	GTNAC	7 cut(s)	518, 754, 1057, 1126, 1678, 1879, 1940
MalI	GATC	7 cut(s)	215, 330, 369, 855, 1302, 1353, 1473
MboI	GATC	7 cut(s)	213, 328, 367, 853, 1300, 1351, 1471
MfeI	CAATTG	2 cut(s)	1308, 1494
MhlI	GDGCHC	6 cut(s)	610, 785, 1122, 1265, 1435, 1737
MlyI	GAGTC	2 cut(s)	583, 1054
MmeI	TCCRAC	1 cut(s)	844
MroXI	GAANNNNTTC	1 cut(s)	710
MseI	TTAA	6 cut(s)	309, 402, 774, 875, 918, 1874
MslI	CAYNNNNRTG	1 cut(s)	707
MspI	CCGG	1 cut(s)	222
MspR9I	CCNGG	3 cut(s)	223, 280, 412
MunI	CAATTG	2 cut(s)	1308, 1494
MvaI	CCWGG	2 cut(s)	280, 412
MvnI	CGCG	1 cut(s)	6
MwoI	GCNNNNNNNGC	9 cut(s)	12, 43, 911, 1430, 1592, 1625, 1716, 1904, 1958
NciI	CCSGG	1 cut(s)	223
NcoI	CCATGG	4 cut(s)	258, 804, 820, 1711
NdeI	CATATG	2 cut(s)	1600, 1836
NdeII	GATC	7 cut(s)	213, 328, 367, 853, 1300, 1351, 1471
NlaIV	GGNNCC	4 cut(s)	19, 284, 285, 362
NmuCI	GTSAC	4 cut(s)	1057, 1678, 1879, 1940
NspI	RCATGY	6 cut(s)	165, 1086, 1507, 1813, 2136, 2213
NspV	TTCGAA	1 cut(s)	1450
PaeI	GCATGC	1 cut(s)	2213
PaqCI	CACCTGC	1 cut(s)	2021
PciI	ACATGT	2 cut(s)	1503, 1809
PdmI	GAANNNNTTC	1 cut(s)	710
PfeI	GAWTC	7 cut(s)	230, 290, 526, 848, 908, 1148, 1532
PflMI	CCANNNNNTGG	1 cut(s)	826
PleI	GAGTC	2 cut(s)	582, 1054
PpsI	GAGTC	2 cut(s)	582, 1054
Ppu21I	YACGTR	1 cut(s)	523
PpuMI	RGGWCCY	1 cut(s)	283
PscI	ACATGT	2 cut(s)	1503, 1809
Psp5II	RGGWCCY	1 cut(s)	283
Psp6I	CCWGG	2 cut(s)	278, 410
PspFI	CCCAGC	1 cut(s)	2147
PspGI	CCWGG	2 cut(s)	278, 410
PspN4I	GGNNCC	4 cut(s)	19, 284, 285, 362
PspPI	GGNCC	2 cut(s)	283, 1422
PspPPI	RGGWCCY	1 cut(s)	283
PstI	CTGCAG	3 cut(s)	1341, 1471, 1709
PstNI	CAGNNNCTG	2 cut(s)	293, 1958
RsaI	GTAC	5 cut(s)	19, 456, 513, 998, 1508
RsaNI	GTAC	5 cut(s)	18, 455, 512, 997, 1507
RseI	CAYNNNNRTG	1 cut(s)	707
SaqAI	TTAA	6 cut(s)	309, 402, 774, 875, 918, 1874
Sau3AI	GATC	7 cut(s)	213, 328, 367, 853, 1300, 1351, 1471
Sau96I	GGNCC	2 cut(s)	283, 1422
SchI	GAGTC	2 cut(s)	583, 1054
ScrFI	CCNGG	3 cut(s)	223, 280, 412
SduI	GDGCHC	6 cut(s)	610, 785, 1122, 1265, 1435, 1737
SfaNI	GCATC	5 cut(s)	892, 994, 1171, 2038, 2175
SfcI	CTRYAG	5 cut(s)	835, 1337, 1467, 1705, 2193
SfuI	TTCGAA	1 cut(s)	1450
SinI	GGWCC	1 cut(s)	283
SmiMI	CAYNNNNRTG	1 cut(s)	707
SmlI	CTYRAG	2 cut(s)	1973, 2014
SmoI	CTYRAG	2 cut(s)	1973, 2014
SpeI	ACTAGT	1 cut(s)	785
SphI	GCATGC	1 cut(s)	2213
SsiI	CCGC	6 cut(s)	15, 534, 761, 905, 938, 1518
SspI	AATATT	2 cut(s)	346, 1072
SspMI	CTAG	4 cut(s)	786, 1100, 1631, 2171
StyD4I	CCNGG	3 cut(s)	221, 278, 410
StyI	CCWWGG	5 cut(s)	258, 804, 820, 1099, 1711
TaaI	ACNGT	1 cut(s)	1124
TaiI	ACGT	2 cut(s)	525, 1947
TaqI	TCGA	5 cut(s)	621, 1450, 1511, 1548, 1819
TatI	WGTACW	2 cut(s)	511, 1506
TauI	GCSGC	1 cut(s)	940
TfiI	GAWTC	7 cut(s)	230, 290, 526, 848, 908, 1148, 1532
Tru1I	TTAA	6 cut(s)	309, 402, 774, 875, 918, 1874
Tru9I	TTAA	6 cut(s)	309, 402, 774, 875, 918, 1874
TscAI	CASTG	4 cut(s)	1122, 1127, 1683, 1888
TseFI	GTSAC	4 cut(s)	1057, 1678, 1879, 1940
TseI	GCWGC	9 cut(s)	488, 1336, 1595, 1707, 1895, 1958, 2027, 2051, 2174
Tsp45I	GTSAC	4 cut(s)	1057, 1678, 1879, 1940
TspDTI	ATGAA	8 cut(s)	513, 719, 1068, 1250, 1622, 1638, 1664, 2234
TspGWI	ACGGA	1 cut(s)	204
TspRI	CASTG	4 cut(s)	1122, 1127, 1683, 1888
Van91I	CCANNNNNTGG	1 cut(s)	826
VneI	GTGCAC	3 cut(s)	606, 781, 1118
VpaK11BI	GGWCC	1 cut(s)	283
XapI	RAATTY	3 cut(s)	376, 961, 1168
XceI	RCATGY	6 cut(s)	165, 1086, 1507, 1813, 2136, 2213
XmaJI	CCTAGG	1 cut(s)	1099
XmnI	GAANNNNTTC	1 cut(s)	710
XspI	CTAG	4 cut(s)	786, 1100, 1631, 2171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.