FvH4_2g13850
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0011818
Physical Location & Seq
Reverse (-)
12082101 .. 12085449
3349 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g13850.t2

Sequence Viewer

Length: 1950 bp
ATGCTGGGGGACTTAGGGAGCTCCTCCGATGCCACCACCGCCACCGCTACGGCTGTTAAGCCTTTCGGGGCTCACGAGGGCGGTGGCGGTGATGGCGGGGTCGGCTCGAACTCGGGGGAAGAGGAGAAGAATAGTTATAGCAGAGGCGGTGGCGGTGGCGGTGACGATTTTGGTGATAGGAGCTTCGGTGGCAACCGATGGCCTCGCCAGGAAACGTTGGCTCTCTTGAAGATTCGGTCTGATATGGACGTGGCGTTTCGTGATGCAAGTGTTAAAGGTCCATTATGGGATGAAGTTTCAAGGAAGCTAGCAGAGCTTGGCTTTCATCGAAGCGCCAAGAAATGCAAGGAGAAATTCGAGAACGTCTACAAGTATCACAGGAGAACAAAAGAAGGCCGAACTGGCAAATCCGAGGGCAAGACCTATCGGTTTTTCGATCAGTTACAAGCCCTTGAAAATCAACCTCCTACTCCGACCACGCCCAACTCTACTACCACTCATCAACCAAGGCCGCAACCCACAATTGCAATGGCAGTGTCAAACCCTCCTCCTCTTCCTACAATTTCTCACATCAATAGTACTAGTACTAACAGTACTAATACTGTTCCATCAGCTGCACCACACCAAGGCATTGCAACACCAACAATCCCTAGCTCGTTATTCCCTCCAACAAACCCTATAACATTCACACCACCGCCGCAGCCTCCGCCGCAACAAAACCCTACTTCTCACCACCAGCATCACCAGGCCACTACATTTGTCCCGCCTTCTACATTTCCGAGCATATCATCCACCGACCTCATGTCGAATTCGACATCTTCGTCAACCTCATCCGACGAAGAAATGGAAGGTCGTGCCAAGAGGAAGAGGAAGTGGAAGGACTTCTTCGAGACCCTGATGAAGCAGGTTGTCTACAAGCAGGAGGATCTCCAGAAGAGGTTCCTTGAAGCCATCGAGAAGCGCGAGCACGAGCGAATGGCAAGAGAAGAAGCTTGGAGAATGCAGGAGATGGCCCGCATTAACCGCGAACGTGAAATTCTCGCCCAAGAACGCTCCATCGCCGCCGCCAAAGACTCCGCCGTCATGTCCTTCTTGCAAAAAATAGCCGAACAACAGCATAACCCCCAAGCCACACCCACTATTACTCCTAATAACCATTTGGTGACGTCACATCCGCCGCAGCCACACCCACCACCAGCTCAGCAACCAGCTCCTCCTCCGCAACGGCAGCAGACTACACCACCACCGCCAGCACTGCAGATAACACAAGCGCCGATCACGAGTTTCGAGATTACTCCGAGAGCAAACGGTGAGAGTAACAACGACAATAATAATATGGTAAGTGCTACTACTACGCCGAGCTCATCGAGATGGCCGAGAGTGGAGGTACATTCACTCATCAAGCTAAGAACAAGTCTGGACTCAAAGTACCAAGAGAACGGCCCCAAGGGACCTCTCTGGGAGGAGATATCGGCAGGGATGAAGAAGCTCGGGTACAACCGGAGCGCGAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAGAGCAACAAGAAGAGGCCCGAGGATTCCAAGACGTGTCCTTACTTCCACCTCCTCGACAGTTTGTACAAAGAGAGGAACAACAAGTACTTTGATCAGATGGGGAATAATAATAATAATAACGACAACAATAATTCACCAAAGCCGGAGAACAATGCGGCGCCGATGATGGTGAGGCCGGAGCAGCAGTGGCAACCTCCGAGGGTGGAACCAGAAATGGATCAAAACCATGAGGAAGAAGAGAGGGATGGTGACGAGGACGAGGACGAGGACGATGAGGAAGACGAGGGCAACTATGAGATAGTGGCAAACAAAGGAGCTTCAGTTTCAGTGGGAGCATCAGCAACAGCTGAGGCTACCGGATCGGGTAAGTGGGTGGTGGAGTAA

Protein Analysis

650

Amino Acids

72.33

Weight (kDa)

6.35

Isoelectric Point (pI)

58.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 65 - 151 3.5e-22 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 456 - 543 8.9e-25 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011818)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76880
fragaria_vesca FvH4_2g13850 FvH4_2g13850
malus_domestica MD05G1024400.v1.1 MD10G1025100.v1.1
prunus_persica Prupe.8G028700_v2.0.a1
pyrus_communis pycom05g01550 pycom05g01560 pycom10g01650
rosa_chinensis RchiOBHm_Chr6g0275541
rosa_laevigata RLG00000013458
rosa_multiflora Rmu_ssc0000162.1_g000013
rosa_roxburghii Rroxscaffold_7G00193200
rosa_rugosa Rorug06G0093800
rosa_samantha Rh6AG206300 Rh6BG209200 Rh6CG211400 Rh6DG201800
rosa_wichuraiana Rw6G017900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 820, 1079
AatII GACGTC 1 cut(s) 1169
Acc36I ACCTGC 1 cut(s) 895
AccB1I GGYRCC 1 cut(s) 1723
AccI GTMKAC 2 cut(s) 366, 912
AccII CGCG 3 cut(s) 963, 1026, 1508
AclI AACGTT 1 cut(s) 215
AclWI GGATC 3 cut(s) 933, 1791, 1933
AcoI YGGCCR 1 cut(s) 1373
AcsI RAATTY 3 cut(s) 353, 808, 1035
AcuI CTGAAG 1 cut(s) 1869
AcyI GRCGYC 2 cut(s) 1166, 1724
AfaI GTAC 9 cut(s) 580, 586, 595, 1389, 1430, 1496, 1547, 1631, 1652
AfiI CCNNNNNNNGG 1 cut(s) 626
AflIII ACRYGT 1 cut(s) 1598
AgsI TTSAA 5 cut(s) 229, 300, 455, 947, 1552
AhdI GACNNNNNGTC 1 cut(s) 802
AhlI ACTAGT 1 cut(s) 581
AjiI CACGTC 2 cut(s) 250, 1599
AjnI CCWGG 2 cut(s) 207, 744
Alw21I GWGCWC 3 cut(s) 23, 969, 1364
Alw26I GTCTC 1 cut(s) 884
AlwI GGATC 3 cut(s) 933, 1791, 1933
Ama87I CYCGRG 3 cut(s) 112, 1490, 1583
AoxI GGCC 9 cut(s) 200, 394, 509, 747, 1011, 1373, 1441, 1580, 1739
ApeKI GCWGC 5 cut(s) 614, 700, 1180, 1228, 1747
ApoI RAATTY 3 cut(s) 353, 808, 1035
Asp700I GAANNNNTTC 2 cut(s) 881, 938
AspLEI GCGC 5 cut(s) 335, 963, 1273, 1508, 1726
AspS9I GGNCC 5 cut(s) 278, 1012, 1442, 1451, 1581
AsuNHI GCTAGC 1 cut(s) 307
AvaI CYCGRG 3 cut(s) 112, 1490, 1583
AvaII GGWCC 2 cut(s) 278, 1451
BanI GGYRCC 1 cut(s) 1723
BanII GRGCYC 3 cut(s) 23, 73, 1364
BarI GAAGNNNNNNTAC 2 cut(s) 1478, 1510
BauI CACGAG 3 cut(s) 74, 968, 1279
BbsI GAAGAC 1 cut(s) 1851
Bbv12I GWGCWC 3 cut(s) 23, 969, 1364
BbvCI CCTCAGC 1 cut(s) 1914
BbvI GCAGC 5 cut(s) 601, 712, 1192, 1240, 1759
BceAI ACGGC 4 cut(s) 66, 1064, 1241, 1456
BciT130I CCWGG 2 cut(s) 209, 746
BclI TGATCA 1 cut(s) 1657
BcoDI GTCTC 1 cut(s) 884
BcuI ACTAGT 1 cut(s) 581
BfaI CTAG 3 cut(s) 308, 582, 651
BfmI CTRYAG 1 cut(s) 1256
BfoI RGCGCY 3 cut(s) 336, 1274, 1727
BfuAI ACCTGC 1 cut(s) 895
BglI GCCNNNNNGGC 1 cut(s) 402
BlpI GCTNAGC 1 cut(s) 1200
BmcAI AGTACT 5 cut(s) 580, 586, 595, 1547, 1652
Bme1390I CCNGG 2 cut(s) 209, 746
Bme18I GGWCC 2 cut(s) 278, 1451
BmeRI GACNNNNNGTC 1 cut(s) 802
BmeT110I CYCGRG 3 cut(s) 112, 1490, 1583
BmgBI CACGTC 2 cut(s) 250, 1599
BmgT120I GGNCC 5 cut(s) 278, 1012, 1442, 1451, 1581
BmiI GGNNCC 5 cut(s) 941, 1444, 1452, 1725, 1773
BmrFI CCNGG 2 cut(s) 209, 746
BmsI GCATC 4 cut(s) 19, 253, 748, 1910
BmtI GCTAGC 1 cut(s) 311
BpiI GAAGAC 1 cut(s) 1851
BpmI CTGGAG 1 cut(s) 914
Bpu10I CCTNAGC 1 cut(s) 1914
Bpu1102I GCTNAGC 1 cut(s) 1200
BsaHI GRCGYC 2 cut(s) 1166, 1724
BsaI GGTCTC 1 cut(s) 884
BsaJI CCNNGG 6 cut(s) 411, 506, 625, 1446, 1584, 1763
BsaWI WCCGGW 2 cut(s) 1500, 1922
BsaXI ACNNNNNCTCC 8 cut(s) 172, 202, 1129, 1159, 1736, 1766, 1872, 1902
Bsc4I CCNNNNNNNGG 1 cut(s) 626
Bse1I ACTGG 1 cut(s) 406
Bse3DI GCAATG 2 cut(s) 534, 630
BseBI CCWGG 2 cut(s) 209, 746
BseDI CCNNGG 6 cut(s) 411, 506, 625, 1446, 1584, 1763
BseGI GGATG 6 cut(s) 295, 788, 830, 1171, 1485, 1816
BseLI CCNNNNNNNGG 1 cut(s) 626
BseMI GCAATG 2 cut(s) 534, 630
BseMII CTCAG 2 cut(s) 1214, 1905
BseNI ACTGG 1 cut(s) 406
BseRI GAGGAG 8 cut(s) 13, 137, 537, 540, 1203, 1206, 1478, 1607
BseXI GCAGC 5 cut(s) 601, 712, 1192, 1240, 1759
BseYI CCCAGC 1 cut(s) 4
BsgI GTGCAG 1 cut(s) 600
Bsh1236I CGCG 3 cut(s) 963, 1026, 1508
BshFI GGCC 9 cut(s) 202, 396, 511, 749, 1013, 1375, 1443, 1582, 1741
BshNI GGYRCC 1 cut(s) 1723
BsiHKAI GWGCWC 3 cut(s) 23, 969, 1364
BsiHKCI CYCGRG 3 cut(s) 112, 1490, 1583
BsiSI CCGG 4 cut(s) 1501, 1709, 1742, 1923
BslFI GGGAC 3 cut(s) 23, 746, 1464
BslI CCNNNNNNNGG 1 cut(s) 626
BsmAI GTCTC 1 cut(s) 884
BsmFI GGGAC 3 cut(s) 23, 746, 1464
BsmI GAATGC 1 cut(s) 1005
BsnI GGCC 9 cut(s) 202, 396, 511, 749, 1013, 1375, 1443, 1582, 1741
Bso31I GGTCTC 1 cut(s) 884
BsoBI CYCGRG 3 cut(s) 112, 1490, 1583
Bsp1286I GDGCHC 4 cut(s) 23, 73, 969, 1364
Bsp1407I TGTACA 1 cut(s) 1629
Bsp143I GATC 6 cut(s) 436, 925, 1275, 1657, 1783, 1925
Bsp1720I GCTNAGC 1 cut(s) 1200
BspANI GGCC 9 cut(s) 202, 396, 511, 749, 1013, 1375, 1443, 1582, 1741
BspCNI CTCAG 2 cut(s) 1213, 1906
BspFNI CGCG 3 cut(s) 963, 1026, 1508
BspLI GGNNCC 5 cut(s) 941, 1444, 1452, 1725, 1773
BspMAI CTGCAG 1 cut(s) 1260
BspMI ACCTGC 1 cut(s) 895
BspOI GCTAGC 1 cut(s) 311
BspPI GGATC 3 cut(s) 933, 1791, 1933
BspT107I GGYRCC 1 cut(s) 1723
BspTNI GGTCTC 1 cut(s) 884
BsrDI GCAATG 2 cut(s) 534, 630
BsrGI TGTACA 1 cut(s) 1629
BsrI ACTGG 1 cut(s) 406
BssECI CCNNGG 6 cut(s) 411, 506, 625, 1446, 1584, 1763
BssMI GATC 6 cut(s) 436, 925, 1275, 1657, 1783, 1925
BssNI GRCGYC 2 cut(s) 1166, 1724
BssSI CACGAG 3 cut(s) 74, 968, 1279
BssT1I CCWWGG 3 cut(s) 506, 625, 1446
Bst2BI CACGAG 3 cut(s) 74, 968, 1279
Bst2UI CCWGG 2 cut(s) 209, 746
Bst4CI ACNGT 4 cut(s) 593, 604, 1310, 1625
Bst6I CTCTTC 7 cut(s) 114, 558, 860, 929, 1505, 1571, 1797
BstACI GRCGYC 2 cut(s) 1166, 1724
BstAUI TGTACA 1 cut(s) 1629
BstC8I GCNNGC 4 cut(s) 309, 965, 1015, 1251
BstDEI CTNAG 4 cut(s) 13, 1200, 1406, 1914
BstF5I GGATG 6 cut(s) 295, 788, 830, 1171, 1485, 1816
BstFNI CGCG 3 cut(s) 963, 1026, 1508
BstH2I RGCGCY 3 cut(s) 336, 1274, 1727
BstHHI GCGC 5 cut(s) 335, 963, 1273, 1508, 1726
BstKTI GATC 6 cut(s) 439, 928, 1278, 1660, 1786, 1928
BstMAI GTCTC 1 cut(s) 884
BstMBI GATC 6 cut(s) 436, 925, 1275, 1657, 1783, 1925
BstNI CCWGG 2 cut(s) 209, 746
BstSCI CCNGG 2 cut(s) 207, 744
BstSFI CTRYAG 1 cut(s) 1256
BstUI CGCG 3 cut(s) 963, 1026, 1508
BstV1I GCAGC 5 cut(s) 601, 712, 1192, 1240, 1759
BstV2I GAAGAC 1 cut(s) 1851
BstX2I RGATCY 1 cut(s) 925
BstYI RGATCY 1 cut(s) 925
BsuRI GGCC 9 cut(s) 202, 396, 511, 749, 1013, 1375, 1443, 1582, 1741
BtgZI GCGATG 1 cut(s) 1042
BtrI CACGTC 2 cut(s) 250, 1599
BtsCI GGATG 6 cut(s) 295, 788, 830, 1171, 1485, 1816
BtsI GCAGTG 3 cut(s) 540, 1253, 1757
BtsIMutI CAGTG 4 cut(s) 540, 1253, 1757, 1899
BveI ACCTGC 1 cut(s) 895
Cac8I GCNNGC 4 cut(s) 309, 965, 1015, 1251
CfoI GCGC 5 cut(s) 335, 963, 1273, 1508, 1726
Cfr13I GGNCC 5 cut(s) 278, 1012, 1442, 1451, 1581
Csp6I GTAC 9 cut(s) 579, 585, 594, 1388, 1429, 1495, 1546, 1630, 1651
CspCI CAANNNNNGTGG 2 cut(s) 739, 774
CviAII CATG 3 cut(s) 802, 1084, 1793
CviQI GTAC 9 cut(s) 579, 585, 594, 1388, 1429, 1495, 1546, 1630, 1651
DdeI CTNAG 4 cut(s) 13, 1200, 1406, 1914
DinI GGCGCC 1 cut(s) 1725
DpnI GATC 6 cut(s) 438, 927, 1277, 1659, 1785, 1927
DpnII GATC 6 cut(s) 436, 925, 1275, 1657, 1783, 1925
DrdI GACNNNNNNGTC 2 cut(s) 820, 1079
DriI GACNNNNNGTC 1 cut(s) 802
DseDI GACNNNNNNGTC 2 cut(s) 820, 1079
EaeI YGGCCR 1 cut(s) 1373
Eam1104I CTCTTC 7 cut(s) 114, 558, 860, 929, 1505, 1571, 1797
Eam1105I GACNNNNNGTC 1 cut(s) 802
EarI CTCTTC 7 cut(s) 114, 558, 860, 929, 1505, 1571, 1797
EciI GGCGGA 3 cut(s) 696, 1066, 1164
Ecl136II GAGCTC 2 cut(s) 21, 1362
Eco130I CCWWGG 3 cut(s) 506, 625, 1446
Eco24I GRGCYC 3 cut(s) 23, 73, 1364
Eco31I GGTCTC 1 cut(s) 884
Eco32I GATATC 1 cut(s) 1470
Eco47I GGWCC 2 cut(s) 278, 1451
Eco53kI GAGCTC 2 cut(s) 21, 1362
Eco57I CTGAAG 1 cut(s) 1869
Eco88I CYCGRG 3 cut(s) 112, 1490, 1583
EcoICRI GAGCTC 2 cut(s) 21, 1362
EcoO109I RGGNCCY 1 cut(s) 1451
EcoRI GAATTC 1 cut(s) 808
EcoRII CCWGG 2 cut(s) 207, 744
EcoRV GATATC 1 cut(s) 1470
EcoT14I CCWWGG 3 cut(s) 506, 625, 1446
EcoT38I GRGCYC 3 cut(s) 23, 73, 1364
EgeI GGCGCC 1 cut(s) 1725
EheI GGCGCC 1 cut(s) 1725
ErhI CCWWGG 3 cut(s) 506, 625, 1446
FaeI CATG 3 cut(s) 805, 1087, 1796
FalI AAGNNNNNCTT 2 cut(s) 869, 901
FaqI GGGAC 3 cut(s) 23, 746, 1464
FatI CATG 3 cut(s) 801, 1083, 1792
FauI CCCGC 3 cut(s) 89, 771, 1022
FbaI TGATCA 1 cut(s) 1657
FblI GTMKAC 2 cut(s) 366, 912
FokI GGATG 6 cut(s) 302, 775, 817, 1158, 1492, 1823
FriOI GRGCYC 3 cut(s) 23, 73, 1364
FspBI CTAG 3 cut(s) 308, 582, 651
GlaI GCGC 5 cut(s) 334, 962, 1272, 1507, 1725
GsaI CCCAGC 1 cut(s) 8
GsuI CTGGAG 1 cut(s) 914
HaeII RGCGCY 3 cut(s) 336, 1274, 1727
HaeIII GGCC 9 cut(s) 202, 396, 511, 749, 1013, 1375, 1443, 1582, 1741
HapII CCGG 4 cut(s) 1501, 1709, 1742, 1923
HhaI GCGC 5 cut(s) 335, 963, 1273, 1508, 1726
Hin1I GRCGYC 2 cut(s) 1166, 1724
Hin1II CATG 3 cut(s) 805, 1087, 1796
Hin6I GCGC 5 cut(s) 333, 961, 1271, 1506, 1724
HinP1I GCGC 5 cut(s) 333, 961, 1271, 1506, 1724
HincII GTYRAC 1 cut(s) 825
HindII GTYRAC 1 cut(s) 825
HindIII AAGCTT 1 cut(s) 990
HinfI GANTC 4 cut(s) 232, 1073, 1421, 1589
HpaII CCGG 4 cut(s) 1501, 1709, 1742, 1923
Hpy166II GTNNAC 3 cut(s) 367, 825, 913
Hpy188I TCNGA 9 cut(s) 28, 241, 412, 474, 780, 835, 1299, 1662, 1764
Hpy8I GTNNAC 3 cut(s) 367, 825, 913
Hpy99I CGWCG 1 cut(s) 839
HpyAV CCTTC 7 cut(s) 386, 777, 842, 871, 1099, 1549, 1555
HpyCH4III ACNGT 4 cut(s) 593, 604, 1310, 1625
HpyCH4IV ACGT 6 cut(s) 215, 249, 363, 1030, 1166, 1598
HpyCH4V TGCA 9 cut(s) 266, 345, 527, 617, 635, 1003, 1096, 1258, 1518
HpyF3I CTNAG 4 cut(s) 13, 1200, 1406, 1914
HpySE526I ACGT 6 cut(s) 215, 249, 363, 1030, 1166, 1598
Hsp92I GRCGYC 2 cut(s) 1166, 1724
Hsp92II CATG 3 cut(s) 805, 1087, 1796
HspAI GCGC 5 cut(s) 333, 961, 1271, 1506, 1724
KasI GGCGCC 1 cut(s) 1723
Ksp22I TGATCA 1 cut(s) 1657
Kzo9I GATC 6 cut(s) 436, 925, 1275, 1657, 1783, 1925
LmnI GCTCC 9 cut(s) 18, 26, 180, 1058, 1216, 1503, 1744, 1880, 1898
Lsp1109I GCAGC 5 cut(s) 601, 712, 1192, 1240, 1759
LweI GCATC 4 cut(s) 19, 253, 748, 1910
MaeI CTAG 3 cut(s) 308, 582, 651
MaeII ACGT 6 cut(s) 215, 249, 363, 1030, 1166, 1598
MaeIII GTNAC 6 cut(s) 161, 441, 1162, 1167, 1316, 1814
MalI GATC 6 cut(s) 438, 927, 1277, 1659, 1785, 1927
MboI GATC 6 cut(s) 436, 925, 1275, 1657, 1783, 1925
MfeI CAATTG 1 cut(s) 522
MflI RGATCY 1 cut(s) 925
MhlI GDGCHC 4 cut(s) 23, 73, 969, 1364
MluCI AATT 6 cut(s) 353, 522, 561, 808, 1035, 1696
Mly113I GGCGCC 1 cut(s) 1724
MlyI GAGTC 2 cut(s) 1067, 1415
MmeI TCCRAC 3 cut(s) 497, 692, 858
MroXI GAANNNNTTC 2 cut(s) 881, 938
MseI TTAA 3 cut(s) 57, 273, 1020
MslI CAYNNNNRTG 1 cut(s) 1369
MspA1I CMGCKG 2 cut(s) 614, 1913
MspI CCGG 4 cut(s) 1501, 1709, 1742, 1923
MspR9I CCNGG 2 cut(s) 209, 746
MunI CAATTG 1 cut(s) 522
Mva1269I GAATGC 1 cut(s) 1005
MvaI CCWGG 2 cut(s) 209, 746
MvnI CGCG 3 cut(s) 963, 1026, 1508
NarI GGCGCC 1 cut(s) 1724
NdeII GATC 6 cut(s) 436, 925, 1275, 1657, 1783, 1925
NheI GCTAGC 1 cut(s) 307
NlaIII CATG 3 cut(s) 805, 1087, 1796
NlaIV GGNNCC 5 cut(s) 941, 1444, 1452, 1725, 1773
NmeAIII GCCGAG 2 cut(s) 1383, 1401
NmuCI GTSAC 4 cut(s) 161, 1162, 1167, 1814
PcsI WCGNNNNNNNCGW 4 cut(s) 72, 818, 960, 1373
PctI GAATGC 1 cut(s) 1005
PdmI GAANNNNTTC 2 cut(s) 881, 938
PfeI GAWTC 2 cut(s) 232, 1589
PleI GAGTC 2 cut(s) 1067, 1415
PluTI GGCGCC 1 cut(s) 1727
PpsI GAGTC 2 cut(s) 1067, 1415
PpuMI RGGWCCY 1 cut(s) 1451
Psp124BI GAGCTC 2 cut(s) 23, 1364
Psp1406I AACGTT 1 cut(s) 215
Psp5II RGGWCCY 1 cut(s) 1451
Psp6I CCWGG 2 cut(s) 207, 744
PspFI CCCAGC 1 cut(s) 4
PspGI CCWGG 2 cut(s) 207, 744
PspN4I GGNNCC 5 cut(s) 941, 1444, 1452, 1725, 1773
PspPI GGNCC 5 cut(s) 278, 1012, 1442, 1451, 1581
PspPPI RGGWCCY 1 cut(s) 1451
PsrI GAACNNNNNNTAC 2 cut(s) 1634, 1666
PstI CTGCAG 1 cut(s) 1260
PsuI RGATCY 1 cut(s) 925
PvuII CAGCTG 2 cut(s) 614, 1913
RsaI GTAC 9 cut(s) 580, 586, 595, 1389, 1430, 1496, 1547, 1631, 1652
RsaNI GTAC 9 cut(s) 579, 585, 594, 1388, 1429, 1495, 1546, 1630, 1651
RseI CAYNNNNRTG 1 cut(s) 1369
SacI GAGCTC 2 cut(s) 23, 1364
SaqAI TTAA 3 cut(s) 57, 273, 1020
Sau3AI GATC 6 cut(s) 436, 925, 1275, 1657, 1783, 1925
Sau96I GGNCC 5 cut(s) 278, 1012, 1442, 1451, 1581
ScaI AGTACT 5 cut(s) 580, 586, 595, 1547, 1652
SchI GAGTC 2 cut(s) 1067, 1415
ScrFI CCNGG 2 cut(s) 209, 746
SduI GDGCHC 4 cut(s) 23, 73, 969, 1364
SfaNI GCATC 4 cut(s) 19, 253, 748, 1910
SfcI CTRYAG 1 cut(s) 1256
SfoI GGCGCC 1 cut(s) 1725
SinI GGWCC 2 cut(s) 278, 1451
SmiMI CAYNNNNRTG 1 cut(s) 1369
SpeI ACTAGT 1 cut(s) 581
Sse9I AATT 6 cut(s) 353, 522, 561, 808, 1035, 1696
SspDI GGCGCC 1 cut(s) 1723
SspMI CTAG 3 cut(s) 308, 582, 651
SstI GAGCTC 2 cut(s) 23, 1364
StyD4I CCNGG 2 cut(s) 207, 744
StyI CCWWGG 3 cut(s) 506, 625, 1446
TaaI ACNGT 4 cut(s) 593, 604, 1310, 1625
TaiI ACGT 6 cut(s) 218, 252, 366, 1033, 1169, 1601
TaqII GACCGA 1 cut(s) 225
TasI AATT 6 cut(s) 353, 522, 561, 808, 1035, 1696
TatI WGTACW 6 cut(s) 578, 584, 593, 1545, 1629, 1650
TauI GCSGC 7 cut(s) 514, 700, 712, 1064, 1067, 1180, 1724
TfiI GAWTC 2 cut(s) 232, 1589
Tru1I TTAA 3 cut(s) 57, 273, 1020
Tru9I TTAA 3 cut(s) 57, 273, 1020
TscAI CASTG 4 cut(s) 540, 1260, 1757, 1899
TseFI GTSAC 4 cut(s) 161, 1162, 1167, 1814
TseI GCWGC 5 cut(s) 614, 700, 1180, 1228, 1747
Tsp45I GTSAC 4 cut(s) 161, 1162, 1167, 1814
TspDTI ATGAA 4 cut(s) 306, 314, 914, 1496
TspRI CASTG 4 cut(s) 540, 1260, 1757, 1899
VpaK11BI GGWCC 2 cut(s) 278, 1451
XapI RAATTY 3 cut(s) 353, 808, 1035
XcmI CCANNNNNNNNNTGG 1 cut(s) 526
XmiI GTMKAC 2 cut(s) 366, 912
XmnI GAANNNNTTC 2 cut(s) 881, 938
XspI CTAG 3 cut(s) 308, 582, 651
ZraI GACGTC 1 cut(s) 1167
ZrmI AGTACT 5 cut(s) 580, 586, 595, 1547, 1652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.