CONTAINS InterPro DOMAIN s WD40 repeat-like (InterPro IPR011046), WD40 repeat, region (InterPro IPR017986), WD40 repeat (InterPro IPR001680), WD40 YVTN repeat-like (InterPro IPR015943)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24710 |
| fragaria_vesca | FvH4_2g17560 FvH4_2g17560 FvH4_2g17560 FvH4_2g17560 FvH4_2g17560 FvH4_2g17560 |
| malus_domestica | MD05G1154700.v1.1 MD10G1148800.v1.1 MD10G1149000.v1.1 |
| prunus_persica | Prupe.8G187800_v2.0.a1 |
| pyrus_communis | pycom05g14830 pycom10g12860 |
| rosa_chinensis | RchiOBHm_Chr6g0282501 |
| rosa_laevigata | RLG00000012889 |
| rosa_multiflora | Rmu_co8503373.1_g000001 Rmu_sc0005697.1_g000031 |
| rosa_roxburghii | Rroxscaffold_7G00186310 |
| rosa_rugosa | Rorug06G0146900 |
| rosa_samantha | Rh6AG260300 Rh6BG263400 Rh6CG262500 Rh6DG254300 |
| rosa_wichuraiana | Rw6G022500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 41, 664 |
| Acc36I | ACCTGC | 1 cut(s) | 256 |
| AccB1I | GGYRCC | 7 cut(s) | 1065, 1868, 2829, 4087, 4114, 4168, 4249 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1122, 1439 |
| AccI | GTMKAC | 1 cut(s) | 2158 |
| AcoI | YGGCCR | 4 cut(s) | 23, 460, 1601, 2988 |
| AcsI | RAATTY | 7 cut(s) | 512, 1301, 1734, 3149, 3642, 3715, 3895 |
| AcuI | CTGAAG | 4 cut(s) | 258, 1415, 2441, 3804 |
| AcyI | GRCGYC | 1 cut(s) | 4169 |
| AfaI | GTAC | 7 cut(s) | 471, 585, 762, 805, 1531, 1842, 2430 |
| AflII | CTTAAG | 1 cut(s) | 3224 |
| AflIII | ACRYGT | 3 cut(s) | 882, 1195, 1501 |
| AgeI | ACCGGT | 1 cut(s) | 1912 |
| AjiI | CACGTC | 3 cut(s) | 103, 289, 883 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1902, 1934 |
| AleI | CACNNNNGTG | 1 cut(s) | 1074 |
| Alw21I | GWGCWC | 5 cut(s) | 147, 1081, 2791, 3019, 3540 |
| Alw26I | GTCTC | 7 cut(s) | 109, 697, 1457, 2094, 2683, 3393, 3472 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 329, 1985, 2917, 3620, 3761 |
| Ama87I | CYCGRG | 2 cut(s) | 694, 3213 |
| ApaI | GGGCCC | 1 cut(s) | 3712 |
| ApoI | RAATTY | 7 cut(s) | 512, 1301, 1734, 3149, 3642, 3715, 3895 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 830, 862, 3276, 3308 |
| AsiGI | ACCGGT | 1 cut(s) | 1912 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 243, 2139, 3645 |
| AspLEI | GCGC | 9 cut(s) | 294, 1020, 2210, 2250, 3940, 4009, 4036, 4063, 4171 |
| AspS9I | GGNCC | 9 cut(s) | 1125, 1644, 2483, 2520, 2726, 3708, 3709, 3977, 4210 |
| AsuC2I | CCSGG | 2 cut(s) | 2814, 3732 |
| AvaI | CYCGRG | 2 cut(s) | 694, 3213 |
| AvaII | GGWCC | 4 cut(s) | 1644, 2483, 2726, 4210 |
| BaeGI | GKGCMC | 3 cut(s) | 1939, 2577, 3712 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2770, 2800, 2803, 2833 |
| BalI | TGGCCA | 2 cut(s) | 1603, 2990 |
| BamHI | GGATCC | 2 cut(s) | 638, 1274 |
| BanI | GGYRCC | 7 cut(s) | 1065, 1868, 2829, 4087, 4114, 4168, 4249 |
| BanII | GRGCYC | 3 cut(s) | 147, 3019, 3712 |
| BauI | CACGAG | 1 cut(s) | 1074 |
| BbsI | GAAGAC | 1 cut(s) | 403 |
| Bbv12I | GWGCWC | 5 cut(s) | 147, 1081, 2791, 3019, 3540 |
| BbvCI | CCTCAGC | 7 cut(s) | 330, 855, 948, 2097, 2166, 2804, 3447 |
| BceAI | ACGGC | 4 cut(s) | 447, 1147, 1677, 3338 |
| BciVI | GTATCC | 3 cut(s) | 1678, 2828, 3424 |
| BcnI | CCSGG | 2 cut(s) | 2814, 3732 |
| BcoDI | GTCTC | 7 cut(s) | 109, 697, 1457, 2094, 2683, 3393, 3472 |
| BfaI | CTAG | 4 cut(s) | 522, 927, 2604, 2921 |
| BfoI | RGCGCY | 4 cut(s) | 4010, 4037, 4064, 4172 |
| BfrI | CTTAAG | 1 cut(s) | 3224 |
| BfuAI | ACCTGC | 1 cut(s) | 256 |
| BfuI | GTATCC | 3 cut(s) | 1678, 2828, 3424 |
| BglII | AGATCT | 2 cut(s) | 524, 1313 |
| BlpI | GCTNAGC | 1 cut(s) | 2448 |
| BmcAI | AGTACT | 1 cut(s) | 585 |
| Bme18I | GGWCC | 4 cut(s) | 1644, 2483, 2726, 4210 |
| BmeT110I | CYCGRG | 2 cut(s) | 694, 3213 |
| BmgBI | CACGTC | 3 cut(s) | 103, 289, 883 |
| BmgT120I | GGNCC | 9 cut(s) | 1125, 1644, 2483, 2520, 2726, 3708, 3709, 3977, 4210 |
| BmrI | ACTGGG | 2 cut(s) | 1973, 2905 |
| BmuI | ACTGGG | 2 cut(s) | 1973, 2905 |
| BpiI | GAAGAC | 1 cut(s) | 403 |
| BpmI | CTGGAG | 8 cut(s) | 2076, 2388, 3005, 3608, 3636, 3687, 3849, 3897 |
| Bpu10I | CCTNAGC | 8 cut(s) | 330, 855, 948, 1475, 2097, 2166, 2804, 3447 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2448 |
| BpuEI | CTTGAG | 2 cut(s) | 726, 4176 |
| BpuMI | CCSGG | 2 cut(s) | 2814, 3732 |
| BsaBI | GATNNNNATC | 2 cut(s) | 823, 2384 |
| BsaHI | GRCGYC | 1 cut(s) | 4169 |
| BsaI | GGTCTC | 3 cut(s) | 697, 2683, 3472 |
| BsaWI | WCCGGW | 2 cut(s) | 623, 1912 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 243, 273, 2838, 2868, 3870, 3900 |
| Bse118I | RCCGGY | 3 cut(s) | 168, 1912, 2826 |
| Bse3DI | GCAATG | 1 cut(s) | 1721 |
| Bse8I | GATNNNNATC | 2 cut(s) | 823, 2384 |
| BseJI | GATNNNNATC | 2 cut(s) | 823, 2384 |
| BseMI | GCAATG | 1 cut(s) | 1721 |
| BseRI | GAGGAG | 3 cut(s) | 936, 1719, 2423 |
| BseSI | GKGCMC | 3 cut(s) | 1939, 2577, 3712 |
| BseX3I | CGGCCG | 1 cut(s) | 23 |
| BsgI | GTGCAG | 2 cut(s) | 750, 987 |
| Bsh1285I | CGRYCG | 1 cut(s) | 26 |
| BshNI | GGYRCC | 7 cut(s) | 1065, 1868, 2829, 4087, 4114, 4168, 4249 |
| BshTI | ACCGGT | 1 cut(s) | 1912 |
| BsiEI | CGRYCG | 1 cut(s) | 26 |
| BsiHKAI | GWGCWC | 5 cut(s) | 147, 1081, 2791, 3019, 3540 |
| BsiHKCI | CYCGRG | 2 cut(s) | 694, 3213 |
| BsiSI | CCGG | 7 cut(s) | 22, 169, 624, 1913, 2814, 2827, 3731 |
| BslFI | GGGAC | 4 cut(s) | 1004, 3065, 4007, 4196 |
| BsmAI | GTCTC | 7 cut(s) | 109, 697, 1457, 2094, 2683, 3393, 3472 |
| BsmBI | CGTCTC | 1 cut(s) | 109 |
| BsmFI | GGGAC | 4 cut(s) | 1004, 3065, 4007, 4196 |
| BsmI | GAATGC | 3 cut(s) | 1363, 3377, 3444 |
| Bso31I | GGTCTC | 3 cut(s) | 697, 2683, 3472 |
| BsoBI | CYCGRG | 2 cut(s) | 694, 3213 |
| Bsp120I | GGGCCC | 1 cut(s) | 3708 |
| Bsp1286I | GDGCHC | 8 cut(s) | 147, 1081, 1939, 2577, 2791, 3019, 3540, 3712 |
| Bsp1407I | TGTACA | 1 cut(s) | 1840 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2448 |
| Bsp19I | CCATGG | 1 cut(s) | 71 |
| BspHI | TCATGA | 2 cut(s) | 2896, 3271 |
| BspMAI | CTGCAG | 7 cut(s) | 325, 1789, 1795, 1813, 1834, 3391, 3571 |
| BspMI | ACCTGC | 1 cut(s) | 256 |
| BspQI | GCTCTTC | 1 cut(s) | 3297 |
| BspT107I | GGYRCC | 7 cut(s) | 1065, 1868, 2829, 4087, 4114, 4168, 4249 |
| BspTI | CTTAAG | 1 cut(s) | 3224 |
| BspTNI | GGTCTC | 3 cut(s) | 697, 2683, 3472 |
| BsrDI | GCAATG | 1 cut(s) | 1721 |
| BsrFI | RCCGGY | 3 cut(s) | 168, 1912, 2826 |
| BsrGI | TGTACA | 1 cut(s) | 1840 |
| BssAI | RCCGGY | 3 cut(s) | 168, 1912, 2826 |
| BssNI | GRCGYC | 1 cut(s) | 4169 |
| BssSI | CACGAG | 1 cut(s) | 1074 |
| BssT1I | CCWWGG | 4 cut(s) | 71, 222, 3136, 3973 |
| Bst2BI | CACGAG | 1 cut(s) | 1074 |
| Bst4CI | ACNGT | 7 cut(s) | 317, 842, 1232, 2197, 2319, 3673, 3854 |
| Bst6I | CTCTTC | 3 cut(s) | 676, 1323, 3297 |
| BstACI | GRCGYC | 1 cut(s) | 4169 |
| BstAFI | CTTAAG | 1 cut(s) | 3224 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 737, 1802, 1823, 2471, 3620, 3761 |
| BstAUI | TGTACA | 1 cut(s) | 1840 |
| BstC8I | GCNNGC | 8 cut(s) | 154, 201, 1045, 1925, 2562, 3444, 3737, 4254 |
| BstDSI | CCRYGG | 1 cut(s) | 71 |
| BstH2I | RGCGCY | 4 cut(s) | 4010, 4037, 4064, 4172 |
| BstHHI | GCGC | 9 cut(s) | 294, 1020, 2210, 2250, 3940, 4009, 4036, 4063, 4171 |
| BstMAI | GTCTC | 7 cut(s) | 109, 697, 1457, 2094, 2683, 3393, 3472 |
| BstMCI | CGRYCG | 1 cut(s) | 26 |
| BstNSI | RCATGY | 4 cut(s) | 1199, 1505, 1692, 2564 |
| BstSLI | GKGCMC | 3 cut(s) | 1939, 2577, 3712 |
| BstV2I | GAAGAC | 1 cut(s) | 403 |
| BstX2I | RGATCY | 7 cut(s) | 524, 638, 871, 1274, 1313, 1889, 3169 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 439, 3473 |
| BstYI | RGATCY | 7 cut(s) | 524, 638, 871, 1274, 1313, 1889, 3169 |
| BstZI | CGGCCG | 1 cut(s) | 23 |
| BsuI | GTATCC | 3 cut(s) | 1678, 2828, 3424 |
| BtgI | CCRYGG | 1 cut(s) | 71 |
| BtgZI | GCGATG | 2 cut(s) | 110, 2286 |
| BtrI | CACGTC | 3 cut(s) | 103, 289, 883 |
| BtsI | GCAGTG | 4 cut(s) | 1669, 1912, 3007, 3740 |
| BtsIMutI | CAGTG | 7 cut(s) | 234, 1303, 1669, 1912, 3007, 3029, 3740 |
| BveI | ACCTGC | 1 cut(s) | 256 |
| Cac8I | GCNNGC | 8 cut(s) | 154, 201, 1045, 1925, 2562, 3444, 3737, 4254 |
| CaiI | CAGNNNCTG | 5 cut(s) | 329, 1985, 2917, 3620, 3761 |
| CciI | TCATGA | 2 cut(s) | 2896, 3271 |
| CfoI | GCGC | 9 cut(s) | 294, 1020, 2210, 2250, 3940, 4009, 4036, 4063, 4171 |
| Cfr10I | RCCGGY | 3 cut(s) | 168, 1912, 2826 |
| Cfr13I | GGNCC | 9 cut(s) | 1125, 1644, 2483, 2520, 2726, 3708, 3709, 3977, 4210 |
| CsiI | ACCWGGT | 1 cut(s) | 1260 |
| Csp6I | GTAC | 7 cut(s) | 470, 584, 761, 804, 1530, 1841, 2429 |
| CspAI | ACCGGT | 1 cut(s) | 1912 |
| CviQI | GTAC | 7 cut(s) | 470, 584, 761, 804, 1530, 1841, 2429 |
| DinI | GGCGCC | 1 cut(s) | 4170 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 41, 664 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 41, 664 |
| EaeI | YGGCCR | 4 cut(s) | 23, 460, 1601, 2988 |
| EagI | CGGCCG | 1 cut(s) | 23 |
| Eam1104I | CTCTTC | 3 cut(s) | 676, 1323, 3297 |
| EarI | CTCTTC | 3 cut(s) | 676, 1323, 3297 |
| Ecl136II | GAGCTC | 2 cut(s) | 145, 3017 |
| EclXI | CGGCCG | 1 cut(s) | 23 |
| Eco130I | CCWWGG | 4 cut(s) | 71, 222, 3136, 3973 |
| Eco147I | AGGCCT | 2 cut(s) | 4157, 4184 |
| Eco24I | GRGCYC | 3 cut(s) | 147, 3019, 3712 |
| Eco31I | GGTCTC | 3 cut(s) | 697, 2683, 3472 |
| Eco32I | GATATC | 2 cut(s) | 1609, 2386 |
| Eco47I | GGWCC | 4 cut(s) | 1644, 2483, 2726, 4210 |
| Eco52I | CGGCCG | 1 cut(s) | 23 |
| Eco53kI | GAGCTC | 2 cut(s) | 145, 3017 |
| Eco57I | CTGAAG | 4 cut(s) | 258, 1415, 2441, 3804 |
| Eco88I | CYCGRG | 2 cut(s) | 694, 3213 |
| EcoICRI | GAGCTC | 2 cut(s) | 145, 3017 |
| EcoO109I | RGGNCCY | 4 cut(s) | 2520, 2726, 3708, 4210 |
| EcoRI | GAATTC | 2 cut(s) | 1734, 3715 |
| EcoRV | GATATC | 2 cut(s) | 1609, 2386 |
| EcoT14I | CCWWGG | 4 cut(s) | 71, 222, 3136, 3973 |
| EcoT38I | GRGCYC | 3 cut(s) | 147, 3019, 3712 |
| EgeI | GGCGCC | 1 cut(s) | 4170 |
| EheI | GGCGCC | 1 cut(s) | 4170 |
| ErhI | CCWWGG | 4 cut(s) | 71, 222, 3136, 3973 |
| Esp3I | CGTCTC | 1 cut(s) | 109 |
| FaqI | GGGAC | 4 cut(s) | 1004, 3065, 4007, 4196 |
| FblI | GTMKAC | 1 cut(s) | 2158 |
| FriOI | GRGCYC | 3 cut(s) | 147, 3019, 3712 |
| FspBI | CTAG | 4 cut(s) | 522, 927, 2604, 2921 |
| GlaI | GCGC | 9 cut(s) | 293, 1019, 2209, 2249, 3939, 4008, 4035, 4062, 4170 |
| GsuI | CTGGAG | 8 cut(s) | 2076, 2388, 3005, 3608, 3636, 3687, 3849, 3897 |
| HaeII | RGCGCY | 4 cut(s) | 4010, 4037, 4064, 4172 |
| HapII | CCGG | 7 cut(s) | 22, 169, 624, 1913, 2814, 2827, 3731 |
| HhaI | GCGC | 9 cut(s) | 294, 1020, 2210, 2250, 3940, 4009, 4036, 4063, 4171 |
| Hin1I | GRCGYC | 1 cut(s) | 4169 |
| Hin6I | GCGC | 9 cut(s) | 292, 1018, 2208, 2248, 3938, 4007, 4034, 4061, 4169 |
| HinP1I | GCGC | 9 cut(s) | 292, 1018, 2208, 2248, 3938, 4007, 4034, 4061, 4169 |
| HincII | GTYRAC | 2 cut(s) | 2650, 3318 |
| HindII | GTYRAC | 2 cut(s) | 2650, 3318 |
| HindIII | AAGCTT | 2 cut(s) | 605, 3599 |
| HpaI | GTTAAC | 1 cut(s) | 2650 |
| HpaII | CCGG | 7 cut(s) | 22, 169, 624, 1913, 2814, 2827, 3731 |
| Hpy99I | CGWCG | 1 cut(s) | 31 |
| HpyAV | CCTTC | 7 cut(s) | 1464, 1744, 2416, 3038, 3079, 3412, 3789 |
| HpyCH4III | ACNGT | 7 cut(s) | 317, 842, 1232, 2197, 2319, 3673, 3854 |
| HpyCH4IV | ACGT | 3 cut(s) | 102, 288, 882 |
| HpySE526I | ACGT | 3 cut(s) | 102, 288, 882 |
| Hsp92I | GRCGYC | 1 cut(s) | 4169 |
| HspAI | GCGC | 9 cut(s) | 292, 1018, 2208, 2248, 3938, 4007, 4034, 4061, 4169 |
| KasI | GGCGCC | 1 cut(s) | 4168 |
| KspAI | GTTAAC | 1 cut(s) | 2650 |
| LguI | GCTCTTC | 1 cut(s) | 3297 |
| MabI | ACCWGGT | 1 cut(s) | 1260 |
| MaeI | CTAG | 4 cut(s) | 522, 927, 2604, 2921 |
| MaeII | ACGT | 3 cut(s) | 102, 288, 882 |
| MaeIII | GTNAC | 6 cut(s) | 79, 311, 448, 1637, 2329, 2689 |
| MfeI | CAATTG | 2 cut(s) | 960, 3636 |
| MflI | RGATCY | 7 cut(s) | 524, 638, 871, 1274, 1313, 1889, 3169 |
| MhlI | GDGCHC | 8 cut(s) | 147, 1081, 1939, 2577, 2791, 3019, 3540, 3712 |
| MlsI | TGGCCA | 2 cut(s) | 1603, 2990 |
| MluNI | TGGCCA | 2 cut(s) | 1603, 2990 |
| Mly113I | GGCGCC | 1 cut(s) | 4169 |
| MlyI | GAGTC | 1 cut(s) | 212 |
| MmeI | TCCRAC | 7 cut(s) | 86, 160, 171, 407, 1440, 1457, 2955 |
| Mox20I | TGGCCA | 2 cut(s) | 1603, 2990 |
| MroXI | GAANNNNTTC | 3 cut(s) | 243, 2139, 3645 |
| MscI | TGGCCA | 2 cut(s) | 1603, 2990 |
| MslI | CAYNNNNRTG | 6 cut(s) | 900, 1063, 1074, 2898, 3465, 3471 |
| Msp20I | TGGCCA | 2 cut(s) | 1603, 2990 |
| MspA1I | CMGCKG | 9 cut(s) | 326, 1325, 1784, 1790, 1814, 1823, 2096, 2823, 3386 |
| MspCI | CTTAAG | 1 cut(s) | 3224 |
| MspI | CCGG | 7 cut(s) | 22, 169, 624, 1913, 2814, 2827, 3731 |
| MunI | CAATTG | 2 cut(s) | 960, 3636 |
| Mva1269I | GAATGC | 3 cut(s) | 1363, 3377, 3444 |
| NarI | GGCGCC | 1 cut(s) | 4169 |
| NciI | CCSGG | 2 cut(s) | 2814, 3732 |
| NcoI | CCATGG | 1 cut(s) | 71 |
| NmeAIII | GCCGAG | 1 cut(s) | 229 |
| NmuCI | GTSAC | 3 cut(s) | 79, 448, 1637 |
| NspI | RCATGY | 4 cut(s) | 1199, 1505, 1692, 2564 |
| OliI | CACNNNNGTG | 1 cut(s) | 1074 |
| PacI | TTAATTAA | 1 cut(s) | 4309 |
| PaeI | GCATGC | 1 cut(s) | 2564 |
| PagI | TCATGA | 2 cut(s) | 2896, 3271 |
| PceI | AGGCCT | 2 cut(s) | 4157, 4184 |
| PciI | ACATGT | 2 cut(s) | 1195, 1501 |
| PciSI | GCTCTTC | 1 cut(s) | 3297 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 39, 84 |
| PctI | GAATGC | 3 cut(s) | 1363, 3377, 3444 |
| PdmI | GAANNNNTTC | 3 cut(s) | 243, 2139, 3645 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1122, 1439 |
| PfoI | TCCNGGA | 1 cut(s) | 3888 |
| PinAI | ACCGGT | 1 cut(s) | 1912 |
| PleI | GAGTC | 1 cut(s) | 212 |
| PluTI | GGCGCC | 1 cut(s) | 4172 |
| PpsI | GAGTC | 1 cut(s) | 212 |
| PpuMI | RGGWCCY | 2 cut(s) | 2726, 4210 |
| PscI | ACATGT | 2 cut(s) | 1195, 1501 |
| Psp124BI | GAGCTC | 2 cut(s) | 147, 3019 |
| Psp5II | RGGWCCY | 2 cut(s) | 2726, 4210 |
| PspOMI | GGGCCC | 1 cut(s) | 3708 |
| PspPI | GGNCC | 9 cut(s) | 1125, 1644, 2483, 2520, 2726, 3708, 3709, 3977, 4210 |
| PspPPI | RGGWCCY | 2 cut(s) | 2726, 4210 |
| PstI | CTGCAG | 7 cut(s) | 325, 1789, 1795, 1813, 1834, 3391, 3571 |
| PstNI | CAGNNNCTG | 5 cut(s) | 329, 1985, 2917, 3620, 3761 |
| PsuI | RGATCY | 7 cut(s) | 524, 638, 871, 1274, 1313, 1889, 3169 |
| PvuII | CAGCTG | 8 cut(s) | 326, 1325, 1784, 1790, 1814, 1823, 2096, 3386 |
| RsaI | GTAC | 7 cut(s) | 471, 585, 762, 805, 1531, 1842, 2430 |
| RsaNI | GTAC | 7 cut(s) | 470, 584, 761, 804, 1530, 1841, 2429 |
| RseI | CAYNNNNRTG | 6 cut(s) | 900, 1063, 1074, 2898, 3465, 3471 |
| SacI | GAGCTC | 2 cut(s) | 147, 3019 |
| SapI | GCTCTTC | 1 cut(s) | 3297 |
| Sau96I | GGNCC | 9 cut(s) | 1125, 1644, 2483, 2520, 2726, 3708, 3709, 3977, 4210 |
| ScaI | AGTACT | 1 cut(s) | 585 |
| SchI | GAGTC | 1 cut(s) | 212 |
| SduI | GDGCHC | 8 cut(s) | 147, 1081, 1939, 2577, 2791, 3019, 3540, 3712 |
| SexAI | ACCWGGT | 1 cut(s) | 1260 |
| SfoI | GGCGCC | 1 cut(s) | 4170 |
| SgrAI | CRCCGGYG | 1 cut(s) | 168 |
| SinI | GGWCC | 4 cut(s) | 1644, 2483, 2726, 4210 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 900, 1063, 1074, 2898, 3465, 3471 |
| SmlI | CTYRAG | 3 cut(s) | 741, 3224, 4191 |
| SmoI | CTYRAG | 3 cut(s) | 741, 3224, 4191 |
| SphI | GCATGC | 1 cut(s) | 2564 |
| SseBI | AGGCCT | 2 cut(s) | 4157, 4184 |
| SspDI | GGCGCC | 1 cut(s) | 4168 |
| SspI | AATATT | 1 cut(s) | 1879 |
| SspMI | CTAG | 4 cut(s) | 522, 927, 2604, 2921 |
| SstI | GAGCTC | 2 cut(s) | 147, 3019 |
| StuI | AGGCCT | 2 cut(s) | 4157, 4184 |
| StyI | CCWWGG | 4 cut(s) | 71, 222, 3136, 3973 |
| TaaI | ACNGT | 7 cut(s) | 317, 842, 1232, 2197, 2319, 3673, 3854 |
| TaiI | ACGT | 3 cut(s) | 105, 291, 885 |
| TaqI | TCGA | 8 cut(s) | 162, 1131, 1357, 1732, 1763, 1957, 2346, 2388 |
| TatI | WGTACW | 2 cut(s) | 583, 1840 |
| TauI | GCSGC | 8 cut(s) | 1018, 3185, 3245, 3968, 4039, 4066, 4120, 4174 |
| TscAI | CASTG | 7 cut(s) | 241, 1303, 1669, 1912, 3007, 3029, 3747 |
| TseFI | GTSAC | 3 cut(s) | 79, 448, 1637 |
| Tsp45I | GTSAC | 3 cut(s) | 79, 448, 1637 |
| TspDTI | ATGAA | 6 cut(s) | 1539, 1749, 2939, 3288, 3449, 3831 |
| TspGWI | ACGGA | 3 cut(s) | 97, 1944, 3572 |
| TspRI | CASTG | 7 cut(s) | 241, 1303, 1669, 1912, 3007, 3029, 3747 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1122, 1439 |
| Vha464I | CTTAAG | 1 cut(s) | 3224 |
| VpaK11BI | GGWCC | 4 cut(s) | 1644, 2483, 2726, 4210 |
| XapI | RAATTY | 7 cut(s) | 512, 1301, 1734, 3149, 3642, 3715, 3895 |
| XbaI | TCTAGA | 3 cut(s) | 521, 926, 2603 |
| XceI | RCATGY | 4 cut(s) | 1199, 1505, 1692, 2564 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 69 |
| XmiI | GTMKAC | 1 cut(s) | 2158 |
| XmnI | GAANNNNTTC | 3 cut(s) | 243, 2139, 3645 |
| XspI | CTAG | 4 cut(s) | 522, 927, 2604, 2921 |
| ZrmI | AGTACT | 1 cut(s) | 585 |