Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0011818

Physical Location & Seq

Genomic Coordinates Reverse (-)

35161928 .. 35165889

Gene Structure 3962 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG211400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGCTGGGGGACTTGGGGAGCTCCTCCGACGCCACCACCGCCACCGCTATGGCCGCAGAACCCTTAGGGGCTCACGAAGGCGGTGGCGGTGATGGCGGTGTTGGCTCGAATTCGGGTGAAGAGGAGAAGAATAATTATAGCAGAAGTGGTGGCGGTGGTGGCGGTGGTGGTGGTGGTGGTGAGGAATTTGGTGATAGGAGCTTCGGTGGCAACCGGTGGCCTCGCCAAGAAACGTTGGCTCTCTTGAAGATTCGGTCTGACATGGACGTGGCGTTTCGTGATGCAAGTGTTAAAGGTCCATTATGGGAAGAAGTTTCCAGGAAGCTAGCAGAGCTTGGCTTTCATCGAAGCTCCAAGAAATGCAAGGAGAAATTCGAGAACGTCTACAAGTACCACAGGAGAACAAAAGAAGGTCGCACCGGGAAATCCGACGGCAAGACCTATCGGTTCTTCGATCAATTACAAGCCCTCGAAAATCAACCTCAAACTCCGACCACGCCCAACTCTACTACCACTCATCAACCGAGGCCACAACCCACAATTGCAATGGCAGTGTCAAACCCTCCTCCTATTCCTACAATTTCTCATATCAATAGTACCAGTACTAACAGTACTAATACTGTTCCATCAGCTGCACCACACCAAGGCATTGCAACACCAACAATTCCTAGTTCGTTATTCCCTCCAACAAACCCTACAATTTTCCCACCACCGCCACAGCCTCAGCCGCAACAAAACCCTACTTCTCACCATCAGCATCATCAGGCCACTACATTTGTTCCACCTTCTAGTTTGCCAAGCATATCATCGACCGATCTCATGTCGAATTCGACCTCTTCGTCCACCTCATCGGACGAAGAAATGGAAGGGCGGGCCAAGAGGAAGAGGAAGTGGAAGGACTTCTTCGAGACTCTGATGAAGGAGGTGGTCCGCAAGCAGGAAGATCTCCAGAAGAGGTTTCTGGAAGCCATCGAGAAGCGCGAGCAGGAGCGAATGGCCAGAGAAGAAGCTTGGAGACTGCAGGAGTTGGCCCGCATCAACCGCGAACGAGAGATTCTTGCCCAAGAACGCTCCATCGCCTCCGCCAAAGACACCGCCGTCATGTCTTTCTTGCAAAAAATAGCCGAACAGCAACCGCAGCATAACCCCCAGGCCACACCCACTAATCCTAATAACCATTTGCTGACGTCACAAACGCCACAGCCACAGCCACCGCCGGCGCAGCAATCAGTGGCTCTTCCTCCTCCACAACGGCAGCAGACTACACCACCACCGACACTGCAGTTATCACAAGCGCCGATCACGACTTTCGAGATTACTCCGAGAGCAAATGGTGAGAACAACAACAACAATAGTAATAATAATCTGGTAAGTCCTACTACTACGCCGAGCTCGTCGAGATGGCCGAAGGTGGAGGTACATTCACTTATCAAGCTAAGAAGAAGCCTGGATTCAAAGTACCAAGAGAACGGGCCCAAGGGACCGCTCTGGGAGGAGATATCGGGAGAGATGAAGAAGCTCGGGTACAACCGGAGCGCGAAGAGGTGCAAGGAGAAGTGGGAGAACATTAACAAGTACTTCAAGAAGGTCAAGGAGAGCAACAAGAAGAGGCCCGAGGATTCCAAGACGTGTCCTTACTTCCACCTCCTCGACAGTCTGTACAGAGAGAGGAACATCGGGAATAACAATGATAACAACAATAATTCACCAAAGCCGGAGAATGCGGCGCCGCTGATGGTGAGGCCGGAGCAGCAGTGGCAGCCTCCTAACCGGGTCGAACCGGAGATGGAGAGCGAGCGGATGGATCAAAACCATGAGGAAGAAGATAGGGATGGTGACGAAGACGAGGACGAGGACGAGGAGGAAGATGAGGGCAACTATGAGATAGTGGCAAACAAAGGAGCTTCAGTTTCAGTGGGAGCAACGACAGCTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_4

Protein Analysis

645

Amino Acids

71.84

Weight (kDa)

6.18

Isoelectric Point (pI)

66.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_4	PF13837	71 - 157	4.5e-22	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4	PF13837	466 - 553	1.7e-24	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011818)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76880
fragaria_vesca	FvH4_2g13850 FvH4_2g13850
malus_domestica	MD05G1024400.v1.1 MD10G1025100.v1.1
prunus_persica	Prupe.8G028700_v2.0.a1
pyrus_communis	pycom05g01550 pycom05g01560 pycom10g01650
rosa_chinensis	RchiOBHm_Chr6g0275541
rosa_laevigata	RLG00000013458
rosa_multiflora	Rmu_ssc0000162.1_g000013
rosa_roxburghii	Rroxscaffold_7G00193200
rosa_rugosa	Rorug06G0093800
rosa_samantha	Rh6AG206300 Rh6BG209200 Rh6CG211400 Rh6DG201800
rosa_wichuraiana	Rw6G017900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	838, 1097
AatII	GACGTC	1 cut(s)	1190
AccB1I	GGYRCC	1 cut(s)	1726
AccBSI	CCGCTC	2 cut(s)	1486, 1798
AccI	GTMKAC	1 cut(s)	384
AccII	CGCG	3 cut(s)	981, 1044, 1538
AclI	AACGTT	1 cut(s)	233
AclWI	GGATC	1 cut(s)	1812
AcoI	YGGCCR	3 cut(s)	51, 996, 1403
AcsI	RAATTY	4 cut(s)	109, 185, 371, 826
AcuI	CTGAAG	1 cut(s)	1890
AcyI	GRCGYC	3 cut(s)	30, 1187, 1727
AfaI	GTAC	9 cut(s)	392, 598, 604, 613, 1419, 1460, 1526, 1577, 1661
AfiI	CCNNNNNNNGG	2 cut(s)	644, 937
AflIII	ACRYGT	1 cut(s)	1628
AgeI	ACCGGT	1 cut(s)	213
AgsI	TTSAA	3 cut(s)	247, 1455, 1582
AjiI	CACGTC	2 cut(s)	268, 1629
AjnI	CCWGG	3 cut(s)	317, 1149, 1446
Alw21I	GWGCWC	2 cut(s)	23, 1394
Alw26I	GTCTC	2 cut(s)	902, 1009
AlwI	GGATC	1 cut(s)	1812
Ama87I	CYCGRG	2 cut(s)	1520, 1613
ApaI	GGGCCC	1 cut(s)	1476
ApeKI	GCWGC	6 cut(s)	632, 1138, 1222, 1255, 1750, 1759
ApoI	RAATTY	4 cut(s)	109, 185, 371, 826
AsiGI	ACCGGT	1 cut(s)	213
Asp700I	GAANNNNTTC	1 cut(s)	899
AspLEI	GCGC	5 cut(s)	981, 1222, 1297, 1538, 1729
AspS9I	GGNCC	8 cut(s)	296, 873, 928, 1030, 1472, 1473, 1481, 1611
AsuC2I	CCSGG	2 cut(s)	421, 1772
AsuHPI	GGTGA	9 cut(s)	101, 128, 191, 203, 740, 1346, 1698, 1750, 1847
AsuNHI	GCTAGC	1 cut(s)	325
AvaI	CYCGRG	2 cut(s)	1520, 1613
AvaII	GGWCC	3 cut(s)	296, 928, 1481
AxyI	CCTNAGG	1 cut(s)	64
BaeGI	GKGCMC	1 cut(s)	1476
BalI	TGGCCA	1 cut(s)	998
BanI	GGYRCC	1 cut(s)	1726
BanII	GRGCYC	4 cut(s)	23, 73, 1394, 1476
BarI	GAAGNNNNNNTAC	2 cut(s)	1508, 1540
BbsI	GAAGAC	1 cut(s)	1848
Bbv12I	GWGCWC	2 cut(s)	23, 1394
BbvCI	CCTCAGC	1 cut(s)	723
BbvI	GCAGC	6 cut(s)	619, 1150, 1234, 1267, 1762, 1771
BceAI	ACGGC	3 cut(s)	448, 1082, 1268
BciT130I	CCWGG	3 cut(s)	319, 1151, 1448
BcnI	CCSGG	2 cut(s)	421, 1772
BcoDI	GTCTC	2 cut(s)	902, 1009
BfaI	CTAG	3 cut(s)	326, 669, 789
BfmI	CTRYAG	2 cut(s)	1019, 1280
BfoI	RGCGCY	2 cut(s)	1298, 1730
BglII	AGATCT	1 cut(s)	943
BmcAI	AGTACT	3 cut(s)	604, 613, 1577
Bme1390I	CCNGG	5 cut(s)	319, 421, 1151, 1448, 1772
Bme18I	GGWCC	3 cut(s)	296, 928, 1481
BmeT110I	CYCGRG	2 cut(s)	1520, 1613
BmgBI	CACGTC	2 cut(s)	268, 1629
BmgT120I	GGNCC	8 cut(s)	296, 873, 928, 1030, 1472, 1473, 1481, 1611
BmiI	GGNNCC	3 cut(s)	1474, 1482, 1728
BmrFI	CCNGG	5 cut(s)	319, 421, 1151, 1448, 1772
BmsI	GCATC	3 cut(s)	271, 766, 1044
BmtI	GCTAGC	1 cut(s)	329
BpiI	GAAGAC	1 cut(s)	1848
BpmI	CTGGAG	1 cut(s)	932
Bpu10I	CCTNAGC	1 cut(s)	723
BpuMI	CCSGG	2 cut(s)	421, 1772
BsaHI	GRCGYC	3 cut(s)	30, 1187, 1727
BsaJI	CCNNGG	5 cut(s)	524, 643, 1149, 1476, 1614
BsaWI	WCCGGW	3 cut(s)	213, 1530, 1780
BsaXI	ACNNNNNCTCC	6 cut(s)	190, 220, 1739, 1769, 1893, 1923
Bsc4I	CCNNNNNNNGG	2 cut(s)	644, 937
Bse118I	RCCGGY	2 cut(s)	213, 1216
Bse1I	ACTGG	1 cut(s)	600
Bse21I	CCTNAGG	1 cut(s)	64
Bse3DI	GCAATG	2 cut(s)	552, 648
BseBI	CCWGG	3 cut(s)	319, 1151, 1448
BseDI	CCNNGG	5 cut(s)	524, 643, 1149, 1476, 1614
BseGI	GGATG	2 cut(s)	1806, 1837
BseLI	CCNNNNNNNGG	2 cut(s)	644, 937
BseMI	GCAATG	2 cut(s)	552, 648
BseMII	CTCAG	1 cut(s)	737
BseNI	ACTGG	1 cut(s)	600
BseRI	GAGGAG	7 cut(s)	13, 137, 555, 1233, 1508, 1637, 1874
BseSI	GKGCMC	1 cut(s)	1476
BseXI	GCAGC	6 cut(s)	619, 1150, 1234, 1267, 1762, 1771
BseYI	CCCAGC	1 cut(s)	4
BsgI	GTGCAG	1 cut(s)	618
Bsh1236I	CGCG	3 cut(s)	981, 1044, 1538
Bsh1285I	CGRYCG	1 cut(s)	813
BshNI	GGYRCC	1 cut(s)	1726
BshTI	ACCGGT	1 cut(s)	213
BsiEI	CGRYCG	1 cut(s)	813
BsiHKAI	GWGCWC	2 cut(s)	23, 1394
BsiHKCI	CYCGRG	2 cut(s)	1520, 1613
BsiSI	CCGG	8 cut(s)	214, 420, 1217, 1531, 1715, 1745, 1771, 1781
BslFI	GGGAC	2 cut(s)	23, 1494
BslI	CCNNNNNNNGG	2 cut(s)	644, 937
BsmAI	GTCTC	2 cut(s)	902, 1009
BsmFI	GGGAC	2 cut(s)	23, 1494
BsmI	GAATGC	1 cut(s)	1726
BsoBI	CYCGRG	2 cut(s)	1520, 1613
Bsp120I	GGGCCC	1 cut(s)	1472
Bsp1286I	GDGCHC	4 cut(s)	23, 73, 1394, 1476
Bsp1407I	TGTACA	1 cut(s)	1659
Bsp143I	GATC	5 cut(s)	454, 814, 943, 1299, 1804
BspCNI	CTCAG	1 cut(s)	736
BspFNI	CGCG	3 cut(s)	981, 1044, 1538
BspLI	GGNNCC	3 cut(s)	1474, 1482, 1728
BspMAI	CTGCAG	2 cut(s)	1023, 1284
BspOI	GCTAGC	1 cut(s)	329
BspPI	GGATC	1 cut(s)	1812
BspQI	GCTCTTC	1 cut(s)	1242
BspT107I	GGYRCC	1 cut(s)	1726
BsrBI	CCGCTC	2 cut(s)	1486, 1798
BsrDI	GCAATG	2 cut(s)	552, 648
BsrFI	RCCGGY	2 cut(s)	213, 1216
BsrGI	TGTACA	1 cut(s)	1659
BsrI	ACTGG	1 cut(s)	600
BssAI	RCCGGY	2 cut(s)	213, 1216
BssECI	CCNNGG	5 cut(s)	524, 643, 1149, 1476, 1614
BssMI	GATC	5 cut(s)	454, 814, 943, 1299, 1804
BssNI	GRCGYC	3 cut(s)	30, 1187, 1727
BssT1I	CCWWGG	2 cut(s)	643, 1476
Bst2UI	CCWGG	3 cut(s)	319, 1151, 1448
Bst4CI	ACNGT	3 cut(s)	611, 622, 1655
Bst6I	CTCTTC	7 cut(s)	114, 841, 878, 947, 1242, 1535, 1601
BstACI	GRCGYC	3 cut(s)	30, 1187, 1727
BstAUI	TGTACA	1 cut(s)	1659
BstC8I	GCNNGC	7 cut(s)	327, 873, 935, 983, 1033, 1218, 1796
BstDEI	CTNAG	4 cut(s)	64, 723, 1436, 1932
BstF5I	GGATG	2 cut(s)	1806, 1837
BstFNI	CGCG	3 cut(s)	981, 1044, 1538
BstH2I	RGCGCY	2 cut(s)	1298, 1730
BstHHI	GCGC	5 cut(s)	981, 1222, 1297, 1538, 1729
BstKTI	GATC	5 cut(s)	457, 817, 946, 1302, 1807
BstMAI	GTCTC	2 cut(s)	902, 1009
BstMBI	GATC	5 cut(s)	454, 814, 943, 1299, 1804
BstMCI	CGRYCG	1 cut(s)	813
BstNI	CCWGG	3 cut(s)	319, 1151, 1448
BstSCI	CCNGG	5 cut(s)	317, 419, 1149, 1446, 1770
BstSFI	CTRYAG	2 cut(s)	1019, 1280
BstSLI	GKGCMC	1 cut(s)	1476
BstUI	CGCG	3 cut(s)	981, 1044, 1538
BstV1I	GCAGC	6 cut(s)	619, 1150, 1234, 1267, 1762, 1771
BstV2I	GAAGAC	1 cut(s)	1848
BstX2I	RGATCY	1 cut(s)	943
BstXI	CCANNNNNNTGG	1 cut(s)	49
BstYI	RGATCY	1 cut(s)	943
Bsu36I	CCTNAGG	1 cut(s)	64
BtgZI	GCGATG	1 cut(s)	1060
BtrI	CACGTC	2 cut(s)	268, 1629
BtsCI	GGATG	2 cut(s)	1806, 1837
BtsI	GCAGTG	3 cut(s)	558, 1277, 1760
BtsIMutI	CAGTG	5 cut(s)	558, 1236, 1277, 1760, 1920
Cac8I	GCNNGC	7 cut(s)	327, 873, 935, 983, 1033, 1218, 1796
CfoI	GCGC	5 cut(s)	981, 1222, 1297, 1538, 1729
Cfr10I	RCCGGY	2 cut(s)	213, 1216
Cfr13I	GGNCC	8 cut(s)	296, 873, 928, 1030, 1472, 1473, 1481, 1611
CseI	GACGC	1 cut(s)	38
Csp6I	GTAC	9 cut(s)	391, 597, 603, 612, 1418, 1459, 1525, 1576, 1660
CspAI	ACCGGT	1 cut(s)	213
CspCI	CAANNNNNGTGG	2 cut(s)	757, 792
CviAII	CATG	4 cut(s)	262, 820, 1102, 1814
CviQI	GTAC	9 cut(s)	391, 597, 603, 612, 1418, 1459, 1525, 1576, 1660
DdeI	CTNAG	4 cut(s)	64, 723, 1436, 1932
DinI	GGCGCC	1 cut(s)	1728
DpnI	GATC	5 cut(s)	456, 816, 945, 1301, 1806
DpnII	GATC	5 cut(s)	454, 814, 943, 1299, 1804
DrdI	GACNNNNNNGTC	2 cut(s)	838, 1097
DseDI	GACNNNNNNGTC	2 cut(s)	838, 1097
EaeI	YGGCCR	3 cut(s)	51, 996, 1403
Eam1104I	CTCTTC	7 cut(s)	114, 841, 878, 947, 1242, 1535, 1601
EarI	CTCTTC	7 cut(s)	114, 841, 878, 947, 1242, 1535, 1601
EciI	GGCGGA	1 cut(s)	1072
Ecl136II	GAGCTC	2 cut(s)	21, 1392
Eco130I	CCWWGG	2 cut(s)	643, 1476
Eco24I	GRGCYC	4 cut(s)	23, 73, 1394, 1476
Eco32I	GATATC	1 cut(s)	1500
Eco47I	GGWCC	3 cut(s)	296, 928, 1481
Eco53kI	GAGCTC	2 cut(s)	21, 1392
Eco57I	CTGAAG	1 cut(s)	1890
Eco81I	CCTNAGG	1 cut(s)	64
Eco88I	CYCGRG	2 cut(s)	1520, 1613
EcoICRI	GAGCTC	2 cut(s)	21, 1392
EcoRI	GAATTC	2 cut(s)	109, 826
EcoRII	CCWGG	3 cut(s)	317, 1149, 1446
EcoRV	GATATC	1 cut(s)	1500
EcoT14I	CCWWGG	2 cut(s)	643, 1476
EcoT38I	GRGCYC	4 cut(s)	23, 73, 1394, 1476
EgeI	GGCGCC	1 cut(s)	1728
EheI	GGCGCC	1 cut(s)	1728
ErhI	CCWWGG	2 cut(s)	643, 1476
FaeI	CATG	4 cut(s)	265, 823, 1105, 1817
FalI	AAGNNNNNCTT	2 cut(s)	887, 919
FaqI	GGGAC	2 cut(s)	23, 1494
FatI	CATG	4 cut(s)	261, 819, 1101, 1813
FauI	CCCGC	2 cut(s)	864, 1040
FblI	GTMKAC	1 cut(s)	384
FokI	GGATG	2 cut(s)	1813, 1844
FriOI	GRGCYC	4 cut(s)	23, 73, 1394, 1476
FspBI	CTAG	3 cut(s)	326, 669, 789
GlaI	GCGC	5 cut(s)	980, 1221, 1296, 1537, 1728
GsaI	CCCAGC	1 cut(s)	8
GsuI	CTGGAG	1 cut(s)	932
HaeII	RGCGCY	2 cut(s)	1298, 1730
HapII	CCGG	8 cut(s)	214, 420, 1217, 1531, 1715, 1745, 1771, 1781
HgaI	GACGC	1 cut(s)	38
HhaI	GCGC	5 cut(s)	981, 1222, 1297, 1538, 1729
Hin1I	GRCGYC	3 cut(s)	30, 1187, 1727
Hin1II	CATG	4 cut(s)	265, 823, 1105, 1817
Hin6I	GCGC	5 cut(s)	979, 1220, 1295, 1536, 1727
HinP1I	GCGC	5 cut(s)	979, 1220, 1295, 1536, 1727
HindIII	AAGCTT	1 cut(s)	1008
HinfI	GANTC	5 cut(s)	250, 910, 1054, 1451, 1619
HpaII	CCGG	8 cut(s)	214, 420, 1217, 1531, 1715, 1745, 1771, 1781
HphI	GGTGA	9 cut(s)	101, 128, 191, 203, 740, 1346, 1698, 1750, 1847
Hpy166II	GTNNAC	2 cut(s)	385, 843
Hpy188I	TCNGA	7 cut(s)	28, 259, 430, 492, 853, 915, 1323
Hpy8I	GTNNAC	2 cut(s)	385, 843
Hpy99I	CGWCG	3 cut(s)	32, 434, 1399
HpyAV	CCTTC	8 cut(s)	71, 404, 795, 860, 889, 913, 1402, 1579
HpyCH4III	ACNGT	3 cut(s)	611, 622, 1655
HpyCH4IV	ACGT	5 cut(s)	233, 267, 381, 1187, 1628
HpyCH4V	TGCA	9 cut(s)	284, 363, 545, 635, 653, 1021, 1114, 1282, 1548
HpyF3I	CTNAG	4 cut(s)	64, 723, 1436, 1932
HpySE526I	ACGT	5 cut(s)	233, 267, 381, 1187, 1628
Hsp92I	GRCGYC	3 cut(s)	30, 1187, 1727
Hsp92II	CATG	4 cut(s)	265, 823, 1105, 1817
HspAI	GCGC	5 cut(s)	979, 1220, 1295, 1536, 1727
KasI	GGCGCC	1 cut(s)	1726
KroI	GCCGGC	1 cut(s)	1216
KroNI	GCCGGC	1 cut(s)	1218
Kzo9I	GATC	5 cut(s)	454, 814, 943, 1299, 1804
LguI	GCTCTTC	1 cut(s)	1242
Lsp1109I	GCAGC	6 cut(s)	619, 1150, 1234, 1267, 1762, 1771
LweI	GCATC	3 cut(s)	271, 766, 1044
MaeI	CTAG	3 cut(s)	326, 669, 789
MaeII	ACGT	5 cut(s)	233, 267, 381, 1187, 1628
MaeIII	GTNAC	2 cut(s)	1188, 1835
MalI	GATC	5 cut(s)	456, 816, 945, 1301, 1806
MbiI	CCGCTC	2 cut(s)	1486, 1798
MboI	GATC	5 cut(s)	454, 814, 943, 1299, 1804
MfeI	CAATTG	1 cut(s)	540
MflI	RGATCY	1 cut(s)	943
MhlI	GDGCHC	4 cut(s)	23, 73, 1394, 1476
MlsI	TGGCCA	1 cut(s)	998
MluNI	TGGCCA	1 cut(s)	998
Mly113I	GGCGCC	1 cut(s)	1727
MlyI	GAGTC	1 cut(s)	904
MmeI	TCCRAC	4 cut(s)	51, 453, 515, 710
Mox20I	TGGCCA	1 cut(s)	998
MreI	CGCCGGCG	1 cut(s)	1216
MroNI	GCCGGC	1 cut(s)	1216
MroXI	GAANNNNTTC	1 cut(s)	899
MscI	TGGCCA	1 cut(s)	998
MseI	TTAA	2 cut(s)	291, 1569
MslI	CAYNNNNRTG	2 cut(s)	47, 266
Msp20I	TGGCCA	1 cut(s)	998
MspA1I	CMGCKG	2 cut(s)	632, 1732
MspI	CCGG	8 cut(s)	214, 420, 1217, 1531, 1715, 1745, 1771, 1781
MspR9I	CCNGG	5 cut(s)	319, 421, 1151, 1448, 1772
MunI	CAATTG	1 cut(s)	540
Mva1269I	GAATGC	1 cut(s)	1726
MvaI	CCWGG	3 cut(s)	319, 1151, 1448
MvnI	CGCG	3 cut(s)	981, 1044, 1538
NaeI	GCCGGC	1 cut(s)	1218
NarI	GGCGCC	1 cut(s)	1727
NciI	CCSGG	2 cut(s)	421, 1772
NdeII	GATC	5 cut(s)	454, 814, 943, 1299, 1804
NgoMIV	GCCGGC	1 cut(s)	1216
NheI	GCTAGC	1 cut(s)	325
NlaIII	CATG	4 cut(s)	265, 823, 1105, 1817
NlaIV	GGNNCC	3 cut(s)	1474, 1482, 1728
NmeAIII	GCCGAG	1 cut(s)	1413
NmuCI	GTSAC	2 cut(s)	1188, 1835
PciSI	GCTCTTC	1 cut(s)	1242
PcsI	WCGNNNNNNNCGW	4 cut(s)	836, 978, 1391, 1403
PctI	GAATGC	1 cut(s)	1726
PdiI	GCCGGC	1 cut(s)	1218
PdmI	GAANNNNTTC	1 cut(s)	899
PfeI	GAWTC	4 cut(s)	250, 1054, 1451, 1619
PfoI	TCCNGGA	1 cut(s)	317
PinAI	ACCGGT	1 cut(s)	213
PleI	GAGTC	1 cut(s)	904
PluTI	GGCGCC	1 cut(s)	1730
PpsI	GAGTC	1 cut(s)	904
Psp124BI	GAGCTC	2 cut(s)	23, 1394
Psp1406I	AACGTT	1 cut(s)	233
Psp6I	CCWGG	3 cut(s)	317, 1149, 1446
PspFI	CCCAGC	1 cut(s)	4
PspGI	CCWGG	3 cut(s)	317, 1149, 1446
PspN4I	GGNNCC	3 cut(s)	1474, 1482, 1728
PspOMI	GGGCCC	1 cut(s)	1472
PspPI	GGNCC	8 cut(s)	296, 873, 928, 1030, 1472, 1473, 1481, 1611
PstI	CTGCAG	2 cut(s)	1023, 1284
PsuI	RGATCY	1 cut(s)	943
PvuII	CAGCTG	1 cut(s)	632
RsaI	GTAC	9 cut(s)	392, 598, 604, 613, 1419, 1460, 1526, 1577, 1661
RsaNI	GTAC	9 cut(s)	391, 597, 603, 612, 1418, 1459, 1525, 1576, 1660
RseI	CAYNNNNRTG	2 cut(s)	47, 266
SacI	GAGCTC	2 cut(s)	23, 1394
SapI	GCTCTTC	1 cut(s)	1242
SaqAI	TTAA	2 cut(s)	291, 1569
Sau3AI	GATC	5 cut(s)	454, 814, 943, 1299, 1804
Sau96I	GGNCC	8 cut(s)	296, 873, 928, 1030, 1472, 1473, 1481, 1611
ScaI	AGTACT	3 cut(s)	604, 613, 1577
SchI	GAGTC	1 cut(s)	904
ScrFI	CCNGG	5 cut(s)	319, 421, 1151, 1448, 1772
SduI	GDGCHC	4 cut(s)	23, 73, 1394, 1476
SfaNI	GCATC	3 cut(s)	271, 766, 1044
SfcI	CTRYAG	2 cut(s)	1019, 1280
SfoI	GGCGCC	1 cut(s)	1728
SgrAI	CRCCGGYG	1 cut(s)	1216
SinI	GGWCC	3 cut(s)	296, 928, 1481
SmiMI	CAYNNNNRTG	2 cut(s)	47, 266
SspDI	GGCGCC	1 cut(s)	1726
SspMI	CTAG	3 cut(s)	326, 669, 789
SstI	GAGCTC	2 cut(s)	23, 1394
StyD4I	CCNGG	5 cut(s)	317, 419, 1149, 1446, 1770
StyI	CCWWGG	2 cut(s)	643, 1476
TaaI	ACNGT	3 cut(s)	611, 622, 1655
TaiI	ACGT	5 cut(s)	236, 270, 384, 1190, 1631
TaqII	GACCGA	2 cut(s)	243, 827
TatI	WGTACW	4 cut(s)	602, 611, 1575, 1659
TauI	GCSGC	4 cut(s)	56, 730, 1727, 1732
TfiI	GAWTC	4 cut(s)	250, 1054, 1451, 1619
Tru1I	TTAA	2 cut(s)	291, 1569
Tru9I	TTAA	2 cut(s)	291, 1569
TscAI	CASTG	5 cut(s)	558, 1236, 1284, 1760, 1920
TseFI	GTSAC	2 cut(s)	1188, 1835
TseI	GCWGC	6 cut(s)	632, 1138, 1222, 1255, 1750, 1759
Tsp45I	GTSAC	2 cut(s)	1188, 1835
TspDTI	ATGAA	3 cut(s)	332, 932, 1526
TspRI	CASTG	5 cut(s)	558, 1236, 1284, 1760, 1920
VpaK11BI	GGWCC	3 cut(s)	296, 928, 1481
XapI	RAATTY	4 cut(s)	109, 185, 371, 826
XcmI	CCANNNNNNNNNTGG	1 cut(s)	544
XmiI	GTMKAC	1 cut(s)	384
XmnI	GAANNNNTTC	1 cut(s)	899
XspI	CTAG	3 cut(s)	326, 669, 789
ZraI	GACGTC	1 cut(s)	1188
ZrmI	AGTACT	3 cut(s)	604, 613, 1577

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.