MD10G1025100.v1.1
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0011818
Physical Location & Seq
Forward (+)
3114619 .. 3117506
2888 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1025100.v1.1.491

Sequence Viewer

Length: 1995 bp
ATGCTGGGGGACTCAACTGGTGTGTTAGGGAGCTCCACCAGCCGCGATGCTGCGGCCGTGGCTGTGGCAGCTCCTGAAAGCGGTGGCGGCGATGGCTCGAATAATAATTCAGGTGAAGAAACGTTCAGAGGTGGTCATGAGGAACTTTCAGGAGGTGGTGAGAGGAGCTTCGGTGGCAACCGGTGGCCGCGCCAAGAGACTTTAGCTCTCTTGCAAATACGGTCTGACATGGACGTCGCCTTTCGTGATGCAAGTGTTAAAGGTCCTTTATGGGAAGAGGTTTCCAGGAAGCTTGCAGCGGTTGGCTATCATCGAAGCGCCAAGAAATGCAAGGAGAAGTTTGAGAATGTCTACAAGTACCACAGGAGAACCAAAGAAGGCCGCACCGGCAAGTCTGAAGGCAAGACTTATCGGTTTTTCGACCAGTTAAACGCCTTCGAAAATCAACCTCCGACCCCGGGCAGTACTAGTACTTCTCATCATCATCAACGGAAGCCTCATCAGCCTATGGCGGCGGCCGCGGCAACAATGACAACAACGGCAATGGCTAACCCTCCTCCAACAATTTTTCATCTTAATAGTAGTACTACTACAACTAGTACTACTGTTCCATCGTCAGCTGCACCGCACCCTACAATTAATAATGTGTACTCTCAAGGCATTGCAACACCAACACTTAATAAACTCACACTCCCCAGTTCATTCCCACCGACAAACCCTATAGTTCTTCCACCACCGCCACAACCTCCGCCGCATCAACCAACAACAGCAAACCCTACAACCAATGCCAACCAACATCAGCAGCAGCAGCACACTGGATTCCCAACGTCTTTCACAGCCATACCCACCGACATCATTTCCAATTCCACCTCTTCCTCCACCTCGTCCGACGAGGAGTTGGAAGGGCGGGCCAAGAAGAAGAGAAAATGGAAGGAATTCTTCGAGAGACTAATGAAGGATGTGATCCAGAAGCAAGAGGACCTCCAGAAGAGATTCTTGGAGACAATCGAGAAACGCGAACAAGAAAGAATGGTAAGGGAAGAAGCTTGGAGAATGCAAGAGATGGCAAGAATCAAAAGAGAGCGCGAGATTCTAGCCCAAGAAAGATCAATCACCGCAGCCAAAGATGCCGCTGTCATGTCATTCTTGCAAAGGGTATCTGAGCAGCAGCAAAATCAAAACCAAAACCAACACCAAAGCATGCCGAACCAATCACAGCTGCTGCTGTTACAACCAGCGCCACTGCCTCCACCGCGGAAGCCTGCACCACCACCACCACAAGCACAACCACAACAGACTGCGATGAACATTGACATTGTTCCGAAATCAAACAACAATGGGGAGAACGATAATTTGATGATGCCGCCAAGCTCATCAAGATGGCCGAAAGTGGAGGTACAAGCGTTGATCAAGCTGAGAACCAGCCTTGATTCTAAGTACCAAGAGAATGGACCGAAAGGGCCACTCTGGGAGGAAATCTCAGGAGCAATGAGGAAGCTCGGATACAACCGGAACGCAAAAAGGTGCAAAGAGAAGTGGGAGAACATTAACAAGTACTTCAAGAAAGTGAAGGAAAGCAACAAGAAAAGGCCCGAGGATTCGAAGACATGTCCCTACTTTCACCAGCTGGATAGTTTGTATAGAGAGAGGAACAAGTTCGATCAGAACAATGTCAATAGTACTAGTACTATTAATTCTTCGAGCCAATTCAAGCCCGAGAACTCGGTGCCTCTGATGGTGAGGCCGGAGCAGCAATGGCCACCTCAGCCGCCGCCACCGCAGCAGCAAGACCATCAGGGACTAATGATGGGTATTGACCATCATCAGAACCAAGGGGACGATCATCATGACCAGCAAGATAAAGAGAACAATATCGGCGATGACGATGACGAGGAGGAGGATGGAGAGGAGGAGGAGGATTATGATGAAGGTGATGGGAATTACGAGATAGTGGCAAACAAACCAGCTCCAGTGGGTGCAGCAACAGCTGAGTGA

Protein Analysis

665

Amino Acids

74.45

Weight (kDa)

6.47

Isoelectric Point (pI)

61.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 60 - 145 6.2e-22 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 459 - 546 2.6e-25 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011818)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76880
fragaria_vesca FvH4_2g13850 FvH4_2g13850
malus_domestica MD05G1024400.v1.1 MD10G1025100.v1.1
prunus_persica Prupe.8G028700_v2.0.a1
pyrus_communis pycom05g01550 pycom05g01560 pycom10g01650
rosa_chinensis RchiOBHm_Chr6g0275541
rosa_laevigata RLG00000013458
rosa_multiflora Rmu_ssc0000162.1_g000013
rosa_roxburghii Rroxscaffold_7G00193200
rosa_rugosa Rorug06G0093800
rosa_samantha Rh6AG206300 Rh6BG209200 Rh6CG211400 Rh6DG201800
rosa_wichuraiana Rw6G017900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 233
AatII GACGTC 1 cut(s) 237
AccB1I GGYRCC 1 cut(s) 1726
AccI GTMKAC 1 cut(s) 351
AccII CGCG 6 cut(s) 45, 190, 521, 1017, 1086, 1255
AclI AACGTT 1 cut(s) 122
AclWI GGATC 1 cut(s) 958
AcoI YGGCCR 5 cut(s) 54, 185, 516, 1382, 1757
AcsI RAATTY 1 cut(s) 935
AcuI CTGAAG 1 cut(s) 417
AcyI GRCGYC 1 cut(s) 234
AfiI CCNNNNNNNGG 2 cut(s) 80, 458
AflIII ACRYGT 1 cut(s) 1607
AgeI ACCGGT 1 cut(s) 180
AgsI TTSAA 2 cut(s) 1561, 1711
AhlI ACTAGT 3 cut(s) 467, 596, 1682
AjnI CCWGG 1 cut(s) 284
AjuI GAANNNNNNNTTGG 2 cut(s) 980, 1012
Alw21I GWGCWC 1 cut(s) 35
Alw26I GTCTC 3 cut(s) 191, 940, 995
AlwI GGATC 1 cut(s) 958
AlwNI CAGNNNCTG 2 cut(s) 74, 1222
Ama87I CYCGRG 3 cut(s) 457, 1592, 1715
ApoI RAATTY 1 cut(s) 935
AseI ATTAAT 2 cut(s) 639, 1692
AsiGI ACCGGT 1 cut(s) 180
Asp700I GAANNNNTTC 3 cut(s) 935, 992, 1655
AspLEI GCGC 4 cut(s) 192, 320, 1086, 1240
AspS9I GGNCC 6 cut(s) 263, 909, 979, 1451, 1460, 1590
AsuC2I CCSGG 2 cut(s) 458, 459
AsuHPI GGTGA 6 cut(s) 125, 170, 1105, 1613, 1750, 1943
AsuII TTCGAA 2 cut(s) 438, 1601
AvaI CYCGRG 3 cut(s) 457, 1592, 1715
AvaII GGWCC 3 cut(s) 263, 979, 1451
BaeI ACNNNNGTAYC 2 cut(s) 1388, 1421
BalI TGGCCA 1 cut(s) 1759
BanI GGYRCC 1 cut(s) 1726
BanII GRGCYC 1 cut(s) 35
BarI GAAGNNNNNNTAC 4 cut(s) 457, 489, 1487, 1519
BbsI GAAGAC 1 cut(s) 1610
Bbv12I GWGCWC 1 cut(s) 35
BbvCI CCTCAGC 1 cut(s) 1764
BceAI ACGGC 2 cut(s) 41, 555
BciT130I CCWGG 1 cut(s) 286
BciVI GTATCC 1 cut(s) 1496
BclI TGATCA 1 cut(s) 1407
BcnI CCSGG 2 cut(s) 458, 459
BcoDI GTCTC 3 cut(s) 191, 940, 995
BcuI ACTAGT 3 cut(s) 467, 596, 1682
BfaI CTAG 4 cut(s) 468, 597, 1094, 1683
BfmI CTRYAG 1 cut(s) 720
BfoI RGCGCY 2 cut(s) 321, 1241
BfuI GTATCC 1 cut(s) 1496
BglI GCCNNNNNGGC 1 cut(s) 387
BmcAI AGTACT 7 cut(s) 466, 472, 586, 601, 1556, 1681, 1687
Bme1390I CCNGG 3 cut(s) 286, 458, 459
Bme18I GGWCC 3 cut(s) 263, 979, 1451
BmeT110I CYCGRG 3 cut(s) 457, 1592, 1715
BmgT120I GGNCC 6 cut(s) 263, 909, 979, 1451, 1460, 1590
BmiI GGNNCC 1 cut(s) 1728
BmrFI CCNGG 3 cut(s) 286, 458, 459
BmrI ACTGGG 1 cut(s) 690
BmsI GCATC 5 cut(s) 37, 238, 763, 1117, 1350
BmuI ACTGGG 1 cut(s) 690
BpiI GAAGAC 1 cut(s) 1610
BplI GAGNNNNNCTC 2 cut(s) 1463, 1495
BpmI CTGGAG 2 cut(s) 968, 1953
Bpu10I CCTNAGC 1 cut(s) 1764
Bpu14I TTCGAA 2 cut(s) 438, 1601
BpuEI CTTGAG 1 cut(s) 639
BpuMI CCSGG 2 cut(s) 458, 459
BsaHI GRCGYC 1 cut(s) 234
BsaJI CCNNGG 7 cut(s) 57, 456, 457, 519, 1253, 1593, 1831
BsaWI WCCGGW 2 cut(s) 180, 1509
BsaXI ACNNNNNCTCC 4 cut(s) 157, 187, 675, 705
Bsc4I CCNNNNNNNGG 2 cut(s) 80, 458
Bse118I RCCGGY 2 cut(s) 180, 386
Bse1I ACTGG 5 cut(s) 22, 424, 696, 820, 1970
Bse3DI GCAATG 4 cut(s) 549, 660, 1494, 1760
BseBI CCWGG 1 cut(s) 286
BseDI CCNNGG 7 cut(s) 57, 456, 457, 519, 1253, 1593, 1831
BseGI GGATG 2 cut(s) 964, 1906
BseLI CCNNNNNNNGG 2 cut(s) 80, 458
BseMI GCAATG 4 cut(s) 549, 660, 1494, 1760
BseMII CTCAG 5 cut(s) 1152, 1406, 1494, 1778, 1980
BseNI ACTGG 5 cut(s) 22, 424, 696, 820, 1970
BseRI GAGGAG 8 cut(s) 178, 546, 908, 1907, 1910, 1922, 1925, 1928
BseX3I CGGCCG 2 cut(s) 54, 516
BseYI CCCAGC 1 cut(s) 4
BsgI GTGCAG 2 cut(s) 606, 1248
Bsh1236I CGCG 6 cut(s) 45, 190, 521, 1017, 1086, 1255
Bsh1285I CGRYCG 2 cut(s) 57, 519
BshNI GGYRCC 1 cut(s) 1726
BshTI ACCGGT 1 cut(s) 180
BsiEI CGRYCG 2 cut(s) 57, 519
BsiHKAI GWGCWC 1 cut(s) 35
BsiHKCI CYCGRG 3 cut(s) 457, 1592, 1715
BsiSI CCGG 5 cut(s) 181, 387, 458, 1510, 1745
BslFI GGGAC 4 cut(s) 23, 1596, 1812, 1850
BslI CCNNNNNNNGG 2 cut(s) 80, 458
BsmAI GTCTC 3 cut(s) 191, 940, 995
BsmFI GGGAC 4 cut(s) 23, 1596, 1812, 1850
BsmI GAATGC 1 cut(s) 1059
BsoBI CYCGRG 3 cut(s) 457, 1592, 1715
Bsp119I TTCGAA 2 cut(s) 438, 1601
Bsp1286I GDGCHC 1 cut(s) 35
Bsp143I GATC 5 cut(s) 963, 1106, 1407, 1660, 1840
BspCNI CTCAG 5 cut(s) 1153, 1407, 1493, 1777, 1981
BspFNI CGCG 6 cut(s) 45, 190, 521, 1017, 1086, 1255
BspHI TCATGA 2 cut(s) 136, 1846
BspLI GGNNCC 1 cut(s) 1728
BspPI GGATC 1 cut(s) 958
BspT104I TTCGAA 2 cut(s) 438, 1601
BspT107I GGYRCC 1 cut(s) 1726
BsrDI GCAATG 4 cut(s) 549, 660, 1494, 1760
BsrFI RCCGGY 2 cut(s) 180, 386
BsrI ACTGG 5 cut(s) 22, 424, 696, 820, 1970
BssAI RCCGGY 2 cut(s) 180, 386
BssECI CCNNGG 7 cut(s) 57, 456, 457, 519, 1253, 1593, 1831
BssMI GATC 5 cut(s) 963, 1106, 1407, 1660, 1840
BssNI GRCGYC 1 cut(s) 234
BssT1I CCWWGG 1 cut(s) 1831
Bst2UI CCWGG 1 cut(s) 286
Bst4CI ACNGT 2 cut(s) 222, 607
Bst6I CTCTTC 4 cut(s) 270, 877, 914, 983
BstACI GRCGYC 1 cut(s) 234
BstBI TTCGAA 2 cut(s) 438, 1601
BstC8I GCNNGC 4 cut(s) 294, 909, 1202, 1263
BstDEI CTNAG 6 cut(s) 1161, 1415, 1434, 1480, 1764, 1989
BstDSI CCRYGG 3 cut(s) 57, 519, 1253
BstF5I GGATG 2 cut(s) 964, 1906
BstFNI CGCG 6 cut(s) 45, 190, 521, 1017, 1086, 1255
BstH2I RGCGCY 2 cut(s) 321, 1241
BstHHI GCGC 4 cut(s) 192, 320, 1086, 1240
BstKTI GATC 5 cut(s) 966, 1109, 1410, 1663, 1843
BstMAI GTCTC 3 cut(s) 191, 940, 995
BstMBI GATC 5 cut(s) 963, 1106, 1407, 1660, 1840
BstMCI CGRYCG 2 cut(s) 57, 519
BstNI CCWGG 1 cut(s) 286
BstNSI RCATGY 2 cut(s) 1204, 1611
BstSCI CCNGG 3 cut(s) 284, 456, 457
BstSFI CTRYAG 1 cut(s) 720
BstUI CGCG 6 cut(s) 45, 190, 521, 1017, 1086, 1255
BstV2I GAAGAC 1 cut(s) 1610
BstXI CCANNNNNNTGG 1 cut(s) 1448
BstZI CGGCCG 2 cut(s) 54, 516
BsuI GTATCC 1 cut(s) 1496
BtgI CCRYGG 3 cut(s) 57, 519, 1253
BtgZI GCGATG 4 cut(s) 60, 105, 1316, 1893
BtsCI GGATG 2 cut(s) 964, 1906
BtsI GCAGTG 1 cut(s) 1241
BtsIMutI CAGTG 3 cut(s) 813, 1241, 1977
Cac8I GCNNGC 4 cut(s) 294, 909, 1202, 1263
CaiI CAGNNNCTG 2 cut(s) 74, 1222
CciI TCATGA 2 cut(s) 136, 1846
CciNI GCGGCCGC 1 cut(s) 516
CfoI GCGC 4 cut(s) 192, 320, 1086, 1240
Cfr10I RCCGGY 2 cut(s) 180, 386
Cfr13I GGNCC 6 cut(s) 263, 909, 979, 1451, 1460, 1590
Cfr42I CCGCGG 2 cut(s) 522, 1256
Cfr9I CCCGGG 1 cut(s) 457
CspAI ACCGGT 1 cut(s) 180
CviAII CATG 6 cut(s) 137, 229, 1138, 1201, 1608, 1847
DdeI CTNAG 6 cut(s) 1161, 1415, 1434, 1480, 1764, 1989
DpnI GATC 5 cut(s) 965, 1108, 1409, 1662, 1842
DpnII GATC 5 cut(s) 963, 1106, 1407, 1660, 1840
DrdI GACNNNNNNGTC 1 cut(s) 233
DseDI GACNNNNNNGTC 1 cut(s) 233
EaeI YGGCCR 5 cut(s) 54, 185, 516, 1382, 1757
EagI CGGCCG 2 cut(s) 54, 516
Eam1104I CTCTTC 4 cut(s) 270, 877, 914, 983
EarI CTCTTC 4 cut(s) 270, 877, 914, 983
EciI GGCGGA 1 cut(s) 738
Ecl136II GAGCTC 1 cut(s) 33
EclXI CGGCCG 2 cut(s) 54, 516
Eco130I CCWWGG 1 cut(s) 1831
Eco24I GRGCYC 1 cut(s) 35
Eco47I GGWCC 3 cut(s) 263, 979, 1451
Eco52I CGGCCG 2 cut(s) 54, 516
Eco53kI GAGCTC 1 cut(s) 33
Eco57I CTGAAG 1 cut(s) 417
Eco88I CYCGRG 3 cut(s) 457, 1592, 1715
EcoICRI GAGCTC 1 cut(s) 33
EcoO109I RGGNCCY 2 cut(s) 263, 979
EcoRI GAATTC 1 cut(s) 935
EcoRII CCWGG 1 cut(s) 284
EcoT14I CCWWGG 1 cut(s) 1831
EcoT38I GRGCYC 1 cut(s) 35
ErhI CCWWGG 1 cut(s) 1831
FaeI CATG 6 cut(s) 140, 232, 1141, 1204, 1611, 1850
FalI AAGNNNNNCTT 4 cut(s) 923, 955, 980, 1012
FaqI GGGAC 4 cut(s) 23, 1596, 1812, 1850
FatI CATG 6 cut(s) 136, 228, 1137, 1200, 1607, 1846
FauI CCCGC 1 cut(s) 900
FbaI TGATCA 1 cut(s) 1407
FblI GTMKAC 1 cut(s) 351
FokI GGATG 2 cut(s) 971, 1913
FriOI GRGCYC 1 cut(s) 35
FspBI CTAG 4 cut(s) 468, 597, 1094, 1683
GlaI GCGC 4 cut(s) 191, 319, 1085, 1239
GsaI CCCAGC 1 cut(s) 8
GsuI CTGGAG 2 cut(s) 968, 1953
HaeII RGCGCY 2 cut(s) 321, 1241
HapII CCGG 5 cut(s) 181, 387, 458, 1510, 1745
HhaI GCGC 4 cut(s) 192, 320, 1086, 1240
Hin1I GRCGYC 1 cut(s) 234
Hin1II CATG 6 cut(s) 140, 232, 1141, 1204, 1611, 1850
Hin6I GCGC 4 cut(s) 190, 318, 1084, 1238
HinP1I GCGC 4 cut(s) 190, 318, 1084, 1238
HindIII AAGCTT 2 cut(s) 290, 1044
HinfI GANTC 7 cut(s) 11, 819, 993, 1071, 1090, 1430, 1598
HpaII CCGG 5 cut(s) 181, 387, 458, 1510, 1745
HphI GGTGA 6 cut(s) 125, 170, 1105, 1613, 1750, 1943
Hpy166II GTNNAC 2 cut(s) 352, 649
Hpy8I GTNNAC 2 cut(s) 352, 649
Hpy99I CGWCG 2 cut(s) 239, 893
HpyAV CCTTC 8 cut(s) 371, 392, 445, 896, 925, 949, 1564, 1922
HpyCH4III ACNGT 2 cut(s) 222, 607
HpyCH4IV ACGT 3 cut(s) 122, 234, 827
HpyF3I CTNAG 6 cut(s) 1161, 1415, 1434, 1480, 1764, 1989
HpySE526I ACGT 3 cut(s) 122, 234, 827
Hsp92I GRCGYC 1 cut(s) 234
Hsp92II CATG 6 cut(s) 140, 232, 1141, 1204, 1611, 1850
HspAI GCGC 4 cut(s) 190, 318, 1084, 1238
Ksp22I TGATCA 1 cut(s) 1407
KspI CCGCGG 2 cut(s) 522, 1256
Kzo9I GATC 5 cut(s) 963, 1106, 1407, 1660, 1840
LmnI GCTCC 7 cut(s) 30, 38, 76, 165, 1484, 1747, 1972
LweI GCATC 5 cut(s) 37, 238, 763, 1117, 1350
MaeI CTAG 4 cut(s) 468, 597, 1094, 1683
MaeII ACGT 3 cut(s) 122, 234, 827
MaeIII GTNAC 1 cut(s) 1227
MalI GATC 5 cut(s) 965, 1108, 1409, 1662, 1842
MboI GATC 5 cut(s) 963, 1106, 1407, 1660, 1840
MhlI GDGCHC 1 cut(s) 35
MlsI TGGCCA 1 cut(s) 1759
MluCI AATT 9 cut(s) 106, 564, 636, 862, 935, 1351, 1693, 1706, 1939
MluNI TGGCCA 1 cut(s) 1759
MlyI GAGTC 1 cut(s) 5
MmeI TCCRAC 4 cut(s) 476, 584, 879, 912
Mox20I TGGCCA 1 cut(s) 1759
MroXI GAANNNNTTC 3 cut(s) 935, 992, 1655
MscI TGGCCA 1 cut(s) 1759
MseI TTAA 7 cut(s) 258, 428, 576, 639, 678, 1548, 1692
MslI CAYNNNNRTG 1 cut(s) 1378
Msp20I TGGCCA 1 cut(s) 1759
MspA1I CMGCKG 8 cut(s) 299, 521, 620, 1133, 1219, 1255, 1627, 1988
MspI CCGG 5 cut(s) 181, 387, 458, 1510, 1745
MspR9I CCNGG 3 cut(s) 286, 458, 459
Mva1269I GAATGC 1 cut(s) 1059
MvaI CCWGG 1 cut(s) 286
MvnI CGCG 6 cut(s) 45, 190, 521, 1017, 1086, 1255
NciI CCSGG 2 cut(s) 458, 459
NdeII GATC 5 cut(s) 963, 1106, 1407, 1660, 1840
NlaIII CATG 6 cut(s) 140, 232, 1141, 1204, 1611, 1850
NlaIV GGNNCC 1 cut(s) 1728
NotI GCGGCCGC 1 cut(s) 516
NspI RCATGY 2 cut(s) 1204, 1611
NspV TTCGAA 2 cut(s) 438, 1601
PaeI GCATGC 1 cut(s) 1204
PagI TCATGA 2 cut(s) 136, 1846
PciI ACATGT 1 cut(s) 1607
PcsI WCGNNNNNNNCGW 2 cut(s) 1014, 1881
PctI GAATGC 1 cut(s) 1059
PdmI GAANNNNTTC 3 cut(s) 935, 992, 1655
PfeI GAWTC 6 cut(s) 819, 993, 1071, 1090, 1430, 1598
PfoI TCCNGGA 1 cut(s) 284
PinAI ACCGGT 1 cut(s) 180
PleI GAGTC 1 cut(s) 5
PpsI GAGTC 1 cut(s) 5
PpuMI RGGWCCY 2 cut(s) 263, 979
PscI ACATGT 1 cut(s) 1607
PshBI ATTAAT 2 cut(s) 639, 1692
Psp124BI GAGCTC 1 cut(s) 35
Psp1406I AACGTT 1 cut(s) 122
Psp5II RGGWCCY 2 cut(s) 263, 979
Psp6I CCWGG 1 cut(s) 284
PspFI CCCAGC 1 cut(s) 4
PspGI CCWGG 1 cut(s) 284
PspN4I GGNNCC 1 cut(s) 1728
PspPI GGNCC 6 cut(s) 263, 909, 979, 1451, 1460, 1590
PspPPI RGGWCCY 2 cut(s) 263, 979
PstNI CAGNNNCTG 2 cut(s) 74, 1222
PvuII CAGCTG 4 cut(s) 620, 1219, 1627, 1988
RseI CAYNNNNRTG 1 cut(s) 1378
SacI GAGCTC 1 cut(s) 35
SacII CCGCGG 2 cut(s) 522, 1256
SaqAI TTAA 7 cut(s) 258, 428, 576, 639, 678, 1548, 1692
Sau3AI GATC 5 cut(s) 963, 1106, 1407, 1660, 1840
Sau96I GGNCC 6 cut(s) 263, 909, 979, 1451, 1460, 1590
ScaI AGTACT 7 cut(s) 466, 472, 586, 601, 1556, 1681, 1687
SchI GAGTC 1 cut(s) 5
ScrFI CCNGG 3 cut(s) 286, 458, 459
SduI GDGCHC 1 cut(s) 35
SfaNI GCATC 5 cut(s) 37, 238, 763, 1117, 1350
SfcI CTRYAG 1 cut(s) 720
Sfr303I CCGCGG 2 cut(s) 522, 1256
SfuI TTCGAA 2 cut(s) 438, 1601
SgrBI CCGCGG 2 cut(s) 522, 1256
SinI GGWCC 3 cut(s) 263, 979, 1451
SmaI CCCGGG 1 cut(s) 459
SmiMI CAYNNNNRTG 1 cut(s) 1378
SmlI CTYRAG 1 cut(s) 654
SmoI CTYRAG 1 cut(s) 654
SpeI ACTAGT 3 cut(s) 467, 596, 1682
SphI GCATGC 1 cut(s) 1204
Sse9I AATT 9 cut(s) 106, 564, 636, 862, 935, 1351, 1693, 1706, 1939
SspMI CTAG 4 cut(s) 468, 597, 1094, 1683
SstI GAGCTC 1 cut(s) 35
StyD4I CCNGG 3 cut(s) 284, 456, 457
StyI CCWWGG 1 cut(s) 1831
TaaI ACNGT 2 cut(s) 222, 607
TaiI ACGT 3 cut(s) 125, 237, 830
TaqI TCGA 9 cut(s) 98, 313, 420, 438, 942, 1008, 1601, 1659, 1700
TaqII GACCGA 1 cut(s) 1468
TasI AATT 9 cut(s) 106, 564, 636, 862, 935, 1351, 1693, 1706, 1939
TatI WGTACW 8 cut(s) 464, 470, 584, 599, 648, 1554, 1679, 1685
TfiI GAWTC 6 cut(s) 819, 993, 1071, 1090, 1430, 1598
Tru1I TTAA 7 cut(s) 258, 428, 576, 639, 678, 1548, 1692
Tru9I TTAA 7 cut(s) 258, 428, 576, 639, 678, 1548, 1692
TscAI CASTG 3 cut(s) 820, 1248, 1977
TspDTI ATGAA 5 cut(s) 560, 690, 968, 1319, 1941
TspGWI ACGGA 1 cut(s) 505
TspMI CCCGGG 1 cut(s) 457
TspRI CASTG 3 cut(s) 820, 1248, 1977
VpaK11BI GGWCC 3 cut(s) 263, 979, 1451
VspI ATTAAT 2 cut(s) 639, 1692
XapI RAATTY 1 cut(s) 935
XceI RCATGY 2 cut(s) 1204, 1611
XmaI CCCGGG 1 cut(s) 457
XmiI GTMKAC 1 cut(s) 351
XmnI GAANNNNTTC 3 cut(s) 935, 992, 1655
XspI CTAG 4 cut(s) 468, 597, 1094, 1683
ZraI GACGTC 1 cut(s) 235
ZrmI AGTACT 7 cut(s) 466, 472, 586, 601, 1556, 1681, 1687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.