Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0011097

Physical Location & Seq

Genomic Coordinates Forward (+)

37676416 .. 37683482

Gene Structure 7067 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00195400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGTGTCGGTGGCGATGGTGGTGGCTCCGTCTCCGGCTCGATTTGCCTTAAAGTTGTCACCCGTAATGGGGAAAGATGTAGCTCTTGGAGCACTTAACACCGCCATTGCTCTCTACCTCACCATCTCTCGTCCTCCTCCTCGCCCTCCTCCGTCGCCCGAGGTCCACAAAGTCTTCGCCTCTAGGAAACCCGAGATGCTCCTCCTCCACCTCCCCCACTCCTCCCCGCTCCAAAGAGTACGAAATCGAGGAGGCACCGCCAAGCCCACTACCAAGACTTCATCCAAGCACTTCATCCAAGTCGGAGATTCGGTGGCAAGAGAGGTGGATCTAGGAATCAAGCGGTGGCAAGTTGGGAATATTCCTTATGATGCCACTGAGGAACAGCTTATAGAAATCTGCCAGGAGGTTGGCCCTGTTGTATCTTTTAGGTTAGTTATTGATAGAGAGACTGGGAAACCAAAAGGTTATGGATTTTGTGAGTACAAGGATGAAGAGACAGCTTTAAGTGCTCGGCGTAATCTTCAGGGCTACGAGATCAATGGCCGCCAATTACGAGTTGATTTTGCTGAAAATGACAAAGGCACTGACAGAAATCGTGAACAGGGTCGTGGTGGACCTGGAGTGACTGCAAATGTTGACCCTCCAAAGCAAGTTGGAGGTGCAGCGGTTCATGGTGATTCTCTTCATAATCAGCCAATTGGTCTCCATAGAGCAATAAATGCAGCAGCCGTCATGGCAGGAGCTCTAGGTGGTCCTCAGGCTGTTTTGCAGTCAAATCAAAATGGTTTGCAGAATCAGTCTGCATTGGCCAATGATCCTTTGACACTTCATCTAGCCAAAATGTCTAGGAGTCAATTGACTCAAATTATCTCGGAGGTCAAAGGAATGGCTATGCAAAACAAGGAACTAGCTCATAAGTTATTTGTTGCAAGGCCACAGTTGCCAAAAGCTCTGTTTCAGTTTAACCTATTGGCTTCCCTTTTTCAGTTGCAGATGGCAAATATCAGGCAAGCTTCAGGCCAGCCCTCACAGCCTCTATTCAATCAGGGCCAACAGGTTCCATCACCTGCTGTTCAAAATCTTGCTGATCTAGCCCCTCCTGCTGAGAATAGGTTGATGCCTAAAATGCAAGATGGCCCATTTTCTGTGGTGCCTCAAAATTTATTGGTTCATAGCCAGTTTTCTGCACCTCGACAACAAAACATGCAGCCTCGAATGCAGCTTCCACAACATGCGAACCACAATGTTTTGCAACATGGCACACTGTTAGGGCAGGCTGGAATTCCAACACTTCCTCCCATGCACCCGCAGTCCTCAAGCGGTTTGTCCATTCGGTCACAAGCGCAGGTTGCCAATTCTTCTGTACTAAACCAGAAAATGCAACCTCCTTTGTTACAACACCCTGGTCAGGTCGGGCCTTCACATTTGGGCCATAACACTCCAATGGTTCATCAAAATGCTACCGTACAGCAGTCTCCTTTATCTCGTCCTTTTGCCGATGCCATCTTTCAGCCTGGTCCCTCAATATCTAAGGGTGTCTTACAGTCGATCAACAAGGATGCTGATAGATCTTCTCGAGTGGTAGCTGATTCTTCAGAATCAGTTAATCGCCCTTCAAAACTAATGAAGTTGGATGATGGAAGGAGCACCCCTTTGATGACAGGGGGTCTCAATGTGTCAAATGCCAATGAATCTGCATTCCCCAATGTTTATGGAGCGGGATTGTTGCCTGGAAAGCCTGTTCACAAATCAGAAGACGTGTACTCTGAGAAACAAATTTCTGAGTTCATTCTTAGAACTGGGTATTATTTTGTAGAAAGAAAGTTGTTTGCTGTCCCACTGATGCAGAGATTTTTAGGTGTTTTGAATAGTTGTATTAATGCTAGCACAATTCTGACAGTTGAAATATCCAACCCAAAAGTTAATTATCAGTGGGTAGAGATGCCTCAGATTCCACCTGAGGTGGACTCTGCTTTACTGCAACAAGTTTTGAGCCTGCCACCTGAAAAATTAAGCTTGTTGTCACCAGAACAGCGACAAGAAGTCATTATGCTGCAGCAGAGATTTCGGCGAGATCAGATTCAGCCATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006355 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016458 GO:0016604 GO:0019219 GO:0019222 GO:0031047 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032502 GO:0032991 GO:0034641 GO:0034660 GO:0040007 GO:0042868 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0048589 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0071920 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0098787 GO:0098789 GO:1901360 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

CSTF2_hinge CSTF_C RRM_1

Protein Analysis

698

Amino Acids

76.2

Weight (kDa)

9.65

Isoelectric Point (pI)

59.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	118 - 186	8.9e-21	RNA recognition motif
CSTF2_hinge	PF14327	268 - 329	3.2e-08	Hinge domain of cleavage stimulation factor subunit 2
CSTF_C	PF14304	659 - 692	5.6e-08	Transcription termination and cleavage factor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71800
fragaria_vesca	FvH4_2g12680 FvH4_2g12680 FvH4_2g12680 FvH4_2g12680
malus_domestica	MD05G1038100.v1.1 MD10G1041800.v1.1
prunus_persica	Prupe.8G045900_v2.0.a1
pyrus_communis	pycom05g02820 pycom10g02890
rosa_chinensis	RchiOBHm_Chr6g0273401
rosa_laevigata	RLG00000013620
rosa_multiflora	Rmu_sc0005891.1_g000012
rosa_roxburghii	Rroxscaffold_7G00195400
rosa_rugosa	Rorug06G0074600
rosa_samantha	Rh6AG189700 Rh6BG193100 Rh6CG192900 Rh6DG184400
rosa_wichuraiana	Rw6G016510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1078
Acc36I	ACCTGC	2 cut(s)	1078, 1339
AccB1I	GGYRCC	2 cut(s)	254, 1153
AccBSI	CCGCTC	2 cut(s)	229, 1721
AciI	CCGC	9 cut(s)	102, 227, 258, 343, 547, 668, 1310, 1323, 1721
AclWI	GGATC	2 cut(s)	336, 812
AcoI	YGGCCR	2 cut(s)	544, 810
AcsI	RAATTY	3 cut(s)	1162, 1284, 1779
AcuI	CTGAAG	3 cut(s)	509, 1002, 1581
AfaI	GTAC	5 cut(s)	240, 485, 1368, 1470, 1766
AfiI	CCNNNNNNNGG	3 cut(s)	68, 69, 1411
AflIII	ACRYGT	1 cut(s)	1761
AgsI	TTSAA	5 cut(s)	1045, 1079, 1620, 1870, 1907
AhdI	GACNNNNNGTC	2 cut(s)	1668, 2045
AjiI	CACGTC	1 cut(s)	1762
AjnI	CCWGG	5 cut(s)	402, 619, 1405, 1516, 1732
AloI	GAACNNNNNNTCC	2 cut(s)	1728, 1760
Alw21I	GWGCWC	4 cut(s)	94, 514, 748, 1652
Alw26I	GTCTC	6 cut(s)	36, 443, 491, 710, 1482, 1676
AlwI	GGATC	2 cut(s)	336, 812
Ama87I	CYCGRG	3 cut(s)	158, 191, 1578
AoxI	GGCC	9 cut(s)	412, 544, 810, 935, 1021, 1051, 1138, 1418, 1432
ApeKI	GCWGC	7 cut(s)	665, 725, 728, 1210, 1222, 2056, 2059
ApoI	RAATTY	3 cut(s)	1162, 1284, 1779
AseI	ATTAAT	1 cut(s)	1881
AspLEI	GCGC	1 cut(s)	1348
AspS9I	GGNCC	9 cut(s)	163, 413, 617, 755, 1051, 1139, 1418, 1432, 1520
AsuHPI	GGTGA	5 cut(s)	51, 112, 689, 1059, 2019
AsuNHI	GCTAGC	1 cut(s)	1886
AvaI	CYCGRG	3 cut(s)	158, 191, 1578
AvaII	GGWCC	4 cut(s)	163, 617, 755, 1520
AxyI	CCTNAGG	2 cut(s)	759, 1962
BalI	TGGCCA	1 cut(s)	812
BanI	GGYRCC	2 cut(s)	254, 1153
BanII	GRGCYC	1 cut(s)	748
BbsI	GAAGAC	2 cut(s)	166, 1764
Bbv12I	GWGCWC	4 cut(s)	94, 514, 748, 1652
BbvI	GCAGC	7 cut(s)	677, 737, 740, 1222, 1234, 2043, 2071
BccI	CCATC	7 cut(s)	10, 131, 991, 1072, 1130, 1514, 1634
BceAI	ACGGC	1 cut(s)	716
BcgI	CGANNNNNNTGC	2 cut(s)	2051, 2085
BciT130I	CCWGG	5 cut(s)	404, 621, 1407, 1518, 1734
BcoDI	GTCTC	6 cut(s)	36, 443, 491, 710, 1482, 1676
BfaI	CTAG	8 cut(s)	183, 332, 749, 836, 849, 911, 1094, 1887
BfmI	CTRYAG	1 cut(s)	2057
BfuAI	ACCTGC	2 cut(s)	1078, 1339
BglI	GCCNNNNNGGC	1 cut(s)	737
BglII	AGATCT	1 cut(s)	1571
BisI	GCNGC	8 cut(s)	547, 666, 726, 729, 1211, 1223, 2057, 2060
BlsI	GCNGC	8 cut(s)	548, 667, 727, 730, 1212, 1224, 2058, 2061
Bme1390I	CCNGG	5 cut(s)	404, 621, 1407, 1518, 1734
Bme18I	GGWCC	4 cut(s)	163, 617, 755, 1520
BmeRI	GACNNNNNGTC	2 cut(s)	1668, 2045
BmeT110I	CYCGRG	3 cut(s)	158, 191, 1578
BmgBI	CACGTC	1 cut(s)	1762
BmgT120I	GGNCC	9 cut(s)	163, 413, 617, 755, 1051, 1139, 1418, 1432, 1520
BmiI	GGNNCC	5 cut(s)	27, 256, 1062, 1155, 1522
BmrFI	CCNGG	5 cut(s)	404, 621, 1407, 1518, 1734
BmrI	ACTGGG	2 cut(s)	462, 1812
BmsI	GCATC	7 cut(s)	186, 361, 1110, 1492, 1552, 1836, 1935
BmtI	GCTAGC	1 cut(s)	1890
BmuI	ACTGGG	2 cut(s)	462, 1812
BpiI	GAAGAC	2 cut(s)	166, 1764
BplI	GAGNNNNNCTC	2 cut(s)	1955, 1987
BpmI	CTGGAG	1 cut(s)	642
BpuEI	CTTGAG	1 cut(s)	1303
BsaI	GGTCTC	2 cut(s)	710, 1676
BsaJI	CCNNGG	2 cut(s)	159, 1405
BsaXI	ACNNNNNCTCC	4 cut(s)	297, 327, 1282, 1312
Bsc4I	CCNNNNNNNGG	3 cut(s)	68, 69, 1411
Bse1I	ACTGG	3 cut(s)	457, 1180, 1807
Bse21I	CCTNAGG	2 cut(s)	759, 1962
Bse3DI	GCAATG	1 cut(s)	105
BseBI	CCWGG	5 cut(s)	404, 621, 1407, 1518, 1734
BseDI	CCNNGG	2 cut(s)	159, 1405
BseGI	GGATG	5 cut(s)	281, 294, 496, 1567, 1642
BseLI	CCNNNNNNNGG	3 cut(s)	68, 69, 1411
BseMI	GCAATG	1 cut(s)	105
BseMII	CTCAG	7 cut(s)	369, 773, 1098, 1761, 1776, 1953, 1964
BseNI	ACTGG	3 cut(s)	457, 1180, 1807
BseRI	GAGGAG	7 cut(s)	126, 129, 138, 191, 194, 211, 264
BseXI	GCAGC	7 cut(s)	677, 737, 740, 1222, 1234, 2043, 2071
BsgI	GTGCAG	2 cut(s)	684, 1173
BshFI	GGCC	9 cut(s)	414, 546, 812, 937, 1023, 1053, 1140, 1420, 1434
BshNI	GGYRCC	2 cut(s)	254, 1153
BsiHKAI	GWGCWC	4 cut(s)	94, 514, 748, 1652
BsiHKCI	CYCGRG	3 cut(s)	158, 191, 1578
BsiSI	CCGG	1 cut(s)	35
BslFI	GGGAC	2 cut(s)	1506, 1823
BslI	CCNNNNNNNGG	3 cut(s)	68, 69, 1411
BsmAI	GTCTC	6 cut(s)	36, 443, 491, 710, 1482, 1676
BsmBI	CGTCTC	1 cut(s)	36
BsmFI	GGGAC	2 cut(s)	1506, 1823
BsmI	GAATGC	2 cut(s)	1224, 1700
BsnI	GGCC	9 cut(s)	414, 546, 812, 937, 1023, 1053, 1140, 1420, 1434
Bso31I	GGTCTC	2 cut(s)	710, 1676
BsoBI	CYCGRG	3 cut(s)	158, 191, 1578
Bsp1286I	GDGCHC	4 cut(s)	94, 514, 748, 1652
Bsp143I	GATC	7 cut(s)	328, 537, 817, 1090, 1551, 1571, 2077
BspACI	CCGC	9 cut(s)	102, 227, 258, 343, 547, 668, 1310, 1323, 1721
BspANI	GGCC	9 cut(s)	414, 546, 812, 937, 1023, 1053, 1140, 1420, 1434
BspCNI	CTCAG	7 cut(s)	370, 772, 1099, 1762, 1777, 1954, 1963
BspLI	GGNNCC	5 cut(s)	27, 256, 1062, 1155, 1522
BspMAI	CTGCAG	1 cut(s)	2061
BspMI	ACCTGC	2 cut(s)	1078, 1339
BspOI	GCTAGC	1 cut(s)	1890
BspPI	GGATC	2 cut(s)	336, 812
BspT107I	GGYRCC	2 cut(s)	254, 1153
BspTNI	GGTCTC	2 cut(s)	710, 1676
BsrBI	CCGCTC	2 cut(s)	229, 1721
BsrDI	GCAATG	1 cut(s)	105
BsrI	ACTGG	3 cut(s)	457, 1180, 1807
BssECI	CCNNGG	2 cut(s)	159, 1405
BssMI	GATC	7 cut(s)	328, 537, 817, 1090, 1551, 1571, 2077
Bst2UI	CCWGG	5 cut(s)	404, 621, 1407, 1518, 1734
Bst4CI	ACNGT	5 cut(s)	942, 1269, 1468, 1548, 1903
Bst6I	CTCTTC	2 cut(s)	489, 690
BstAPI	GCANNNNNTGC	1 cut(s)	722
BstC8I	GCNNGC	5 cut(s)	1014, 1025, 1278, 1888, 2000
BstF5I	GGATG	5 cut(s)	281, 294, 496, 1567, 1642
BstHHI	GCGC	1 cut(s)	1348
BstKTI	GATC	7 cut(s)	331, 540, 820, 1093, 1554, 1574, 2080
BstMAI	GTCTC	6 cut(s)	36, 443, 491, 710, 1482, 1676
BstMBI	GATC	7 cut(s)	328, 537, 817, 1090, 1551, 1571, 2077
BstNI	CCWGG	5 cut(s)	404, 621, 1407, 1518, 1734
BstNSI	RCATGY	2 cut(s)	1210, 1238
BstSCI	CCNGG	5 cut(s)	402, 619, 1405, 1516, 1732
BstSFI	CTRYAG	1 cut(s)	2057
BstV1I	GCAGC	7 cut(s)	677, 737, 740, 1222, 1234, 2043, 2071
BstV2I	GAAGAC	2 cut(s)	166, 1764
BstX2I	RGATCY	2 cut(s)	328, 1571
BstXI	CCANNNNNNTGG	1 cut(s)	410
BstYI	RGATCY	2 cut(s)	328, 1571
Bsu36I	CCTNAGG	2 cut(s)	759, 1962
BsuRI	GGCC	9 cut(s)	414, 546, 812, 937, 1023, 1053, 1140, 1420, 1434
BtgZI	GCGATG	1 cut(s)	29
BtrI	CACGTC	1 cut(s)	1762
BtsCI	GGATG	5 cut(s)	281, 294, 496, 1567, 1642
BtsIMutI	CAGTG	5 cut(s)	375, 585, 1265, 1841, 1940
BveI	ACCTGC	2 cut(s)	1078, 1339
Cac8I	GCNNGC	5 cut(s)	1014, 1025, 1278, 1888, 2000
CfoI	GCGC	1 cut(s)	1348
Cfr13I	GGNCC	9 cut(s)	163, 413, 617, 755, 1051, 1139, 1418, 1432, 1520
Csp6I	GTAC	5 cut(s)	239, 484, 1367, 1469, 1765
CspCI	CAANNNNNGTGG	2 cut(s)	306, 341
CviAII	CATG	6 cut(s)	674, 736, 1207, 1235, 1259, 1303
CviQI	GTAC	5 cut(s)	239, 484, 1367, 1469, 1765
DpnI	GATC	7 cut(s)	330, 539, 819, 1092, 1553, 1573, 2079
DpnII	GATC	7 cut(s)	328, 537, 817, 1090, 1551, 1571, 2077
DriI	GACNNNNNGTC	2 cut(s)	1668, 2045
EaeI	YGGCCR	2 cut(s)	544, 810
Eam1104I	CTCTTC	2 cut(s)	489, 690
Eam1105I	GACNNNNNGTC	2 cut(s)	1668, 2045
EarI	CTCTTC	2 cut(s)	489, 690
Ecl136II	GAGCTC	1 cut(s)	746
Eco24I	GRGCYC	1 cut(s)	748
Eco31I	GGTCTC	2 cut(s)	710, 1676
Eco47I	GGWCC	4 cut(s)	163, 617, 755, 1520
Eco53kI	GAGCTC	1 cut(s)	746
Eco57I	CTGAAG	3 cut(s)	509, 1002, 1581
Eco81I	CCTNAGG	2 cut(s)	759, 1962
Eco88I	CYCGRG	3 cut(s)	158, 191, 1578
EcoICRI	GAGCTC	1 cut(s)	746
EcoRI	GAATTC	1 cut(s)	1284
EcoRII	CCWGG	5 cut(s)	402, 619, 1405, 1516, 1732
EcoT38I	GRGCYC	1 cut(s)	748
Esp3I	CGTCTC	1 cut(s)	36
FaeI	CATG	6 cut(s)	677, 739, 1210, 1238, 1262, 1306
FalI	AAGNNNNNCTT	2 cut(s)	1526, 1558
FaqI	GGGAC	2 cut(s)	1506, 1823
FatI	CATG	6 cut(s)	673, 735, 1206, 1234, 1258, 1302
FauI	CCCGC	3 cut(s)	234, 1317, 1714
Fnu4HI	GCNGC	8 cut(s)	547, 666, 726, 729, 1211, 1223, 2057, 2060
FokI	GGATG	5 cut(s)	268, 281, 503, 1574, 1649
FriOI	GRGCYC	1 cut(s)	748
Fsp4HI	GCNGC	8 cut(s)	547, 666, 726, 729, 1211, 1223, 2057, 2060
FspBI	CTAG	8 cut(s)	183, 332, 749, 836, 849, 911, 1094, 1887
GlaI	GCGC	1 cut(s)	1347
GluI	GCNGC	8 cut(s)	547, 666, 726, 729, 1211, 1223, 2057, 2060
GsuI	CTGGAG	1 cut(s)	642
HaeIII	GGCC	9 cut(s)	414, 546, 812, 937, 1023, 1053, 1140, 1420, 1434
HapII	CCGG	1 cut(s)	35
HhaI	GCGC	1 cut(s)	1348
Hin1II	CATG	6 cut(s)	677, 739, 1210, 1238, 1262, 1306
Hin6I	GCGC	1 cut(s)	1346
HinP1I	GCGC	1 cut(s)	1346
HincII	GTYRAC	1 cut(s)	640
HindII	GTYRAC	1 cut(s)	640
HindIII	AAGCTT	2 cut(s)	1014, 2017
HpaII	CCGG	1 cut(s)	35
HphI	GGTGA	5 cut(s)	51, 112, 689, 1059, 2019
Hpy166II	GTNNAC	7 cut(s)	166, 602, 617, 640, 1747, 1765, 1969
Hpy188I	TCNGA	9 cut(s)	305, 877, 1600, 1756, 1771, 1786, 1899, 1953, 2082
Hpy188III	TCNNGA	2 cut(s)	599, 1578
Hpy8I	GTNNAC	7 cut(s)	166, 602, 617, 640, 1747, 1765, 1969
Hpy99I	CGWCG	1 cut(s)	157
HpyAV	CCTTC	3 cut(s)	1431, 1626, 1638
HpyCH4III	ACNGT	5 cut(s)	942, 1269, 1468, 1548, 1903
HpyCH4IV	ACGT	1 cut(s)	1761
HpySE526I	ACGT	1 cut(s)	1761
Hsp92II	CATG	6 cut(s)	677, 739, 1210, 1238, 1262, 1306
HspAI	GCGC	1 cut(s)	1346
Kzo9I	GATC	7 cut(s)	328, 537, 817, 1090, 1551, 1571, 2077
LmnI	GCTCC	7 cut(s)	31, 89, 204, 234, 743, 1647, 1718
Lsp1109I	GCAGC	7 cut(s)	677, 737, 740, 1222, 1234, 2043, 2071
LweI	GCATC	7 cut(s)	186, 361, 1110, 1492, 1552, 1836, 1935
MaeI	CTAG	8 cut(s)	183, 332, 749, 836, 849, 911, 1094, 1887
MaeII	ACGT	1 cut(s)	1761
MaeIII	GTNAC	5 cut(s)	57, 625, 1338, 1395, 2025
MalI	GATC	7 cut(s)	330, 539, 819, 1092, 1553, 1573, 2079
MbiI	CCGCTC	2 cut(s)	229, 1721
MboI	GATC	7 cut(s)	328, 537, 817, 1090, 1551, 1571, 2077
MboII	GAAGA	8 cut(s)	166, 506, 515, 677, 1353, 1566, 1587, 1769
MfeI	CAATTG	2 cut(s)	699, 857
MflI	RGATCY	2 cut(s)	328, 1571
MhlI	GDGCHC	4 cut(s)	94, 514, 748, 1652
MlsI	TGGCCA	1 cut(s)	812
MluNI	TGGCCA	1 cut(s)	812
MlyI	GAGTC	3 cut(s)	856, 862, 1964
MmeI	TCCRAC	5 cut(s)	283, 637, 1313, 1614, 1938
Mox20I	TGGCCA	1 cut(s)	812
MscI	TGGCCA	1 cut(s)	812
MseI	TTAA	8 cut(s)	50, 96, 506, 966, 1608, 1881, 1926, 2015
MslI	CAYNNNNRTG	2 cut(s)	1445, 1458
Msp20I	TGGCCA	1 cut(s)	812
MspA1I	CMGCKG	1 cut(s)	668
MspI	CCGG	1 cut(s)	35
MspR9I	CCNGG	5 cut(s)	404, 621, 1407, 1518, 1734
MunI	CAATTG	2 cut(s)	699, 857
Mva1269I	GAATGC	2 cut(s)	1224, 1700
MvaI	CCWGG	5 cut(s)	404, 621, 1407, 1518, 1734
NdeII	GATC	7 cut(s)	328, 537, 817, 1090, 1551, 1571, 2077
NheI	GCTAGC	1 cut(s)	1886
NlaIII	CATG	6 cut(s)	677, 739, 1210, 1238, 1262, 1306
NlaIV	GGNNCC	5 cut(s)	27, 256, 1062, 1155, 1522
NmeAIII	GCCGAG	1 cut(s)	493
NmuCI	GTSAC	4 cut(s)	57, 625, 1338, 2025
NspI	RCATGY	2 cut(s)	1210, 1238
PaeR7I	CTCGAG	1 cut(s)	1578
PaqCI	CACCTGC	1 cut(s)	1078
PctI	GAATGC	2 cut(s)	1224, 1700
PfeI	GAWTC	9 cut(s)	308, 336, 680, 796, 1592, 1601, 1694, 1954, 2083
PkrI	GCNGC	8 cut(s)	548, 667, 727, 730, 1212, 1224, 2058, 2061
PleI	GAGTC	3 cut(s)	856, 861, 1964
PpsI	GAGTC	3 cut(s)	856, 861, 1964
PshBI	ATTAAT	1 cut(s)	1881
Psp124BI	GAGCTC	1 cut(s)	748
Psp6I	CCWGG	5 cut(s)	402, 619, 1405, 1516, 1732
PspGI	CCWGG	5 cut(s)	402, 619, 1405, 1516, 1732
PspN4I	GGNNCC	5 cut(s)	27, 256, 1062, 1155, 1522
PspPI	GGNCC	9 cut(s)	163, 413, 617, 755, 1051, 1139, 1418, 1432, 1520
PstI	CTGCAG	1 cut(s)	2061
PsuI	RGATCY	2 cut(s)	328, 1571
RsaI	GTAC	5 cut(s)	240, 485, 1368, 1470, 1766
RsaNI	GTAC	5 cut(s)	239, 484, 1367, 1469, 1765
RseI	CAYNNNNRTG	2 cut(s)	1445, 1458
SacI	GAGCTC	1 cut(s)	748
SaqAI	TTAA	8 cut(s)	50, 96, 506, 966, 1608, 1881, 1926, 2015
SatI	GCNGC	8 cut(s)	547, 666, 726, 729, 1211, 1223, 2057, 2060
Sau3AI	GATC	7 cut(s)	328, 537, 817, 1090, 1551, 1571, 2077
Sau96I	GGNCC	9 cut(s)	163, 413, 617, 755, 1051, 1139, 1418, 1432, 1520
SchI	GAGTC	3 cut(s)	856, 862, 1964
ScrFI	CCNGG	5 cut(s)	404, 621, 1407, 1518, 1734
SduI	GDGCHC	4 cut(s)	94, 514, 748, 1652
SfaNI	GCATC	7 cut(s)	186, 361, 1110, 1492, 1552, 1836, 1935
SfcI	CTRYAG	1 cut(s)	2057
Sfr274I	CTCGAG	1 cut(s)	1578
SinI	GGWCC	4 cut(s)	163, 617, 755, 1520
SlaI	CTCGAG	1 cut(s)	1578
SmiMI	CAYNNNNRTG	2 cut(s)	1445, 1458
SmlI	CTYRAG	2 cut(s)	1318, 1578
SmoI	CTYRAG	2 cut(s)	1318, 1578
SsiI	CCGC	9 cut(s)	102, 227, 258, 343, 547, 668, 1310, 1323, 1721
SspI	AATATT	1 cut(s)	361
SspMI	CTAG	8 cut(s)	183, 332, 749, 836, 849, 911, 1094, 1887
SstI	GAGCTC	1 cut(s)	748
StyD4I	CCNGG	5 cut(s)	402, 619, 1405, 1516, 1732
TaaI	ACNGT	5 cut(s)	942, 1269, 1468, 1548, 1903
TaiI	ACGT	1 cut(s)	1764
TaqI	TCGA	6 cut(s)	40, 247, 1195, 1216, 1550, 1579
TaqII	GACCGA	1 cut(s)	1326
TatI	WGTACW	3 cut(s)	483, 1366, 1764
TauI	GCSGC	1 cut(s)	549
TfiI	GAWTC	9 cut(s)	308, 336, 680, 796, 1592, 1601, 1694, 1954, 2083
Tru1I	TTAA	8 cut(s)	50, 96, 506, 966, 1608, 1881, 1926, 2015
Tru9I	TTAA	8 cut(s)	50, 96, 506, 966, 1608, 1881, 1926, 2015
TscAI	CASTG	5 cut(s)	382, 592, 1272, 1848, 1940
TseFI	GTSAC	4 cut(s)	57, 625, 1338, 2025
TseI	GCWGC	7 cut(s)	665, 725, 728, 1210, 1222, 2056, 2059
Tsp45I	GTSAC	4 cut(s)	57, 625, 1338, 2025
TspGWI	ACGGA	2 cut(s)	18, 141
TspRI	CASTG	5 cut(s)	382, 592, 1272, 1848, 1940
VpaK11BI	GGWCC	4 cut(s)	163, 617, 755, 1520
VspI	ATTAAT	1 cut(s)	1881
XapI	RAATTY	3 cut(s)	1162, 1284, 1779
XceI	RCATGY	2 cut(s)	1210, 1238
XhoI	CTCGAG	1 cut(s)	1578
XspI	CTAG	8 cut(s)	183, 332, 749, 836, 849, 911, 1094, 1887

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.