Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0011097

Physical Location & Seq

Genomic Coordinates Forward (+)

5413013 .. 5419229

Gene Structure 6217 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1041800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGCCGCTTCTCAGCACCGCTGCGTTTTTGTGGGGAATATACCTTATGATGCCACTGAGGAACAGCTTGTAGAAATCTGCCAGGAGGTTGGTCCTGTTGTATCTTTCAGACTAGTTATTGATAGAGAGACTGGAAAACCAAAGGGTTACGGGTTTTGTGAGTACAAGGATGAGGAGACTGCTCTAAGTGCTCGTCGTAATCTTCAGGGTTATGAGATCAATGGCAGGCAATTACGAGTGGATTTTGCTGAAAATGACAAAGGCACTGATAGAAGTCGAGATCAGGGTCGTGGTGGACCAGGACTGACTGCTAATGTTGACCCTCAAAAGCAAGGAGGGGGGCCATCTGTTCATGCAGAATCTCTTCAACATCAGCCAATTGGTCTTCATATAGCTATTACTGCAGCTACTGCCATGGCAGGAGCTCTAGGTGGTGCTCAGTCTGGTTTGCAGAATCAATTGGTATCACCAAATGATCCTTTGACACTTCATCTGGCCAAAATGTCTAGGGGTCAGCTGAATCAAATTATGTCAGAGCTCAAGGTAATTGCTACACAAAACAAAGAGCTAGCTCGTCAACTATTGCTTGCAAGGCCACAGTTGCCAAAAGCCCTCTTCCAGGCACAAATAATGCTCGGAATGGTGAGCCCACAAATGTTGCAGATGCCAAATATCAGGCAAGCTTCAGGTCATACCTCACAGCCTCCATTCAACGAGGCCCAGCAGGCTCAGTCACCTGCACTTCAAACCCACGCTGAGTTGCCCCCTCCTGCAACTAATAAGTTGCAGTCTGGGTTGGTGCCCAATGTGCAAGAAGGCCAATTTGCAGCTGCACCTCAAAATCCATTGGGTAGAAGCCAGTTTTCTGCACCCCAACAGCAACCCATGCAGCCTCGAATGCAGCTTCCACAACATGTAAACCACCACTTTTTGCAACAGGCCCCATTGCTGGGGCAATCTGGAGTTCCAACATTTCCTCCCATACACCCTCAGTCTTCAAGTGGTTTGTCCTTTCGACCCCAAACTCAGCTTATGAATTCTTCTAGTTCAAACCAGAAAATGCAGCCTCCTCTGATACAGCATCCGGGTCAGGTTGGACGTGCCAACTTTGGGCATAACACTCGGATGGTTAATCCAATTGCTACCGTACAGCATTCTTCTTTACCTCGTCCTCTATCTGAAGCCAGCTTTCAGCCTGGTCCCTCAATGTCTTCGGGAATCTCACAGGCAATCAACAAGGATGCTGGTAGATCTTTTCAAGCGGTTAACGATTCAGTAGAATCAGTTAAGCGCCCTTCAAAGCTAATGAAATTGGATGATGGAAGTAGTAGCACTTTGTCAAAAGTGGGTCTTAATGTGCCTCTTGCCAATGGATCCGTATTGCCCCATGCTTTGCCTGCGAAGCCTGTTCATAAGTCAGAAGAAGTACAGCGCTCTGAGAAACAGATTTCTCAGTCTCAGCTTCCACCTGGAGTAGAGTCTGCTCTACTACAACAAGTTTTGAGCTTAACACCTGAAAAACTGAGTTCATTGTCTCCGGAACAGCAACAAGAAGTAATAAAGCTCCAACAGATGCTTCGGCGAGATCAGATTCAGCCATCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006355 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016458 GO:0016604 GO:0019219 GO:0019222 GO:0031047 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032502 GO:0032991 GO:0034641 GO:0034660 GO:0040007 GO:0042868 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0048589 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0071920 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0098787 GO:0098789 GO:1901360 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

CSTF2_hinge CSTF_C RRM_1

Protein Analysis

535

Amino Acids

57.8

Weight (kDa)

9.28

Isoelectric Point (pI)

69.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	9 - 79	3.6e-23	RNA recognition motif
CSTF2_hinge	PF14327	155 - 221	1.2e-12	Hinge domain of cleavage stimulation factor subunit 2
CSTF_C	PF14304	495 - 528	1.7e-06	Transcription termination and cleavage factor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71800
fragaria_vesca	FvH4_2g12680 FvH4_2g12680 FvH4_2g12680 FvH4_2g12680
malus_domestica	MD05G1038100.v1.1 MD10G1041800.v1.1
prunus_persica	Prupe.8G045900_v2.0.a1
pyrus_communis	pycom05g02820 pycom10g02890
rosa_chinensis	RchiOBHm_Chr6g0273401
rosa_laevigata	RLG00000013620
rosa_multiflora	Rmu_sc0005891.1_g000012
rosa_roxburghii	Rroxscaffold_7G00195400
rosa_rugosa	Rorug06G0074600
rosa_samantha	Rh6AG189700 Rh6BG193100 Rh6CG192900 Rh6DG184400
rosa_wichuraiana	Rw6G016510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	745
Acc36I	ACCTGC	1 cut(s)	745
AccB1I	GGYRCC	1 cut(s)	799
AccIII	TCCGGA	1 cut(s)	1537
AciI	CCGC	3 cut(s)	6, 19, 1262
AclWI	GGATC	3 cut(s)	470, 1368, 1381
AcoI	YGGCCR	2 cut(s)	3, 495
AcsI	RAATTY	1 cut(s)	1036
AcuI	CTGAAG	3 cut(s)	188, 669, 1200
AfaI	GTAC	3 cut(s)	164, 1149, 1428
AfeI	AGCGCT	1 cut(s)	1433
AfiI	CCNNNNNNNGG	4 cut(s)	619, 949, 950, 1110
AflIII	ACRYGT	1 cut(s)	913
AgsI	TTSAA	7 cut(s)	368, 712, 746, 999, 1050, 1259, 1299
AhlI	ACTAGT	1 cut(s)	112
AjiI	CACGTC	1 cut(s)	1100
AjnI	CCWGG	5 cut(s)	81, 298, 618, 1195, 1468
AjuI	GAANNNNNNNTTGG	2 cut(s)	1560, 1592
Alw21I	GWGCWC	4 cut(s)	193, 427, 439, 540
Alw26I	GTCTC	4 cut(s)	122, 170, 1461, 1539
AlwI	GGATC	3 cut(s)	470, 1368, 1381
AlwNI	CAGNNNCTG	1 cut(s)	410
Aor13HI	TCCGGA	1 cut(s)	1537
Aor51HI	AGCGCT	1 cut(s)	1433
AoxI	GGCC	7 cut(s)	3, 341, 495, 593, 717, 817, 939
ApeKI	GCWGC	7 cut(s)	21, 404, 827, 830, 889, 901, 1063
ApoI	RAATTY	1 cut(s)	1036
Asp700I	GAANNNNTTC	1 cut(s)	363
AspLEI	GCGC	2 cut(s)	1293, 1434
AspS9I	GGNCC	6 cut(s)	92, 296, 341, 718, 940, 1199
AsuC2I	CCSGG	1 cut(s)	1086
AsuHPI	GGTGA	3 cut(s)	459, 655, 726
AsuNHI	GCTAGC	1 cut(s)	568
AvaII	GGWCC	3 cut(s)	92, 296, 1199
BaeGI	GKGCMC	1 cut(s)	804
BalI	TGGCCA	1 cut(s)	497
BamHI	GGATCC	1 cut(s)	1373
BanI	GGYRCC	1 cut(s)	799
BanII	GRGCYC	3 cut(s)	427, 540, 650
BbsI	GAAGAC	3 cut(s)	377, 987, 1203
Bbv12I	GWGCWC	4 cut(s)	193, 427, 439, 540
BbvI	GCAGC	7 cut(s)	8, 416, 817, 839, 901, 913, 1075
BccI	CCATC	3 cut(s)	352, 1120, 1313
BcgI	CGANNNNNNTGC	2 cut(s)	1103, 1137
BciT130I	CCWGG	5 cut(s)	83, 300, 620, 1197, 1470
BcnI	CCSGG	1 cut(s)	1086
BcoDI	GTCTC	4 cut(s)	122, 170, 1461, 1539
BcuI	ACTAGT	1 cut(s)	112
BfaI	CTAG	5 cut(s)	113, 428, 507, 569, 1044
BfmI	CTRYAG	1 cut(s)	402
BfoI	RGCGCY	2 cut(s)	1294, 1435
BfuAI	ACCTGC	1 cut(s)	745
BglI	GCCNNNNNGGC	1 cut(s)	725
BglII	AGATCT	1 cut(s)	1250
BisI	GCNGC	8 cut(s)	6, 22, 405, 828, 831, 890, 902, 1064
BlsI	GCNGC	8 cut(s)	7, 23, 406, 829, 832, 891, 903, 1065
Bme1390I	CCNGG	6 cut(s)	83, 300, 620, 1086, 1197, 1470
Bme18I	GGWCC	3 cut(s)	92, 296, 1199
BmgBI	CACGTC	1 cut(s)	1100
BmgT120I	GGNCC	6 cut(s)	92, 296, 341, 718, 940, 1199
BmiI	GGNNCC	5 cut(s)	342, 801, 942, 1201, 1375
BmrFI	CCNGG	6 cut(s)	83, 300, 620, 1086, 1197, 1470
BmsI	GCATC	5 cut(s)	40, 654, 1090, 1231, 1563
BmtI	GCTAGC	1 cut(s)	572
BpiI	GAAGAC	3 cut(s)	377, 987, 1203
BpmI	CTGGAG	2 cut(s)	981, 1491
BpuEI	CTTGAG	1 cut(s)	524
BpuMI	CCSGG	1 cut(s)	1086
BsaJI	CCNNGG	1 cut(s)	414
BsaWI	WCCGGW	1 cut(s)	1537
BsaXI	ACNNNNNCTCC	2 cut(s)	961, 991
Bsc4I	CCNNNNNNNGG	4 cut(s)	619, 949, 950, 1110
Bse1I	ACTGG	2 cut(s)	136, 859
Bse3DI	GCAATG	1 cut(s)	944
BseAI	TCCGGA	1 cut(s)	1537
BseBI	CCWGG	5 cut(s)	83, 300, 620, 1197, 1470
BseDI	CCNNGG	1 cut(s)	414
BseGI	GGATG	5 cut(s)	175, 1081, 1131, 1246, 1321
BseLI	CCNNNNNNNGG	4 cut(s)	619, 949, 950, 1110
BseMI	GCAATG	1 cut(s)	944
BseNI	ACTGG	2 cut(s)	136, 859
BseRI	GAGGAG	2 cut(s)	188, 1059
BseSI	GKGCMC	1 cut(s)	804
BseXI	GCAGC	7 cut(s)	8, 416, 817, 839, 901, 913, 1075
BseYI	CCCAGC	2 cut(s)	720, 949
BsgI	GTGCAG	3 cut(s)	723, 816, 852
BshFI	GGCC	7 cut(s)	5, 343, 497, 595, 719, 819, 941
BshNI	GGYRCC	1 cut(s)	799
BsiHKAI	GWGCWC	4 cut(s)	193, 427, 439, 540
BsiSI	CCGG	2 cut(s)	1085, 1538
BslFI	GGGAC	1 cut(s)	1185
BslI	CCNNNNNNNGG	4 cut(s)	619, 949, 950, 1110
BsmAI	GTCTC	4 cut(s)	122, 170, 1461, 1539
BsmFI	GGGAC	1 cut(s)	1185
BsmI	GAATGC	2 cut(s)	903, 1153
BsnI	GGCC	7 cut(s)	5, 343, 497, 595, 719, 819, 941
Bsp1286I	GDGCHC	6 cut(s)	193, 427, 439, 540, 650, 804
Bsp13I	TCCGGA	1 cut(s)	1537
Bsp143I	GATC	6 cut(s)	216, 280, 475, 1250, 1373, 1585
Bsp19I	CCATGG	1 cut(s)	414
BspACI	CCGC	3 cut(s)	6, 19, 1262
BspANI	GGCC	7 cut(s)	5, 343, 497, 595, 719, 819, 941
BspEI	TCCGGA	1 cut(s)	1537
BspLI	GGNNCC	5 cut(s)	342, 801, 942, 1201, 1375
BspMAI	CTGCAG	1 cut(s)	406
BspMI	ACCTGC	1 cut(s)	745
BspOI	GCTAGC	1 cut(s)	572
BspPI	GGATC	3 cut(s)	470, 1368, 1381
BspT107I	GGYRCC	1 cut(s)	799
BsrDI	GCAATG	1 cut(s)	944
BsrI	ACTGG	2 cut(s)	136, 859
BssECI	CCNNGG	1 cut(s)	414
BssMI	GATC	6 cut(s)	216, 280, 475, 1250, 1373, 1585
BssT1I	CCWWGG	1 cut(s)	414
Bst2UI	CCWGG	5 cut(s)	83, 300, 620, 1197, 1470
Bst4CI	ACNGT	2 cut(s)	600, 1147
Bst6I	CTCTTC	2 cut(s)	369, 620
BstAPI	GCANNNNNTGC	2 cut(s)	410, 886
BstC8I	GCNNGC	7 cut(s)	227, 570, 588, 681, 726, 1186, 1398
BstDSI	CCRYGG	1 cut(s)	414
BstENI	CCTNNNNNAGG	1 cut(s)	617
BstF5I	GGATG	5 cut(s)	175, 1081, 1131, 1246, 1321
BstH2I	RGCGCY	2 cut(s)	1294, 1435
BstHHI	GCGC	2 cut(s)	1293, 1434
BstKTI	GATC	6 cut(s)	219, 283, 478, 1253, 1376, 1588
BstMAI	GTCTC	4 cut(s)	122, 170, 1461, 1539
BstMBI	GATC	6 cut(s)	216, 280, 475, 1250, 1373, 1585
BstNI	CCWGG	5 cut(s)	83, 300, 620, 1197, 1470
BstNSI	RCATGY	1 cut(s)	917
BstSCI	CCNGG	6 cut(s)	81, 298, 618, 1084, 1195, 1468
BstSFI	CTRYAG	1 cut(s)	402
BstSLI	GKGCMC	1 cut(s)	804
BstV1I	GCAGC	7 cut(s)	8, 416, 817, 839, 901, 913, 1075
BstV2I	GAAGAC	3 cut(s)	377, 987, 1203
BstX2I	RGATCY	2 cut(s)	1250, 1373
BstXI	CCANNNNNNTGG	1 cut(s)	89
BstYI	RGATCY	2 cut(s)	1250, 1373
BsuRI	GGCC	7 cut(s)	5, 343, 497, 595, 719, 819, 941
BtgI	CCRYGG	1 cut(s)	414
BtrI	CACGTC	1 cut(s)	1100
BtsCI	GGATG	5 cut(s)	175, 1081, 1131, 1246, 1321
BtsIMutI	CAGTG	2 cut(s)	54, 264
BveI	ACCTGC	1 cut(s)	745
Cac8I	GCNNGC	7 cut(s)	227, 570, 588, 681, 726, 1186, 1398
CaiI	CAGNNNCTG	1 cut(s)	410
CfoI	GCGC	2 cut(s)	1293, 1434
Cfr13I	GGNCC	6 cut(s)	92, 296, 341, 718, 940, 1199
Csp6I	GTAC	3 cut(s)	163, 1148, 1427
CspCI	CAANNNNNGTGG	2 cut(s)	639, 674
CviAII	CATG	5 cut(s)	353, 415, 886, 914, 1388
CviQI	GTAC	3 cut(s)	163, 1148, 1427
DpnI	GATC	6 cut(s)	218, 282, 477, 1252, 1375, 1587
DpnII	GATC	6 cut(s)	216, 280, 475, 1250, 1373, 1585
EaeI	YGGCCR	2 cut(s)	3, 495
Eam1104I	CTCTTC	2 cut(s)	369, 620
EarI	CTCTTC	2 cut(s)	369, 620
Ecl136II	GAGCTC	2 cut(s)	425, 538
Eco130I	CCWWGG	1 cut(s)	414
Eco24I	GRGCYC	3 cut(s)	427, 540, 650
Eco47I	GGWCC	3 cut(s)	92, 296, 1199
Eco47III	AGCGCT	1 cut(s)	1433
Eco53kI	GAGCTC	2 cut(s)	425, 538
Eco57I	CTGAAG	3 cut(s)	188, 669, 1200
EcoICRI	GAGCTC	2 cut(s)	425, 538
EcoNI	CCTNNNNNAGG	1 cut(s)	617
EcoO109I	RGGNCCY	1 cut(s)	940
EcoRI	GAATTC	1 cut(s)	1036
EcoRII	CCWGG	5 cut(s)	81, 298, 618, 1195, 1468
EcoT14I	CCWWGG	1 cut(s)	414
EcoT38I	GRGCYC	3 cut(s)	427, 540, 650
ErhI	CCWWGG	1 cut(s)	414
FaeI	CATG	5 cut(s)	356, 418, 889, 917, 1391
FalI	AAGNNNNNCTT	2 cut(s)	1335, 1367
FaqI	GGGAC	1 cut(s)	1185
FatI	CATG	5 cut(s)	352, 414, 885, 913, 1387
Fnu4HI	GCNGC	8 cut(s)	6, 22, 405, 828, 831, 890, 902, 1064
FokI	GGATG	5 cut(s)	182, 1068, 1138, 1253, 1328
FriOI	GRGCYC	3 cut(s)	427, 540, 650
Fsp4HI	GCNGC	8 cut(s)	6, 22, 405, 828, 831, 890, 902, 1064
FspBI	CTAG	5 cut(s)	113, 428, 507, 569, 1044
GlaI	GCGC	2 cut(s)	1292, 1433
GluI	GCNGC	8 cut(s)	6, 22, 405, 828, 831, 890, 902, 1064
GsaI	CCCAGC	2 cut(s)	724, 953
GsuI	CTGGAG	2 cut(s)	981, 1491
HaeII	RGCGCY	2 cut(s)	1294, 1435
HaeIII	GGCC	7 cut(s)	5, 343, 497, 595, 719, 819, 941
HapII	CCGG	2 cut(s)	1085, 1538
HhaI	GCGC	2 cut(s)	1293, 1434
Hin1II	CATG	5 cut(s)	356, 418, 889, 917, 1391
Hin6I	GCGC	2 cut(s)	1291, 1432
HinP1I	GCGC	2 cut(s)	1291, 1432
HincII	GTYRAC	3 cut(s)	319, 578, 1267
HindII	GTYRAC	3 cut(s)	319, 578, 1267
HindIII	AAGCTT	1 cut(s)	681
HinfI	GANTC	8 cut(s)	359, 454, 520, 1218, 1271, 1280, 1478, 1591
HpaI	GTTAAC	1 cut(s)	1267
HpaII	CCGG	2 cut(s)	1085, 1538
HphI	GGTGA	3 cut(s)	459, 655, 726
Hpy166II	GTNNAC	5 cut(s)	296, 319, 578, 919, 1267
Hpy188I	TCNGA	9 cut(s)	110, 535, 638, 1074, 1125, 1180, 1420, 1438, 1590
Hpy188III	TCNNGA	4 cut(s)	278, 960, 1215, 1538
Hpy8I	GTNNAC	5 cut(s)	296, 319, 578, 919, 1267
Hpy99I	CGWCG	1 cut(s)	198
HpyAV	CCTTC	2 cut(s)	809, 1305
HpyCH4III	ACNGT	2 cut(s)	600, 1147
HpyCH4IV	ACGT	1 cut(s)	1099
HpySE526I	ACGT	1 cut(s)	1099
Hsp92II	CATG	5 cut(s)	356, 418, 889, 917, 1391
HspAI	GCGC	2 cut(s)	1291, 1432
Kpn2I	TCCGGA	1 cut(s)	1537
KspAI	GTTAAC	1 cut(s)	1267
Kzo9I	GATC	6 cut(s)	216, 280, 475, 1250, 1373, 1585
LmnI	GCTCC	2 cut(s)	422, 1569
Lsp1109I	GCAGC	7 cut(s)	8, 416, 817, 839, 901, 913, 1075
LweI	GCATC	5 cut(s)	40, 654, 1090, 1231, 1563
MaeI	CTAG	5 cut(s)	113, 428, 507, 569, 1044
MaeII	ACGT	1 cut(s)	1099
MaeIII	GTNAC	2 cut(s)	146, 732
MalI	GATC	6 cut(s)	218, 282, 477, 1252, 1375, 1587
MboI	GATC	6 cut(s)	216, 280, 475, 1250, 1373, 1585
MboII	GAAGA	9 cut(s)	194, 356, 377, 607, 987, 1032, 1149, 1203, 1433
MfeI	CAATTG	3 cut(s)	378, 458, 1137
MflI	RGATCY	2 cut(s)	1250, 1373
MhlI	GDGCHC	6 cut(s)	193, 427, 439, 540, 650, 804
MlsI	TGGCCA	1 cut(s)	497
MluCI	AATT	9 cut(s)	230, 378, 458, 525, 546, 821, 1036, 1137, 1310
MluNI	TGGCCA	1 cut(s)	497
MlyI	GAGTC	1 cut(s)	1487
MmeI	TCCRAC	3 cut(s)	992, 1075, 1591
Mox20I	TGGCCA	1 cut(s)	497
MroI	TCCGGA	1 cut(s)	1537
MroXI	GAANNNNTTC	1 cut(s)	363
MscI	TGGCCA	1 cut(s)	497
MseI	TTAA	5 cut(s)	1131, 1266, 1287, 1353, 1508
MslI	CAYNNNNRTG	1 cut(s)	1124
Msp20I	TGGCCA	1 cut(s)	497
MspA1I	CMGCKG	3 cut(s)	21, 517, 830
MspI	CCGG	2 cut(s)	1085, 1538
MspR9I	CCNGG	6 cut(s)	83, 300, 620, 1086, 1197, 1470
MunI	CAATTG	3 cut(s)	378, 458, 1137
Mva1269I	GAATGC	2 cut(s)	903, 1153
MvaI	CCWGG	5 cut(s)	83, 300, 620, 1197, 1470
NciI	CCSGG	1 cut(s)	1086
NcoI	CCATGG	1 cut(s)	414
NdeII	GATC	6 cut(s)	216, 280, 475, 1250, 1373, 1585
NheI	GCTAGC	1 cut(s)	568
NlaIII	CATG	5 cut(s)	356, 418, 889, 917, 1391
NlaIV	GGNNCC	5 cut(s)	342, 801, 942, 1201, 1375
NmuCI	GTSAC	1 cut(s)	732
NspI	RCATGY	1 cut(s)	917
PaqCI	CACCTGC	1 cut(s)	745
PciI	ACATGT	1 cut(s)	913
PctI	GAATGC	2 cut(s)	903, 1153
PdmI	GAANNNNTTC	1 cut(s)	363
PfeI	GAWTC	7 cut(s)	359, 454, 520, 1218, 1271, 1280, 1591
PkrI	GCNGC	8 cut(s)	7, 23, 406, 829, 832, 891, 903, 1065
PleI	GAGTC	1 cut(s)	1486
PpsI	GAGTC	1 cut(s)	1486
PscI	ACATGT	1 cut(s)	913
Psp124BI	GAGCTC	2 cut(s)	427, 540
Psp6I	CCWGG	5 cut(s)	81, 298, 618, 1195, 1468
PspFI	CCCAGC	2 cut(s)	720, 949
PspGI	CCWGG	5 cut(s)	81, 298, 618, 1195, 1468
PspN4I	GGNNCC	5 cut(s)	342, 801, 942, 1201, 1375
PspPI	GGNCC	6 cut(s)	92, 296, 341, 718, 940, 1199
PstI	CTGCAG	1 cut(s)	406
PstNI	CAGNNNCTG	1 cut(s)	410
PsuI	RGATCY	2 cut(s)	1250, 1373
PvuII	CAGCTG	2 cut(s)	517, 830
RsaI	GTAC	3 cut(s)	164, 1149, 1428
RsaNI	GTAC	3 cut(s)	163, 1148, 1427
RseI	CAYNNNNRTG	1 cut(s)	1124
SacI	GAGCTC	2 cut(s)	427, 540
SaqAI	TTAA	5 cut(s)	1131, 1266, 1287, 1353, 1508
SatI	GCNGC	8 cut(s)	6, 22, 405, 828, 831, 890, 902, 1064
Sau3AI	GATC	6 cut(s)	216, 280, 475, 1250, 1373, 1585
Sau96I	GGNCC	6 cut(s)	92, 296, 341, 718, 940, 1199
SchI	GAGTC	1 cut(s)	1487
ScrFI	CCNGG	6 cut(s)	83, 300, 620, 1086, 1197, 1470
SduI	GDGCHC	6 cut(s)	193, 427, 439, 540, 650, 804
SfaNI	GCATC	5 cut(s)	40, 654, 1090, 1231, 1563
SfcI	CTRYAG	1 cut(s)	402
SinI	GGWCC	3 cut(s)	92, 296, 1199
SmiMI	CAYNNNNRTG	1 cut(s)	1124
SmlI	CTYRAG	1 cut(s)	539
SmoI	CTYRAG	1 cut(s)	539
SpeI	ACTAGT	1 cut(s)	112
Sse9I	AATT	9 cut(s)	230, 378, 458, 525, 546, 821, 1036, 1137, 1310
SsiI	CCGC	3 cut(s)	6, 19, 1262
SspMI	CTAG	5 cut(s)	113, 428, 507, 569, 1044
SstI	GAGCTC	2 cut(s)	427, 540
StyD4I	CCNGG	6 cut(s)	81, 298, 618, 1084, 1195, 1468
StyI	CCWWGG	1 cut(s)	414
TaaI	ACNGT	2 cut(s)	600, 1147
TaiI	ACGT	1 cut(s)	1102
TaqI	TCGA	3 cut(s)	277, 895, 1015
TasI	AATT	9 cut(s)	230, 378, 458, 525, 546, 821, 1036, 1137, 1310
TatI	WGTACW	2 cut(s)	162, 1426
TauI	GCSGC	1 cut(s)	8
TfiI	GAWTC	7 cut(s)	359, 454, 520, 1218, 1271, 1280, 1591
Tru1I	TTAA	5 cut(s)	1131, 1266, 1287, 1353, 1508
Tru9I	TTAA	5 cut(s)	1131, 1266, 1287, 1353, 1508
TscAI	CASTG	2 cut(s)	61, 271
TseFI	GTSAC	1 cut(s)	732
TseI	GCWGC	7 cut(s)	21, 404, 827, 830, 889, 901, 1063
Tsp45I	GTSAC	1 cut(s)	732
TspDTI	ATGAA	7 cut(s)	341, 377, 479, 1049, 1322, 1400, 1518
TspGWI	ACGGA	1 cut(s)	1366
TspRI	CASTG	2 cut(s)	61, 271
VpaK11BI	GGWCC	3 cut(s)	92, 296, 1199
XagI	CCTNNNNNAGG	1 cut(s)	617
XapI	RAATTY	1 cut(s)	1036
XceI	RCATGY	1 cut(s)	917
XmnI	GAANNNNTTC	1 cut(s)	363
XspI	CTAG	5 cut(s)	113, 428, 507, 569, 1044

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.