Cleavage stimulation factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G71800 |
| fragaria_vesca | FvH4_2g12680 FvH4_2g12680 FvH4_2g12680 FvH4_2g12680 |
| malus_domestica | MD05G1038100.v1.1 MD10G1041800.v1.1 |
| prunus_persica | Prupe.8G045900_v2.0.a1 |
| pyrus_communis | pycom05g02820 pycom10g02890 |
| rosa_chinensis | RchiOBHm_Chr6g0273401 |
| rosa_laevigata | RLG00000013620 |
| rosa_multiflora | Rmu_sc0005891.1_g000012 |
| rosa_roxburghii | Rroxscaffold_7G00195400 |
| rosa_rugosa | Rorug06G0074600 |
| rosa_samantha | Rh6AG189700 Rh6BG193100 Rh6CG192900 Rh6DG184400 |
| rosa_wichuraiana | Rw6G016510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1008 |
| AciI | CCGC | 3 cut(s) | 81, 276, 289 |
| AclWI | GGATC | 2 cut(s) | 584, 740 |
| AcoI | YGGCCR | 3 cut(s) | 273, 493, 765 |
| AcuI | CTGAAG | 1 cut(s) | 458 |
| AfaI | GTAC | 3 cut(s) | 434, 816, 1043 |
| AfeI | AGCGCT | 1 cut(s) | 240 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 173, 889 |
| AflIII | ACRYGT | 1 cut(s) | 1122 |
| AgsI | TTSAA | 3 cut(s) | 638, 790, 982 |
| AhlI | ACTAGT | 1 cut(s) | 382 |
| AjnI | CCWGG | 2 cut(s) | 568, 888 |
| AluBI | AGCT | 9 cut(s) | 337, 665, 677, 695, 808, 842, 953, 1039, 1113 |
| AluI | AGCT | 9 cut(s) | 337, 665, 677, 695, 808, 842, 953, 1039, 1113 |
| Alw21I | GWGCWC | 4 cut(s) | 463, 697, 709, 810 |
| Alw26I | GTCTC | 6 cut(s) | 40, 47, 174, 392, 440, 659 |
| AlwI | GGATC | 2 cut(s) | 584, 740 |
| Ama87I | CYCGRG | 1 cut(s) | 171 |
| Aor51HI | AGCGCT | 1 cut(s) | 240 |
| AoxI | GGCC | 7 cut(s) | 273, 493, 611, 765, 863, 987, 1026 |
| ApeKI | GCWGC | 6 cut(s) | 236, 291, 674, 1036, 1098, 1110 |
| AseI | ATTAAT | 1 cut(s) | 18 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 633 |
| AspLEI | GCGC | 1 cut(s) | 241 |
| AspS9I | GGNCC | 4 cut(s) | 362, 566, 611, 988 |
| AsuC2I | CCSGG | 1 cut(s) | 353 |
| AsuHPI | GGTGA | 4 cut(s) | 55, 236, 729, 925 |
| AsuII | TTCGAA | 1 cut(s) | 75 |
| AsuNHI | GCTAGC | 1 cut(s) | 838 |
| AvaI | CYCGRG | 1 cut(s) | 171 |
| AvaII | GGWCC | 2 cut(s) | 362, 566 |
| BaeGI | GKGCMC | 1 cut(s) | 1013 |
| BalI | TGGCCA | 1 cut(s) | 767 |
| BanI | GGYRCC | 1 cut(s) | 1008 |
| BanII | GRGCYC | 3 cut(s) | 697, 810, 920 |
| Bbv12I | GWGCWC | 4 cut(s) | 463, 697, 709, 810 |
| BbvI | GCAGC | 6 cut(s) | 248, 278, 686, 1048, 1110, 1122 |
| BccI | CCATC | 1 cut(s) | 622 |
| BceAI | ACGGC | 1 cut(s) | 74 |
| BciT130I | CCWGG | 2 cut(s) | 570, 890 |
| BcnI | CCSGG | 1 cut(s) | 353 |
| BcoDI | GTCTC | 6 cut(s) | 40, 47, 174, 392, 440, 659 |
| BcuI | ACTAGT | 1 cut(s) | 382 |
| BfaI | CTAG | 4 cut(s) | 383, 698, 777, 839 |
| BfmI | CTRYAG | 1 cut(s) | 672 |
| BfoI | RGCGCY | 1 cut(s) | 242 |
| BisI | GCNGC | 7 cut(s) | 237, 276, 292, 675, 1037, 1099, 1111 |
| BlsI | GCNGC | 7 cut(s) | 238, 277, 293, 676, 1038, 1100, 1112 |
| Bme1390I | CCNGG | 3 cut(s) | 353, 570, 890 |
| Bme18I | GGWCC | 2 cut(s) | 362, 566 |
| BmeT110I | CYCGRG | 1 cut(s) | 171 |
| BmgT120I | GGNCC | 4 cut(s) | 362, 566, 611, 988 |
| BmiI | GGNNCC | 2 cut(s) | 612, 1010 |
| BmrFI | CCNGG | 3 cut(s) | 353, 570, 890 |
| BmsI | GCATC | 3 cut(s) | 310, 743, 924 |
| BmtI | GCTAGC | 1 cut(s) | 842 |
| Bpu14I | TTCGAA | 1 cut(s) | 75 |
| BpuEI | CTTGAG | 2 cut(s) | 283, 794 |
| BpuMI | CCSGG | 1 cut(s) | 353 |
| BsaI | GGTCTC | 1 cut(s) | 659 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 173, 889 |
| Bse118I | RCCGGY | 1 cut(s) | 495 |
| Bse1I | ACTGG | 2 cut(s) | 406, 1068 |
| Bse3DI | GCAATG | 1 cut(s) | 991 |
| BseBI | CCWGG | 2 cut(s) | 570, 890 |
| BseGI | GGATG | 2 cut(s) | 107, 445 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 173, 889 |
| BseMI | GCAATG | 1 cut(s) | 991 |
| BseMII | CTCAG | 3 cut(s) | 296, 318, 722 |
| BseNI | ACTGG | 2 cut(s) | 406, 1068 |
| BseRI | GAGGAG | 4 cut(s) | 189, 194, 245, 248 |
| BseSI | GKGCMC | 1 cut(s) | 1013 |
| BseXI | GCAGC | 6 cut(s) | 248, 278, 686, 1048, 1110, 1122 |
| BsgI | GTGCAG | 1 cut(s) | 1061 |
| BshFI | GGCC | 7 cut(s) | 275, 495, 613, 767, 865, 989, 1028 |
| BshNI | GGYRCC | 1 cut(s) | 1008 |
| BsiHKAI | GWGCWC | 4 cut(s) | 463, 697, 709, 810 |
| BsiHKCI | CYCGRG | 1 cut(s) | 171 |
| BsiSI | CCGG | 2 cut(s) | 352, 496 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 173, 889 |
| BsmAI | GTCTC | 6 cut(s) | 40, 47, 174, 392, 440, 659 |
| BsmBI | CGTCTC | 1 cut(s) | 174 |
| BsmI | GAATGC | 1 cut(s) | 1112 |
| BsnI | GGCC | 7 cut(s) | 275, 495, 613, 767, 865, 989, 1028 |
| Bso31I | GGTCTC | 1 cut(s) | 659 |
| BsoBI | CYCGRG | 1 cut(s) | 171 |
| Bsp119I | TTCGAA | 1 cut(s) | 75 |
| Bsp1286I | GDGCHC | 6 cut(s) | 463, 697, 709, 810, 920, 1013 |
| Bsp143I | GATC | 4 cut(s) | 486, 550, 589, 745 |
| BspACI | CCGC | 3 cut(s) | 81, 276, 289 |
| BspANI | GGCC | 7 cut(s) | 275, 495, 613, 767, 865, 989, 1028 |
| BspCNI | CTCAG | 3 cut(s) | 295, 319, 721 |
| BspLI | GGNNCC | 2 cut(s) | 612, 1010 |
| BspMAI | CTGCAG | 1 cut(s) | 676 |
| BspOI | GCTAGC | 1 cut(s) | 842 |
| BspPI | GGATC | 2 cut(s) | 584, 740 |
| BspT104I | TTCGAA | 1 cut(s) | 75 |
| BspT107I | GGYRCC | 1 cut(s) | 1008 |
| BspTNI | GGTCTC | 1 cut(s) | 659 |
| BsrDI | GCAATG | 1 cut(s) | 991 |
| BsrFI | RCCGGY | 1 cut(s) | 495 |
| BsrI | ACTGG | 2 cut(s) | 406, 1068 |
| BssAI | RCCGGY | 1 cut(s) | 495 |
| BssMI | GATC | 4 cut(s) | 486, 550, 589, 745 |
| Bst2UI | CCWGG | 2 cut(s) | 570, 890 |
| Bst4CI | ACNGT | 3 cut(s) | 28, 682, 870 |
| Bst6I | CTCTTC | 3 cut(s) | 438, 639, 890 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1095 |
| BstBI | TTCGAA | 1 cut(s) | 75 |
| BstC8I | GCNNGC | 5 cut(s) | 63, 497, 840, 858, 951 |
| BstDEI | CTNAG | 4 cut(s) | 282, 327, 455, 708 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 887 |
| BstF5I | GGATG | 2 cut(s) | 107, 445 |
| BstH2I | RGCGCY | 1 cut(s) | 242 |
| BstHHI | GCGC | 1 cut(s) | 241 |
| BstKTI | GATC | 4 cut(s) | 489, 553, 592, 748 |
| BstMAI | GTCTC | 6 cut(s) | 40, 47, 174, 392, 440, 659 |
| BstMBI | GATC | 4 cut(s) | 486, 550, 589, 745 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 458, 671, 862, 871, 1017, 1095, 1107 |
| BstNI | CCWGG | 2 cut(s) | 570, 890 |
| BstNSI | RCATGY | 3 cut(s) | 14, 65, 1126 |
| BstSCI | CCNGG | 3 cut(s) | 351, 568, 888 |
| BstSFI | CTRYAG | 1 cut(s) | 672 |
| BstSLI | GKGCMC | 1 cut(s) | 1013 |
| BstV1I | GCAGC | 6 cut(s) | 248, 278, 686, 1048, 1110, 1122 |
| BsuRI | GGCC | 7 cut(s) | 275, 495, 613, 767, 865, 989, 1028 |
| BtsCI | GGATG | 2 cut(s) | 107, 445 |
| BtsIMutI | CAGTG | 2 cut(s) | 324, 534 |
| Cac8I | GCNNGC | 5 cut(s) | 63, 497, 840, 858, 951 |
| CfoI | GCGC | 1 cut(s) | 241 |
| Cfr10I | RCCGGY | 1 cut(s) | 495 |
| Cfr13I | GGNCC | 4 cut(s) | 362, 566, 611, 988 |
| Csp6I | GTAC | 3 cut(s) | 433, 815, 1042 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 909, 944 |
| CviAII | CATG | 8 cut(s) | 11, 50, 62, 271, 623, 685, 1095, 1123 |
| CviQI | GTAC | 3 cut(s) | 433, 815, 1042 |
| DdeI | CTNAG | 4 cut(s) | 282, 327, 455, 708 |
| DpnI | GATC | 4 cut(s) | 488, 552, 591, 747 |
| DpnII | GATC | 4 cut(s) | 486, 550, 589, 745 |
| EaeI | YGGCCR | 3 cut(s) | 273, 493, 765 |
| Eam1104I | CTCTTC | 3 cut(s) | 438, 639, 890 |
| EarI | CTCTTC | 3 cut(s) | 438, 639, 890 |
| Ecl136II | GAGCTC | 2 cut(s) | 695, 808 |
| Eco24I | GRGCYC | 3 cut(s) | 697, 810, 920 |
| Eco31I | GGTCTC | 1 cut(s) | 659 |
| Eco47I | GGWCC | 2 cut(s) | 362, 566 |
| Eco47III | AGCGCT | 1 cut(s) | 240 |
| Eco53kI | GAGCTC | 2 cut(s) | 695, 808 |
| Eco57I | CTGAAG | 1 cut(s) | 458 |
| Eco88I | CYCGRG | 1 cut(s) | 171 |
| EcoICRI | GAGCTC | 2 cut(s) | 695, 808 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 887 |
| EcoRII | CCWGG | 2 cut(s) | 568, 888 |
| EcoT38I | GRGCYC | 3 cut(s) | 697, 810, 920 |
| Esp3I | CGTCTC | 1 cut(s) | 174 |
| FaeI | CATG | 8 cut(s) | 14, 53, 65, 274, 626, 688, 1098, 1126 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 225, 257 |
| FatI | CATG | 8 cut(s) | 10, 49, 61, 270, 622, 684, 1094, 1122 |
| Fnu4HI | GCNGC | 7 cut(s) | 237, 276, 292, 675, 1037, 1099, 1111 |
| FokI | GGATG | 2 cut(s) | 94, 452 |
| FriOI | GRGCYC | 3 cut(s) | 697, 810, 920 |
| Fsp4HI | GCNGC | 7 cut(s) | 237, 276, 292, 675, 1037, 1099, 1111 |
| FspBI | CTAG | 4 cut(s) | 383, 698, 777, 839 |
| GlaI | GCGC | 1 cut(s) | 240 |
| GluI | GCNGC | 7 cut(s) | 237, 276, 292, 675, 1037, 1099, 1111 |
| HaeII | RGCGCY | 1 cut(s) | 242 |
| HaeIII | GGCC | 7 cut(s) | 275, 495, 613, 767, 865, 989, 1028 |
| HapII | CCGG | 2 cut(s) | 352, 496 |
| HhaI | GCGC | 1 cut(s) | 241 |
| Hin1II | CATG | 8 cut(s) | 14, 53, 65, 274, 626, 688, 1098, 1126 |
| Hin6I | GCGC | 1 cut(s) | 239 |
| HinP1I | GCGC | 1 cut(s) | 239 |
| HincII | GTYRAC | 1 cut(s) | 848 |
| HindII | GTYRAC | 1 cut(s) | 848 |
| HindIII | AAGCTT | 1 cut(s) | 951 |
| HinfI | GANTC | 5 cut(s) | 162, 267, 629, 724, 790 |
| HpaII | CCGG | 2 cut(s) | 352, 496 |
| HphI | GGTGA | 4 cut(s) | 55, 236, 729, 925 |
| Hpy166II | GTNNAC | 3 cut(s) | 8, 566, 848 |
| Hpy188I | TCNGA | 2 cut(s) | 380, 908 |
| Hpy188III | TCNNGA | 4 cut(s) | 147, 171, 262, 548 |
| Hpy8I | GTNNAC | 3 cut(s) | 8, 566, 848 |
| Hpy99I | CGWCG | 1 cut(s) | 468 |
| HpyAV | CCTTC | 3 cut(s) | 162, 257, 1018 |
| HpyCH4III | ACNGT | 3 cut(s) | 28, 682, 870 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 458, 671, 862, 871, 1017, 1095, 1107 |
| HpyF3I | CTNAG | 4 cut(s) | 282, 327, 455, 708 |
| Hsp92II | CATG | 8 cut(s) | 14, 53, 65, 274, 626, 688, 1098, 1126 |
| HspAI | GCGC | 1 cut(s) | 239 |
| KroI | GCCGGC | 1 cut(s) | 495 |
| KroNI | GCCGGC | 1 cut(s) | 497 |
| Kzo9I | GATC | 4 cut(s) | 486, 550, 589, 745 |
| LmnI | GCTCC | 3 cut(s) | 136, 692, 805 |
| Lsp1109I | GCAGC | 6 cut(s) | 248, 278, 686, 1048, 1110, 1122 |
| LweI | GCATC | 3 cut(s) | 310, 743, 924 |
| MaeI | CTAG | 4 cut(s) | 383, 698, 777, 839 |
| MaeIII | GTNAC | 1 cut(s) | 416 |
| MalI | GATC | 4 cut(s) | 488, 552, 591, 747 |
| MboI | GATC | 4 cut(s) | 486, 550, 589, 745 |
| MboII | GAAGA | 9 cut(s) | 88, 211, 236, 239, 242, 455, 464, 626, 877 |
| MfeI | CAATTG | 2 cut(s) | 648, 728 |
| MhlI | GDGCHC | 6 cut(s) | 463, 697, 709, 810, 920, 1013 |
| MlsI | TGGCCA | 1 cut(s) | 767 |
| MluCI | AATT | 5 cut(s) | 31, 500, 648, 728, 1030 |
| MluNI | TGGCCA | 1 cut(s) | 767 |
| MmeI | TCCRAC | 1 cut(s) | 783 |
| Mox20I | TGGCCA | 1 cut(s) | 767 |
| MroNI | GCCGGC | 1 cut(s) | 495 |
| MroXI | GAANNNNTTC | 1 cut(s) | 633 |
| MscI | TGGCCA | 1 cut(s) | 767 |
| MseI | TTAA | 2 cut(s) | 18, 30 |
| Msp20I | TGGCCA | 1 cut(s) | 767 |
| MspA1I | CMGCKG | 2 cut(s) | 291, 1039 |
| MspI | CCGG | 2 cut(s) | 352, 496 |
| MspR9I | CCNGG | 3 cut(s) | 353, 570, 890 |
| MunI | CAATTG | 2 cut(s) | 648, 728 |
| Mva1269I | GAATGC | 1 cut(s) | 1112 |
| MvaI | CCWGG | 2 cut(s) | 570, 890 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 458, 671, 862, 871, 1017, 1095, 1107 |
| NaeI | GCCGGC | 1 cut(s) | 497 |
| NciI | CCSGG | 1 cut(s) | 353 |
| NdeII | GATC | 4 cut(s) | 486, 550, 589, 745 |
| NgoMIV | GCCGGC | 1 cut(s) | 495 |
| NheI | GCTAGC | 1 cut(s) | 838 |
| NlaIII | CATG | 8 cut(s) | 14, 53, 65, 274, 626, 688, 1098, 1126 |
| NlaIV | GGNNCC | 2 cut(s) | 612, 1010 |
| NspI | RCATGY | 3 cut(s) | 14, 65, 1126 |
| NspV | TTCGAA | 1 cut(s) | 75 |
| PaeI | GCATGC | 1 cut(s) | 65 |
| PaeR7I | CTCGAG | 1 cut(s) | 171 |
| PciI | ACATGT | 1 cut(s) | 1122 |
| PctI | GAATGC | 1 cut(s) | 1112 |
| PdiI | GCCGGC | 1 cut(s) | 497 |
| PdmI | GAANNNNTTC | 1 cut(s) | 633 |
| PfeI | GAWTC | 5 cut(s) | 162, 267, 629, 724, 790 |
| PkrI | GCNGC | 7 cut(s) | 238, 277, 293, 676, 1038, 1100, 1112 |
| PscI | ACATGT | 1 cut(s) | 1122 |
| PshBI | ATTAAT | 1 cut(s) | 18 |
| Psp124BI | GAGCTC | 2 cut(s) | 697, 810 |
| Psp6I | CCWGG | 2 cut(s) | 568, 888 |
| PspGI | CCWGG | 2 cut(s) | 568, 888 |
| PspN4I | GGNNCC | 2 cut(s) | 612, 1010 |
| PspPI | GGNCC | 4 cut(s) | 362, 566, 611, 988 |
| PstI | CTGCAG | 1 cut(s) | 676 |
| PvuII | CAGCTG | 1 cut(s) | 1039 |
| RsaI | GTAC | 3 cut(s) | 434, 816, 1043 |
| RsaNI | GTAC | 3 cut(s) | 433, 815, 1042 |
| SacI | GAGCTC | 2 cut(s) | 697, 810 |
| SaqAI | TTAA | 2 cut(s) | 18, 30 |
| SatI | GCNGC | 7 cut(s) | 237, 276, 292, 675, 1037, 1099, 1111 |
| Sau3AI | GATC | 4 cut(s) | 486, 550, 589, 745 |
| Sau96I | GGNCC | 4 cut(s) | 362, 566, 611, 988 |
| ScrFI | CCNGG | 3 cut(s) | 353, 570, 890 |
| SduI | GDGCHC | 6 cut(s) | 463, 697, 709, 810, 920, 1013 |
| SfaNI | GCATC | 3 cut(s) | 310, 743, 924 |
| SfcI | CTRYAG | 1 cut(s) | 672 |
| Sfr274I | CTCGAG | 1 cut(s) | 171 |
| SfuI | TTCGAA | 1 cut(s) | 75 |
| SinI | GGWCC | 2 cut(s) | 362, 566 |
| SlaI | CTCGAG | 1 cut(s) | 171 |
| SmlI | CTYRAG | 3 cut(s) | 171, 262, 809 |
| SmoI | CTYRAG | 3 cut(s) | 171, 262, 809 |
| SpeI | ACTAGT | 1 cut(s) | 382 |
| SphI | GCATGC | 1 cut(s) | 65 |
| Sse9I | AATT | 5 cut(s) | 31, 500, 648, 728, 1030 |
| SsiI | CCGC | 3 cut(s) | 81, 276, 289 |
| SspMI | CTAG | 4 cut(s) | 383, 698, 777, 839 |
| SstI | GAGCTC | 2 cut(s) | 697, 810 |
| StyD4I | CCNGG | 3 cut(s) | 351, 568, 888 |
| TaaI | ACNGT | 3 cut(s) | 28, 682, 870 |
| TaqI | TCGA | 6 cut(s) | 75, 123, 148, 172, 547, 1104 |
| TasI | AATT | 5 cut(s) | 31, 500, 648, 728, 1030 |
| TatI | WGTACW | 1 cut(s) | 432 |
| TauI | GCSGC | 1 cut(s) | 278 |
| TfiI | GAWTC | 5 cut(s) | 162, 267, 629, 724, 790 |
| Tru1I | TTAA | 2 cut(s) | 18, 30 |
| Tru9I | TTAA | 2 cut(s) | 18, 30 |
| TscAI | CASTG | 2 cut(s) | 331, 541 |
| TseI | GCWGC | 6 cut(s) | 236, 291, 674, 1036, 1098, 1110 |
| TspDTI | ATGAA | 6 cut(s) | 96, 246, 259, 456, 611, 749 |
| TspRI | CASTG | 2 cut(s) | 331, 541 |
| VpaK11BI | GGWCC | 2 cut(s) | 362, 566 |
| VspI | ATTAAT | 1 cut(s) | 18 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 887 |
| XceI | RCATGY | 3 cut(s) | 14, 65, 1126 |
| XhoI | CTCGAG | 1 cut(s) | 171 |
| XmnI | GAANNNNTTC | 1 cut(s) | 633 |
| XspI | CTAG | 4 cut(s) | 383, 698, 777, 839 |