Rroxscaffold_7G00193200
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0011818
Physical Location & Seq
Forward (+)
34566100 .. 34569310
3211 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00193200.1

Sequence Viewer

Length: 1935 bp
ATGCTGGGGGACTTGGGGAGCTCCTCCGACGCCACCACCGCCACCGCTATGGCCGCAGAACCCTTAGGGGCTCACGAAGGCGGTGGCGGTGATGGCGGTGTTGGCTCGAATTCGGGTGAAGAGGAGAAGAATAATTATAGCAGAAGTGGTGGTGGTGGTGGTGGTGAGGAATTTGGTGATAGGAGCTTCGGTGGCAACCGGTGGCCTCGCCAAGAAACGTTGGCTCTCTTGAAGATTCGGTCTGACATGGACGTGGCGTTTCGTGATGCAAGTGTTAAAGGTCCATTATGGGATGAAGTTTCCAGGAAGCTAGCAGAGCTTGGCTTTCATCGAAGCGCCAAGAAATGCAAGGAGAAATTCGAGAACGTCTACAAGTACCACAGGAGAACAAAAGAAGGCCGCACCGGGAAATCCGACGGCAAAACCTATCGGTTCTTCGATCAATTACAAGCCCTCGAAAATCAACCTCAAACTCCGACCACGCCCAACTCTACTACCACTCATCAACCGAGGCCACAACCCACAATTGCAATGGCAGTGTCAAACCCTCCTCCTCTTCCTACAATTTCTCATATCAATAGTACCAGTACTAACAGTACTAATACTGTTCCACCAACTGCACCACACCAAGGCATTGCAACACCAACAATTCCTAGTTCGTTATTCCCTCCAACAAACCCTATAATTTTCCCACCACCGCCACAGCCTCCGACGCAACAAAACCCTACTTCTCACCATCAGCATCATCAGGCCACTACATTTGTTCCACCTTCTAGTTTGCCAAGCATATCATCGACTGATCTCATGTCGAATTCGACCTCCTCGTCCACCTCATCGGACGAAGAAATGGAAGGGCGGGCCAAGAGGAAGAGGAAGTGGAAGGACTTCTTCGAGACTCTGATGAAGGAGGTGGTCCTCAAGCAGGAAGATCTCCAGAAGAGGTTTCTGGAAGCCATCGAGAAGCGCGAGCAGGAGCGAATGGCCAGAGAAGAAGCTTGGAGACTGCAGGAGTTGGCCCGCATCAACCGCGAACGAGAGATTCTTGCCCAAGAACGCTCCATCGCCGCCGCCAAAGACACCGCCGTCATGTCCTTCTTGCAAAAAATAGCCGAACAGCAACCGCAGCATAACCCCCAGGCCACATCCACTAATCCTAATAACCATTTGCTGACGTCACAAACGCCACAGCCACAGCCACAGCCACCGCCGGCGCAGCAATCAGTGTCTCTTCCTCCTCGACAACAGCAGCAGACTACACCACCACCGACACTGCAGATATCACAAGCGCCGATCACGACTTTCGAGATTACTCCGAGAGCAAATGGTGAGAACAGCAACAACAATAGTAATAATAATCTGGTAAGTCCTACTACTACGCCGAGCTCGTCGAGATGGCCGAAAGTGGAGGTACATTCACTTATCAAGCTAAGAAGAAGCCTGGATTCAAAGTACCAAGAGAACGGGCCCAAGGGACCGCTCTGGGAGGAGATATCGGGAGAGATGAAGAAGCTCGGGTACAACAGGAGCTCGAAGAGGTGCAAGGAGAAGTGGGAGAACATTAACAAGTACTTCAAGAAGGTCAAGGAGAGCAACAAGAAGAGGCCCGAGGATTCCAAGACGTGTCCTTACTTCCACCTCCTCGACAGTCTGTACAGAGAGAGGAACATCGGGAATAATAATGATAACAACAATAATTCACCAAAGCCGGAGAATGCGGCGCCGCTGATGGTGATGCCGGAGCAGCAGTGGCAGCCTCCGAACAGGGTCGAACCGGAGATGGAGAGCGAGCGGATGGATCAAAACCATGAGGAAGAAGATAGGGATGGTGACGAAGACGAGGAGGAGGACGAGGAGGAAGATGAGGGCAACTATGAGATAGTGGCAAACAAAGGAGCTTCAGTTTCAGTTTCAGTGGGAGCAACGACAGCTCAGTGA

Protein Analysis

644

Amino Acids

71.92

Weight (kDa)

6.01

Isoelectric Point (pI)

66.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 66 - 152 4.2e-22 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 463 - 550 4.2e-24 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011818)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76880
fragaria_vesca FvH4_2g13850 FvH4_2g13850
malus_domestica MD05G1024400.v1.1 MD10G1025100.v1.1
prunus_persica Prupe.8G028700_v2.0.a1
pyrus_communis pycom05g01550 pycom05g01560 pycom10g01650
rosa_chinensis RchiOBHm_Chr6g0275541
rosa_laevigata RLG00000013458
rosa_multiflora Rmu_ssc0000162.1_g000013
rosa_roxburghii Rroxscaffold_7G00193200
rosa_rugosa Rorug06G0093800
rosa_samantha Rh6AG206300 Rh6BG209200 Rh6CG211400 Rh6DG201800
rosa_wichuraiana Rw6G017900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 823, 1082
AatII GACGTC 1 cut(s) 1175
AccB1I GGYRCC 1 cut(s) 1717
AccBSI CCGCTC 2 cut(s) 1477, 1789
AccI GTMKAC 1 cut(s) 369
AccII CGCG 2 cut(s) 966, 1029
AclI AACGTT 1 cut(s) 218
AclWI GGATC 1 cut(s) 1803
AcoI YGGCCR 3 cut(s) 51, 981, 1394
AcsI RAATTY 4 cut(s) 109, 170, 356, 811
AcuI CTGAAG 1 cut(s) 1881
AcyI GRCGYC 3 cut(s) 30, 1172, 1718
AfaI GTAC 9 cut(s) 377, 583, 589, 598, 1410, 1451, 1517, 1568, 1652
AfiI CCNNNNNNNGG 2 cut(s) 629, 922
AflIII ACRYGT 1 cut(s) 1619
AgeI ACCGGT 1 cut(s) 198
AgsI TTSAA 3 cut(s) 232, 1446, 1573
AjiI CACGTC 2 cut(s) 253, 1620
AjnI CCWGG 3 cut(s) 302, 1134, 1437
Alw21I GWGCWC 3 cut(s) 23, 1385, 1529
Alw26I GTCTC 3 cut(s) 887, 994, 1230
AlwI GGATC 1 cut(s) 1803
Ama87I CYCGRG 2 cut(s) 1511, 1604
ApaI GGGCCC 1 cut(s) 1467
ApeKI GCWGC 5 cut(s) 1123, 1213, 1246, 1741, 1750
ApoI RAATTY 4 cut(s) 109, 170, 356, 811
AsiGI ACCGGT 1 cut(s) 198
Asp700I GAANNNNTTC 1 cut(s) 884
AspLEI GCGC 5 cut(s) 338, 966, 1213, 1288, 1720
AspS9I GGNCC 8 cut(s) 281, 858, 913, 1015, 1463, 1464, 1472, 1602
AsuC2I CCSGG 1 cut(s) 406
AsuHPI GGTGA 9 cut(s) 101, 128, 176, 188, 725, 1337, 1689, 1741, 1838
AsuNHI GCTAGC 1 cut(s) 310
AvaI CYCGRG 2 cut(s) 1511, 1604
AvaII GGWCC 3 cut(s) 281, 913, 1472
AxyI CCTNAGG 1 cut(s) 64
BaeGI GKGCMC 1 cut(s) 1467
BalI TGGCCA 1 cut(s) 983
BanI GGYRCC 1 cut(s) 1717
BanII GRGCYC 5 cut(s) 23, 73, 1385, 1467, 1529
BarI GAAGNNNNNNTAC 2 cut(s) 1499, 1531
BbsI GAAGAC 1 cut(s) 1839
Bbv12I GWGCWC 3 cut(s) 23, 1385, 1529
BbvI GCAGC 5 cut(s) 1135, 1225, 1258, 1753, 1762
BccI CCATC 9 cut(s) 86, 744, 962, 1067, 1386, 1720, 1771, 1786, 1817
BceAI ACGGC 2 cut(s) 433, 1067
BciT130I CCWGG 3 cut(s) 304, 1136, 1439
BcnI CCSGG 1 cut(s) 406
BcoDI GTCTC 3 cut(s) 887, 994, 1230
BfaI CTAG 3 cut(s) 311, 654, 774
BfmI CTRYAG 2 cut(s) 1004, 1271
BfoI RGCGCY 3 cut(s) 339, 1289, 1721
BglII AGATCT 1 cut(s) 928
BmcAI AGTACT 3 cut(s) 589, 598, 1568
Bme1390I CCNGG 4 cut(s) 304, 406, 1136, 1439
Bme18I GGWCC 3 cut(s) 281, 913, 1472
BmeT110I CYCGRG 2 cut(s) 1511, 1604
BmgBI CACGTC 2 cut(s) 253, 1620
BmgT120I GGNCC 8 cut(s) 281, 858, 913, 1015, 1463, 1464, 1472, 1602
BmiI GGNNCC 3 cut(s) 1465, 1473, 1719
BmrFI CCNGG 4 cut(s) 304, 406, 1136, 1439
BmsI GCATC 4 cut(s) 256, 751, 1029, 1722
BmtI GCTAGC 1 cut(s) 314
BpiI GAAGAC 1 cut(s) 1839
BpmI CTGGAG 1 cut(s) 917
BpuEI CTTGAG 1 cut(s) 902
BpuMI CCSGG 1 cut(s) 406
BsaHI GRCGYC 3 cut(s) 30, 1172, 1718
BsaJI CCNNGG 5 cut(s) 509, 628, 1134, 1467, 1605
BsaWI WCCGGW 2 cut(s) 198, 1771
BsaXI ACNNNNNCTCC 6 cut(s) 175, 205, 1730, 1760, 1884, 1914
Bsc4I CCNNNNNNNGG 2 cut(s) 629, 922
Bse118I RCCGGY 2 cut(s) 198, 1207
Bse1I ACTGG 1 cut(s) 585
Bse21I CCTNAGG 1 cut(s) 64
Bse3DI GCAATG 2 cut(s) 537, 633
BseBI CCWGG 3 cut(s) 304, 1136, 1439
BseDI CCNNGG 5 cut(s) 509, 628, 1134, 1467, 1605
BseGI GGATG 4 cut(s) 298, 1142, 1797, 1828
BseLI CCNNNNNNNGG 2 cut(s) 629, 922
BseMI GCAATG 2 cut(s) 537, 633
BseNI ACTGG 1 cut(s) 585
BseSI GKGCMC 1 cut(s) 1467
BseXI GCAGC 5 cut(s) 1135, 1225, 1258, 1753, 1762
BseYI CCCAGC 1 cut(s) 4
BsgI GTGCAG 1 cut(s) 603
Bsh1236I CGCG 2 cut(s) 966, 1029
BshNI GGYRCC 1 cut(s) 1717
BshTI ACCGGT 1 cut(s) 198
BsiHKAI GWGCWC 3 cut(s) 23, 1385, 1529
BsiHKCI CYCGRG 2 cut(s) 1511, 1604
BsiSI CCGG 6 cut(s) 199, 405, 1208, 1706, 1736, 1772
BslFI GGGAC 2 cut(s) 23, 1485
BslI CCNNNNNNNGG 2 cut(s) 629, 922
BsmAI GTCTC 3 cut(s) 887, 994, 1230
BsmFI GGGAC 2 cut(s) 23, 1485
BsmI GAATGC 1 cut(s) 1717
BsoBI CYCGRG 2 cut(s) 1511, 1604
Bsp120I GGGCCC 1 cut(s) 1463
Bsp1286I GDGCHC 5 cut(s) 23, 73, 1385, 1467, 1529
Bsp1407I TGTACA 1 cut(s) 1650
Bsp143I GATC 5 cut(s) 439, 799, 928, 1290, 1795
BspFNI CGCG 2 cut(s) 966, 1029
BspLI GGNNCC 3 cut(s) 1465, 1473, 1719
BspMAI CTGCAG 2 cut(s) 1008, 1275
BspOI GCTAGC 1 cut(s) 314
BspPI GGATC 1 cut(s) 1803
BspT107I GGYRCC 1 cut(s) 1717
BsrBI CCGCTC 2 cut(s) 1477, 1789
BsrDI GCAATG 2 cut(s) 537, 633
BsrFI RCCGGY 2 cut(s) 198, 1207
BsrGI TGTACA 1 cut(s) 1650
BsrI ACTGG 1 cut(s) 585
BssAI RCCGGY 2 cut(s) 198, 1207
BssECI CCNNGG 5 cut(s) 509, 628, 1134, 1467, 1605
BssMI GATC 5 cut(s) 439, 799, 928, 1290, 1795
BssNI GRCGYC 3 cut(s) 30, 1172, 1718
BssT1I CCWWGG 2 cut(s) 628, 1467
Bst2UI CCWGG 3 cut(s) 304, 1136, 1439
Bst4CI ACNGT 3 cut(s) 596, 607, 1646
Bst6I CTCTTC 7 cut(s) 114, 561, 863, 932, 1233, 1526, 1592
BstACI GRCGYC 3 cut(s) 30, 1172, 1718
BstAUI TGTACA 1 cut(s) 1650
BstC8I GCNNGC 6 cut(s) 312, 858, 968, 1018, 1209, 1787
BstDEI CTNAG 3 cut(s) 64, 1427, 1929
BstENI CCTNNNNNAGG 1 cut(s) 920
BstF5I GGATG 4 cut(s) 298, 1142, 1797, 1828
BstFNI CGCG 2 cut(s) 966, 1029
BstH2I RGCGCY 3 cut(s) 339, 1289, 1721
BstHHI GCGC 5 cut(s) 338, 966, 1213, 1288, 1720
BstKTI GATC 5 cut(s) 442, 802, 931, 1293, 1798
BstMAI GTCTC 3 cut(s) 887, 994, 1230
BstMBI GATC 5 cut(s) 439, 799, 928, 1290, 1795
BstNI CCWGG 3 cut(s) 304, 1136, 1439
BstSCI CCNGG 4 cut(s) 302, 404, 1134, 1437
BstSFI CTRYAG 2 cut(s) 1004, 1271
BstSLI GKGCMC 1 cut(s) 1467
BstUI CGCG 2 cut(s) 966, 1029
BstV1I GCAGC 5 cut(s) 1135, 1225, 1258, 1753, 1762
BstV2I GAAGAC 1 cut(s) 1839
BstX2I RGATCY 1 cut(s) 928
BstXI CCANNNNNNTGG 1 cut(s) 49
BstYI RGATCY 1 cut(s) 928
Bsu36I CCTNAGG 1 cut(s) 64
BtgZI GCGATG 1 cut(s) 1045
BtrI CACGTC 2 cut(s) 253, 1620
BtsCI GGATG 4 cut(s) 298, 1142, 1797, 1828
BtsI GCAGTG 3 cut(s) 543, 1268, 1751
BtsIMutI CAGTG 5 cut(s) 543, 1227, 1268, 1751, 1917
Cac8I GCNNGC 6 cut(s) 312, 858, 968, 1018, 1209, 1787
CfoI GCGC 5 cut(s) 338, 966, 1213, 1288, 1720
Cfr10I RCCGGY 2 cut(s) 198, 1207
Cfr13I GGNCC 8 cut(s) 281, 858, 913, 1015, 1463, 1464, 1472, 1602
CseI GACGC 2 cut(s) 38, 721
Csp6I GTAC 9 cut(s) 376, 582, 588, 597, 1409, 1450, 1516, 1567, 1651
CspAI ACCGGT 1 cut(s) 198
CspCI CAANNNNNGTGG 2 cut(s) 742, 777
CviAII CATG 4 cut(s) 247, 805, 1087, 1805
CviQI GTAC 9 cut(s) 376, 582, 588, 597, 1409, 1450, 1516, 1567, 1651
DdeI CTNAG 3 cut(s) 64, 1427, 1929
DinI GGCGCC 1 cut(s) 1719
DpnI GATC 5 cut(s) 441, 801, 930, 1292, 1797
DpnII GATC 5 cut(s) 439, 799, 928, 1290, 1795
DrdI GACNNNNNNGTC 2 cut(s) 823, 1082
DseDI GACNNNNNNGTC 2 cut(s) 823, 1082
EaeI YGGCCR 3 cut(s) 51, 981, 1394
Eam1104I CTCTTC 7 cut(s) 114, 561, 863, 932, 1233, 1526, 1592
EarI CTCTTC 7 cut(s) 114, 561, 863, 932, 1233, 1526, 1592
Ecl136II GAGCTC 3 cut(s) 21, 1383, 1527
Eco130I CCWWGG 2 cut(s) 628, 1467
Eco24I GRGCYC 5 cut(s) 23, 73, 1385, 1467, 1529
Eco32I GATATC 2 cut(s) 1278, 1491
Eco47I GGWCC 3 cut(s) 281, 913, 1472
Eco53kI GAGCTC 3 cut(s) 21, 1383, 1527
Eco57I CTGAAG 1 cut(s) 1881
Eco81I CCTNAGG 1 cut(s) 64
Eco88I CYCGRG 2 cut(s) 1511, 1604
EcoICRI GAGCTC 3 cut(s) 21, 1383, 1527
EcoNI CCTNNNNNAGG 1 cut(s) 920
EcoRI GAATTC 2 cut(s) 109, 811
EcoRII CCWGG 3 cut(s) 302, 1134, 1437
EcoRV GATATC 2 cut(s) 1278, 1491
EcoT14I CCWWGG 2 cut(s) 628, 1467
EcoT38I GRGCYC 5 cut(s) 23, 73, 1385, 1467, 1529
EgeI GGCGCC 1 cut(s) 1719
EheI GGCGCC 1 cut(s) 1719
ErhI CCWWGG 2 cut(s) 628, 1467
FaeI CATG 4 cut(s) 250, 808, 1090, 1808
FalI AAGNNNNNCTT 2 cut(s) 872, 904
FaqI GGGAC 2 cut(s) 23, 1485
FatI CATG 4 cut(s) 246, 804, 1086, 1804
FauI CCCGC 2 cut(s) 849, 1025
FblI GTMKAC 1 cut(s) 369
FokI GGATG 4 cut(s) 305, 1129, 1804, 1835
FriOI GRGCYC 5 cut(s) 23, 73, 1385, 1467, 1529
FspBI CTAG 3 cut(s) 311, 654, 774
GlaI GCGC 5 cut(s) 337, 965, 1212, 1287, 1719
GsaI CCCAGC 1 cut(s) 8
GsuI CTGGAG 1 cut(s) 917
HaeII RGCGCY 3 cut(s) 339, 1289, 1721
HapII CCGG 6 cut(s) 199, 405, 1208, 1706, 1736, 1772
HgaI GACGC 2 cut(s) 38, 721
HhaI GCGC 5 cut(s) 338, 966, 1213, 1288, 1720
Hin1I GRCGYC 3 cut(s) 30, 1172, 1718
Hin1II CATG 4 cut(s) 250, 808, 1090, 1808
Hin6I GCGC 5 cut(s) 336, 964, 1211, 1286, 1718
HinP1I GCGC 5 cut(s) 336, 964, 1211, 1286, 1718
HindIII AAGCTT 1 cut(s) 993
HinfI GANTC 5 cut(s) 235, 895, 1039, 1442, 1610
HpaII CCGG 6 cut(s) 199, 405, 1208, 1706, 1736, 1772
HphI GGTGA 9 cut(s) 101, 128, 176, 188, 725, 1337, 1689, 1741, 1838
Hpy166II GTNNAC 2 cut(s) 370, 828
Hpy188I TCNGA 9 cut(s) 28, 244, 415, 477, 711, 838, 900, 1314, 1758
Hpy8I GTNNAC 2 cut(s) 370, 828
Hpy99I CGWCG 4 cut(s) 32, 419, 715, 1390
HpyAV CCTTC 8 cut(s) 71, 389, 780, 845, 874, 898, 1102, 1570
HpyCH4III ACNGT 3 cut(s) 596, 607, 1646
HpyCH4IV ACGT 5 cut(s) 218, 252, 366, 1172, 1619
HpyCH4V TGCA 9 cut(s) 269, 348, 530, 620, 638, 1006, 1099, 1273, 1539
HpyF3I CTNAG 3 cut(s) 64, 1427, 1929
HpySE526I ACGT 5 cut(s) 218, 252, 366, 1172, 1619
Hsp92I GRCGYC 3 cut(s) 30, 1172, 1718
Hsp92II CATG 4 cut(s) 250, 808, 1090, 1808
HspAI GCGC 5 cut(s) 336, 964, 1211, 1286, 1718
KasI GGCGCC 1 cut(s) 1717
KroI GCCGGC 1 cut(s) 1207
KroNI GCCGGC 1 cut(s) 1209
Kzo9I GATC 5 cut(s) 439, 799, 928, 1290, 1795
LmnI GCTCC 9 cut(s) 18, 26, 183, 973, 1061, 1524, 1738, 1892, 1916
Lsp1109I GCAGC 5 cut(s) 1135, 1225, 1258, 1753, 1762
LweI GCATC 4 cut(s) 256, 751, 1029, 1722
MaeI CTAG 3 cut(s) 311, 654, 774
MaeII ACGT 5 cut(s) 218, 252, 366, 1172, 1619
MaeIII GTNAC 2 cut(s) 1173, 1826
MalI GATC 5 cut(s) 441, 801, 930, 1292, 1797
MbiI CCGCTC 2 cut(s) 1477, 1789
MboI GATC 5 cut(s) 439, 799, 928, 1290, 1795
MfeI CAATTG 1 cut(s) 525
MflI RGATCY 1 cut(s) 928
MhlI GDGCHC 5 cut(s) 23, 73, 1385, 1467, 1529
MlsI TGGCCA 1 cut(s) 983
MluNI TGGCCA 1 cut(s) 983
Mly113I GGCGCC 1 cut(s) 1718
MlyI GAGTC 1 cut(s) 889
MmeI TCCRAC 5 cut(s) 51, 438, 500, 695, 734
Mox20I TGGCCA 1 cut(s) 983
MreI CGCCGGCG 1 cut(s) 1207
MroNI GCCGGC 1 cut(s) 1207
MroXI GAANNNNTTC 1 cut(s) 884
MscI TGGCCA 1 cut(s) 983
MseI TTAA 2 cut(s) 276, 1560
MslI CAYNNNNRTG 2 cut(s) 47, 251
Msp20I TGGCCA 1 cut(s) 983
MspA1I CMGCKG 1 cut(s) 1723
MspI CCGG 6 cut(s) 199, 405, 1208, 1706, 1736, 1772
MspR9I CCNGG 4 cut(s) 304, 406, 1136, 1439
MunI CAATTG 1 cut(s) 525
Mva1269I GAATGC 1 cut(s) 1717
MvaI CCWGG 3 cut(s) 304, 1136, 1439
MvnI CGCG 2 cut(s) 966, 1029
NaeI GCCGGC 1 cut(s) 1209
NarI GGCGCC 1 cut(s) 1718
NciI CCSGG 1 cut(s) 406
NdeII GATC 5 cut(s) 439, 799, 928, 1290, 1795
NgoMIV GCCGGC 1 cut(s) 1207
NheI GCTAGC 1 cut(s) 310
NlaIII CATG 4 cut(s) 250, 808, 1090, 1808
NlaIV GGNNCC 3 cut(s) 1465, 1473, 1719
NmeAIII GCCGAG 1 cut(s) 1404
NmuCI GTSAC 2 cut(s) 1173, 1826
PcsI WCGNNNNNNNCGW 4 cut(s) 821, 963, 1382, 1394
PctI GAATGC 1 cut(s) 1717
PdiI GCCGGC 1 cut(s) 1209
PdmI GAANNNNTTC 1 cut(s) 884
PfeI GAWTC 4 cut(s) 235, 1039, 1442, 1610
PfoI TCCNGGA 1 cut(s) 302
PinAI ACCGGT 1 cut(s) 198
PleI GAGTC 1 cut(s) 889
PluTI GGCGCC 1 cut(s) 1721
PpsI GAGTC 1 cut(s) 889
Psp124BI GAGCTC 3 cut(s) 23, 1385, 1529
Psp1406I AACGTT 1 cut(s) 218
Psp6I CCWGG 3 cut(s) 302, 1134, 1437
PspFI CCCAGC 1 cut(s) 4
PspGI CCWGG 3 cut(s) 302, 1134, 1437
PspN4I GGNNCC 3 cut(s) 1465, 1473, 1719
PspOMI GGGCCC 1 cut(s) 1463
PspPI GGNCC 8 cut(s) 281, 858, 913, 1015, 1463, 1464, 1472, 1602
PstI CTGCAG 2 cut(s) 1008, 1275
PsuI RGATCY 1 cut(s) 928
RsaI GTAC 9 cut(s) 377, 583, 589, 598, 1410, 1451, 1517, 1568, 1652
RsaNI GTAC 9 cut(s) 376, 582, 588, 597, 1409, 1450, 1516, 1567, 1651
RseI CAYNNNNRTG 2 cut(s) 47, 251
SacI GAGCTC 3 cut(s) 23, 1385, 1529
SaqAI TTAA 2 cut(s) 276, 1560
Sau3AI GATC 5 cut(s) 439, 799, 928, 1290, 1795
Sau96I GGNCC 8 cut(s) 281, 858, 913, 1015, 1463, 1464, 1472, 1602
ScaI AGTACT 3 cut(s) 589, 598, 1568
SchI GAGTC 1 cut(s) 889
ScrFI CCNGG 4 cut(s) 304, 406, 1136, 1439
SduI GDGCHC 5 cut(s) 23, 73, 1385, 1467, 1529
SfaNI GCATC 4 cut(s) 256, 751, 1029, 1722
SfcI CTRYAG 2 cut(s) 1004, 1271
SfoI GGCGCC 1 cut(s) 1719
SgrAI CRCCGGYG 1 cut(s) 1207
SinI GGWCC 3 cut(s) 281, 913, 1472
SmiMI CAYNNNNRTG 2 cut(s) 47, 251
SmlI CTYRAG 1 cut(s) 917
SmoI CTYRAG 1 cut(s) 917
SspDI GGCGCC 1 cut(s) 1717
SspMI CTAG 3 cut(s) 311, 654, 774
SstI GAGCTC 3 cut(s) 23, 1385, 1529
StyD4I CCNGG 4 cut(s) 302, 404, 1134, 1437
StyI CCWWGG 2 cut(s) 628, 1467
TaaI ACNGT 3 cut(s) 596, 607, 1646
TaiI ACGT 5 cut(s) 221, 255, 369, 1175, 1622
TaqII GACCGA 1 cut(s) 228
TatI WGTACW 4 cut(s) 587, 596, 1566, 1650
TauI GCSGC 6 cut(s) 56, 402, 1067, 1070, 1718, 1723
TfiI GAWTC 4 cut(s) 235, 1039, 1442, 1610
Tru1I TTAA 2 cut(s) 276, 1560
Tru9I TTAA 2 cut(s) 276, 1560
TscAI CASTG 5 cut(s) 543, 1227, 1275, 1751, 1917
TseFI GTSAC 2 cut(s) 1173, 1826
TseI GCWGC 5 cut(s) 1123, 1213, 1246, 1741, 1750
Tsp45I GTSAC 2 cut(s) 1173, 1826
TspDTI ATGAA 4 cut(s) 309, 317, 917, 1517
TspRI CASTG 5 cut(s) 543, 1227, 1275, 1751, 1917
VpaK11BI GGWCC 3 cut(s) 281, 913, 1472
XagI CCTNNNNNAGG 1 cut(s) 920
XapI RAATTY 4 cut(s) 109, 170, 356, 811
XcmI CCANNNNNNNNNTGG 1 cut(s) 529
XmiI GTMKAC 1 cut(s) 369
XmnI GAANNNNTTC 1 cut(s) 884
XspI CTAG 3 cut(s) 311, 654, 774
ZraI GACGTC 1 cut(s) 1173
ZrmI AGTACT 3 cut(s) 589, 598, 1568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.