CONTAINS InterPro DOMAIN s WD40 repeat-like (InterPro IPR011046), WD40 repeat, region (InterPro IPR017986), WD40 repeat (InterPro IPR001680), WD40 YVTN repeat-like (InterPro IPR015943)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24710 |
| fragaria_vesca | FvH4_2g17560 FvH4_2g17560 FvH4_2g17560 FvH4_2g17560 FvH4_2g17560 FvH4_2g17560 |
| malus_domestica | MD05G1154700.v1.1 MD10G1148800.v1.1 MD10G1149000.v1.1 |
| prunus_persica | Prupe.8G187800_v2.0.a1 |
| pyrus_communis | pycom05g14830 pycom10g12860 |
| rosa_chinensis | RchiOBHm_Chr6g0282501 |
| rosa_laevigata | RLG00000012889 |
| rosa_multiflora | Rmu_co8503373.1_g000001 Rmu_sc0005697.1_g000031 |
| rosa_roxburghii | Rroxscaffold_7G00186310 |
| rosa_rugosa | Rorug06G0146900 |
| rosa_samantha | Rh6AG260300 Rh6BG263400 Rh6CG262500 Rh6DG254300 |
| rosa_wichuraiana | Rw6G022500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 578 |
| AarI | CACCTGC | 1 cut(s) | 4174 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 664 |
| Acc36I | ACCTGC | 2 cut(s) | 256, 4174 |
| AccB1I | GGYRCC | 5 cut(s) | 954, 1739, 3784, 3796, 4186 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 943, 1011 |
| AccI | GTMKAC | 2 cut(s) | 668, 2029 |
| AclI | AACGTT | 1 cut(s) | 1367 |
| AclWI | GGATC | 7 cut(s) | 571, 633, 646, 1069, 1755, 2067, 3048 |
| AcoI | YGGCCR | 3 cut(s) | 23, 460, 1472 |
| AcsI | RAATTY | 7 cut(s) | 271, 512, 1190, 2849, 3020, 3586, 3766 |
| AcuI | CTGAAG | 4 cut(s) | 258, 2312, 3116, 3675 |
| AcyI | GRCGYC | 4 cut(s) | 90, 159, 3489, 3797 |
| AfaI | GTAC | 6 cut(s) | 319, 585, 762, 1402, 1487, 1713 |
| AfeI | AGCGCT | 1 cut(s) | 2889 |
| AflII | CTTAAG | 1 cut(s) | 1283 |
| AflIII | ACRYGT | 1 cut(s) | 1372 |
| AhlI | ACTAGT | 1 cut(s) | 3476 |
| AjiI | CACGTC | 1 cut(s) | 103 |
| AjnI | CCWGG | 6 cut(s) | 950, 2054, 2136, 2827, 3523, 3574 |
| AleI | CACNNNNGTG | 1 cut(s) | 963 |
| Alw21I | GWGCWC | 4 cut(s) | 147, 970, 2662, 3411 |
| Alw26I | GTCTC | 5 cut(s) | 109, 1965, 2554, 3264, 3343 |
| AlwI | GGATC | 7 cut(s) | 571, 633, 646, 1069, 1755, 2067, 3048 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 329, 1856, 2788, 3632 |
| Ama87I | CYCGRG | 1 cut(s) | 3084 |
| Aor51HI | AGCGCT | 1 cut(s) | 2889 |
| ApoI | RAATTY | 7 cut(s) | 271, 512, 1190, 2849, 3020, 3586, 3766 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3147, 3179 |
| AsiSI | GCGATCGC | 1 cut(s) | 1092 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2010, 3516 |
| AsuC2I | CCSGG | 1 cut(s) | 2685 |
| AsuHPI | GGTGA | 9 cut(s) | 73, 145, 158, 221, 354, 548, 689, 2339, 3692 |
| AsuNHI | GCTAGC | 1 cut(s) | 2366 |
| AvaI | CYCGRG | 1 cut(s) | 3084 |
| AvaII | GGWCC | 4 cut(s) | 1515, 2354, 2597, 4147 |
| AxyI | CCTNAGG | 3 cut(s) | 3954, 3981, 4008 |
| BaeGI | GKGCMC | 2 cut(s) | 1810, 2448 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2641, 2671, 2674, 2704 |
| BalI | TGGCCA | 1 cut(s) | 1474 |
| BamHI | GGATCC | 1 cut(s) | 638 |
| BanI | GGYRCC | 5 cut(s) | 954, 1739, 3784, 3796, 4186 |
| BanII | GRGCYC | 2 cut(s) | 147, 3583 |
| BauI | CACGAG | 1 cut(s) | 963 |
| BbsI | GAAGAC | 1 cut(s) | 403 |
| Bbv12I | GWGCWC | 4 cut(s) | 147, 970, 2662, 3411 |
| BbvCI | CCTCAGC | 5 cut(s) | 330, 837, 1968, 2675, 3318 |
| BceAI | ACGGC | 6 cut(s) | 447, 1036, 1548, 2682, 2708, 3209 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4095, 4129 |
| BciT130I | CCWGG | 6 cut(s) | 952, 2056, 2138, 2829, 3525, 3576 |
| BciVI | GTATCC | 3 cut(s) | 1549, 2699, 3295 |
| BcnI | CCSGG | 1 cut(s) | 2685 |
| BcoDI | GTCTC | 5 cut(s) | 109, 1965, 2554, 3264, 3343 |
| BcuI | ACTAGT | 1 cut(s) | 3476 |
| BfaI | CTAG | 9 cut(s) | 522, 816, 2367, 2475, 2753, 2792, 3477, 3482, 3602 |
| BfoI | RGCGCY | 6 cut(s) | 2891, 3234, 3800, 3893, 3920, 4028 |
| BfrI | CTTAAG | 1 cut(s) | 1283 |
| BfuAI | ACCTGC | 2 cut(s) | 256, 4174 |
| BfuI | GTATCC | 3 cut(s) | 1549, 2699, 3295 |
| BglII | AGATCT | 1 cut(s) | 524 |
| BmcAI | AGTACT | 1 cut(s) | 585 |
| Bme1390I | CCNGG | 7 cut(s) | 952, 2056, 2138, 2685, 2829, 3525, 3576 |
| Bme18I | GGWCC | 4 cut(s) | 1515, 2354, 2597, 4147 |
| BmeT110I | CYCGRG | 1 cut(s) | 3084 |
| BmgBI | CACGTC | 1 cut(s) | 103 |
| BmrFI | CCNGG | 7 cut(s) | 952, 2056, 2138, 2685, 2829, 3525, 3576 |
| BmrI | ACTGGG | 1 cut(s) | 1844 |
| BmtI | GCTAGC | 1 cut(s) | 2370 |
| BmuI | ACTGGG | 1 cut(s) | 1844 |
| BpiI | GAAGAC | 1 cut(s) | 403 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4082, 4114 |
| BpmI | CTGGAG | 7 cut(s) | 645, 1947, 2876, 3479, 3558, 3720, 3768 |
| Bpu10I | CCTNAGC | 5 cut(s) | 330, 837, 1968, 2675, 3318 |
| BpuEI | CTTGAG | 4 cut(s) | 726, 3951, 3978, 4086 |
| BpuMI | CCSGG | 1 cut(s) | 2685 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2255, 3512 |
| BsaHI | GRCGYC | 4 cut(s) | 90, 159, 3489, 3797 |
| BsaI | GGTCTC | 2 cut(s) | 2554, 3343 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 243, 273, 1582, 1612, 2709, 2739, 3741, 3771 |
| Bse118I | RCCGGY | 3 cut(s) | 152, 168, 1783 |
| Bse21I | CCTNAGG | 3 cut(s) | 3954, 3981, 4008 |
| Bse3DI | GCAATG | 1 cut(s) | 1592 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2255, 3512 |
| BseBI | CCWGG | 6 cut(s) | 952, 2056, 2138, 2829, 3525, 3576 |
| BseJI | GATNNNNATC | 2 cut(s) | 2255, 3512 |
| BseMI | GCAATG | 1 cut(s) | 1592 |
| BseRI | GAGGAG | 3 cut(s) | 825, 1590, 2294 |
| BseSI | GKGCMC | 2 cut(s) | 1810, 2448 |
| BseX3I | CGGCCG | 1 cut(s) | 23 |
| BseYI | CCCAGC | 2 cut(s) | 2237, 4048 |
| BsgI | GTGCAG | 2 cut(s) | 750, 876 |
| Bsh1285I | CGRYCG | 3 cut(s) | 26, 1092, 4181 |
| BshNI | GGYRCC | 5 cut(s) | 954, 1739, 3784, 3796, 4186 |
| BsiEI | CGRYCG | 3 cut(s) | 26, 1092, 4181 |
| BsiHKAI | GWGCWC | 4 cut(s) | 147, 970, 2662, 3411 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3084 |
| BsiSI | CCGG | 5 cut(s) | 22, 153, 169, 1784, 2685 |
| BslFI | GGGAC | 4 cut(s) | 893, 2936, 3743, 4133 |
| BsmAI | GTCTC | 5 cut(s) | 109, 1965, 2554, 3264, 3343 |
| BsmBI | CGTCTC | 1 cut(s) | 109 |
| BsmFI | GGGAC | 4 cut(s) | 893, 2936, 3743, 4133 |
| BsmI | GAATGC | 3 cut(s) | 17, 1252, 3315 |
| Bso31I | GGTCTC | 2 cut(s) | 2554, 3343 |
| BsoBI | CYCGRG | 1 cut(s) | 3084 |
| Bsp1286I | GDGCHC | 7 cut(s) | 147, 970, 1810, 2448, 2662, 3411, 3583 |
| Bsp1407I | TGTACA | 1 cut(s) | 1711 |
| Bsp19I | CCATGG | 1 cut(s) | 71 |
| BspHI | TCATGA | 2 cut(s) | 2767, 3142 |
| BspMAI | CTGCAG | 5 cut(s) | 325, 1660, 1666, 1705, 3262 |
| BspMI | ACCTGC | 2 cut(s) | 256, 4174 |
| BspOI | GCTAGC | 1 cut(s) | 2370 |
| BspPI | GGATC | 7 cut(s) | 571, 633, 646, 1069, 1755, 2067, 3048 |
| BspQI | GCTCTTC | 2 cut(s) | 690, 3168 |
| BspT107I | GGYRCC | 5 cut(s) | 954, 1739, 3784, 3796, 4186 |
| BspTI | CTTAAG | 1 cut(s) | 1283 |
| BspTNI | GGTCTC | 2 cut(s) | 2554, 3343 |
| BsrDI | GCAATG | 1 cut(s) | 1592 |
| BsrFI | RCCGGY | 3 cut(s) | 152, 168, 1783 |
| BsrGI | TGTACA | 1 cut(s) | 1711 |
| BssAI | RCCGGY | 3 cut(s) | 152, 168, 1783 |
| BssNI | GRCGYC | 4 cut(s) | 90, 159, 3489, 3797 |
| BssSI | CACGAG | 1 cut(s) | 963 |
| BssT1I | CCWWGG | 4 cut(s) | 71, 222, 3007, 3027 |
| Bst2BI | CACGAG | 1 cut(s) | 963 |
| Bst2UI | CCWGG | 6 cut(s) | 952, 2056, 2138, 2829, 3525, 3576 |
| Bst4CI | ACNGT | 6 cut(s) | 317, 1121, 2068, 2784, 3544, 3556 |
| Bst6I | CTCTTC | 4 cut(s) | 690, 1212, 3092, 3168 |
| BstACI | GRCGYC | 4 cut(s) | 90, 159, 3489, 3797 |
| BstAFI | CTTAAG | 1 cut(s) | 1283 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 737, 1673, 1694, 2342, 3251, 3632 |
| BstAUI | TGTACA | 1 cut(s) | 1711 |
| BstC8I | GCNNGC | 9 cut(s) | 154, 201, 934, 1796, 2368, 2433, 3315, 3608, 4191 |
| BstDSI | CCRYGG | 1 cut(s) | 71 |
| BstH2I | RGCGCY | 6 cut(s) | 2891, 3234, 3800, 3893, 3920, 4028 |
| BstMAI | GTCTC | 5 cut(s) | 109, 1965, 2554, 3264, 3343 |
| BstMCI | CGRYCG | 3 cut(s) | 26, 1092, 4181 |
| BstNI | CCWGG | 6 cut(s) | 952, 2056, 2138, 2829, 3525, 3576 |
| BstNSI | RCATGY | 4 cut(s) | 1088, 1376, 1563, 2435 |
| BstSCI | CCNGG | 7 cut(s) | 950, 2054, 2136, 2683, 2827, 3523, 3574 |
| BstSLI | GKGCMC | 2 cut(s) | 1810, 2448 |
| BstV2I | GAAGAC | 1 cut(s) | 403 |
| BstX2I | RGATCY | 5 cut(s) | 524, 563, 638, 1760, 3040 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 439, 3344 |
| BstYI | RGATCY | 5 cut(s) | 524, 563, 638, 1760, 3040 |
| BstZI | CGGCCG | 1 cut(s) | 23 |
| Bsu36I | CCTNAGG | 3 cut(s) | 3954, 3981, 4008 |
| BsuI | GTATCC | 3 cut(s) | 1549, 2699, 3295 |
| BtgI | CCRYGG | 1 cut(s) | 71 |
| BtgZI | GCGATG | 1 cut(s) | 4110 |
| BtrI | CACGTC | 1 cut(s) | 103 |
| BtsI | GCAGTG | 3 cut(s) | 1540, 1783, 2878 |
| BtsIMutI | CAGTG | 8 cut(s) | 234, 621, 1192, 1540, 1783, 2336, 2878, 2900 |
| BveI | ACCTGC | 2 cut(s) | 256, 4174 |
| Cac8I | GCNNGC | 9 cut(s) | 154, 201, 934, 1796, 2368, 2433, 3315, 3608, 4191 |
| CaiI | CAGNNNCTG | 4 cut(s) | 329, 1856, 2788, 3632 |
| CciI | TCATGA | 2 cut(s) | 2767, 3142 |
| Cfr10I | RCCGGY | 3 cut(s) | 152, 168, 1783 |
| CseI | GACGC | 3 cut(s) | 98, 148, 3497 |
| Csp6I | GTAC | 6 cut(s) | 318, 584, 761, 1401, 1486, 1712 |
| CviQI | GTAC | 6 cut(s) | 318, 584, 761, 1401, 1486, 1712 |
| DinI | GGCGCC | 1 cut(s) | 3798 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 664 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 664 |
| EaeI | YGGCCR | 3 cut(s) | 23, 460, 1472 |
| EagI | CGGCCG | 1 cut(s) | 23 |
| Eam1104I | CTCTTC | 4 cut(s) | 690, 1212, 3092, 3168 |
| EarI | CTCTTC | 4 cut(s) | 690, 1212, 3092, 3168 |
| Ecl136II | GAGCTC | 1 cut(s) | 145 |
| EclXI | CGGCCG | 1 cut(s) | 23 |
| Eco130I | CCWWGG | 4 cut(s) | 71, 222, 3007, 3027 |
| Eco24I | GRGCYC | 2 cut(s) | 147, 3583 |
| Eco31I | GGTCTC | 2 cut(s) | 2554, 3343 |
| Eco32I | GATATC | 2 cut(s) | 1480, 2257 |
| Eco47I | GGWCC | 4 cut(s) | 1515, 2354, 2597, 4147 |
| Eco47III | AGCGCT | 1 cut(s) | 2889 |
| Eco52I | CGGCCG | 1 cut(s) | 23 |
| Eco53kI | GAGCTC | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 4 cut(s) | 258, 2312, 3116, 3675 |
| Eco81I | CCTNAGG | 3 cut(s) | 3954, 3981, 4008 |
| Eco88I | CYCGRG | 1 cut(s) | 3084 |
| EcoICRI | GAGCTC | 1 cut(s) | 145 |
| EcoRI | GAATTC | 1 cut(s) | 3586 |
| EcoRII | CCWGG | 6 cut(s) | 950, 2054, 2136, 2827, 3523, 3574 |
| EcoRV | GATATC | 2 cut(s) | 1480, 2257 |
| EcoT14I | CCWWGG | 4 cut(s) | 71, 222, 3007, 3027 |
| EcoT38I | GRGCYC | 2 cut(s) | 147, 3583 |
| EgeI | GGCGCC | 1 cut(s) | 3798 |
| EheI | GGCGCC | 1 cut(s) | 3798 |
| ErhI | CCWWGG | 4 cut(s) | 71, 222, 3007, 3027 |
| Esp3I | CGTCTC | 1 cut(s) | 109 |
| FaqI | GGGAC | 4 cut(s) | 893, 2936, 3743, 4133 |
| FblI | GTMKAC | 2 cut(s) | 668, 2029 |
| FriOI | GRGCYC | 2 cut(s) | 147, 3583 |
| FspBI | CTAG | 9 cut(s) | 522, 816, 2367, 2475, 2753, 2792, 3477, 3482, 3602 |
| GsaI | CCCAGC | 2 cut(s) | 2241, 4052 |
| GsuI | CTGGAG | 7 cut(s) | 645, 1947, 2876, 3479, 3558, 3720, 3768 |
| HaeII | RGCGCY | 6 cut(s) | 2891, 3234, 3800, 3893, 3920, 4028 |
| HapII | CCGG | 5 cut(s) | 22, 153, 169, 1784, 2685 |
| HgaI | GACGC | 3 cut(s) | 98, 148, 3497 |
| Hin1I | GRCGYC | 4 cut(s) | 90, 159, 3489, 3797 |
| HincII | GTYRAC | 1 cut(s) | 3189 |
| HindII | GTYRAC | 1 cut(s) | 3189 |
| HindIII | AAGCTT | 2 cut(s) | 605, 3470 |
| HpaII | CCGG | 5 cut(s) | 22, 153, 169, 1784, 2685 |
| HphI | GGTGA | 9 cut(s) | 73, 145, 158, 221, 354, 548, 689, 2339, 3692 |
| Hpy166II | GTNNAC | 7 cut(s) | 669, 1061, 1117, 2030, 3189, 3211, 3683 |
| Hpy8I | GTNNAC | 7 cut(s) | 669, 1061, 1117, 2030, 3189, 3211, 3683 |
| Hpy99I | CGWCG | 5 cut(s) | 31, 92, 164, 284, 1526 |
| HpyAV | CCTTC | 7 cut(s) | 1615, 2287, 2909, 2950, 3283, 3527, 3660 |
| HpyCH4III | ACNGT | 6 cut(s) | 317, 1121, 2068, 2784, 3544, 3556 |
| HpyCH4IV | ACGT | 2 cut(s) | 102, 1367 |
| HpySE526I | ACGT | 2 cut(s) | 102, 1367 |
| Hsp92I | GRCGYC | 4 cut(s) | 90, 159, 3489, 3797 |
| KasI | GGCGCC | 1 cut(s) | 3796 |
| KroI | GCCGGC | 1 cut(s) | 152 |
| KroNI | GCCGGC | 1 cut(s) | 154 |
| LguI | GCTCTTC | 2 cut(s) | 690, 3168 |
| MaeI | CTAG | 9 cut(s) | 522, 816, 2367, 2475, 2753, 2792, 3477, 3482, 3602 |
| MaeII | ACGT | 2 cut(s) | 102, 1367 |
| MaeIII | GTNAC | 8 cut(s) | 79, 311, 448, 1368, 1508, 1565, 2200, 2560 |
| MfeI | CAATTG | 2 cut(s) | 53, 849 |
| MflI | RGATCY | 5 cut(s) | 524, 563, 638, 1760, 3040 |
| MhlI | GDGCHC | 7 cut(s) | 147, 970, 1810, 2448, 2662, 3411, 3583 |
| MlsI | TGGCCA | 1 cut(s) | 1474 |
| MluNI | TGGCCA | 1 cut(s) | 1474 |
| Mly113I | GGCGCC | 1 cut(s) | 3797 |
| MlyI | GAGTC | 3 cut(s) | 212, 1412, 3727 |
| MmeI | TCCRAC | 6 cut(s) | 160, 171, 407, 1346, 2826, 3755 |
| Mox20I | TGGCCA | 1 cut(s) | 1474 |
| MroNI | GCCGGC | 1 cut(s) | 152 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2010, 3516 |
| MscI | TGGCCA | 1 cut(s) | 1474 |
| MslI | CAYNNNNRTG | 6 cut(s) | 789, 952, 963, 2769, 3336, 3342 |
| Msp20I | TGGCCA | 1 cut(s) | 1474 |
| MspCI | CTTAAG | 1 cut(s) | 1283 |
| MspI | CCGG | 5 cut(s) | 22, 153, 169, 1784, 2685 |
| MspR9I | CCNGG | 7 cut(s) | 952, 2056, 2138, 2685, 2829, 3525, 3576 |
| MunI | CAATTG | 2 cut(s) | 53, 849 |
| Mva1269I | GAATGC | 3 cut(s) | 17, 1252, 3315 |
| MvaI | CCWGG | 6 cut(s) | 952, 2056, 2138, 2829, 3525, 3576 |
| NaeI | GCCGGC | 1 cut(s) | 154 |
| NarI | GGCGCC | 1 cut(s) | 3797 |
| NciI | CCSGG | 1 cut(s) | 2685 |
| NcoI | CCATGG | 1 cut(s) | 71 |
| NgoMIV | GCCGGC | 1 cut(s) | 152 |
| NheI | GCTAGC | 1 cut(s) | 2366 |
| NmeAIII | GCCGAG | 1 cut(s) | 229 |
| NmuCI | GTSAC | 4 cut(s) | 79, 448, 1508, 1565 |
| NspI | RCATGY | 4 cut(s) | 1088, 1376, 1563, 2435 |
| OliI | CACNNNNGTG | 1 cut(s) | 963 |
| PacI | TTAATTAA | 1 cut(s) | 4225 |
| PaeI | GCATGC | 1 cut(s) | 2435 |
| PagI | TCATGA | 2 cut(s) | 2767, 3142 |
| PaqCI | CACCTGC | 1 cut(s) | 4174 |
| PciI | ACATGT | 1 cut(s) | 1372 |
| PciSI | GCTCTTC | 2 cut(s) | 690, 3168 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 39, 84 |
| PctI | GAATGC | 3 cut(s) | 17, 1252, 3315 |
| PdiI | GCCGGC | 1 cut(s) | 154 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2010, 3516 |
| PfeI | GAWTC | 9 cut(s) | 49, 746, 1001, 1355, 1526, 1586, 1606, 2492, 3674 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 943, 1011 |
| Ple19I | CGATCG | 1 cut(s) | 1092 |
| PleI | GAGTC | 3 cut(s) | 212, 1412, 3727 |
| PluTI | GGCGCC | 1 cut(s) | 3800 |
| PpsI | GAGTC | 3 cut(s) | 212, 1412, 3727 |
| PpuMI | RGGWCCY | 2 cut(s) | 2597, 4147 |
| PscI | ACATGT | 1 cut(s) | 1372 |
| PsiI | TTATAA | 1 cut(s) | 578 |
| Psp124BI | GAGCTC | 1 cut(s) | 147 |
| Psp1406I | AACGTT | 1 cut(s) | 1367 |
| Psp5II | RGGWCCY | 2 cut(s) | 2597, 4147 |
| Psp6I | CCWGG | 6 cut(s) | 950, 2054, 2136, 2827, 3523, 3574 |
| PspFI | CCCAGC | 2 cut(s) | 2237, 4048 |
| PspGI | CCWGG | 6 cut(s) | 950, 2054, 2136, 2827, 3523, 3574 |
| PspPPI | RGGWCCY | 2 cut(s) | 2597, 4147 |
| PstI | CTGCAG | 5 cut(s) | 325, 1660, 1666, 1705, 3262 |
| PstNI | CAGNNNCTG | 4 cut(s) | 329, 1856, 2788, 3632 |
| PsuI | RGATCY | 5 cut(s) | 524, 563, 638, 1760, 3040 |
| PvuI | CGATCG | 1 cut(s) | 1092 |
| RgaI | GCGATCGC | 1 cut(s) | 1092 |
| RsaI | GTAC | 6 cut(s) | 319, 585, 762, 1402, 1487, 1713 |
| RsaNI | GTAC | 6 cut(s) | 318, 584, 761, 1401, 1486, 1712 |
| RseI | CAYNNNNRTG | 6 cut(s) | 789, 952, 963, 2769, 3336, 3342 |
| SacI | GAGCTC | 1 cut(s) | 147 |
| SapI | GCTCTTC | 2 cut(s) | 690, 3168 |
| ScaI | AGTACT | 1 cut(s) | 585 |
| SchI | GAGTC | 3 cut(s) | 212, 1412, 3727 |
| ScrFI | CCNGG | 7 cut(s) | 952, 2056, 2138, 2685, 2829, 3525, 3576 |
| SduI | GDGCHC | 7 cut(s) | 147, 970, 1810, 2448, 2662, 3411, 3583 |
| SfaAI | GCGATCGC | 1 cut(s) | 1092 |
| SfoI | GGCGCC | 1 cut(s) | 3798 |
| SgfI | GCGATCGC | 1 cut(s) | 1092 |
| SgrAI | CRCCGGYG | 1 cut(s) | 168 |
| SinI | GGWCC | 4 cut(s) | 1515, 2354, 2597, 4147 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 789, 952, 963, 2769, 3336, 3342 |
| SmlI | CTYRAG | 5 cut(s) | 741, 1283, 3966, 3993, 4101 |
| SmoI | CTYRAG | 5 cut(s) | 741, 1283, 3966, 3993, 4101 |
| SpeI | ACTAGT | 1 cut(s) | 3476 |
| SphI | GCATGC | 1 cut(s) | 2435 |
| SspDI | GGCGCC | 1 cut(s) | 3796 |
| SspI | AATATT | 1 cut(s) | 1750 |
| SspMI | CTAG | 9 cut(s) | 522, 816, 2367, 2475, 2753, 2792, 3477, 3482, 3602 |
| SstI | GAGCTC | 1 cut(s) | 147 |
| StyD4I | CCNGG | 7 cut(s) | 950, 2054, 2136, 2683, 2827, 3523, 3574 |
| StyI | CCWWGG | 4 cut(s) | 71, 222, 3007, 3027 |
| TaaI | ACNGT | 6 cut(s) | 317, 1121, 2068, 2784, 3544, 3556 |
| TaiI | ACGT | 2 cut(s) | 105, 1370 |
| TaqI | TCGA | 7 cut(s) | 162, 1246, 1463, 1524, 1589, 2217, 2259 |
| TatI | WGTACW | 2 cut(s) | 583, 1711 |
| TfiI | GAWTC | 9 cut(s) | 49, 746, 1001, 1355, 1526, 1586, 1606, 2492, 3674 |
| TscAI | CASTG | 8 cut(s) | 241, 628, 1192, 1540, 1783, 2343, 2878, 2900 |
| TseFI | GTSAC | 4 cut(s) | 79, 448, 1508, 1565 |
| Tsp45I | GTSAC | 4 cut(s) | 79, 448, 1508, 1565 |
| TspDTI | ATGAA | 3 cut(s) | 2810, 3159, 3320 |
| TspGWI | ACGGA | 4 cut(s) | 97, 1815, 3443, 4103 |
| TspRI | CASTG | 8 cut(s) | 241, 628, 1192, 1540, 1783, 2343, 2878, 2900 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 943, 1011 |
| Vha464I | CTTAAG | 1 cut(s) | 1283 |
| VpaK11BI | GGWCC | 4 cut(s) | 1515, 2354, 2597, 4147 |
| XapI | RAATTY | 7 cut(s) | 271, 512, 1190, 2849, 3020, 3586, 3766 |
| XbaI | TCTAGA | 3 cut(s) | 521, 815, 2474 |
| XceI | RCATGY | 4 cut(s) | 1088, 1376, 1563, 2435 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3034 |
| XmiI | GTMKAC | 2 cut(s) | 668, 2029 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2010, 3516 |
| XspI | CTAG | 9 cut(s) | 522, 816, 2367, 2475, 2753, 2792, 3477, 3482, 3602 |
| ZrmI | AGTACT | 1 cut(s) | 585 |