Cleavage stimulation factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G71800 |
| fragaria_vesca | FvH4_2g12680 FvH4_2g12680 FvH4_2g12680 FvH4_2g12680 |
| malus_domestica | MD05G1038100.v1.1 MD10G1041800.v1.1 |
| prunus_persica | Prupe.8G045900_v2.0.a1 |
| pyrus_communis | pycom05g02820 pycom10g02890 |
| rosa_chinensis | RchiOBHm_Chr6g0273401 |
| rosa_laevigata | RLG00000013620 |
| rosa_multiflora | Rmu_sc0005891.1_g000012 |
| rosa_roxburghii | Rroxscaffold_7G00195400 |
| rosa_rugosa | Rorug06G0074600 |
| rosa_samantha | Rh6AG189700 Rh6BG193100 Rh6CG192900 Rh6DG184400 |
| rosa_wichuraiana | Rw6G016510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 1055, 1323 |
| AccII | CGCG | 1 cut(s) | 168 |
| AciI | CCGC | 3 cut(s) | 168, 224, 900 |
| AclWI | GGATC | 2 cut(s) | 230, 368 |
| AcsI | RAATTY | 5 cut(s) | 91, 739, 861, 1338, 1476 |
| AcuI | CTGAAG | 2 cut(s) | 567, 1158 |
| AfaI | GTAC | 3 cut(s) | 143, 453, 1047 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 988, 1237 |
| AgsI | TTSAA | 5 cut(s) | 124, 610, 644, 1197, 1260 |
| AjnI | CCWGG | 4 cut(s) | 175, 982, 1093, 1291 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1287, 1319 |
| Alw21I | GWGCWC | 1 cut(s) | 304 |
| Alw26I | GTCTC | 3 cut(s) | 266, 606, 1253 |
| AlwI | GGATC | 2 cut(s) | 230, 368 |
| Ama87I | CYCGRG | 1 cut(s) | 1155 |
| AoxI | GGCC | 5 cut(s) | 217, 491, 586, 616, 731 |
| ApeKI | GCWGC | 6 cut(s) | 281, 284, 787, 799, 1456, 1459 |
| ApoI | RAATTY | 5 cut(s) | 91, 739, 861, 1338, 1476 |
| AspS9I | GGNCC | 6 cut(s) | 173, 218, 311, 616, 731, 1097 |
| AsuHPI | GGTGA | 2 cut(s) | 245, 553 |
| AvaI | CYCGRG | 1 cut(s) | 1155 |
| AvaII | GGWCC | 3 cut(s) | 173, 311, 1097 |
| AxyI | CCTNAGG | 2 cut(s) | 315, 1362 |
| BanII | GRGCYC | 1 cut(s) | 304 |
| BbsI | GAAGAC | 1 cut(s) | 1143 |
| Bbv12I | GWGCWC | 1 cut(s) | 304 |
| BbvI | GCAGC | 6 cut(s) | 293, 296, 799, 811, 1443, 1471 |
| BccI | CCATC | 5 cut(s) | 88, 556, 917, 1091, 1211 |
| BceAI | ACGGC | 1 cut(s) | 272 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1451, 1485 |
| BciT130I | CCWGG | 4 cut(s) | 177, 984, 1095, 1293 |
| BcoDI | GTCTC | 3 cut(s) | 266, 606, 1253 |
| BfaI | CTAG | 7 cut(s) | 146, 305, 392, 405, 467, 659, 848 |
| BfmI | CTRYAG | 2 cut(s) | 279, 1457 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 293 |
| BisI | GCNGC | 6 cut(s) | 282, 285, 788, 800, 1457, 1460 |
| BlsI | GCNGC | 6 cut(s) | 283, 286, 789, 801, 1458, 1461 |
| Bme1390I | CCNGG | 4 cut(s) | 177, 984, 1095, 1293 |
| Bme18I | GGWCC | 3 cut(s) | 173, 311, 1097 |
| BmeT110I | CYCGRG | 1 cut(s) | 1155 |
| BmgT120I | GGNCC | 6 cut(s) | 173, 218, 311, 616, 731, 1097 |
| BmiI | GGNNCC | 2 cut(s) | 627, 1099 |
| BmrFI | CCNGG | 4 cut(s) | 177, 984, 1095, 1293 |
| BmsI | GCATC | 3 cut(s) | 687, 1069, 1129 |
| BpiI | GAAGAC | 1 cut(s) | 1143 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1355, 1387 |
| BpmI | CTGGAG | 1 cut(s) | 198 |
| BpuEI | CTTGAG | 1 cut(s) | 880 |
| BsaI | GGTCTC | 2 cut(s) | 266, 1253 |
| BsaJI | CCNNGG | 1 cut(s) | 982 |
| BsaWI | WCCGGW | 1 cut(s) | 1429 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 859, 889 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 988, 1237 |
| Bse1I | ACTGG | 2 cut(s) | 757, 933 |
| Bse21I | CCTNAGG | 2 cut(s) | 315, 1362 |
| BseBI | CCWGG | 4 cut(s) | 177, 984, 1095, 1293 |
| BseDI | CCNNGG | 1 cut(s) | 982 |
| BseGI | GGATG | 3 cut(s) | 80, 909, 1144 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 988, 1237 |
| BseMII | CTCAG | 9 cut(s) | 329, 485, 509, 663, 938, 1320, 1335, 1353, 1364 |
| BseNI | ACTGG | 2 cut(s) | 757, 933 |
| BseXI | GCAGC | 6 cut(s) | 293, 296, 799, 811, 1443, 1471 |
| BseYI | CCCAGC | 1 cut(s) | 220 |
| BsgI | GTGCAG | 2 cut(s) | 750, 806 |
| Bsh1236I | CGCG | 1 cut(s) | 168 |
| BshFI | GGCC | 5 cut(s) | 219, 493, 588, 618, 733 |
| BsiHKAI | GWGCWC | 1 cut(s) | 304 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1155 |
| BsiSI | CCGG | 1 cut(s) | 1430 |
| BslFI | GGGAC | 2 cut(s) | 1023, 1083 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 988, 1237 |
| BsmAI | GTCTC | 3 cut(s) | 266, 606, 1253 |
| BsmFI | GGGAC | 2 cut(s) | 1023, 1083 |
| BsmI | GAATGC | 1 cut(s) | 801 |
| BsnI | GGCC | 5 cut(s) | 219, 493, 588, 618, 733 |
| Bso31I | GGTCTC | 2 cut(s) | 266, 1253 |
| BsoBI | CYCGRG | 1 cut(s) | 1155 |
| Bsp1286I | GDGCHC | 1 cut(s) | 304 |
| Bsp1407I | TGTACA | 2 cut(s) | 451, 1045 |
| Bsp143I | GATC | 3 cut(s) | 235, 373, 655 |
| BspACI | CCGC | 3 cut(s) | 168, 224, 900 |
| BspANI | GGCC | 5 cut(s) | 219, 493, 588, 618, 733 |
| BspCNI | CTCAG | 9 cut(s) | 328, 484, 508, 664, 937, 1321, 1336, 1354, 1363 |
| BspFNI | CGCG | 1 cut(s) | 168 |
| BspLI | GGNNCC | 2 cut(s) | 627, 1099 |
| BspMAI | CTGCAG | 2 cut(s) | 283, 1461 |
| BspPI | GGATC | 2 cut(s) | 230, 368 |
| BspTNI | GGTCTC | 2 cut(s) | 266, 1253 |
| BsrGI | TGTACA | 2 cut(s) | 451, 1045 |
| BsrI | ACTGG | 2 cut(s) | 757, 933 |
| BssECI | CCNNGG | 1 cut(s) | 982 |
| BssMI | GATC | 3 cut(s) | 235, 373, 655 |
| BssNAI | GTATAC | 1 cut(s) | 1324 |
| Bst1107I | GTATAC | 1 cut(s) | 1324 |
| Bst2UI | CCWGG | 4 cut(s) | 177, 984, 1095, 1293 |
| Bst4CI | ACNGT | 4 cut(s) | 600, 891, 1045, 1125 |
| Bst6I | CTCTTC | 1 cut(s) | 246 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 278 |
| BstAUI | TGTACA | 2 cut(s) | 451, 1045 |
| BstC8I | GCNNGC | 4 cut(s) | 579, 590, 855, 1400 |
| BstEII | GGTNACC | 1 cut(s) | 541 |
| BstF5I | GGATG | 3 cut(s) | 80, 909, 1144 |
| BstFNI | CGCG | 1 cut(s) | 168 |
| BstKTI | GATC | 3 cut(s) | 238, 376, 658 |
| BstMAI | GTCTC | 3 cut(s) | 266, 606, 1253 |
| BstMBI | GATC | 3 cut(s) | 235, 373, 655 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 278, 293, 499, 659, 668, 691, 706, 796, 1480 |
| BstNI | CCWGG | 4 cut(s) | 177, 984, 1095, 1293 |
| BstNSI | RCATGY | 2 cut(s) | 638, 815 |
| BstPI | GGTNACC | 1 cut(s) | 541 |
| BstSCI | CCNGG | 4 cut(s) | 175, 982, 1093, 1291 |
| BstSFI | CTRYAG | 2 cut(s) | 279, 1457 |
| BstUI | CGCG | 1 cut(s) | 168 |
| BstV1I | GCAGC | 6 cut(s) | 293, 296, 799, 811, 1443, 1471 |
| BstV2I | GAAGAC | 1 cut(s) | 1143 |
| BstZ17I | GTATAC | 1 cut(s) | 1324 |
| Bsu36I | CCTNAGG | 2 cut(s) | 315, 1362 |
| BsuRI | GGCC | 5 cut(s) | 219, 493, 588, 618, 733 |
| BtsCI | GGATG | 3 cut(s) | 80, 909, 1144 |
| BtsI | GCAGTG | 1 cut(s) | 842 |
| BtsIMutI | CAGTG | 2 cut(s) | 44, 842 |
| Cac8I | GCNNGC | 4 cut(s) | 579, 590, 855, 1400 |
| Cfr13I | GGNCC | 6 cut(s) | 173, 218, 311, 616, 731, 1097 |
| Csp6I | GTAC | 3 cut(s) | 142, 452, 1046 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 175, 210, 537, 572 |
| CviAII | CATG | 6 cut(s) | 130, 230, 635, 812, 880, 1129 |
| CviQI | GTAC | 3 cut(s) | 142, 452, 1046 |
| DpnI | GATC | 3 cut(s) | 237, 375, 657 |
| DpnII | GATC | 3 cut(s) | 235, 373, 655 |
| Eam1104I | CTCTTC | 1 cut(s) | 246 |
| EarI | CTCTTC | 1 cut(s) | 246 |
| Ecl136II | GAGCTC | 1 cut(s) | 302 |
| Eco147I | AGGCCT | 1 cut(s) | 493 |
| Eco24I | GRGCYC | 1 cut(s) | 304 |
| Eco31I | GGTCTC | 2 cut(s) | 266, 1253 |
| Eco47I | GGWCC | 3 cut(s) | 173, 311, 1097 |
| Eco53kI | GAGCTC | 1 cut(s) | 302 |
| Eco57I | CTGAAG | 2 cut(s) | 567, 1158 |
| Eco81I | CCTNAGG | 2 cut(s) | 315, 1362 |
| Eco88I | CYCGRG | 1 cut(s) | 1155 |
| Eco91I | GGTNACC | 1 cut(s) | 541 |
| EcoICRI | GAGCTC | 1 cut(s) | 302 |
| EcoO65I | GGTNACC | 1 cut(s) | 541 |
| EcoRI | GAATTC | 1 cut(s) | 861 |
| EcoRII | CCWGG | 4 cut(s) | 175, 982, 1093, 1291 |
| EcoT38I | GRGCYC | 1 cut(s) | 304 |
| FaeI | CATG | 6 cut(s) | 133, 233, 638, 815, 883, 1132 |
| FaqI | GGGAC | 2 cut(s) | 1023, 1083 |
| FatI | CATG | 6 cut(s) | 129, 229, 634, 811, 879, 1128 |
| FblI | GTMKAC | 2 cut(s) | 1055, 1323 |
| Fnu4HI | GCNGC | 6 cut(s) | 282, 285, 788, 800, 1457, 1460 |
| FokI | GGATG | 3 cut(s) | 67, 896, 1151 |
| FriOI | GRGCYC | 1 cut(s) | 304 |
| Fsp4HI | GCNGC | 6 cut(s) | 282, 285, 788, 800, 1457, 1460 |
| FspBI | CTAG | 7 cut(s) | 146, 305, 392, 405, 467, 659, 848 |
| GluI | GCNGC | 6 cut(s) | 282, 285, 788, 800, 1457, 1460 |
| GsaI | CCCAGC | 1 cut(s) | 224 |
| GsuI | CTGGAG | 1 cut(s) | 198 |
| HaeIII | GGCC | 5 cut(s) | 219, 493, 588, 618, 733 |
| HapII | CCGG | 1 cut(s) | 1430 |
| Hin1II | CATG | 6 cut(s) | 133, 233, 638, 815, 883, 1132 |
| HincII | GTYRAC | 1 cut(s) | 196 |
| HindII | GTYRAC | 1 cut(s) | 196 |
| HindIII | AAGCTT | 2 cut(s) | 579, 1417 |
| HinfI | GANTC | 7 cut(s) | 409, 418, 1052, 1169, 1178, 1354, 1370 |
| HpaII | CCGG | 1 cut(s) | 1430 |
| HphI | GGTGA | 2 cut(s) | 245, 553 |
| Hpy166II | GTNNAC | 6 cut(s) | 173, 196, 1056, 1306, 1324, 1369 |
| Hpy188III | TCNNGA | 2 cut(s) | 58, 1155 |
| Hpy8I | GTNNAC | 6 cut(s) | 173, 196, 1056, 1306, 1324, 1369 |
| HpyAV | CCTTC | 2 cut(s) | 1203, 1215 |
| HpyCH4III | ACNGT | 4 cut(s) | 600, 891, 1045, 1125 |
| HpyCH4IV | ACGT | 1 cut(s) | 783 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 278, 293, 499, 659, 668, 691, 706, 796, 1480 |
| HpySE526I | ACGT | 1 cut(s) | 783 |
| Hsp92II | CATG | 6 cut(s) | 133, 233, 638, 815, 883, 1132 |
| Kzo9I | GATC | 3 cut(s) | 235, 373, 655 |
| LmnI | GCTCC | 1 cut(s) | 299 |
| Lsp1109I | GCAGC | 6 cut(s) | 293, 296, 799, 811, 1443, 1471 |
| LweI | GCATC | 3 cut(s) | 687, 1069, 1129 |
| MaeI | CTAG | 7 cut(s) | 146, 305, 392, 405, 467, 659, 848 |
| MaeII | ACGT | 1 cut(s) | 783 |
| MaeIII | GTNAC | 5 cut(s) | 181, 541, 630, 972, 1183 |
| MalI | GATC | 3 cut(s) | 237, 375, 657 |
| MboI | GATC | 3 cut(s) | 235, 373, 655 |
| MboII | GAAGA | 6 cut(s) | 233, 717, 930, 1143, 1164, 1454 |
| MfeI | CAATTG | 4 cut(s) | 10, 119, 255, 413 |
| MhlI | GDGCHC | 1 cut(s) | 304 |
| MlyI | GAGTC | 4 cut(s) | 412, 418, 1061, 1364 |
| MmeI | TCCRAC | 4 cut(s) | 193, 890, 937, 1191 |
| MseI | TTAA | 3 cut(s) | 947, 1415, 1452 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1035 |
| MspA1I | CMGCKG | 1 cut(s) | 224 |
| MspI | CCGG | 1 cut(s) | 1430 |
| MspR9I | CCNGG | 4 cut(s) | 177, 984, 1095, 1293 |
| MunI | CAATTG | 4 cut(s) | 10, 119, 255, 413 |
| Mva1269I | GAATGC | 1 cut(s) | 801 |
| MvaI | CCWGG | 4 cut(s) | 177, 984, 1095, 1293 |
| MvnI | CGCG | 1 cut(s) | 168 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 278, 293, 499, 659, 668, 691, 706, 796, 1480 |
| NdeII | GATC | 3 cut(s) | 235, 373, 655 |
| NlaIII | CATG | 6 cut(s) | 133, 233, 638, 815, 883, 1132 |
| NlaIV | GGNNCC | 2 cut(s) | 627, 1099 |
| NmuCI | GTSAC | 5 cut(s) | 181, 541, 630, 972, 1183 |
| NspI | RCATGY | 2 cut(s) | 638, 815 |
| PaeR7I | CTCGAG | 1 cut(s) | 1155 |
| PceI | AGGCCT | 1 cut(s) | 493 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 12 |
| PctI | GAATGC | 1 cut(s) | 801 |
| PfeI | GAWTC | 3 cut(s) | 1169, 1178, 1354 |
| PkrI | GCNGC | 6 cut(s) | 283, 286, 789, 801, 1458, 1461 |
| PleI | GAGTC | 4 cut(s) | 412, 417, 1060, 1364 |
| PpsI | GAGTC | 4 cut(s) | 412, 417, 1060, 1364 |
| Psp124BI | GAGCTC | 1 cut(s) | 304 |
| Psp6I | CCWGG | 4 cut(s) | 175, 982, 1093, 1291 |
| PspEI | GGTNACC | 1 cut(s) | 541 |
| PspFI | CCCAGC | 1 cut(s) | 220 |
| PspGI | CCWGG | 4 cut(s) | 175, 982, 1093, 1291 |
| PspN4I | GGNNCC | 2 cut(s) | 627, 1099 |
| PspPI | GGNCC | 6 cut(s) | 173, 218, 311, 616, 731, 1097 |
| PstI | CTGCAG | 2 cut(s) | 283, 1461 |
| RsaI | GTAC | 3 cut(s) | 143, 453, 1047 |
| RsaNI | GTAC | 3 cut(s) | 142, 452, 1046 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1035 |
| SacI | GAGCTC | 1 cut(s) | 304 |
| SaqAI | TTAA | 3 cut(s) | 947, 1415, 1452 |
| SatI | GCNGC | 6 cut(s) | 282, 285, 788, 800, 1457, 1460 |
| Sau3AI | GATC | 3 cut(s) | 235, 373, 655 |
| Sau96I | GGNCC | 6 cut(s) | 173, 218, 311, 616, 731, 1097 |
| SchI | GAGTC | 4 cut(s) | 412, 418, 1061, 1364 |
| ScrFI | CCNGG | 4 cut(s) | 177, 984, 1095, 1293 |
| SduI | GDGCHC | 1 cut(s) | 304 |
| SfaNI | GCATC | 3 cut(s) | 687, 1069, 1129 |
| SfcI | CTRYAG | 2 cut(s) | 279, 1457 |
| Sfr274I | CTCGAG | 1 cut(s) | 1155 |
| SinI | GGWCC | 3 cut(s) | 173, 311, 1097 |
| SlaI | CTCGAG | 1 cut(s) | 1155 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1035 |
| SmlI | CTYRAG | 2 cut(s) | 895, 1155 |
| SmoI | CTYRAG | 2 cut(s) | 895, 1155 |
| SseBI | AGGCCT | 1 cut(s) | 493 |
| SsiI | CCGC | 3 cut(s) | 168, 224, 900 |
| SspI | AATATT | 1 cut(s) | 649 |
| SspMI | CTAG | 7 cut(s) | 146, 305, 392, 405, 467, 659, 848 |
| SstI | GAGCTC | 1 cut(s) | 304 |
| StuI | AGGCCT | 1 cut(s) | 493 |
| StyD4I | CCNGG | 4 cut(s) | 175, 982, 1093, 1291 |
| TaaI | ACNGT | 4 cut(s) | 600, 891, 1045, 1125 |
| TaiI | ACGT | 1 cut(s) | 786 |
| TaqI | TCGA | 2 cut(s) | 793, 1156 |
| TatI | WGTACW | 2 cut(s) | 451, 1045 |
| TfiI | GAWTC | 3 cut(s) | 1169, 1178, 1354 |
| Tru1I | TTAA | 3 cut(s) | 947, 1415, 1452 |
| Tru9I | TTAA | 3 cut(s) | 947, 1415, 1452 |
| TscAI | CASTG | 2 cut(s) | 51, 849 |
| TseFI | GTSAC | 5 cut(s) | 181, 541, 630, 972, 1183 |
| TseI | GCWGC | 6 cut(s) | 281, 284, 787, 799, 1456, 1459 |
| Tsp45I | GTSAC | 5 cut(s) | 181, 541, 630, 972, 1183 |
| TspDTI | ATGAA | 8 cut(s) | 146, 218, 233, 377, 740, 1019, 1145, 1220 |
| TspGWI | ACGGA | 2 cut(s) | 618, 931 |
| TspRI | CASTG | 2 cut(s) | 51, 849 |
| VpaK11BI | GGWCC | 3 cut(s) | 173, 311, 1097 |
| XapI | RAATTY | 5 cut(s) | 91, 739, 861, 1338, 1476 |
| XceI | RCATGY | 2 cut(s) | 638, 815 |
| XhoI | CTCGAG | 1 cut(s) | 1155 |
| XmiI | GTMKAC | 2 cut(s) | 1055, 1323 |
| XspI | CTAG | 7 cut(s) | 146, 305, 392, 405, 467, 659, 848 |