Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0011097

Physical Location & Seq

Genomic Coordinates Reverse (-)

34285831 .. 34291810

Gene Structure 5980 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24527

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGGCCTCTTCTCAGCACCGCTGCGTTTTCGTTGGGAATATTCCTTATGATGCCACTGAGGAACAGCTCATAGAAATCTGCCAGGAGGTTGGCCCTGTTGTATCTTTTAGGTTAGTTATTGATAGAGAGACCGGGAAACCAAAAGGTTATGGATTTTGTGAGTACAAGGATGAAGAGACAGCTTTAAGTGCTCGGCGTAATCTTCAGGGCTACGAGATCAATGGCCGCCAATTACGAGTTGATTTTGCTGAAAATGACAAAGGCACTGACAGGAATCGTGAACAGGGTCGTGGTGGACCTGGAGTGACTGCAAATGTTGACCCTCCAAAGCAAGTTGGAGGTGCAGCGGTTCATGGTGATTCTCTTCATAATCAGCCAATTGGTCTCCATATAGCAATAACTGCAGCAGCCGTCATGGCAGGAGCTCTAGGTGGTCCTCAGGCTGTTTTGCAGTCAAATCAAAATGGTTTGCAGAATCAGTCTGCATTGGCCAATGATCCTTTGACACTTCATCTAGCCAAAATGTCTAGGAGTCAATTGACTCAAATTATCTCGGAGGTCAAAGGAATGGCTATACAAAACAAGGAACTAGCTCATAAGTTATTTGTTGCAAGGCCACAGTTGCCAAAAGCTCTGTTTCAGGCACAAATAATGCTAGGGATGGTGACCCCACAAATGTTGCAGATGGCAAATATCAGGCAAGCTTCAGGCCAGTCCTCACAGCCTCTATTCAATCAGGGCCAACAGGTTCCATCACCTGCTGTTCAAAATCTTGCTGATCTAGCCCCTTCTGCTGAGAATAGGTTGATGCCTAAAATGCAAGATGGCCCATTTTCTGCGGTGCCTCAAAATTTATTGGTTCACAGCCAGTTTTCTGCACCTCGACAACAAAACATGCAGCCTCGAATGCAGCTTTCACAACATGCAAACCACAATGTTTTGCAACATGGCACACTGCTAGGGCAGGCTGGAATTCCAACACTTCCTCCCATGCACCCGCAGTCCTCAAGCGGTTTGTCCATTCGGTCACAAACACAGGTTGCCAATTCTTCCGTACTAAACCAGAAAATGCAACCTCCTTTGTTACAACACCCTGGTCAGGTCGGGCCTTCACATTTGGGCCATAACACTCCAATGGTTCATCAAAATGCTACCGTACAGCAGTCTCCTTTATCTCGTCCTTTTTCCGATGCCATCTTTCAGCCTGGTCCCTCAATATCTAAGGGTGTCTTACAGTCGATCAACAAGGATGCTGATAGATCTTCTCGAGTGGTAGCTGATTCTTCAGAATCAGTTAATCGCCCTTCAAAACTACTGAAGTTGGATGATGGAAGGAGCACCCCTTTGATGACAGGGGGTCTCAATGTGTCAAATGCCAATGAATCTGCATTGCCCAATGTTTATGGAGCGGGATTGTTGCCTGGAAAGCCTGTTCACAAATCAGAAGATATGTACTCTGAGAAACAAATTTCTGAGCCTCAGATTCCACCTGAGGTGGACTCTGCTTTACTGCAACAAGTTTTGAGCCTGCCACCTGAAAAATTAAGCTTGTTGTCACCAGAGCAGCGACAAGAAGTCATTAAGCTGCAGCAGAGATTTCGGCGAGAACAGATTCAGCCATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006355 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016458 GO:0016604 GO:0019219 GO:0019222 GO:0031047 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032502 GO:0032991 GO:0034641 GO:0034660 GO:0040007 GO:0042868 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0048589 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0071920 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0098787 GO:0098789 GO:1901360 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

CSTF2_hinge CSTF_C RRM_1

Protein Analysis

541

Amino Acids

58.63

Weight (kDa)

8.85

Isoelectric Point (pI)

63.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	9 - 79	1.8e-22	RNA recognition motif
CSTF2_hinge	PF14327	161 - 228	5.8e-13	Hinge domain of cleavage stimulation factor subunit 2
CSTF_C	PF14304	502 - 535	6.5e-08	Transcription termination and cleavage factor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71800
fragaria_vesca	FvH4_2g12680 FvH4_2g12680 FvH4_2g12680 FvH4_2g12680
malus_domestica	MD05G1038100.v1.1 MD10G1041800.v1.1
prunus_persica	Prupe.8G045900_v2.0.a1
pyrus_communis	pycom05g02820 pycom10g02890
rosa_chinensis	RchiOBHm_Chr6g0273401
rosa_laevigata	RLG00000013620
rosa_multiflora	Rmu_sc0005891.1_g000012
rosa_roxburghii	Rroxscaffold_7G00195400
rosa_rugosa	Rorug06G0074600
rosa_samantha	Rh6AG189700 Rh6BG193100 Rh6CG192900 Rh6DG184400
rosa_wichuraiana	Rw6G016510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	766
Acc36I	ACCTGC	1 cut(s)	766
AccB1I	GGYRCC	1 cut(s)	841
AccBSI	CCGCTC	1 cut(s)	1409
AciI	CCGC	7 cut(s)	19, 226, 347, 839, 998, 1011, 1409
AclWI	GGATC	1 cut(s)	491
AcoI	YGGCCR	2 cut(s)	223, 489
AcsI	RAATTY	3 cut(s)	850, 972, 1467
AcuI	CTGAAG	4 cut(s)	188, 690, 1269, 1337
AfaI	GTAC	4 cut(s)	164, 1056, 1158, 1454
AfiI	CCNNNNNNNGG	1 cut(s)	1099
AgsI	TTSAA	3 cut(s)	733, 767, 1308
AhdI	GACNNNNNGTC	2 cut(s)	1356, 1574
AjnI	CCWGG	5 cut(s)	81, 298, 1093, 1204, 1420
AloI	GAACNNNNNNTCC	2 cut(s)	1416, 1448
Alw21I	GWGCWC	3 cut(s)	193, 427, 1340
Alw26I	GTCTC	5 cut(s)	122, 170, 389, 1170, 1364
AlwI	GGATC	1 cut(s)	491
Ama87I	CYCGRG	1 cut(s)	1266
ApeKI	GCWGC	9 cut(s)	21, 344, 404, 407, 898, 910, 1564, 1585, 1588
ApoI	RAATTY	3 cut(s)	850, 972, 1467
Asp700I	GAANNNNTTC	1 cut(s)	1611
AspS9I	GGNCC	8 cut(s)	92, 296, 434, 739, 827, 1106, 1120, 1208
AsuC2I	CCSGG	1 cut(s)	133
AsuHPI	GGTGA	4 cut(s)	368, 676, 747, 1548
AvaI	CYCGRG	1 cut(s)	1266
AvaII	GGWCC	3 cut(s)	296, 434, 1208
AxyI	CCTNAGG	2 cut(s)	438, 1491
BalI	TGGCCA	1 cut(s)	491
BanI	GGYRCC	1 cut(s)	841
BanII	GRGCYC	1 cut(s)	427
Bbv12I	GWGCWC	3 cut(s)	193, 427, 1340
BbvI	GCAGC	9 cut(s)	8, 356, 416, 419, 910, 922, 1572, 1576, 1600
BccI	CCATC	6 cut(s)	655, 679, 760, 818, 1202, 1322
BceAI	ACGGC	1 cut(s)	395
BcgI	CGANNNNNNTGC	2 cut(s)	1580, 1614
BciT130I	CCWGG	5 cut(s)	83, 300, 1095, 1206, 1422
BcnI	CCSGG	1 cut(s)	133
BcoDI	GTCTC	5 cut(s)	122, 170, 389, 1170, 1364
BfaI	CTAG	7 cut(s)	428, 515, 528, 590, 656, 782, 959
BfmI	CTRYAG	2 cut(s)	402, 1586
BfuAI	ACCTGC	1 cut(s)	766
BglI	GCCNNNNNGGC	1 cut(s)	416
BglII	AGATCT	1 cut(s)	1259
Bme1390I	CCNGG	6 cut(s)	83, 133, 300, 1095, 1206, 1422
Bme18I	GGWCC	3 cut(s)	296, 434, 1208
BmeRI	GACNNNNNGTC	2 cut(s)	1356, 1574
BmeT110I	CYCGRG	1 cut(s)	1266
BmgT120I	GGNCC	8 cut(s)	92, 296, 434, 739, 827, 1106, 1120, 1208
BmiI	GGNNCC	3 cut(s)	750, 843, 1210
BmrFI	CCNGG	6 cut(s)	83, 133, 300, 1095, 1206, 1422
BmsI	GCATC	4 cut(s)	40, 798, 1180, 1240
BplI	GAGNNNNNCTC	2 cut(s)	1484, 1516
BpmI	CTGGAG	1 cut(s)	321
BpuEI	CTTGAG	1 cut(s)	991
BpuMI	CCSGG	1 cut(s)	133
BsaI	GGTCTC	3 cut(s)	122, 389, 1364
BsaJI	CCNNGG	1 cut(s)	1093
BsaXI	ACNNNNNCTCC	2 cut(s)	970, 1000
Bsc4I	CCNNNNNNNGG	1 cut(s)	1099
Bse1I	ACTGG	2 cut(s)	712, 868
Bse21I	CCTNAGG	2 cut(s)	438, 1491
Bse3DI	GCAATG	1 cut(s)	1388
BseBI	CCWGG	5 cut(s)	83, 300, 1095, 1206, 1422
BseDI	CCNNGG	1 cut(s)	1093
BseGI	GGATG	4 cut(s)	175, 666, 1255, 1330
BseLI	CCNNNNNNNGG	1 cut(s)	1099
BseMI	GCAATG	1 cut(s)	1388
BseMII	CTCAG	8 cut(s)	26, 48, 452, 786, 1449, 1464, 1482, 1493
BseNI	ACTGG	2 cut(s)	712, 868
BseXI	GCAGC	9 cut(s)	8, 356, 416, 419, 910, 922, 1572, 1576, 1600
BsgI	GTGCAG	2 cut(s)	363, 861
BshNI	GGYRCC	1 cut(s)	841
BsiHKAI	GWGCWC	3 cut(s)	193, 427, 1340
BsiHKCI	CYCGRG	1 cut(s)	1266
BsiSI	CCGG	1 cut(s)	132
BslFI	GGGAC	1 cut(s)	1194
BslI	CCNNNNNNNGG	1 cut(s)	1099
BsmAI	GTCTC	5 cut(s)	122, 170, 389, 1170, 1364
BsmFI	GGGAC	1 cut(s)	1194
BsmI	GAATGC	1 cut(s)	912
Bso31I	GGTCTC	3 cut(s)	122, 389, 1364
BsoBI	CYCGRG	1 cut(s)	1266
Bsp1286I	GDGCHC	3 cut(s)	193, 427, 1340
Bsp143I	GATC	5 cut(s)	216, 496, 778, 1239, 1259
BspACI	CCGC	7 cut(s)	19, 226, 347, 839, 998, 1011, 1409
BspCNI	CTCAG	8 cut(s)	25, 49, 451, 787, 1450, 1465, 1483, 1492
BspLI	GGNNCC	3 cut(s)	750, 843, 1210
BspMAI	CTGCAG	2 cut(s)	406, 1590
BspMI	ACCTGC	1 cut(s)	766
BspPI	GGATC	1 cut(s)	491
BspT107I	GGYRCC	1 cut(s)	841
BspTNI	GGTCTC	3 cut(s)	122, 389, 1364
BsrBI	CCGCTC	1 cut(s)	1409
BsrDI	GCAATG	1 cut(s)	1388
BsrI	ACTGG	2 cut(s)	712, 868
BssECI	CCNNGG	1 cut(s)	1093
BssMI	GATC	5 cut(s)	216, 496, 778, 1239, 1259
Bst2UI	CCWGG	5 cut(s)	83, 300, 1095, 1206, 1422
Bst4CI	ACNGT	3 cut(s)	621, 1156, 1236
Bst6I	CTCTTC	3 cut(s)	13, 168, 369
BstAPI	GCANNNNNTGC	1 cut(s)	401
BstC8I	GCNNGC	3 cut(s)	702, 966, 1529
BstEII	GGTNACC	1 cut(s)	664
BstF5I	GGATG	4 cut(s)	175, 666, 1255, 1330
BstKTI	GATC	5 cut(s)	219, 499, 781, 1242, 1262
BstMAI	GTCTC	5 cut(s)	122, 170, 389, 1170, 1364
BstMBI	GATC	5 cut(s)	216, 496, 778, 1239, 1259
BstMWI	GCNNNNNNNGC	9 cut(s)	188, 401, 416, 622, 782, 791, 817, 907, 1426
BstNI	CCWGG	5 cut(s)	83, 300, 1095, 1206, 1422
BstNSI	RCATGY	2 cut(s)	898, 926
BstPI	GGTNACC	1 cut(s)	664
BstSCI	CCNGG	6 cut(s)	81, 131, 298, 1093, 1204, 1420
BstSFI	CTRYAG	2 cut(s)	402, 1586
BstV1I	GCAGC	9 cut(s)	8, 356, 416, 419, 910, 922, 1572, 1576, 1600
BstX2I	RGATCY	1 cut(s)	1259
BstXI	CCANNNNNNTGG	1 cut(s)	89
BstYI	RGATCY	1 cut(s)	1259
Bsu36I	CCTNAGG	2 cut(s)	438, 1491
BtsCI	GGATG	4 cut(s)	175, 666, 1255, 1330
BtsI	GCAGTG	1 cut(s)	953
BtsIMutI	CAGTG	3 cut(s)	54, 264, 953
BveI	ACCTGC	1 cut(s)	766
Cac8I	GCNNGC	3 cut(s)	702, 966, 1529
Cfr13I	GGNCC	8 cut(s)	92, 296, 434, 739, 827, 1106, 1120, 1208
Csp6I	GTAC	4 cut(s)	163, 1055, 1157, 1453
CspCI	CAANNNNNGTGG	2 cut(s)	660, 695
CviAII	CATG	6 cut(s)	353, 415, 895, 923, 947, 991
CviQI	GTAC	4 cut(s)	163, 1055, 1157, 1453
DpnI	GATC	5 cut(s)	218, 498, 780, 1241, 1261
DpnII	GATC	5 cut(s)	216, 496, 778, 1239, 1259
DriI	GACNNNNNGTC	2 cut(s)	1356, 1574
EaeI	YGGCCR	2 cut(s)	223, 489
Eam1104I	CTCTTC	3 cut(s)	13, 168, 369
Eam1105I	GACNNNNNGTC	2 cut(s)	1356, 1574
EarI	CTCTTC	3 cut(s)	13, 168, 369
Ecl136II	GAGCTC	1 cut(s)	425
Eco24I	GRGCYC	1 cut(s)	427
Eco31I	GGTCTC	3 cut(s)	122, 389, 1364
Eco47I	GGWCC	3 cut(s)	296, 434, 1208
Eco53kI	GAGCTC	1 cut(s)	425
Eco57I	CTGAAG	4 cut(s)	188, 690, 1269, 1337
Eco81I	CCTNAGG	2 cut(s)	438, 1491
Eco88I	CYCGRG	1 cut(s)	1266
Eco91I	GGTNACC	1 cut(s)	664
EcoICRI	GAGCTC	1 cut(s)	425
EcoO65I	GGTNACC	1 cut(s)	664
EcoRI	GAATTC	1 cut(s)	972
EcoRII	CCWGG	5 cut(s)	81, 298, 1093, 1204, 1420
EcoT38I	GRGCYC	1 cut(s)	427
FaeI	CATG	6 cut(s)	356, 418, 898, 926, 950, 994
FalI	AAGNNNNNCTT	2 cut(s)	1214, 1246
FaqI	GGGAC	1 cut(s)	1194
FatI	CATG	6 cut(s)	352, 414, 894, 922, 946, 990
FauI	CCCGC	2 cut(s)	1005, 1402
FokI	GGATG	4 cut(s)	182, 673, 1262, 1337
FriOI	GRGCYC	1 cut(s)	427
FspBI	CTAG	7 cut(s)	428, 515, 528, 590, 656, 782, 959
GsuI	CTGGAG	1 cut(s)	321
HapII	CCGG	1 cut(s)	132
Hin1II	CATG	6 cut(s)	356, 418, 898, 926, 950, 994
HincII	GTYRAC	1 cut(s)	319
HindII	GTYRAC	1 cut(s)	319
HindIII	AAGCTT	2 cut(s)	702, 1546
HpaII	CCGG	1 cut(s)	132
HphI	GGTGA	4 cut(s)	368, 676, 747, 1548
Hpy166II	GTNNAC	6 cut(s)	281, 296, 319, 862, 1435, 1498
Hpy188I	TCNGA	7 cut(s)	556, 1189, 1288, 1444, 1459, 1474, 1482
Hpy188III	TCNNGA	2 cut(s)	278, 1266
Hpy8I	GTNNAC	6 cut(s)	281, 296, 319, 862, 1435, 1498
HpyAV	CCTTC	4 cut(s)	798, 1119, 1314, 1326
HpyCH4III	ACNGT	3 cut(s)	621, 1156, 1236
HpyF10VI	GCNNNNNNNGC	9 cut(s)	188, 401, 416, 622, 782, 791, 817, 907, 1426
Hsp92II	CATG	6 cut(s)	356, 418, 898, 926, 950, 994
Kzo9I	GATC	5 cut(s)	216, 496, 778, 1239, 1259
LmnI	GCTCC	3 cut(s)	422, 1335, 1406
Lsp1109I	GCAGC	9 cut(s)	8, 356, 416, 419, 910, 922, 1572, 1576, 1600
LweI	GCATC	4 cut(s)	40, 798, 1180, 1240
MaeI	CTAG	7 cut(s)	428, 515, 528, 590, 656, 782, 959
MaeIII	GTNAC	5 cut(s)	304, 664, 1026, 1083, 1554
MalI	GATC	5 cut(s)	218, 498, 780, 1241, 1261
MbiI	CCGCTC	1 cut(s)	1409
MboI	GATC	5 cut(s)	216, 496, 778, 1239, 1259
MboII	GAAGA	7 cut(s)	185, 194, 356, 1041, 1254, 1275, 1457
MfeI	CAATTG	2 cut(s)	378, 536
MflI	RGATCY	1 cut(s)	1259
MhlI	GDGCHC	3 cut(s)	193, 427, 1340
MlsI	TGGCCA	1 cut(s)	491
MluCI	AATT	9 cut(s)	230, 378, 536, 546, 850, 972, 1045, 1467, 1541
MluNI	TGGCCA	1 cut(s)	491
MlyI	GAGTC	3 cut(s)	535, 541, 1493
MmeI	TCCRAC	3 cut(s)	316, 1001, 1302
Mox20I	TGGCCA	1 cut(s)	491
MroXI	GAANNNNTTC	1 cut(s)	1611
MscI	TGGCCA	1 cut(s)	491
MseI	TTAA	4 cut(s)	185, 1296, 1544, 1581
MslI	CAYNNNNRTG	2 cut(s)	1133, 1146
Msp20I	TGGCCA	1 cut(s)	491
MspA1I	CMGCKG	2 cut(s)	21, 347
MspI	CCGG	1 cut(s)	132
MspR9I	CCNGG	6 cut(s)	83, 133, 300, 1095, 1206, 1422
MunI	CAATTG	2 cut(s)	378, 536
Mva1269I	GAATGC	1 cut(s)	912
MvaI	CCWGG	5 cut(s)	83, 300, 1095, 1206, 1422
MwoI	GCNNNNNNNGC	9 cut(s)	188, 401, 416, 622, 782, 791, 817, 907, 1426
NciI	CCSGG	1 cut(s)	133
NdeII	GATC	5 cut(s)	216, 496, 778, 1239, 1259
NlaIII	CATG	6 cut(s)	356, 418, 898, 926, 950, 994
NlaIV	GGNNCC	3 cut(s)	750, 843, 1210
NmeAIII	GCCGAG	1 cut(s)	172
NmuCI	GTSAC	4 cut(s)	304, 664, 1026, 1554
NspI	RCATGY	2 cut(s)	898, 926
PaeR7I	CTCGAG	1 cut(s)	1266
PaqCI	CACCTGC	1 cut(s)	766
PctI	GAATGC	1 cut(s)	912
PdmI	GAANNNNTTC	1 cut(s)	1611
PfeI	GAWTC	8 cut(s)	274, 359, 475, 1280, 1289, 1382, 1483, 1612
PleI	GAGTC	3 cut(s)	535, 540, 1493
PpsI	GAGTC	3 cut(s)	535, 540, 1493
Psp124BI	GAGCTC	1 cut(s)	427
Psp6I	CCWGG	5 cut(s)	81, 298, 1093, 1204, 1420
PspEI	GGTNACC	1 cut(s)	664
PspGI	CCWGG	5 cut(s)	81, 298, 1093, 1204, 1420
PspN4I	GGNNCC	3 cut(s)	750, 843, 1210
PspPI	GGNCC	8 cut(s)	92, 296, 434, 739, 827, 1106, 1120, 1208
PstI	CTGCAG	2 cut(s)	406, 1590
PsuI	RGATCY	1 cut(s)	1259
RsaI	GTAC	4 cut(s)	164, 1056, 1158, 1454
RsaNI	GTAC	4 cut(s)	163, 1055, 1157, 1453
RseI	CAYNNNNRTG	2 cut(s)	1133, 1146
SacI	GAGCTC	1 cut(s)	427
SaqAI	TTAA	4 cut(s)	185, 1296, 1544, 1581
Sau3AI	GATC	5 cut(s)	216, 496, 778, 1239, 1259
Sau96I	GGNCC	8 cut(s)	92, 296, 434, 739, 827, 1106, 1120, 1208
SchI	GAGTC	3 cut(s)	535, 541, 1493
ScrFI	CCNGG	6 cut(s)	83, 133, 300, 1095, 1206, 1422
SduI	GDGCHC	3 cut(s)	193, 427, 1340
SfaNI	GCATC	4 cut(s)	40, 798, 1180, 1240
SfcI	CTRYAG	2 cut(s)	402, 1586
Sfr274I	CTCGAG	1 cut(s)	1266
SinI	GGWCC	3 cut(s)	296, 434, 1208
SlaI	CTCGAG	1 cut(s)	1266
SmiMI	CAYNNNNRTG	2 cut(s)	1133, 1146
SmlI	CTYRAG	2 cut(s)	1006, 1266
SmoI	CTYRAG	2 cut(s)	1006, 1266
Sse9I	AATT	9 cut(s)	230, 378, 536, 546, 850, 972, 1045, 1467, 1541
SsiI	CCGC	7 cut(s)	19, 226, 347, 839, 998, 1011, 1409
SspI	AATATT	1 cut(s)	40
SspMI	CTAG	7 cut(s)	428, 515, 528, 590, 656, 782, 959
SstI	GAGCTC	1 cut(s)	427
StyD4I	CCNGG	6 cut(s)	81, 131, 298, 1093, 1204, 1420
TaaI	ACNGT	3 cut(s)	621, 1156, 1236
TaqI	TCGA	4 cut(s)	883, 904, 1238, 1267
TaqII	GACCGA	1 cut(s)	1014
TasI	AATT	9 cut(s)	230, 378, 536, 546, 850, 972, 1045, 1467, 1541
TatI	WGTACW	2 cut(s)	162, 1452
TauI	GCSGC	1 cut(s)	228
TfiI	GAWTC	8 cut(s)	274, 359, 475, 1280, 1289, 1382, 1483, 1612
Tru1I	TTAA	4 cut(s)	185, 1296, 1544, 1581
Tru9I	TTAA	4 cut(s)	185, 1296, 1544, 1581
TscAI	CASTG	3 cut(s)	61, 271, 960
TseFI	GTSAC	4 cut(s)	304, 664, 1026, 1554
TseI	GCWGC	9 cut(s)	21, 344, 404, 407, 898, 910, 1564, 1585, 1588
Tsp45I	GTSAC	4 cut(s)	304, 664, 1026, 1554
TspDTI	ATGAA	6 cut(s)	186, 341, 356, 500, 1130, 1395
TspGWI	ACGGA	1 cut(s)	1042
TspRI	CASTG	3 cut(s)	61, 271, 960
VpaK11BI	GGWCC	3 cut(s)	296, 434, 1208
XapI	RAATTY	3 cut(s)	850, 972, 1467
XceI	RCATGY	2 cut(s)	898, 926
XhoI	CTCGAG	1 cut(s)	1266
XmnI	GAANNNNTTC	1 cut(s)	1611
XspI	CTAG	7 cut(s)	428, 515, 528, 590, 656, 782, 959

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.