Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0011097

Physical Location & Seq

Genomic Coordinates Forward (+)

6052440 .. 6059310

Gene Structure 6871 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1038100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGGCCGCTTCTCAGCACCGCTGCGTTTTTGTGGGGAATATACCTTACGATGCCACTGAGGAACAGCTTGTAGAAATCTGCCAGGAGGTTGGTCCTGTTGTATCTTTCAGACTAGTTATTGATAGAGAGACTGGGAAACCAAAAGGTTATGGGTTTTGCGAATACAAGGATGAAGAGACTGCTCTAAGTGCTCGTCGCAATCTTCAGGGTTATGAAATCAATGGCCGGCAATTACGAGTTGATTTTGCTGAAAATGACAAAGGCACTGACAGAAGTCGAGAACAGGGTCGTGGTGGACCAGGACTGACTGCTAATGTTGACCCCCAAAAACAAGTAGGGGGACCATCTGTTCATGCAGAATCTCTTCAACATCAGCCAATTGGTCTCCATATTGCTATTACTGCAGCTACCGTCATGGCAGGAGCTCTAGGTGGTGCTCAGGCTGGTTTGCAGTCAGCTCAAAGTGGCTTGCAGAATCAATTGGCACCACCAAATGATCCCTTGACACTTCATCTGGCCAAAATGTCTAGGGGTCAGTTGAATCAAATTATGGCAGAACTCAGGGTAATGGCTATACAAAACAAAGAACTAGCTCGTCAACTATTGCTTGCAAGGCCACAGTTGCCAAAAGCCCTCTTCCAGGCACAAATAATGCTTGGAATGGTGAGCTCACAAATGTTGCGGATGCCAAATATCAGGCAAGCTTCAGGTCATATCTCACAGCCTCCATTCAACGAGGCCTTGCAGTCTGGGTTGGTGCCCAATGTGCAAGAAGGCCAATTTTCTGCTGTACCTCAAAATCCATTGGTTAGAAGCCAGTTTTCTGCACCCCAACAGCAACCCACGCACCCTCGAATGCCGCTTCCACAACATGCAAACCACCATGTTTTGCAACAGGTCTCATTACTGGGGCAATCTGGAGTTCCAACACTTCCTCCCATACACCCTCAGTCTTCAAGTGGTTTGTCCATTCGACCCCAAACTCAGCTTACAAATTCTTCTAGTTCAAACCAGAAAATGCAGCCTTCTTTACTACAGCACCCGGGTCAGGTTGGACGTGCAAATTTTGGGCTTAACACTCATATGGTTAATCCAATTGCTACTGTACAGCATTCTTCTTTACCTCGTCCTGTGTCTGAAGCCAGTTTCCAGCCTGGCTCTTCAATGTCTTCAGGAATCAACAGGGACAGATCCTTTCAAATGGTTAATGATTCTGTAGAATCAGTTAAGCGTTCTTCAAAGCTAATGAAATTGGATGATGGAAGGGGTAGCTCTTTGTCAAGAGTGGGTCTTAATGTGCCTAATGCCAATGGGTCTGTATTGCCCCATGCTTTGCCTGCGAAACCTGTTCATAAGTCAGAAGAAGTACAGCACTCTGAGAAACAGATTTCTCAGTCTGAGCTTCACCCTGGGGTGGAGTCTGCTCTACTACAACAAGTTTTGAGCCTAACACCGGAAAAACTGAGTTCATTGTCTCCGGAACAGCAACAAGAAGTAATAAAGCTCCAACAGTTGCTTCGGCGAGATCAGATTCAGCCATCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005847 GO:0005849 GO:0006139 GO:0006355 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016458 GO:0016604 GO:0019219 GO:0019222 GO:0031047 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032502 GO:0032991 GO:0034641 GO:0034660 GO:0040007 GO:0042868 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0048589 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0071920 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0098787 GO:0098789 GO:1901360 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

CSTF2_hinge CSTF_C RRM_1

Protein Analysis

515

Amino Acids

55.79

Weight (kDa)

9.23

Isoelectric Point (pI)

66.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	9 - 79	3.5e-23	RNA recognition motif
CSTF2_hinge	PF14327	165 - 227	1.9e-11	Hinge domain of cleavage stimulation factor subunit 2
CSTF_C	PF14304	475 - 508	2.4e-06	Transcription termination and cleavage factor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71800
fragaria_vesca	FvH4_2g12680 FvH4_2g12680 FvH4_2g12680 FvH4_2g12680
malus_domestica	MD05G1038100.v1.1 MD10G1041800.v1.1
prunus_persica	Prupe.8G045900_v2.0.a1
pyrus_communis	pycom05g02820 pycom10g02890
rosa_chinensis	RchiOBHm_Chr6g0273401
rosa_laevigata	RLG00000013620
rosa_multiflora	Rmu_sc0005891.1_g000012
rosa_roxburghii	Rroxscaffold_7G00195400
rosa_rugosa	Rorug06G0074600
rosa_samantha	Rh6AG189700 Rh6BG193100 Rh6CG192900 Rh6DG184400
rosa_wichuraiana	Rw6G016510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	484, 757
AccIII	TCCGGA	1 cut(s)	1477
AciI	CCGC	4 cut(s)	6, 19, 682, 860
AclWI	GGATC	2 cut(s)	491, 1185
AcoI	YGGCCR	3 cut(s)	3, 223, 516
AcsI	RAATTY	2 cut(s)	994, 1063
AcuI	CTGAAG	4 cut(s)	188, 690, 1155, 1158
AfaI	GTAC	3 cut(s)	792, 1107, 1368
AfiI	CCNNNNNNNGG	4 cut(s)	640, 1048, 1414, 1453
AgsI	TTSAA	8 cut(s)	368, 541, 733, 957, 1008, 1164, 1199, 1239
AhlI	ACTAGT	1 cut(s)	112
AjiI	CACGTC	1 cut(s)	1058
AjnI	CCWGG	5 cut(s)	81, 298, 639, 1153, 1408
AjuI	GAANNNNNNNTTGG	2 cut(s)	1500, 1532
AloI	GAACNNNNNNTCC	2 cut(s)	333, 365
Alw21I	GWGCWC	4 cut(s)	193, 427, 439, 671
Alw26I	GTCTC	5 cut(s)	122, 170, 389, 904, 1479
AlwI	GGATC	2 cut(s)	491, 1185
Ama87I	CYCGRG	1 cut(s)	1042
Aor13HI	TCCGGA	1 cut(s)	1477
AoxI	GGCC	6 cut(s)	3, 223, 516, 614, 738, 775
ApeKI	GCWGC	3 cut(s)	21, 404, 1021
ApoI	RAATTY	2 cut(s)	994, 1063
Asp700I	GAANNNNTTC	1 cut(s)	363
AspS9I	GGNCC	3 cut(s)	92, 296, 341
AsuC2I	CCSGG	2 cut(s)	1043, 1044
AsuHPI	GGTGA	2 cut(s)	676, 1397
AvaI	CYCGRG	1 cut(s)	1042
AvaII	GGWCC	3 cut(s)	92, 296, 341
BaeGI	GKGCMC	1 cut(s)	762
BalI	TGGCCA	1 cut(s)	518
BanI	GGYRCC	2 cut(s)	484, 757
BanII	GRGCYC	2 cut(s)	427, 671
BbsI	GAAGAC	2 cut(s)	945, 1161
Bbv12I	GWGCWC	4 cut(s)	193, 427, 439, 671
BbvI	GCAGC	3 cut(s)	8, 416, 1033
BccI	CCATC	2 cut(s)	352, 1253
BciT130I	CCWGG	5 cut(s)	83, 300, 641, 1155, 1410
BcnI	CCSGG	2 cut(s)	1043, 1044
BcoDI	GTCTC	5 cut(s)	122, 170, 389, 904, 1479
BcuI	ACTAGT	1 cut(s)	112
BfaI	CTAG	5 cut(s)	113, 428, 528, 590, 1002
BfmI	CTRYAG	3 cut(s)	402, 1034, 1215
BisI	GCNGC	5 cut(s)	6, 22, 405, 860, 1022
BlsI	GCNGC	5 cut(s)	7, 23, 406, 861, 1023
Bme1390I	CCNGG	7 cut(s)	83, 300, 641, 1043, 1044, 1155, 1410
Bme18I	GGWCC	3 cut(s)	92, 296, 341
BmeT110I	CYCGRG	1 cut(s)	1042
BmgBI	CACGTC	1 cut(s)	1058
BmgT120I	GGNCC	3 cut(s)	92, 296, 341
BmiI	GGNNCC	3 cut(s)	342, 486, 759
BmrFI	CCNGG	7 cut(s)	83, 300, 641, 1043, 1044, 1155, 1410
BmrI	ACTGGG	2 cut(s)	141, 917
BmsI	GCATC	2 cut(s)	40, 675
BmuI	ACTGGG	2 cut(s)	141, 917
BoxI	GACNNNNGTC	1 cut(s)	273
BpiI	GAAGAC	2 cut(s)	945, 1161
BpmI	CTGGAG	1 cut(s)	939
Bpu10I	CCTNAGC	1 cut(s)	438
BpuMI	CCSGG	2 cut(s)	1043, 1044
BsaI	GGTCTC	2 cut(s)	389, 904
BsaJI	CCNNGG	3 cut(s)	1042, 1408, 1409
BsaWI	WCCGGW	2 cut(s)	1453, 1477
BsaXI	ACNNNNNCTCC	2 cut(s)	919, 949
Bsc4I	CCNNNNNNNGG	4 cut(s)	640, 1048, 1414, 1453
Bse118I	RCCGGY	1 cut(s)	225
Bse1I	ACTGG	4 cut(s)	136, 817, 912, 1143
BseAI	TCCGGA	1 cut(s)	1477
BseBI	CCWGG	5 cut(s)	83, 300, 641, 1155, 1410
BseDI	CCNNGG	3 cut(s)	1042, 1408, 1409
BseGI	GGATG	3 cut(s)	175, 690, 1261
BseLI	CCNNNNNNNGG	4 cut(s)	640, 1048, 1414, 1453
BseNI	ACTGG	4 cut(s)	136, 817, 912, 1143
BseSI	GKGCMC	1 cut(s)	762
BseXI	GCAGC	3 cut(s)	8, 416, 1033
BsgI	GTGCAG	1 cut(s)	810
BshFI	GGCC	6 cut(s)	5, 225, 518, 616, 740, 777
BshNI	GGYRCC	2 cut(s)	484, 757
BsiHKAI	GWGCWC	4 cut(s)	193, 427, 439, 671
BsiHKCI	CYCGRG	1 cut(s)	1042
BsiSI	CCGG	4 cut(s)	226, 1043, 1454, 1478
BslFI	GGGAC	2 cut(s)	354, 1199
BslI	CCNNNNNNNGG	4 cut(s)	640, 1048, 1414, 1453
BsmAI	GTCTC	5 cut(s)	122, 170, 389, 904, 1479
BsmFI	GGGAC	2 cut(s)	354, 1199
BsmI	GAATGC	2 cut(s)	861, 1111
BsnI	GGCC	6 cut(s)	5, 225, 518, 616, 740, 777
Bso31I	GGTCTC	2 cut(s)	389, 904
BsoBI	CYCGRG	1 cut(s)	1042
Bsp1286I	GDGCHC	5 cut(s)	193, 427, 439, 671, 762
Bsp13I	TCCGGA	1 cut(s)	1477
Bsp1407I	TGTACA	1 cut(s)	1105
Bsp143I	GATC	3 cut(s)	496, 1190, 1525
BspACI	CCGC	4 cut(s)	6, 19, 682, 860
BspANI	GGCC	6 cut(s)	5, 225, 518, 616, 740, 777
BspEI	TCCGGA	1 cut(s)	1477
BspLI	GGNNCC	3 cut(s)	342, 486, 759
BspMAI	CTGCAG	1 cut(s)	406
BspPI	GGATC	2 cut(s)	491, 1185
BspQI	GCTCTTC	1 cut(s)	1165
BspT107I	GGYRCC	2 cut(s)	484, 757
BspTNI	GGTCTC	2 cut(s)	389, 904
BsrFI	RCCGGY	1 cut(s)	225
BsrGI	TGTACA	1 cut(s)	1105
BsrI	ACTGG	4 cut(s)	136, 817, 912, 1143
BssAI	RCCGGY	1 cut(s)	225
BssECI	CCNNGG	3 cut(s)	1042, 1408, 1409
BssMI	GATC	3 cut(s)	496, 1190, 1525
Bst2UI	CCWGG	5 cut(s)	83, 300, 641, 1155, 1410
Bst4CI	ACNGT	4 cut(s)	412, 621, 1105, 1512
Bst6I	CTCTTC	4 cut(s)	168, 369, 641, 1165
BstAUI	TGTACA	1 cut(s)	1105
BstC8I	GCNNGC	5 cut(s)	227, 470, 609, 702, 1338
BstENI	CCTNNNNNAGG	1 cut(s)	638
BstF5I	GGATG	3 cut(s)	175, 690, 1261
BstKTI	GATC	3 cut(s)	499, 1193, 1528
BstMAI	GTCTC	5 cut(s)	122, 170, 389, 904, 1479
BstMBI	GATC	3 cut(s)	496, 1190, 1525
BstMWI	GCNNNNNNNGC	7 cut(s)	188, 401, 613, 622, 766, 844, 1337
BstNI	CCWGG	5 cut(s)	83, 300, 641, 1155, 1410
BstNSI	RCATGY	1 cut(s)	875
BstPAI	GACNNNNGTC	1 cut(s)	273
BstSCI	CCNGG	7 cut(s)	81, 298, 639, 1041, 1042, 1153, 1408
BstSFI	CTRYAG	3 cut(s)	402, 1034, 1215
BstSLI	GKGCMC	1 cut(s)	762
BstV1I	GCAGC	3 cut(s)	8, 416, 1033
BstV2I	GAAGAC	2 cut(s)	945, 1161
BstX2I	RGATCY	1 cut(s)	1190
BstXI	CCANNNNNNTGG	1 cut(s)	89
BstYI	RGATCY	1 cut(s)	1190
BsuRI	GGCC	6 cut(s)	5, 225, 518, 616, 740, 777
BtrI	CACGTC	1 cut(s)	1058
BtsCI	GGATG	3 cut(s)	175, 690, 1261
BtsIMutI	CAGTG	2 cut(s)	54, 264
Cac8I	GCNNGC	5 cut(s)	227, 470, 609, 702, 1338
Cfr10I	RCCGGY	1 cut(s)	225
Cfr13I	GGNCC	3 cut(s)	92, 296, 341
Cfr9I	CCCGGG	1 cut(s)	1042
Csp6I	GTAC	3 cut(s)	791, 1106, 1367
CviAII	CATG	5 cut(s)	353, 415, 872, 884, 1328
CviQI	GTAC	3 cut(s)	791, 1106, 1367
DpnI	GATC	3 cut(s)	498, 1192, 1527
DpnII	GATC	3 cut(s)	496, 1190, 1525
EaeI	YGGCCR	3 cut(s)	3, 223, 516
Eam1104I	CTCTTC	4 cut(s)	168, 369, 641, 1165
EarI	CTCTTC	4 cut(s)	168, 369, 641, 1165
Ecl136II	GAGCTC	2 cut(s)	425, 669
Eco147I	AGGCCT	1 cut(s)	740
Eco24I	GRGCYC	2 cut(s)	427, 671
Eco31I	GGTCTC	2 cut(s)	389, 904
Eco47I	GGWCC	3 cut(s)	92, 296, 341
Eco53kI	GAGCTC	2 cut(s)	425, 669
Eco57I	CTGAAG	4 cut(s)	188, 690, 1155, 1158
Eco88I	CYCGRG	1 cut(s)	1042
EcoICRI	GAGCTC	2 cut(s)	425, 669
EcoNI	CCTNNNNNAGG	1 cut(s)	638
EcoRII	CCWGG	5 cut(s)	81, 298, 639, 1153, 1408
EcoT38I	GRGCYC	2 cut(s)	427, 671
FaeI	CATG	5 cut(s)	356, 418, 875, 887, 1331
FaqI	GGGAC	2 cut(s)	354, 1199
FatI	CATG	5 cut(s)	352, 414, 871, 883, 1327
FauNDI	CATATG	1 cut(s)	1083
Fnu4HI	GCNGC	5 cut(s)	6, 22, 405, 860, 1022
FokI	GGATG	3 cut(s)	182, 697, 1268
FriOI	GRGCYC	2 cut(s)	427, 671
Fsp4HI	GCNGC	5 cut(s)	6, 22, 405, 860, 1022
FspBI	CTAG	5 cut(s)	113, 428, 528, 590, 1002
GluI	GCNGC	5 cut(s)	6, 22, 405, 860, 1022
GsuI	CTGGAG	1 cut(s)	939
HaeIII	GGCC	6 cut(s)	5, 225, 518, 616, 740, 777
HapII	CCGG	4 cut(s)	226, 1043, 1454, 1478
Hin1II	CATG	5 cut(s)	356, 418, 875, 887, 1331
HincII	GTYRAC	2 cut(s)	319, 599
HindII	GTYRAC	2 cut(s)	319, 599
HindIII	AAGCTT	1 cut(s)	702
HinfI	GANTC	8 cut(s)	359, 475, 541, 1176, 1211, 1220, 1418, 1531
HpaII	CCGG	4 cut(s)	226, 1043, 1454, 1478
HphI	GGTGA	2 cut(s)	676, 1397
Hpy166II	GTNNAC	3 cut(s)	296, 319, 599
Hpy188I	TCNGA	6 cut(s)	110, 1138, 1360, 1378, 1399, 1530
Hpy188III	TCNNGA	5 cut(s)	278, 918, 1173, 1281, 1478
Hpy8I	GTNNAC	3 cut(s)	296, 319, 599
Hpy99I	CGWCG	1 cut(s)	198
HpyAV	CCTTC	3 cut(s)	767, 1035, 1257
HpyCH4III	ACNGT	4 cut(s)	412, 621, 1105, 1512
HpyCH4IV	ACGT	1 cut(s)	1057
HpyF10VI	GCNNNNNNNGC	7 cut(s)	188, 401, 613, 622, 766, 844, 1337
HpySE526I	ACGT	1 cut(s)	1057
Hsp92II	CATG	5 cut(s)	356, 418, 875, 887, 1331
Kpn2I	TCCGGA	1 cut(s)	1477
KroI	GCCGGC	1 cut(s)	225
KroNI	GCCGGC	1 cut(s)	227
Kzo9I	GATC	3 cut(s)	496, 1190, 1525
LguI	GCTCTTC	1 cut(s)	1165
LmnI	GCTCC	2 cut(s)	422, 1509
Lsp1109I	GCAGC	3 cut(s)	8, 416, 1033
LweI	GCATC	2 cut(s)	40, 675
MaeI	CTAG	5 cut(s)	113, 428, 528, 590, 1002
MaeII	ACGT	1 cut(s)	1057
MalI	GATC	3 cut(s)	498, 1192, 1527
MboI	GATC	3 cut(s)	496, 1190, 1525
MfeI	CAATTG	3 cut(s)	378, 479, 1095
MflI	RGATCY	1 cut(s)	1190
MhlI	GDGCHC	5 cut(s)	193, 427, 439, 671, 762
MlsI	TGGCCA	1 cut(s)	518
MluCI	AATT	9 cut(s)	230, 378, 479, 546, 779, 994, 1063, 1095, 1250
MluNI	TGGCCA	1 cut(s)	518
MlyI	GAGTC	1 cut(s)	1427
MmeI	TCCRAC	3 cut(s)	950, 1033, 1531
Mox20I	TGGCCA	1 cut(s)	518
MroI	TCCGGA	1 cut(s)	1477
MroNI	GCCGGC	1 cut(s)	225
MroXI	GAANNNNTTC	1 cut(s)	363
MscI	TGGCCA	1 cut(s)	518
MseI	TTAA	5 cut(s)	1074, 1089, 1206, 1227, 1293
MslI	CAYNNNNRTG	1 cut(s)	1082
Msp20I	TGGCCA	1 cut(s)	518
MspA1I	CMGCKG	1 cut(s)	21
MspI	CCGG	4 cut(s)	226, 1043, 1454, 1478
MspR9I	CCNGG	7 cut(s)	83, 300, 641, 1043, 1044, 1155, 1410
MunI	CAATTG	3 cut(s)	378, 479, 1095
Mva1269I	GAATGC	2 cut(s)	861, 1111
MvaI	CCWGG	5 cut(s)	83, 300, 641, 1155, 1410
MwoI	GCNNNNNNNGC	7 cut(s)	188, 401, 613, 622, 766, 844, 1337
NaeI	GCCGGC	1 cut(s)	227
NciI	CCSGG	2 cut(s)	1043, 1044
NdeI	CATATG	1 cut(s)	1083
NdeII	GATC	3 cut(s)	496, 1190, 1525
NgoMIV	GCCGGC	1 cut(s)	225
NlaIII	CATG	5 cut(s)	356, 418, 875, 887, 1331
NlaIV	GGNNCC	3 cut(s)	342, 486, 759
NspI	RCATGY	1 cut(s)	875
PasI	CCCWGGG	1 cut(s)	1409
PceI	AGGCCT	1 cut(s)	740
PciSI	GCTCTTC	1 cut(s)	1165
PctI	GAATGC	2 cut(s)	861, 1111
PdiI	GCCGGC	1 cut(s)	227
PdmI	GAANNNNTTC	1 cut(s)	363
PfeI	GAWTC	7 cut(s)	359, 475, 541, 1176, 1211, 1220, 1531
PkrI	GCNGC	5 cut(s)	7, 23, 406, 861, 1023
PleI	GAGTC	1 cut(s)	1426
PpsI	GAGTC	1 cut(s)	1426
PshAI	GACNNNNGTC	1 cut(s)	273
Psp124BI	GAGCTC	2 cut(s)	427, 671
Psp6I	CCWGG	5 cut(s)	81, 298, 639, 1153, 1408
PspGI	CCWGG	5 cut(s)	81, 298, 639, 1153, 1408
PspN4I	GGNNCC	3 cut(s)	342, 486, 759
PspPI	GGNCC	3 cut(s)	92, 296, 341
PstI	CTGCAG	1 cut(s)	406
PsuI	RGATCY	1 cut(s)	1190
RsaI	GTAC	3 cut(s)	792, 1107, 1368
RsaNI	GTAC	3 cut(s)	791, 1106, 1367
RseI	CAYNNNNRTG	1 cut(s)	1082
SacI	GAGCTC	2 cut(s)	427, 671
SapI	GCTCTTC	1 cut(s)	1165
SaqAI	TTAA	5 cut(s)	1074, 1089, 1206, 1227, 1293
SatI	GCNGC	5 cut(s)	6, 22, 405, 860, 1022
Sau3AI	GATC	3 cut(s)	496, 1190, 1525
Sau96I	GGNCC	3 cut(s)	92, 296, 341
SchI	GAGTC	1 cut(s)	1427
ScrFI	CCNGG	7 cut(s)	83, 300, 641, 1043, 1044, 1155, 1410
SduI	GDGCHC	5 cut(s)	193, 427, 439, 671, 762
SfaNI	GCATC	2 cut(s)	40, 675
SfcI	CTRYAG	3 cut(s)	402, 1034, 1215
SinI	GGWCC	3 cut(s)	92, 296, 341
SmaI	CCCGGG	1 cut(s)	1044
SmiMI	CAYNNNNRTG	1 cut(s)	1082
SpeI	ACTAGT	1 cut(s)	112
Sse9I	AATT	9 cut(s)	230, 378, 479, 546, 779, 994, 1063, 1095, 1250
SseBI	AGGCCT	1 cut(s)	740
SsiI	CCGC	4 cut(s)	6, 19, 682, 860
SspMI	CTAG	5 cut(s)	113, 428, 528, 590, 1002
SstI	GAGCTC	2 cut(s)	427, 671
StuI	AGGCCT	1 cut(s)	740
StyD4I	CCNGG	7 cut(s)	81, 298, 639, 1041, 1042, 1153, 1408
TaaI	ACNGT	4 cut(s)	412, 621, 1105, 1512
TaiI	ACGT	1 cut(s)	1060
TaqI	TCGA	3 cut(s)	277, 853, 973
TasI	AATT	9 cut(s)	230, 378, 479, 546, 779, 994, 1063, 1095, 1250
TatI	WGTACW	2 cut(s)	1105, 1366
TauI	GCSGC	2 cut(s)	8, 862
TfiI	GAWTC	7 cut(s)	359, 475, 541, 1176, 1211, 1220, 1531
Tru1I	TTAA	5 cut(s)	1074, 1089, 1206, 1227, 1293
Tru9I	TTAA	5 cut(s)	1074, 1089, 1206, 1227, 1293
TscAI	CASTG	2 cut(s)	61, 271
TseI	GCWGC	3 cut(s)	21, 404, 1021
TspDTI	ATGAA	7 cut(s)	186, 228, 341, 500, 1262, 1340, 1458
TspMI	CCCGGG	1 cut(s)	1042
TspRI	CASTG	2 cut(s)	61, 271
VpaK11BI	GGWCC	3 cut(s)	92, 296, 341
XagI	CCTNNNNNAGG	1 cut(s)	638
XapI	RAATTY	2 cut(s)	994, 1063
XceI	RCATGY	1 cut(s)	875
XmaI	CCCGGG	1 cut(s)	1042
XmnI	GAANNNNTTC	1 cut(s)	363
XspI	CTAG	5 cut(s)	113, 428, 528, 590, 1002

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.