Rare lipoprotein A (RlpA)-like double-psi beta-barrel
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G38210 |
| fragaria_vesca | FvH4_2g17030 FvH4_2g17030 |
| malus_domestica | MD05G1143200.v1.1 MD10G1143000.v1.1 |
| prunus_persica | Prupe.8G182000_v2.0.a1 |
| pyrus_communis | pycom05g13770 pycom10g12290 |
| rosa_chinensis | RchiOBHm_Chr6g0281211 |
| rosa_laevigata | RLG00000012985 |
| rosa_multiflora | Rmu_sc0027531.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00187220 |
| rosa_rugosa | Rorug06G0139700 |
| rosa_samantha | Rh6AG251600 Rh6BG254900 Rh6CG254400 Rh6DG246200 |
| rosa_wichuraiana | Rw6G021850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 273 |
| AciI | CCGC | 2 cut(s) | 344, 681 |
| AcsI | RAATTY | 1 cut(s) | 328 |
| AcuI | CTGAAG | 1 cut(s) | 156 |
| AfaI | GTAC | 1 cut(s) | 226 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 332 |
| AgsI | TTSAA | 4 cut(s) | 14, 214, 644, 743 |
| AluBI | AGCT | 2 cut(s) | 174, 247 |
| AluI | AGCT | 2 cut(s) | 174, 247 |
| ApeKI | GCWGC | 4 cut(s) | 54, 57, 398, 649 |
| ApoI | RAATTY | 1 cut(s) | 328 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 752 |
| AsuHPI | GGTGA | 3 cut(s) | 167, 469, 580 |
| AsuII | TTCGAA | 1 cut(s) | 578 |
| BanI | GGYRCC | 1 cut(s) | 273 |
| BanII | GRGCYC | 2 cut(s) | 10, 290 |
| BbsI | GAAGAC | 1 cut(s) | 92 |
| BbvI | GCAGC | 4 cut(s) | 66, 69, 410, 661 |
| BccI | CCATC | 3 cut(s) | 113, 539, 721 |
| BciVI | GTATCC | 1 cut(s) | 585 |
| BfaI | CTAG | 2 cut(s) | 603, 757 |
| BfuI | GTATCC | 1 cut(s) | 585 |
| BisI | GCNGC | 4 cut(s) | 55, 58, 399, 650 |
| BlpI | GCTNAGC | 1 cut(s) | 197 |
| BlsI | GCNGC | 4 cut(s) | 56, 59, 400, 651 |
| BmcAI | AGTACT | 1 cut(s) | 226 |
| BmiI | GGNNCC | 3 cut(s) | 7, 275, 287 |
| BmrI | ACTGGG | 1 cut(s) | 619 |
| BmsI | GCATC | 2 cut(s) | 55, 704 |
| BmuI | ACTGGG | 1 cut(s) | 619 |
| BpiI | GAAGAC | 1 cut(s) | 92 |
| BpmI | CTGGAG | 1 cut(s) | 495 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 197 |
| Bpu14I | TTCGAA | 1 cut(s) | 578 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 332 |
| Bse1I | ACTGG | 3 cut(s) | 440, 478, 614 |
| Bse3DI | GCAATG | 1 cut(s) | 637 |
| BseGI | GGATG | 1 cut(s) | 550 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 332 |
| BseMI | GCAATG | 1 cut(s) | 637 |
| BseMII | CTCAG | 2 cut(s) | 188, 239 |
| BseNI | ACTGG | 3 cut(s) | 440, 478, 614 |
| BseXI | GCAGC | 4 cut(s) | 66, 69, 410, 661 |
| BseYI | CCCAGC | 1 cut(s) | 191 |
| BsgI | GTGCAG | 1 cut(s) | 73 |
| BshNI | GGYRCC | 1 cut(s) | 273 |
| BsiSI | CCGG | 1 cut(s) | 202 |
| BslFI | GGGAC | 1 cut(s) | 627 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 332 |
| BsmFI | GGGAC | 1 cut(s) | 627 |
| BsmI | GAATGC | 1 cut(s) | 60 |
| Bsp119I | TTCGAA | 1 cut(s) | 578 |
| Bsp1286I | GDGCHC | 2 cut(s) | 10, 290 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 197 |
| BspACI | CCGC | 2 cut(s) | 344, 681 |
| BspCNI | CTCAG | 2 cut(s) | 189, 240 |
| BspLI | GGNNCC | 3 cut(s) | 7, 275, 287 |
| BspT104I | TTCGAA | 1 cut(s) | 578 |
| BspT107I | GGYRCC | 1 cut(s) | 273 |
| BsrDI | GCAATG | 1 cut(s) | 637 |
| BsrI | ACTGG | 3 cut(s) | 440, 478, 614 |
| Bst4CI | ACNGT | 4 cut(s) | 22, 188, 486, 673 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 404 |
| BstBI | TTCGAA | 1 cut(s) | 578 |
| BstC8I | GCNNGC | 2 cut(s) | 278, 693 |
| BstDEI | CTNAG | 2 cut(s) | 197, 248 |
| BstEII | GGTNACC | 1 cut(s) | 155 |
| BstF5I | GGATG | 1 cut(s) | 550 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 14, 404, 413 |
| BstPI | GGTNACC | 1 cut(s) | 155 |
| BstV1I | GCAGC | 4 cut(s) | 66, 69, 410, 661 |
| BstV2I | GAAGAC | 1 cut(s) | 92 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 720 |
| BsuI | GTATCC | 1 cut(s) | 585 |
| BtsCI | GGATG | 1 cut(s) | 550 |
| BtsI | GCAGTG | 1 cut(s) | 303 |
| BtsIMutI | CAGTG | 2 cut(s) | 193, 303 |
| Cac8I | GCNNGC | 2 cut(s) | 278, 693 |
| Csp6I | GTAC | 1 cut(s) | 225 |
| CviQI | GTAC | 1 cut(s) | 225 |
| DdeI | CTNAG | 2 cut(s) | 197, 248 |
| EciI | GGCGGA | 1 cut(s) | 359 |
| Eco24I | GRGCYC | 2 cut(s) | 10, 290 |
| Eco57I | CTGAAG | 1 cut(s) | 156 |
| Eco91I | GGTNACC | 1 cut(s) | 155 |
| EcoO65I | GGTNACC | 1 cut(s) | 155 |
| EcoT38I | GRGCYC | 2 cut(s) | 10, 290 |
| FaiI | YATR | 9 cut(s) | 153, 177, 243, 271, 296, 351, 450, 494, 516 |
| FaqI | GGGAC | 1 cut(s) | 627 |
| Fnu4HI | GCNGC | 4 cut(s) | 55, 58, 399, 650 |
| FokI | GGATG | 1 cut(s) | 557 |
| FriOI | GRGCYC | 2 cut(s) | 10, 290 |
| Fsp4HI | GCNGC | 4 cut(s) | 55, 58, 399, 650 |
| FspBI | CTAG | 2 cut(s) | 603, 757 |
| GluI | GCNGC | 4 cut(s) | 55, 58, 399, 650 |
| GsaI | CCCAGC | 1 cut(s) | 195 |
| GsuI | CTGGAG | 1 cut(s) | 495 |
| HapII | CCGG | 1 cut(s) | 202 |
| HincII | GTYRAC | 1 cut(s) | 259 |
| HindII | GTYRAC | 1 cut(s) | 259 |
| HpaII | CCGG | 1 cut(s) | 202 |
| HphI | GGTGA | 3 cut(s) | 167, 469, 580 |
| Hpy166II | GTNNAC | 2 cut(s) | 259, 489 |
| Hpy188I | TCNGA | 4 cut(s) | 327, 394, 544, 735 |
| Hpy188III | TCNNGA | 1 cut(s) | 523 |
| Hpy8I | GTNNAC | 2 cut(s) | 259, 489 |
| HpyAV | CCTTC | 6 cut(s) | 20, 131, 170, 559, 565, 737 |
| HpyCH4III | ACNGT | 4 cut(s) | 22, 188, 486, 673 |
| HpyCH4V | TGCA | 6 cut(s) | 46, 54, 98, 280, 363, 416 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 14, 404, 413 |
| HpyF3I | CTNAG | 2 cut(s) | 197, 248 |
| LmnI | GCTCC | 3 cut(s) | 5, 285, 715 |
| LpnPI | CCDG | 9 cut(s) | 177, 215, 290, 343, 453, 459, 536, 570, 595 |
| Lsp1109I | GCAGC | 4 cut(s) | 66, 69, 410, 661 |
| LweI | GCATC | 2 cut(s) | 55, 704 |
| MaeI | CTAG | 2 cut(s) | 603, 757 |
| MaeIII | GTNAC | 3 cut(s) | 155, 464, 667 |
| MboII | GAAGA | 4 cut(s) | 17, 89, 97, 632 |
| MhlI | GDGCHC | 2 cut(s) | 10, 290 |
| MluCI | AATT | 4 cut(s) | 328, 364, 411, 725 |
| MnlI | CCTC | 8 cut(s) | 212, 301, 333, 388, 447, 470, 658, 663 |
| MroXI | GAANNNNTTC | 1 cut(s) | 752 |
| MslI | CAYNNNNRTG | 2 cut(s) | 513, 718 |
| MspI | CCGG | 1 cut(s) | 202 |
| Mva1269I | GAATGC | 1 cut(s) | 60 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 14, 404, 413 |
| NlaIV | GGNNCC | 3 cut(s) | 7, 275, 287 |
| NmuCI | GTSAC | 2 cut(s) | 155, 464 |
| NspV | TTCGAA | 1 cut(s) | 578 |
| PctI | GAATGC | 1 cut(s) | 60 |
| PdmI | GAANNNNTTC | 1 cut(s) | 752 |
| PkrI | GCNGC | 4 cut(s) | 56, 59, 400, 651 |
| PspEI | GGTNACC | 1 cut(s) | 155 |
| PspFI | CCCAGC | 1 cut(s) | 191 |
| PspN4I | GGNNCC | 3 cut(s) | 7, 275, 287 |
| RsaI | GTAC | 1 cut(s) | 226 |
| RsaNI | GTAC | 1 cut(s) | 225 |
| RseI | CAYNNNNRTG | 2 cut(s) | 513, 718 |
| SatI | GCNGC | 4 cut(s) | 55, 58, 399, 650 |
| ScaI | AGTACT | 1 cut(s) | 226 |
| SduI | GDGCHC | 2 cut(s) | 10, 290 |
| SetI | ASST | 7 cut(s) | 142, 162, 176, 249, 541, 570, 669 |
| SfaNI | GCATC | 2 cut(s) | 55, 704 |
| SfuI | TTCGAA | 1 cut(s) | 578 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 513, 718 |
| Sse9I | AATT | 4 cut(s) | 328, 364, 411, 725 |
| SsiI | CCGC | 2 cut(s) | 344, 681 |
| SspMI | CTAG | 2 cut(s) | 603, 757 |
| TaaI | ACNGT | 4 cut(s) | 22, 188, 486, 673 |
| TaqI | TCGA | 2 cut(s) | 578, 663 |
| TasI | AATT | 4 cut(s) | 328, 364, 411, 725 |
| TatI | WGTACW | 1 cut(s) | 224 |
| TscAI | CASTG | 2 cut(s) | 193, 310 |
| TseFI | GTSAC | 2 cut(s) | 155, 464 |
| TseI | GCWGC | 4 cut(s) | 54, 57, 398, 649 |
| Tsp45I | GTSAC | 2 cut(s) | 155, 464 |
| TspDTI | ATGAA | 2 cut(s) | 90, 531 |
| TspRI | CASTG | 2 cut(s) | 193, 310 |
| XapI | RAATTY | 1 cut(s) | 328 |
| XmnI | GAANNNNTTC | 1 cut(s) | 752 |
| XspI | CTAG | 2 cut(s) | 603, 757 |
| ZrmI | AGTACT | 1 cut(s) | 226 |