Rare lipoprotein A (RlpA)-like double-psi beta-barrel
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G38210 |
| fragaria_vesca | FvH4_2g17030 FvH4_2g17030 |
| malus_domestica | MD05G1143200.v1.1 MD10G1143000.v1.1 |
| prunus_persica | Prupe.8G182000_v2.0.a1 |
| pyrus_communis | pycom05g13770 pycom10g12290 |
| rosa_chinensis | RchiOBHm_Chr6g0281211 |
| rosa_laevigata | RLG00000012985 |
| rosa_multiflora | Rmu_sc0027531.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00187220 |
| rosa_rugosa | Rorug06G0139700 |
| rosa_samantha | Rh6AG251600 Rh6BG254900 Rh6CG254400 Rh6DG246200 |
| rosa_wichuraiana | Rw6G021850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 522 |
| AciI | CCGC | 2 cut(s) | 342, 681 |
| AclWI | GGATC | 1 cut(s) | 130 |
| AcsI | RAATTY | 1 cut(s) | 328 |
| AcuI | CTGAAG | 1 cut(s) | 156 |
| AcyI | GRCGYC | 1 cut(s) | 519 |
| AfaI | GTAC | 1 cut(s) | 226 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 332 |
| AgsI | TTSAA | 4 cut(s) | 14, 214, 644, 743 |
| AluBI | AGCT | 3 cut(s) | 143, 174, 247 |
| AluI | AGCT | 3 cut(s) | 143, 174, 247 |
| AlwI | GGATC | 1 cut(s) | 130 |
| ApeKI | GCWGC | 3 cut(s) | 191, 398, 481 |
| ApoI | RAATTY | 1 cut(s) | 328 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 752 |
| AspLEI | GCGC | 1 cut(s) | 196 |
| AspS9I | GGNCC | 1 cut(s) | 157 |
| AsuC2I | CCSGG | 1 cut(s) | 586 |
| AsuHPI | GGTGA | 2 cut(s) | 469, 580 |
| AvaII | GGWCC | 1 cut(s) | 157 |
| BanII | GRGCYC | 1 cut(s) | 339 |
| BbsI | GAAGAC | 1 cut(s) | 92 |
| BbvI | GCAGC | 3 cut(s) | 178, 410, 468 |
| BccI | CCATC | 2 cut(s) | 113, 592 |
| BciVI | GTATCC | 1 cut(s) | 585 |
| BcnI | CCSGG | 1 cut(s) | 586 |
| BfaI | CTAG | 2 cut(s) | 603, 757 |
| BfuI | GTATCC | 1 cut(s) | 585 |
| BisI | GCNGC | 3 cut(s) | 192, 399, 482 |
| BlsI | GCNGC | 3 cut(s) | 193, 400, 483 |
| BmcAI | AGTACT | 1 cut(s) | 226 |
| Bme1390I | CCNGG | 1 cut(s) | 586 |
| Bme18I | GGWCC | 1 cut(s) | 157 |
| BmgT120I | GGNCC | 1 cut(s) | 157 |
| BmiI | GGNNCC | 2 cut(s) | 7, 158 |
| BmrFI | CCNGG | 1 cut(s) | 586 |
| BmrI | ACTGGG | 1 cut(s) | 619 |
| BmsI | GCATC | 1 cut(s) | 55 |
| BmuI | ACTGGG | 1 cut(s) | 619 |
| BpiI | GAAGAC | 1 cut(s) | 92 |
| BpuMI | CCSGG | 1 cut(s) | 586 |
| BsaHI | GRCGYC | 1 cut(s) | 519 |
| BsaJI | CCNNGG | 1 cut(s) | 372 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 214, 244 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 332 |
| Bse1I | ACTGG | 2 cut(s) | 440, 614 |
| Bse3DI | GCAATG | 1 cut(s) | 637 |
| BseDI | CCNNGG | 1 cut(s) | 372 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 332 |
| BseMI | GCAATG | 1 cut(s) | 637 |
| BseMII | CTCAG | 1 cut(s) | 239 |
| BseNI | ACTGG | 2 cut(s) | 440, 614 |
| BseXI | GCAGC | 3 cut(s) | 178, 410, 468 |
| BsiSI | CCGG | 1 cut(s) | 585 |
| BslFI | GGGAC | 3 cut(s) | 170, 273, 627 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 332 |
| BsmFI | GGGAC | 3 cut(s) | 170, 273, 627 |
| Bsp1286I | GDGCHC | 1 cut(s) | 339 |
| Bsp143I | GATC | 1 cut(s) | 122 |
| BspACI | CCGC | 2 cut(s) | 342, 681 |
| BspCNI | CTCAG | 1 cut(s) | 240 |
| BspLI | GGNNCC | 2 cut(s) | 7, 158 |
| BspPI | GGATC | 1 cut(s) | 130 |
| BsrDI | GCAATG | 1 cut(s) | 637 |
| BsrI | ACTGG | 2 cut(s) | 440, 614 |
| BssECI | CCNNGG | 1 cut(s) | 372 |
| BssMI | GATC | 1 cut(s) | 122 |
| BssNI | GRCGYC | 1 cut(s) | 519 |
| BssT1I | CCWWGG | 1 cut(s) | 372 |
| Bst4CI | ACNGT | 3 cut(s) | 188, 673, 753 |
| BstACI | GRCGYC | 1 cut(s) | 519 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 404 |
| BstC8I | GCNNGC | 1 cut(s) | 558 |
| BstDEI | CTNAG | 2 cut(s) | 197, 248 |
| BstHHI | GCGC | 1 cut(s) | 196 |
| BstKTI | GATC | 1 cut(s) | 125 |
| BstMBI | GATC | 1 cut(s) | 122 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 404, 413 |
| BstSCI | CCNGG | 1 cut(s) | 584 |
| BstV1I | GCAGC | 3 cut(s) | 178, 410, 468 |
| BstV2I | GAAGAC | 1 cut(s) | 92 |
| BstX2I | RGATCY | 1 cut(s) | 122 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 720 |
| BstYI | RGATCY | 1 cut(s) | 122 |
| BsuI | GTATCC | 1 cut(s) | 585 |
| BtsI | GCAGTG | 1 cut(s) | 303 |
| BtsIMutI | CAGTG | 2 cut(s) | 193, 303 |
| Cac8I | GCNNGC | 1 cut(s) | 558 |
| CfoI | GCGC | 1 cut(s) | 196 |
| Cfr13I | GGNCC | 1 cut(s) | 157 |
| Csp6I | GTAC | 1 cut(s) | 225 |
| CviQI | GTAC | 1 cut(s) | 225 |
| DdeI | CTNAG | 2 cut(s) | 197, 248 |
| DpnI | GATC | 1 cut(s) | 124 |
| DpnII | GATC | 1 cut(s) | 122 |
| Eco130I | CCWWGG | 1 cut(s) | 372 |
| Eco24I | GRGCYC | 1 cut(s) | 339 |
| Eco47I | GGWCC | 1 cut(s) | 157 |
| Eco57I | CTGAAG | 1 cut(s) | 156 |
| EcoO109I | RGGNCCY | 1 cut(s) | 157 |
| EcoT14I | CCWWGG | 1 cut(s) | 372 |
| EcoT38I | GRGCYC | 1 cut(s) | 339 |
| ErhI | CCWWGG | 1 cut(s) | 372 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 365, 397 |
| FaqI | GGGAC | 3 cut(s) | 170, 273, 627 |
| Fnu4HI | GCNGC | 3 cut(s) | 192, 399, 482 |
| FriOI | GRGCYC | 1 cut(s) | 339 |
| Fsp4HI | GCNGC | 3 cut(s) | 192, 399, 482 |
| FspBI | CTAG | 2 cut(s) | 603, 757 |
| GlaI | GCGC | 1 cut(s) | 195 |
| GluI | GCNGC | 3 cut(s) | 192, 399, 482 |
| HapII | CCGG | 1 cut(s) | 585 |
| HhaI | GCGC | 1 cut(s) | 196 |
| Hin1I | GRCGYC | 1 cut(s) | 519 |
| Hin6I | GCGC | 1 cut(s) | 194 |
| HinP1I | GCGC | 1 cut(s) | 194 |
| HincII | GTYRAC | 1 cut(s) | 259 |
| HindII | GTYRAC | 1 cut(s) | 259 |
| HinfI | GANTC | 2 cut(s) | 286, 486 |
| HpaII | CCGG | 1 cut(s) | 585 |
| HphI | GGTGA | 2 cut(s) | 469, 580 |
| Hpy166II | GTNNAC | 2 cut(s) | 259, 323 |
| Hpy188I | TCNGA | 3 cut(s) | 394, 544, 735 |
| Hpy188III | TCNNGA | 2 cut(s) | 523, 579 |
| Hpy8I | GTNNAC | 2 cut(s) | 259, 323 |
| HpyAV | CCTTC | 6 cut(s) | 20, 131, 170, 559, 565, 737 |
| HpyCH4III | ACNGT | 3 cut(s) | 188, 673, 753 |
| HpyCH4IV | ACGT | 1 cut(s) | 519 |
| HpyCH4V | TGCA | 5 cut(s) | 46, 98, 280, 363, 416 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 404, 413 |
| HpyF3I | CTNAG | 2 cut(s) | 197, 248 |
| HpySE526I | ACGT | 1 cut(s) | 519 |
| Hsp92I | GRCGYC | 1 cut(s) | 519 |
| HspAI | GCGC | 1 cut(s) | 194 |
| Kzo9I | GATC | 1 cut(s) | 122 |
| LmnI | GCTCC | 2 cut(s) | 140, 715 |
| LpnPI | CCDG | 4 cut(s) | 343, 453, 595, 598 |
| Lsp1109I | GCAGC | 3 cut(s) | 178, 410, 468 |
| LweI | GCATC | 1 cut(s) | 55 |
| MaeI | CTAG | 2 cut(s) | 603, 757 |
| MaeII | ACGT | 1 cut(s) | 519 |
| MaeIII | GTNAC | 2 cut(s) | 464, 667 |
| MalI | GATC | 1 cut(s) | 124 |
| MboI | GATC | 1 cut(s) | 122 |
| MboII | GAAGA | 4 cut(s) | 17, 89, 97, 632 |
| MflI | RGATCY | 1 cut(s) | 122 |
| MhlI | GDGCHC | 1 cut(s) | 339 |
| MluCI | AATT | 6 cut(s) | 328, 364, 411, 471, 619, 725 |
| MlyI | GAGTC | 1 cut(s) | 295 |
| MnlI | CCTC | 7 cut(s) | 212, 388, 447, 453, 470, 658, 663 |
| MroXI | GAANNNNTTC | 1 cut(s) | 752 |
| MslI | CAYNNNNRTG | 2 cut(s) | 513, 718 |
| MspI | CCGG | 1 cut(s) | 585 |
| MspR9I | CCNGG | 1 cut(s) | 586 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 404, 413 |
| NciI | CCSGG | 1 cut(s) | 586 |
| NdeII | GATC | 1 cut(s) | 122 |
| NlaIV | GGNNCC | 2 cut(s) | 7, 158 |
| NmuCI | GTSAC | 1 cut(s) | 464 |
| PdmI | GAANNNNTTC | 1 cut(s) | 752 |
| PfeI | GAWTC | 1 cut(s) | 486 |
| PkrI | GCNGC | 3 cut(s) | 193, 400, 483 |
| PleI | GAGTC | 1 cut(s) | 294 |
| PpsI | GAGTC | 1 cut(s) | 294 |
| PpuMI | RGGWCCY | 1 cut(s) | 157 |
| Psp5II | RGGWCCY | 1 cut(s) | 157 |
| PspN4I | GGNNCC | 2 cut(s) | 7, 158 |
| PspPI | GGNCC | 1 cut(s) | 157 |
| PspPPI | RGGWCCY | 1 cut(s) | 157 |
| PsuI | RGATCY | 1 cut(s) | 122 |
| RsaI | GTAC | 1 cut(s) | 226 |
| RsaNI | GTAC | 1 cut(s) | 225 |
| RseI | CAYNNNNRTG | 2 cut(s) | 513, 718 |
| SatI | GCNGC | 3 cut(s) | 192, 399, 482 |
| Sau3AI | GATC | 1 cut(s) | 122 |
| Sau96I | GGNCC | 1 cut(s) | 157 |
| ScaI | AGTACT | 1 cut(s) | 226 |
| SchI | GAGTC | 1 cut(s) | 295 |
| ScrFI | CCNGG | 1 cut(s) | 586 |
| SduI | GDGCHC | 1 cut(s) | 339 |
| SetI | ASST | 9 cut(s) | 145, 162, 176, 249, 464, 522, 541, 570, 669 |
| SfaNI | GCATC | 1 cut(s) | 55 |
| SinI | GGWCC | 1 cut(s) | 157 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 513, 718 |
| Sse9I | AATT | 6 cut(s) | 328, 364, 411, 471, 619, 725 |
| SsiI | CCGC | 2 cut(s) | 342, 681 |
| SspMI | CTAG | 2 cut(s) | 603, 757 |
| StyD4I | CCNGG | 1 cut(s) | 584 |
| StyI | CCWWGG | 1 cut(s) | 372 |
| TaaI | ACNGT | 3 cut(s) | 188, 673, 753 |
| TaiI | ACGT | 1 cut(s) | 522 |
| TaqI | TCGA | 1 cut(s) | 578 |
| TasI | AATT | 6 cut(s) | 328, 364, 411, 471, 619, 725 |
| TatI | WGTACW | 1 cut(s) | 224 |
| TfiI | GAWTC | 1 cut(s) | 486 |
| TscAI | CASTG | 2 cut(s) | 193, 310 |
| TseFI | GTSAC | 1 cut(s) | 464 |
| TseI | GCWGC | 3 cut(s) | 191, 398, 481 |
| Tsp45I | GTSAC | 1 cut(s) | 464 |
| TspDTI | ATGAA | 1 cut(s) | 90 |
| TspRI | CASTG | 2 cut(s) | 193, 310 |
| VpaK11BI | GGWCC | 1 cut(s) | 157 |
| XapI | RAATTY | 1 cut(s) | 328 |
| XmnI | GAANNNNTTC | 1 cut(s) | 752 |
| XspI | CTAG | 2 cut(s) | 603, 757 |
| ZraI | GACGTC | 1 cut(s) | 520 |
| ZrmI | AGTACT | 1 cut(s) | 226 |