RLG00000013458
MYB Family

Trihelix transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0011818
Physical Location & Seq
Forward (+)
31748490 .. 31751161
2672 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013458

Sequence Viewer

Length: 1941 bp
ATGCTGGGGGACTTGGGGAGCTCCTCCGACGCCACCACCGCCACCGCTATGGCCGCAGAACCCTTAGGGGCTCACGAAGGCGGTGGCGGTGATGGCGGTGTTGGCTCGAATTCGGGTGAAGAGGAGAAGAATAATTATAGCAGAAGCGGTGGCGGTGGTGGTGGTGAGGAATTTGGTGATAGGAGCTTCGGTGGCAACCGGTGGCCTCGCCAAGAAACGTTGGCTCTCTTGAAGATTCGGTCTGACATGGACGTGGTGTTTCGTGATGCAAGTGTTAAAGGTCCATTATGGGATGAAGTTTCCAGGAAGCTAGCAGAGCTTGGCTTTCATCGAAGCGCCAAGAAATGCAAGGAGAAATTCGAGAACGTCTACAAGTACCACAGGAGAACAAAAGAAGGCCGCACCGGGAAATCCGACGGCAAGACCTATCGGTTCTTCGATCAATTACAAGCCCTCGAAAATCAACCTCAAACTCCGACCACGCCCAACTCTACTATCACTCATCAACCGAGGCCACAACCCACAATTGCAATGGCAGTGTCAAACCCTCCTCCTCTTCCTACAATTTCTCATATCAATAGTACCAGTACTAACAGTACTAATACTGTTCCATCAGCTGCACCACACCAAGGCATTGCAACACCAACAATTCCTAGTTCGTTATTCCCTCCAACAAACCCTATAATTTTCCCACCACCGCCACAGCCTCCGCCGCAACAAAACCCTACTTCTCACCATCAGCATCATCAGGCCACTACATTTGTTCCACCTTCTAGTTTGCCAAGCATATCATCTACCGATCTCATGTCGAATTCAACCTCTTCGTCCACTTCATCGGACGAAGAAATGGAAGGGCGGGCCAAGAGGAAGAGGAAGTGGAAGGACTTCTTTGAGACTCTGATGAAGGAGGTGGTCCGCAAGCAGGAAGATCTCCAGAAGAGGTTTCTGGAAGCCATCGAGAAGCGCGAGCAGGAGCGAATGGCGAGAGAAGAAGCTTGGAGACTGGAGGAGATGGCCCGCATCAAACGCGAACGAGAGATTCTTGACAGAGAACGCTCCATCGCCGCGGCCAAAGACACCGCCGTCATGTCCTTCTTGCAAAAAATAGCCGAACAGCAACCGCAGCATAGCCCCCAAGCCACACCCACTAATCCTAATAACCATTTGCTGACGTCACAAACGCCACAGCCACAGCCACAGCCACCGCCGGCGCAGCAATCAGTGGCTCCTCCTCCTCCACAACGGCAGCAGACTACACCACCACCGACACTGCAGATATCACAAGCGCCGATCACGACTTTCGAGATTACTCCGAGAGCAAATGGTGAGAACAACAGCAATAGTAATAACAATATGGTAAGTCCTACTACTACGCCGAGCTCGTCGAGATGGCCGAAAGTGGAGGTACATTCACTTATCAAGCTAAGAAGAAGCCTGGATTCAAAGTACCAAGAGAACGGGCCCAAGGGACCGCTCTGGGAGGAGATATCGGGAGAGATGAAGAAGCTCGGGTACAACCGGAGCGCGAAGAGGTGCAAGGAGAAGTGGGAGAACATTAACAAGTACTTCAAGAAGGTCAAGGAGAGCAACAAGAAGAGGCCCGAGGATTCCAAGACGTGTCCTTACTTCCACCTCCTCGACAGTCTGTACAGAGAGAGGAACATGGGGAATAACAATAATGATAACAACAATAATTCACGAAAGCCGGAGAATGCGGCGCCGCTGATGGTGAGGCCGGAGCAGCAGTGGCAGCCTCCGAACCGGGTCGAACCGGAGATGGAGAGCGAGCGGATGGATCAAAACCATGAGGAAGAAGATAGGGATGGTGACGGAGACGAGGACGAGGACGAGGACGAGGAGGAAGATGAGGGCAACTATGAGATAGTGGCAAACAAAGGAGCTTCAGTTTCAGTTTCAGTGGGAGCAACGACAGCTCAGTGA

Protein Analysis

647

Amino Acids

72.25

Weight (kDa)

6.18

Isoelectric Point (pI)

65.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_4 PF13837 66 - 152 9.6e-22 Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4 PF13837 462 - 549 1.7e-24 Myb/SANT-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011818)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76880
fragaria_vesca FvH4_2g13850 FvH4_2g13850
malus_domestica MD05G1024400.v1.1 MD10G1025100.v1.1
prunus_persica Prupe.8G028700_v2.0.a1
pyrus_communis pycom05g01550 pycom05g01560 pycom10g01650
rosa_chinensis RchiOBHm_Chr6g0275541
rosa_laevigata RLG00000013458
rosa_multiflora Rmu_ssc0000162.1_g000013
rosa_roxburghii Rroxscaffold_7G00193200
rosa_rugosa Rorug06G0093800
rosa_samantha Rh6AG206300 Rh6BG209200 Rh6CG211400 Rh6DG201800
rosa_wichuraiana Rw6G017900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1082
AatII GACGTC 1 cut(s) 1175
AccB1I GGYRCC 1 cut(s) 1717
AccBSI CCGCTC 2 cut(s) 1474, 1789
AccI GTMKAC 1 cut(s) 369
AccII CGCG 4 cut(s) 966, 1029, 1067, 1526
AclI AACGTT 1 cut(s) 218
AclWI GGATC 1 cut(s) 1803
AcoI YGGCCR 3 cut(s) 51, 1068, 1391
AcsI RAATTY 4 cut(s) 109, 170, 356, 811
AcuI CTGAAG 1 cut(s) 1887
AcyI GRCGYC 3 cut(s) 30, 1172, 1718
AfaI GTAC 9 cut(s) 377, 583, 589, 598, 1407, 1448, 1514, 1565, 1649
AfiI CCNNNNNNNGG 2 cut(s) 629, 922
AflIII ACRYGT 1 cut(s) 1616
AgeI ACCGGT 1 cut(s) 198
AgsI TTSAA 4 cut(s) 232, 816, 1443, 1570
AjiI CACGTC 2 cut(s) 253, 1617
AjnI CCWGG 2 cut(s) 302, 1434
Alw21I GWGCWC 2 cut(s) 23, 1382
Alw26I GTCTC 3 cut(s) 887, 994, 1827
AlwI GGATC 1 cut(s) 1803
Ama87I CYCGRG 2 cut(s) 1508, 1601
ApaI GGGCCC 1 cut(s) 1464
ApeKI GCWGC 6 cut(s) 617, 1123, 1213, 1246, 1741, 1750
ApoI RAATTY 4 cut(s) 109, 170, 356, 811
AsiGI ACCGGT 1 cut(s) 198
Asp700I GAANNNNTTC 1 cut(s) 884
AspLEI GCGC 6 cut(s) 338, 966, 1213, 1288, 1526, 1720
AspS9I GGNCC 8 cut(s) 281, 858, 913, 1015, 1460, 1461, 1469, 1599
AsuC2I CCSGG 2 cut(s) 406, 1763
AsuHPI GGTGA 8 cut(s) 101, 128, 176, 188, 725, 1337, 1741, 1838
AsuNHI GCTAGC 1 cut(s) 310
AvaI CYCGRG 2 cut(s) 1508, 1601
AvaII GGWCC 3 cut(s) 281, 913, 1469
AxyI CCTNAGG 1 cut(s) 64
BaeGI GKGCMC 1 cut(s) 1464
BanI GGYRCC 1 cut(s) 1717
BanII GRGCYC 4 cut(s) 23, 73, 1382, 1464
BarI GAAGNNNNNNTAC 2 cut(s) 1496, 1528
Bbv12I GWGCWC 2 cut(s) 23, 1382
BbvI GCAGC 6 cut(s) 604, 1135, 1225, 1258, 1753, 1762
BceAI ACGGC 3 cut(s) 433, 1067, 1259
BciT130I CCWGG 2 cut(s) 304, 1436
BcnI CCSGG 2 cut(s) 406, 1763
BcoDI GTCTC 3 cut(s) 887, 994, 1827
BfaI CTAG 3 cut(s) 311, 654, 774
BfmI CTRYAG 1 cut(s) 1271
BfoI RGCGCY 3 cut(s) 339, 1289, 1721
BglII AGATCT 1 cut(s) 928
BmcAI AGTACT 3 cut(s) 589, 598, 1565
Bme1390I CCNGG 4 cut(s) 304, 406, 1436, 1763
Bme18I GGWCC 3 cut(s) 281, 913, 1469
BmeT110I CYCGRG 2 cut(s) 1508, 1601
BmgBI CACGTC 2 cut(s) 253, 1617
BmgT120I GGNCC 8 cut(s) 281, 858, 913, 1015, 1460, 1461, 1469, 1599
BmiI GGNNCC 4 cut(s) 1227, 1462, 1470, 1719
BmrFI CCNGG 4 cut(s) 304, 406, 1436, 1763
BmsI GCATC 3 cut(s) 256, 751, 1029
BmtI GCTAGC 1 cut(s) 314
BpmI CTGGAG 2 cut(s) 917, 1025
BpuMI CCSGG 2 cut(s) 406, 1763
BsaHI GRCGYC 3 cut(s) 30, 1172, 1718
BsaJI CCNNGG 5 cut(s) 509, 628, 1065, 1464, 1602
BsaWI WCCGGW 3 cut(s) 198, 1518, 1771
BsaXI ACNNNNNCTCC 6 cut(s) 175, 205, 1730, 1760, 1890, 1920
Bsc4I CCNNNNNNNGG 2 cut(s) 629, 922
Bse118I RCCGGY 2 cut(s) 198, 1207
Bse1I ACTGG 2 cut(s) 585, 1008
Bse21I CCTNAGG 1 cut(s) 64
Bse3DI GCAATG 2 cut(s) 537, 633
BseBI CCWGG 2 cut(s) 304, 1436
BseDI CCNNGG 5 cut(s) 509, 628, 1065, 1464, 1602
BseGI GGATG 3 cut(s) 298, 1797, 1828
BseLI CCNNNNNNNGG 2 cut(s) 629, 922
BseMI GCAATG 2 cut(s) 537, 633
BseNI ACTGG 2 cut(s) 585, 1008
BseSI GKGCMC 1 cut(s) 1464
BseXI GCAGC 6 cut(s) 604, 1135, 1225, 1258, 1753, 1762
BseYI CCCAGC 1 cut(s) 4
BsgI GTGCAG 1 cut(s) 603
Bsh1236I CGCG 4 cut(s) 966, 1029, 1067, 1526
BshNI GGYRCC 1 cut(s) 1717
BshTI ACCGGT 1 cut(s) 198
BsiHKAI GWGCWC 2 cut(s) 23, 1382
BsiHKCI CYCGRG 2 cut(s) 1508, 1601
BsiSI CCGG 8 cut(s) 199, 405, 1208, 1519, 1706, 1736, 1762, 1772
BslFI GGGAC 2 cut(s) 23, 1482
BslI CCNNNNNNNGG 2 cut(s) 629, 922
BsmAI GTCTC 3 cut(s) 887, 994, 1827
BsmBI CGTCTC 1 cut(s) 1827
BsmFI GGGAC 2 cut(s) 23, 1482
BsmI GAATGC 1 cut(s) 1717
BsoBI CYCGRG 2 cut(s) 1508, 1601
Bsp120I GGGCCC 1 cut(s) 1460
Bsp1286I GDGCHC 4 cut(s) 23, 73, 1382, 1464
Bsp1407I TGTACA 1 cut(s) 1647
Bsp143I GATC 5 cut(s) 439, 799, 928, 1290, 1795
BspFNI CGCG 4 cut(s) 966, 1029, 1067, 1526
BspLI GGNNCC 4 cut(s) 1227, 1462, 1470, 1719
BspMAI CTGCAG 1 cut(s) 1275
BspOI GCTAGC 1 cut(s) 314
BspPI GGATC 1 cut(s) 1803
BspT107I GGYRCC 1 cut(s) 1717
BsrBI CCGCTC 2 cut(s) 1474, 1789
BsrDI GCAATG 2 cut(s) 537, 633
BsrFI RCCGGY 2 cut(s) 198, 1207
BsrGI TGTACA 1 cut(s) 1647
BsrI ACTGG 2 cut(s) 585, 1008
BssAI RCCGGY 2 cut(s) 198, 1207
BssECI CCNNGG 5 cut(s) 509, 628, 1065, 1464, 1602
BssMI GATC 5 cut(s) 439, 799, 928, 1290, 1795
BssNI GRCGYC 3 cut(s) 30, 1172, 1718
BssT1I CCWWGG 2 cut(s) 628, 1464
Bst2UI CCWGG 2 cut(s) 304, 1436
Bst4CI ACNGT 3 cut(s) 596, 607, 1643
Bst6I CTCTTC 7 cut(s) 114, 561, 826, 863, 932, 1523, 1589
BstACI GRCGYC 3 cut(s) 30, 1172, 1718
BstAUI TGTACA 1 cut(s) 1647
BstC8I GCNNGC 7 cut(s) 312, 858, 920, 968, 1018, 1209, 1787
BstDEI CTNAG 3 cut(s) 64, 1424, 1935
BstDSI CCRYGG 1 cut(s) 1065
BstF5I GGATG 3 cut(s) 298, 1797, 1828
BstFNI CGCG 4 cut(s) 966, 1029, 1067, 1526
BstH2I RGCGCY 3 cut(s) 339, 1289, 1721
BstHHI GCGC 6 cut(s) 338, 966, 1213, 1288, 1526, 1720
BstKTI GATC 5 cut(s) 442, 802, 931, 1293, 1798
BstMAI GTCTC 3 cut(s) 887, 994, 1827
BstMBI GATC 5 cut(s) 439, 799, 928, 1290, 1795
BstNI CCWGG 2 cut(s) 304, 1436
BstSCI CCNGG 4 cut(s) 302, 404, 1434, 1761
BstSFI CTRYAG 1 cut(s) 1271
BstSLI GKGCMC 1 cut(s) 1464
BstUI CGCG 4 cut(s) 966, 1029, 1067, 1526
BstV1I GCAGC 6 cut(s) 604, 1135, 1225, 1258, 1753, 1762
BstX2I RGATCY 1 cut(s) 928
BstXI CCANNNNNNTGG 1 cut(s) 49
BstYI RGATCY 1 cut(s) 928
Bsu36I CCTNAGG 1 cut(s) 64
BtgI CCRYGG 1 cut(s) 1065
BtgZI GCGATG 1 cut(s) 1045
BtrI CACGTC 2 cut(s) 253, 1617
BtsCI GGATG 3 cut(s) 298, 1797, 1828
BtsI GCAGTG 3 cut(s) 543, 1268, 1751
BtsIMutI CAGTG 5 cut(s) 543, 1227, 1268, 1751, 1923
Cac8I GCNNGC 7 cut(s) 312, 858, 920, 968, 1018, 1209, 1787
CfoI GCGC 6 cut(s) 338, 966, 1213, 1288, 1526, 1720
Cfr10I RCCGGY 2 cut(s) 198, 1207
Cfr13I GGNCC 8 cut(s) 281, 858, 913, 1015, 1460, 1461, 1469, 1599
Cfr42I CCGCGG 1 cut(s) 1068
CseI GACGC 1 cut(s) 38
Csp6I GTAC 9 cut(s) 376, 582, 588, 597, 1406, 1447, 1513, 1564, 1648
CspAI ACCGGT 1 cut(s) 198
CspCI CAANNNNNGTGG 2 cut(s) 742, 777
CviAII CATG 5 cut(s) 247, 805, 1087, 1663, 1805
CviQI GTAC 9 cut(s) 376, 582, 588, 597, 1406, 1447, 1513, 1564, 1648
DdeI CTNAG 3 cut(s) 64, 1424, 1935
DinI GGCGCC 1 cut(s) 1719
DpnI GATC 5 cut(s) 441, 801, 930, 1292, 1797
DpnII GATC 5 cut(s) 439, 799, 928, 1290, 1795
DrdI GACNNNNNNGTC 1 cut(s) 1082
DseDI GACNNNNNNGTC 1 cut(s) 1082
EaeI YGGCCR 3 cut(s) 51, 1068, 1391
Eam1104I CTCTTC 7 cut(s) 114, 561, 826, 863, 932, 1523, 1589
EarI CTCTTC 7 cut(s) 114, 561, 826, 863, 932, 1523, 1589
EciI GGCGGA 1 cut(s) 699
Ecl136II GAGCTC 2 cut(s) 21, 1380
Eco130I CCWWGG 2 cut(s) 628, 1464
Eco24I GRGCYC 4 cut(s) 23, 73, 1382, 1464
Eco32I GATATC 2 cut(s) 1278, 1488
Eco47I GGWCC 3 cut(s) 281, 913, 1469
Eco53kI GAGCTC 2 cut(s) 21, 1380
Eco57I CTGAAG 1 cut(s) 1887
Eco81I CCTNAGG 1 cut(s) 64
Eco88I CYCGRG 2 cut(s) 1508, 1601
EcoICRI GAGCTC 2 cut(s) 21, 1380
EcoRI GAATTC 2 cut(s) 109, 811
EcoRII CCWGG 2 cut(s) 302, 1434
EcoRV GATATC 2 cut(s) 1278, 1488
EcoT14I CCWWGG 2 cut(s) 628, 1464
EcoT38I GRGCYC 4 cut(s) 23, 73, 1382, 1464
EgeI GGCGCC 1 cut(s) 1719
EheI GGCGCC 1 cut(s) 1719
ErhI CCWWGG 2 cut(s) 628, 1464
Esp3I CGTCTC 1 cut(s) 1827
FaeI CATG 5 cut(s) 250, 808, 1090, 1666, 1808
FalI AAGNNNNNCTT 2 cut(s) 872, 904
FaqI GGGAC 2 cut(s) 23, 1482
FatI CATG 5 cut(s) 246, 804, 1086, 1662, 1804
FauI CCCGC 2 cut(s) 849, 1025
FblI GTMKAC 1 cut(s) 369
FokI GGATG 3 cut(s) 305, 1804, 1835
FriOI GRGCYC 4 cut(s) 23, 73, 1382, 1464
FspBI CTAG 3 cut(s) 311, 654, 774
GlaI GCGC 6 cut(s) 337, 965, 1212, 1287, 1525, 1719
GsaI CCCAGC 1 cut(s) 8
GsuI CTGGAG 2 cut(s) 917, 1025
HaeII RGCGCY 3 cut(s) 339, 1289, 1721
HapII CCGG 8 cut(s) 199, 405, 1208, 1519, 1706, 1736, 1762, 1772
HgaI GACGC 1 cut(s) 38
HhaI GCGC 6 cut(s) 338, 966, 1213, 1288, 1526, 1720
Hin1I GRCGYC 3 cut(s) 30, 1172, 1718
Hin1II CATG 5 cut(s) 250, 808, 1090, 1666, 1808
Hin6I GCGC 6 cut(s) 336, 964, 1211, 1286, 1524, 1718
HinP1I GCGC 6 cut(s) 336, 964, 1211, 1286, 1524, 1718
HindIII AAGCTT 1 cut(s) 993
HinfI GANTC 5 cut(s) 235, 895, 1039, 1439, 1607
HpaII CCGG 8 cut(s) 199, 405, 1208, 1519, 1706, 1736, 1762, 1772
HphI GGTGA 8 cut(s) 101, 128, 176, 188, 725, 1337, 1741, 1838
Hpy166II GTNNAC 2 cut(s) 370, 828
Hpy188I TCNGA 8 cut(s) 28, 244, 415, 477, 838, 900, 1314, 1758
Hpy8I GTNNAC 2 cut(s) 370, 828
Hpy99I CGWCG 3 cut(s) 32, 419, 1387
HpyAV CCTTC 8 cut(s) 71, 389, 780, 845, 874, 898, 1102, 1567
HpyCH4III ACNGT 3 cut(s) 596, 607, 1643
HpyCH4IV ACGT 5 cut(s) 218, 252, 366, 1172, 1616
HpyCH4V TGCA 8 cut(s) 269, 348, 530, 620, 638, 1099, 1273, 1536
HpyF3I CTNAG 3 cut(s) 64, 1424, 1935
HpySE526I ACGT 5 cut(s) 218, 252, 366, 1172, 1616
Hsp92I GRCGYC 3 cut(s) 30, 1172, 1718
Hsp92II CATG 5 cut(s) 250, 808, 1090, 1666, 1808
HspAI GCGC 6 cut(s) 336, 964, 1211, 1286, 1524, 1718
KasI GGCGCC 1 cut(s) 1717
KroI GCCGGC 1 cut(s) 1207
KroNI GCCGGC 1 cut(s) 1209
KspI CCGCGG 1 cut(s) 1068
Kzo9I GATC 5 cut(s) 439, 799, 928, 1290, 1795
Lsp1109I GCAGC 6 cut(s) 604, 1135, 1225, 1258, 1753, 1762
LweI GCATC 3 cut(s) 256, 751, 1029
MaeI CTAG 3 cut(s) 311, 654, 774
MaeII ACGT 5 cut(s) 218, 252, 366, 1172, 1616
MaeIII GTNAC 2 cut(s) 1173, 1826
MalI GATC 5 cut(s) 441, 801, 930, 1292, 1797
MbiI CCGCTC 2 cut(s) 1474, 1789
MboI GATC 5 cut(s) 439, 799, 928, 1290, 1795
MfeI CAATTG 1 cut(s) 525
MflI RGATCY 1 cut(s) 928
MhlI GDGCHC 4 cut(s) 23, 73, 1382, 1464
Mly113I GGCGCC 1 cut(s) 1718
MlyI GAGTC 1 cut(s) 889
MmeI TCCRAC 4 cut(s) 51, 438, 500, 695
MreI CGCCGGCG 1 cut(s) 1207
MroNI GCCGGC 1 cut(s) 1207
MroXI GAANNNNTTC 1 cut(s) 884
MseI TTAA 2 cut(s) 276, 1557
MslI CAYNNNNRTG 2 cut(s) 47, 251
MspA1I CMGCKG 3 cut(s) 617, 1067, 1723
MspI CCGG 8 cut(s) 199, 405, 1208, 1519, 1706, 1736, 1762, 1772
MspR9I CCNGG 4 cut(s) 304, 406, 1436, 1763
MunI CAATTG 1 cut(s) 525
Mva1269I GAATGC 1 cut(s) 1717
MvaI CCWGG 2 cut(s) 304, 1436
MvnI CGCG 4 cut(s) 966, 1029, 1067, 1526
NaeI GCCGGC 1 cut(s) 1209
NarI GGCGCC 1 cut(s) 1718
NciI CCSGG 2 cut(s) 406, 1763
NdeII GATC 5 cut(s) 439, 799, 928, 1290, 1795
NgoMIV GCCGGC 1 cut(s) 1207
NheI GCTAGC 1 cut(s) 310
NlaIII CATG 5 cut(s) 250, 808, 1090, 1666, 1808
NlaIV GGNNCC 4 cut(s) 1227, 1462, 1470, 1719
NmeAIII GCCGAG 1 cut(s) 1401
NmuCI GTSAC 2 cut(s) 1173, 1826
PcsI WCGNNNNNNNCGW 3 cut(s) 963, 1379, 1391
PctI GAATGC 1 cut(s) 1717
PdiI GCCGGC 1 cut(s) 1209
PdmI GAANNNNTTC 1 cut(s) 884
PfeI GAWTC 4 cut(s) 235, 1039, 1439, 1607
PfoI TCCNGGA 1 cut(s) 302
PinAI ACCGGT 1 cut(s) 198
PleI GAGTC 1 cut(s) 889
PluTI GGCGCC 1 cut(s) 1721
PpsI GAGTC 1 cut(s) 889
Psp124BI GAGCTC 2 cut(s) 23, 1382
Psp1406I AACGTT 1 cut(s) 218
Psp6I CCWGG 2 cut(s) 302, 1434
PspFI CCCAGC 1 cut(s) 4
PspGI CCWGG 2 cut(s) 302, 1434
PspN4I GGNNCC 4 cut(s) 1227, 1462, 1470, 1719
PspOMI GGGCCC 1 cut(s) 1460
PspPI GGNCC 8 cut(s) 281, 858, 913, 1015, 1460, 1461, 1469, 1599
PstI CTGCAG 1 cut(s) 1275
PsuI RGATCY 1 cut(s) 928
PvuII CAGCTG 1 cut(s) 617
RsaI GTAC 9 cut(s) 377, 583, 589, 598, 1407, 1448, 1514, 1565, 1649
RsaNI GTAC 9 cut(s) 376, 582, 588, 597, 1406, 1447, 1513, 1564, 1648
RseI CAYNNNNRTG 2 cut(s) 47, 251
SacI GAGCTC 2 cut(s) 23, 1382
SacII CCGCGG 1 cut(s) 1068
SaqAI TTAA 2 cut(s) 276, 1557
Sau3AI GATC 5 cut(s) 439, 799, 928, 1290, 1795
Sau96I GGNCC 8 cut(s) 281, 858, 913, 1015, 1460, 1461, 1469, 1599
ScaI AGTACT 3 cut(s) 589, 598, 1565
SchI GAGTC 1 cut(s) 889
ScrFI CCNGG 4 cut(s) 304, 406, 1436, 1763
SduI GDGCHC 4 cut(s) 23, 73, 1382, 1464
SfaNI GCATC 3 cut(s) 256, 751, 1029
SfcI CTRYAG 1 cut(s) 1271
SfoI GGCGCC 1 cut(s) 1719
Sfr303I CCGCGG 1 cut(s) 1068
SgrAI CRCCGGYG 1 cut(s) 1207
SgrBI CCGCGG 1 cut(s) 1068
SinI GGWCC 3 cut(s) 281, 913, 1469
SmiMI CAYNNNNRTG 2 cut(s) 47, 251
SspDI GGCGCC 1 cut(s) 1717
SspMI CTAG 3 cut(s) 311, 654, 774
SstI GAGCTC 2 cut(s) 23, 1382
StyD4I CCNGG 4 cut(s) 302, 404, 1434, 1761
StyI CCWWGG 2 cut(s) 628, 1464
TaaI ACNGT 3 cut(s) 596, 607, 1643
TaiI ACGT 5 cut(s) 221, 255, 369, 1175, 1619
TaqII GACCGA 1 cut(s) 228
TatI WGTACW 4 cut(s) 587, 596, 1563, 1647
TauI GCSGC 7 cut(s) 56, 402, 715, 1067, 1070, 1718, 1723
TfiI GAWTC 4 cut(s) 235, 1039, 1439, 1607
Tru1I TTAA 2 cut(s) 276, 1557
Tru9I TTAA 2 cut(s) 276, 1557
TscAI CASTG 5 cut(s) 543, 1227, 1275, 1751, 1923
TseFI GTSAC 2 cut(s) 1173, 1826
TseI GCWGC 6 cut(s) 617, 1123, 1213, 1246, 1741, 1750
Tsp45I GTSAC 2 cut(s) 1173, 1826
TspDTI ATGAA 5 cut(s) 309, 317, 822, 917, 1514
TspGWI ACGGA 1 cut(s) 1845
TspRI CASTG 5 cut(s) 543, 1227, 1275, 1751, 1923
VpaK11BI GGWCC 3 cut(s) 281, 913, 1469
XapI RAATTY 4 cut(s) 109, 170, 356, 811
XcmI CCANNNNNNNNNTGG 1 cut(s) 529
XmiI GTMKAC 1 cut(s) 369
XmnI GAANNNNTTC 1 cut(s) 884
XspI CTAG 3 cut(s) 311, 654, 774
ZraI GACGTC 1 cut(s) 1173
ZrmI AGTACT 3 cut(s) 589, 598, 1565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.