Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0010242

Physical Location & Seq

Genomic Coordinates Forward (+)

15834192 .. 15838729

Gene Structure 4538 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g18460.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGGCGTCTCCGCAGCAAGTAGCCCCTAGCGCCGATGTGGTTGGCAATGCATTTGTCCTTCAGTACTACCATATCTTGGAGAAGTCTCCAGAGCACGTTTACCGATTTTATCAAGATGATAGCAAGTTTGGTCGCCCCGAGGGTAATGGGATGATGAATACTGTAACCACCATGGATATAATCAACAGGAAAATAGTTGAGAATGGGAAGCTCAGTGCAAATGTTGTAACTGTGGATGCTCAAGAATCTTTTAATCGGGGTGTATTTGTCCTTGTGACTGGGTTTATAATTGGAATGGACAGTTTGAAGAAGAAATTTACCCAAAGCTTTTTCTTGGCACCACAAGACAAAGGCGGCTTCTATGTTCTGAATGATGTCTTCAGATATGTGGATGATTCTGTTAACCAAGATACAGACCATGGATCAGTTGCCGATGTTGAAGCTCCTCTTAATTCGGAGCAAGAACCTTCTTTGCCAGACAGTCATGTTTCTGAGCCTGTAACTGCTGTTCCTGAAGATGTCACCGAGGAGAAGAGAGAAGTCCCAATTGAAGTAGAGGAAATACCTGAAATCGTCGATGAAATCCCAGATGATTCAGAGGTTGTGCCTGAATCTGGATACTCGGAACCAGTTGTGGTCATGGTGGAATCTGACAAACCCGCATCGGTGGTGGACGATGCTAAATACTCAGCAACTGTGGTCGCTGAAGCTGAACAGTCTGTGCCGGTGGTGGCGGAATCTGTACTTTCGGCACCGGTGGTGGTCAGAGCTATTCCTAAATCTGAAGAAGTGCCTAAGAAGTCATATGCCTCAATTGTAAAGGTTATGAAGGAGAGTGCTCTACCATTTTCTGCTCCTGCACATGCTACTGTGAGAGCCATTTCAAAGTCCCAAGAGCCGCGGGCCGTTGCTGCTCCACAACCTGCTCCAGTTACCGAAACAGTAGTTTCCAGCACAAATGCTAAAGAAGATGGGAACCAACTAGAGGCCGAAGTTGAAGGGCACTCTATCTACATCAAAGGTCTGCCTTATAATGCCACACATGATATAATAGAGAATGAATTTAAAAAGTTTGGATCCATCAAGAACGGCGGAATACAAGTTAGAAGTCAAAAGGGCTTTGGTTTTGGCTTTGTGGAATTCGAGAATGCAAGTGCTGTACAAAGTGCACTAGAGGCTTCACCCATCATGATTAATGGACGTCAAGTTGTTGTCGAGGAAAAGAGATCTACAAGTCGAGGGGGGAGTAGGGGAAGATTTTCATCTGGAAGGGGGACTGGATACAGGAACGAAGGATCTAATGGGTACAGGAATGAGGGACCTAATGGGTACAGGAATGATGGACCTAATGTTGGATACCGGAATGATGCACCTAATGGGTACCGGGGGGATGGACCAAGAGGACGTGGAGGCTATGGAGGTGGTAGAGGTTATGGCCGCAGCGATTTCAAGTCCGAATTTGGAGGAAGGAATACAGGTAGGGGAGGATCATCGGGCCGTGGAGGTGATGGGTTTCAGAGGTCTGAGAATGGTGGTCGTGTGAATCGTGCTGGTGGACCGGCTGTTAATGCAGCACCCAAAACTTCAGCTCCCCGGGTGTCTGCTTCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006508 GO:0006807 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010494 GO:0016236 GO:0016579 GO:0019538 GO:0032386 GO:0032879 GO:0032991 GO:0034517 GO:0035770 GO:0035973 GO:0036211 GO:0036464 GO:0043021 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051049 GO:0060341 GO:0060627 GO:0060628 GO:0061912 GO:0061919 GO:0065007 GO:0070646 GO:0070647 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1905538 GO:1990861 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTF2 RRM_1

Protein Analysis

538

Amino Acids

57.5

Weight (kDa)

5.18

Isoelectric Point (pI)

43.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTF2	PF02136	14 - 129	4.4e-25	Nuclear transport factor 2 (NTF2) domain
RRM_1	PF00076	337 - 402	5e-11	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010242)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25150 AT3G25150
fragaria_vesca	FvH4_2g18460 FvH4_2g18460 FvH4_2g18460
malus_domestica	MD05G1170400.v1.1 MD10G1158600.v1.1
prunus_persica	Prupe.8G197600_v2.0.a1
pyrus_communis	pycom05g15760 pycom10g13710
rosa_chinensis	RchiOBHm_Chr6g0283941
rosa_laevigata	RLG00000012785
rosa_multiflora	Rmu_ssc0000442.1_g000025
rosa_roxburghii	Rroxscaffold_7G00185040
rosa_rugosa	Rorug06G0158600 Rorug06G0158700
rosa_samantha	Rh6AG271900 Rh6BG272800 Rh6CG274000 Rh6DG267000
rosa_wichuraiana	Rw6G023430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	287, 1032
AatII	GACGTC	1 cut(s)	1204
Acc36I	ACCTGC	1 cut(s)	931
Acc65I	GGTACC	1 cut(s)	1380
AccB1I	GGYRCC	3 cut(s)	337, 751, 1380
AccB7I	CCANNNNNTGG	1 cut(s)	76
AccII	CGCG	1 cut(s)	901
AciI	CCGC	8 cut(s)	11, 354, 660, 734, 899, 901, 1092, 1438
AclWI	GGATC	5 cut(s)	430, 1071, 1084, 1303, 1495
AcoI	YGGCCR	1 cut(s)	1435
AcsI	RAATTY	4 cut(s)	314, 1061, 1139, 1457
AcuI	CTGAAG	6 cut(s)	44, 364, 534, 726, 804, 1569
AcyI	GRCGYC	2 cut(s)	5, 1201
AfaI	GTAC	6 cut(s)	65, 744, 1161, 1307, 1331, 1382
AfiI	CCNNNNNNNGG	4 cut(s)	76, 614, 985, 1352
AgeI	ACCGGT	1 cut(s)	754
AgsI	TTSAA	6 cut(s)	307, 440, 551, 885, 998, 1450
AjiI	CACGTC	1 cut(s)	1406
AluBI	AGCT	6 cut(s)	211, 327, 443, 710, 770, 1589
AluI	AGCT	6 cut(s)	211, 327, 443, 710, 770, 1589
Alw21I	GWGCWC	3 cut(s)	96, 841, 1171
Alw26I	GTCTC	2 cut(s)	12, 90
Alw44I	GTGCAC	1 cut(s)	1167
AlwI	GGATC	5 cut(s)	430, 1071, 1084, 1303, 1495
AlwNI	CAGNNNCTG	1 cut(s)	695
Ama87I	CYCGRG	2 cut(s)	137, 1593
AoxI	GGCC	4 cut(s)	903, 987, 1435, 1495
ApaLI	GTGCAC	1 cut(s)	1167
ApeKI	GCWGC	4 cut(s)	13, 911, 1440, 1571
ApoI	RAATTY	4 cut(s)	314, 1061, 1139, 1457
AseI	ATTAAT	1 cut(s)	1194
AsiGI	ACCGGT	1 cut(s)	754
Asp700I	GAANNNNTTC	1 cut(s)	1258
Asp718I	GGTACC	1 cut(s)	1380
AspLEI	GCGC	1 cut(s)	32
AspS9I	GGNCC	6 cut(s)	903, 1319, 1343, 1394, 1495, 1556
AsuC2I	CCSGG	3 cut(s)	1385, 1594, 1595
AsuHPI	GGTGA	3 cut(s)	514, 1173, 1517
AvaI	CYCGRG	2 cut(s)	137, 1593
AvaII	GGWCC	4 cut(s)	1319, 1343, 1394, 1556
BaeGI	GKGCMC	2 cut(s)	1005, 1171
BamHI	GGATCC	1 cut(s)	1076
BanI	GGYRCC	3 cut(s)	337, 751, 1380
BbsI	GAAGAC	1 cut(s)	370
Bbv12I	GWGCWC	3 cut(s)	96, 841, 1171
BbvI	GCAGC	4 cut(s)	25, 898, 1452, 1583
BccI	CCATC	6 cut(s)	965, 1088, 1193, 1334, 1385, 1502
BceAI	ACGGC	3 cut(s)	890, 1105, 1482
BciVI	GTATCC	3 cut(s)	611, 1274, 1349
BcnI	CCSGG	3 cut(s)	1385, 1594, 1595
BcoDI	GTCTC	2 cut(s)	12, 90
BfaI	CTAG	3 cut(s)	27, 983, 1172
BfoI	RGCGCY	1 cut(s)	33
BfuAI	ACCTGC	1 cut(s)	931
BfuI	GTATCC	3 cut(s)	611, 1274, 1349
BglII	AGATCT	1 cut(s)	1226
BisI	GCNGC	7 cut(s)	14, 355, 899, 912, 1438, 1441, 1572
BlsI	GCNGC	7 cut(s)	15, 356, 900, 913, 1439, 1442, 1573
BmcAI	AGTACT	1 cut(s)	65
Bme1390I	CCNGG	3 cut(s)	1385, 1594, 1595
Bme18I	GGWCC	4 cut(s)	1319, 1343, 1394, 1556
BmeT110I	CYCGRG	2 cut(s)	137, 1593
BmgBI	CACGTC	1 cut(s)	1406
BmgT120I	GGNCC	6 cut(s)	903, 1319, 1343, 1394, 1495, 1556
BmiI	GGNNCC	7 cut(s)	339, 627, 753, 977, 1078, 1320, 1382
BmrFI	CCNGG	3 cut(s)	1385, 1594, 1595
BmrI	ACTGGG	1 cut(s)	288
BmsI	GCATC	4 cut(s)	226, 667, 671, 1357
BmuI	ACTGGG	1 cut(s)	288
BpiI	GAAGAC	1 cut(s)	370
BpmI	CTGGAG	2 cut(s)	72, 912
BpuEI	CTTGAG	1 cut(s)	225
BpuMI	CCSGG	3 cut(s)	1385, 1594, 1595
BsaBI	GATNNNNATC	1 cut(s)	1261
BsaHI	GRCGYC	2 cut(s)	5, 1201
BsaJI	CCNNGG	9 cut(s)	138, 171, 418, 525, 899, 1384, 1498, 1592, 1593
BsaWI	WCCGGW	2 cut(s)	754, 1359
BsaXI	ACNNNNNCTCC	2 cut(s)	1573, 1603
Bsc4I	CCNNNNNNNGG	4 cut(s)	76, 614, 985, 1352
Bse118I	RCCGGY	3 cut(s)	724, 754, 1558
Bse1I	ACTGG	4 cut(s)	283, 629, 929, 1282
Bse3DI	GCAATG	1 cut(s)	52
Bse8I	GATNNNNATC	1 cut(s)	1261
BseDI	CCNNGG	9 cut(s)	138, 171, 418, 525, 899, 1384, 1498, 1592, 1593
BseGI	GGATG	4 cut(s)	156, 241, 397, 1396
BseJI	GATNNNNATC	1 cut(s)	1261
BseLI	CCNNNNNNNGG	4 cut(s)	76, 614, 985, 1352
BseMI	GCAATG	1 cut(s)	52
BseMII	CTCAG	4 cut(s)	226, 483, 702, 1515
BseNI	ACTGG	4 cut(s)	283, 629, 929, 1282
BseRI	GAGGAG	2 cut(s)	435, 542
BseSI	GKGCMC	2 cut(s)	1005, 1171
BseXI	GCAGC	4 cut(s)	25, 898, 1452, 1583
BsgI	GTGCAG	1 cut(s)	843
Bsh1236I	CGCG	1 cut(s)	901
BshFI	GGCC	4 cut(s)	905, 989, 1437, 1497
BshNI	GGYRCC	3 cut(s)	337, 751, 1380
BshTI	ACCGGT	1 cut(s)	754
BsiHKAI	GWGCWC	3 cut(s)	96, 841, 1171
BsiHKCI	CYCGRG	2 cut(s)	137, 1593
BsiSI	CCGG	6 cut(s)	725, 755, 1360, 1384, 1559, 1594
BslFI	GGGAC	4 cut(s)	527, 874, 1288, 1332
BslI	CCNNNNNNNGG	4 cut(s)	76, 614, 985, 1352
BsmAI	GTCTC	2 cut(s)	12, 90
BsmBI	CGTCTC	1 cut(s)	12
BsmFI	GGGAC	4 cut(s)	527, 874, 1288, 1332
BsmI	GAATGC	1 cut(s)	1153
BsnI	GGCC	4 cut(s)	905, 989, 1437, 1497
BsoBI	CYCGRG	2 cut(s)	137, 1593
Bsp1286I	GDGCHC	4 cut(s)	96, 841, 1005, 1171
Bsp1407I	TGTACA	1 cut(s)	1159
Bsp143I	GATC	5 cut(s)	422, 1076, 1226, 1295, 1487
Bsp19I	CCATGG	2 cut(s)	171, 418
BspACI	CCGC	8 cut(s)	11, 354, 660, 734, 899, 901, 1092, 1438
BspANI	GGCC	4 cut(s)	905, 989, 1437, 1497
BspCNI	CTCAG	4 cut(s)	225, 484, 701, 1516
BspFNI	CGCG	1 cut(s)	901
BspHI	TCATGA	1 cut(s)	1188
BspLI	GGNNCC	7 cut(s)	339, 627, 753, 977, 1078, 1320, 1382
BspMI	ACCTGC	1 cut(s)	931
BspPI	GGATC	5 cut(s)	430, 1071, 1084, 1303, 1495
BspT107I	GGYRCC	3 cut(s)	337, 751, 1380
BsrDI	GCAATG	1 cut(s)	52
BsrFI	RCCGGY	3 cut(s)	724, 754, 1558
BsrGI	TGTACA	1 cut(s)	1159
BsrI	ACTGG	4 cut(s)	283, 629, 929, 1282
BssAI	RCCGGY	3 cut(s)	724, 754, 1558
BssECI	CCNNGG	9 cut(s)	138, 171, 418, 525, 899, 1384, 1498, 1592, 1593
BssMI	GATC	5 cut(s)	422, 1076, 1226, 1295, 1487
BssNI	GRCGYC	2 cut(s)	5, 1201
BssT1I	CCWWGG	2 cut(s)	171, 418
Bst4CI	ACNGT	8 cut(s)	163, 232, 302, 482, 697, 717, 871, 943
Bst6I	CTCTTC	1 cut(s)	527
BstACI	GRCGYC	2 cut(s)	5, 1201
BstAUI	TGTACA	1 cut(s)	1159
BstC8I	GCNNGC	1 cut(s)	903
BstDEI	CTNAG	5 cut(s)	212, 492, 688, 795, 1524
BstDSI	CCRYGG	4 cut(s)	171, 418, 899, 1498
BstF5I	GGATG	4 cut(s)	156, 241, 397, 1396
BstFNI	CGCG	1 cut(s)	901
BstH2I	RGCGCY	1 cut(s)	33
BstHHI	GCGC	1 cut(s)	32
BstKTI	GATC	5 cut(s)	425, 1079, 1229, 1298, 1490
BstMAI	GTCTC	2 cut(s)	12, 90
BstMBI	GATC	5 cut(s)	422, 1076, 1226, 1295, 1487
BstMWI	GCNNNNNNNGC	4 cut(s)	29, 911, 1175, 1568
BstNSI	RCATGY	1 cut(s)	866
BstSCI	CCNGG	3 cut(s)	1383, 1592, 1593
BstSLI	GKGCMC	2 cut(s)	1005, 1171
BstUI	CGCG	1 cut(s)	901
BstV1I	GCAGC	4 cut(s)	25, 898, 1452, 1583
BstV2I	GAAGAC	1 cut(s)	370
BstX2I	RGATCY	3 cut(s)	1076, 1226, 1295
BstYI	RGATCY	3 cut(s)	1076, 1226, 1295
BsuI	GTATCC	3 cut(s)	611, 1274, 1349
BsuRI	GGCC	4 cut(s)	905, 989, 1437, 1497
BtgI	CCRYGG	4 cut(s)	171, 418, 899, 1498
BtrI	CACGTC	1 cut(s)	1406
BtsCI	GGATG	4 cut(s)	156, 241, 397, 1396
BtsIMutI	CAGTG	1 cut(s)	220
BveI	ACCTGC	1 cut(s)	931
Cac8I	GCNNGC	1 cut(s)	903
CaiI	CAGNNNCTG	1 cut(s)	695
CciI	TCATGA	1 cut(s)	1188
CfoI	GCGC	1 cut(s)	32
Cfr10I	RCCGGY	3 cut(s)	724, 754, 1558
Cfr13I	GGNCC	6 cut(s)	903, 1319, 1343, 1394, 1495, 1556
Cfr42I	CCGCGG	1 cut(s)	902
Cfr9I	CCCGGG	1 cut(s)	1593
Csp6I	GTAC	6 cut(s)	64, 743, 1160, 1306, 1330, 1381
CspAI	ACCGGT	1 cut(s)	754
CviAII	CATG	7 cut(s)	172, 419, 485, 640, 863, 1043, 1189
CviQI	GTAC	6 cut(s)	64, 743, 1160, 1306, 1330, 1381
DdeI	CTNAG	5 cut(s)	212, 492, 688, 795, 1524
DpnI	GATC	5 cut(s)	424, 1078, 1228, 1297, 1489
DpnII	GATC	5 cut(s)	422, 1076, 1226, 1295, 1487
DraI	TTTAAA	1 cut(s)	1066
EaeI	YGGCCR	1 cut(s)	1435
Eam1104I	CTCTTC	1 cut(s)	527
EarI	CTCTTC	1 cut(s)	527
EciI	GGCGGA	2 cut(s)	749, 1107
Eco130I	CCWWGG	2 cut(s)	171, 418
Eco47I	GGWCC	4 cut(s)	1319, 1343, 1394, 1556
Eco57I	CTGAAG	6 cut(s)	44, 364, 534, 726, 804, 1569
Eco88I	CYCGRG	2 cut(s)	137, 1593
EcoO109I	RGGNCCY	1 cut(s)	1319
EcoRI	GAATTC	1 cut(s)	1139
EcoT14I	CCWWGG	2 cut(s)	171, 418
EcoT22I	ATGCAT	1 cut(s)	52
ErhI	CCWWGG	2 cut(s)	171, 418
Esp3I	CGTCTC	1 cut(s)	12
FaeI	CATG	7 cut(s)	175, 422, 488, 643, 866, 1046, 1192
FalI	AAGNNNNNCTT	2 cut(s)	432, 464
FaqI	GGGAC	4 cut(s)	527, 874, 1288, 1332
FatI	CATG	7 cut(s)	171, 418, 484, 639, 862, 1042, 1188
FauI	CCCGC	2 cut(s)	667, 894
FauNDI	CATATG	1 cut(s)	805
Fnu4HI	GCNGC	7 cut(s)	14, 355, 899, 912, 1438, 1441, 1572
FokI	GGATG	4 cut(s)	163, 248, 404, 1403
Fsp4HI	GCNGC	7 cut(s)	14, 355, 899, 912, 1438, 1441, 1572
FspBI	CTAG	3 cut(s)	27, 983, 1172
GlaI	GCGC	1 cut(s)	31
GluI	GCNGC	7 cut(s)	14, 355, 899, 912, 1438, 1441, 1572
GsuI	CTGGAG	2 cut(s)	72, 912
HaeII	RGCGCY	1 cut(s)	33
HaeIII	GGCC	4 cut(s)	905, 989, 1437, 1497
HapII	CCGG	6 cut(s)	725, 755, 1360, 1384, 1559, 1594
HhaI	GCGC	1 cut(s)	32
Hin1I	GRCGYC	2 cut(s)	5, 1201
Hin1II	CATG	7 cut(s)	175, 422, 488, 643, 866, 1046, 1192
Hin6I	GCGC	1 cut(s)	30
HinP1I	GCGC	1 cut(s)	30
HincII	GTYRAC	1 cut(s)	403
HindII	GTYRAC	1 cut(s)	403
HindIII	AAGCTT	1 cut(s)	325
HinfI	GANTC	7 cut(s)	245, 395, 593, 611, 647, 737, 1543
HpaI	GTTAAC	1 cut(s)	403
HpaII	CCGG	6 cut(s)	725, 755, 1360, 1384, 1559, 1594
HphI	GGTGA	3 cut(s)	514, 1173, 1517
Hpy166II	GTNNAC	5 cut(s)	100, 403, 673, 1169, 1556
Hpy188III	TCNNGA	9 cut(s)	89, 113, 242, 512, 615, 1084, 1144, 1189, 1266
Hpy8I	GTNNAC	5 cut(s)	100, 403, 673, 1169, 1556
Hpy99I	CGWCG	1 cut(s)	578
HpyAV	CCTTC	7 cut(s)	68, 477, 823, 992, 1263, 1286, 1461
HpyCH4III	ACNGT	8 cut(s)	163, 232, 302, 482, 697, 717, 871, 943
HpyCH4IV	ACGT	3 cut(s)	96, 1201, 1405
HpyCH4V	TGCA	7 cut(s)	50, 218, 860, 1151, 1169, 1370, 1571
HpyF10VI	GCNNNNNNNGC	4 cut(s)	29, 911, 1175, 1568
HpyF3I	CTNAG	5 cut(s)	212, 492, 688, 795, 1524
HpySE526I	ACGT	3 cut(s)	96, 1201, 1405
Hsp92I	GRCGYC	2 cut(s)	5, 1201
Hsp92II	CATG	7 cut(s)	175, 422, 488, 643, 866, 1046, 1192
HspAI	GCGC	1 cut(s)	30
KpnI	GGTACC	1 cut(s)	1384
KspAI	GTTAAC	1 cut(s)	403
KspI	CCGCGG	1 cut(s)	902
Kzo9I	GATC	5 cut(s)	422, 1076, 1226, 1295, 1487
LmnI	GCTCC	6 cut(s)	448, 457, 859, 919, 931, 1594
Lsp1109I	GCAGC	4 cut(s)	25, 898, 1452, 1583
LweI	GCATC	4 cut(s)	226, 667, 671, 1357
MaeI	CTAG	3 cut(s)	27, 983, 1172
MaeII	ACGT	3 cut(s)	96, 1201, 1405
MaeIII	GTNAC	6 cut(s)	163, 226, 274, 499, 520, 931
MalI	GATC	5 cut(s)	424, 1078, 1228, 1297, 1489
MboI	GATC	5 cut(s)	422, 1076, 1226, 1295, 1487
MboII	GAAGA	8 cut(s)	319, 322, 370, 527, 544, 797, 980, 1266
MfeI	CAATTG	2 cut(s)	546, 813
MflI	RGATCY	3 cut(s)	1076, 1226, 1295
MhlI	GDGCHC	4 cut(s)	96, 841, 1005, 1171
MluCI	AATT	8 cut(s)	288, 314, 451, 546, 813, 1061, 1139, 1457
MmeI	TCCRAC	1 cut(s)	1333
Mph1103I	ATGCAT	1 cut(s)	52
MroXI	GAANNNNTTC	1 cut(s)	1258
MseI	TTAA	6 cut(s)	252, 402, 450, 1065, 1194, 1566
MspA1I	CMGCKG	1 cut(s)	901
MspI	CCGG	6 cut(s)	725, 755, 1360, 1384, 1559, 1594
MspR9I	CCNGG	3 cut(s)	1385, 1594, 1595
MunI	CAATTG	2 cut(s)	546, 813
Mva1269I	GAATGC	1 cut(s)	1153
MvnI	CGCG	1 cut(s)	901
MwoI	GCNNNNNNNGC	4 cut(s)	29, 911, 1175, 1568
NciI	CCSGG	3 cut(s)	1385, 1594, 1595
NcoI	CCATGG	2 cut(s)	171, 418
NdeI	CATATG	1 cut(s)	805
NdeII	GATC	5 cut(s)	422, 1076, 1226, 1295, 1487
NlaIII	CATG	7 cut(s)	175, 422, 488, 643, 866, 1046, 1192
NlaIV	GGNNCC	7 cut(s)	339, 627, 753, 977, 1078, 1320, 1382
NmuCI	GTSAC	2 cut(s)	274, 520
NsiI	ATGCAT	1 cut(s)	52
NspI	RCATGY	1 cut(s)	866
PagI	TCATGA	1 cut(s)	1188
PcsI	WCGNNNNNNNCGW	1 cut(s)	1543
PctI	GAATGC	1 cut(s)	1153
PdmI	GAANNNNTTC	1 cut(s)	1258
PfeI	GAWTC	7 cut(s)	245, 395, 593, 611, 647, 737, 1543
PflMI	CCANNNNNTGG	1 cut(s)	76
PinAI	ACCGGT	1 cut(s)	754
PkrI	GCNGC	7 cut(s)	15, 356, 900, 913, 1439, 1442, 1573
PpuMI	RGGWCCY	1 cut(s)	1319
PshBI	ATTAAT	1 cut(s)	1194
PsiI	TTATAA	2 cut(s)	287, 1032
Psp5II	RGGWCCY	1 cut(s)	1319
PspN4I	GGNNCC	7 cut(s)	339, 627, 753, 977, 1078, 1320, 1382
PspPI	GGNCC	6 cut(s)	903, 1319, 1343, 1394, 1495, 1556
PspPPI	RGGWCCY	1 cut(s)	1319
PsrI	GAACNNNNNNTAC	2 cut(s)	492, 524
PstNI	CAGNNNCTG	1 cut(s)	695
PsuI	RGATCY	3 cut(s)	1076, 1226, 1295
RsaI	GTAC	6 cut(s)	65, 744, 1161, 1307, 1331, 1382
RsaNI	GTAC	6 cut(s)	64, 743, 1160, 1306, 1330, 1381
SacII	CCGCGG	1 cut(s)	902
SaqAI	TTAA	6 cut(s)	252, 402, 450, 1065, 1194, 1566
SatI	GCNGC	7 cut(s)	14, 355, 899, 912, 1438, 1441, 1572
Sau3AI	GATC	5 cut(s)	422, 1076, 1226, 1295, 1487
Sau96I	GGNCC	6 cut(s)	903, 1319, 1343, 1394, 1495, 1556
ScaI	AGTACT	1 cut(s)	65
ScrFI	CCNGG	3 cut(s)	1385, 1594, 1595
SduI	GDGCHC	4 cut(s)	96, 841, 1005, 1171
SfaNI	GCATC	4 cut(s)	226, 667, 671, 1357
Sfr303I	CCGCGG	1 cut(s)	902
SgrAI	CRCCGGYG	1 cut(s)	754
SgrBI	CCGCGG	1 cut(s)	902
SinI	GGWCC	4 cut(s)	1319, 1343, 1394, 1556
SmaI	CCCGGG	1 cut(s)	1595
SmlI	CTYRAG	1 cut(s)	240
SmoI	CTYRAG	1 cut(s)	240
Sse9I	AATT	8 cut(s)	288, 314, 451, 546, 813, 1061, 1139, 1457
SsiI	CCGC	8 cut(s)	11, 354, 660, 734, 899, 901, 1092, 1438
SspMI	CTAG	3 cut(s)	27, 983, 1172
StyD4I	CCNGG	3 cut(s)	1383, 1592, 1593
StyI	CCWWGG	2 cut(s)	171, 418
TaaI	ACNGT	8 cut(s)	163, 232, 302, 482, 697, 717, 871, 943
TaiI	ACGT	3 cut(s)	99, 1204, 1408
TaqI	TCGA	4 cut(s)	576, 1143, 1215, 1237
TasI	AATT	8 cut(s)	288, 314, 451, 546, 813, 1061, 1139, 1457
TatI	WGTACW	3 cut(s)	63, 742, 1159
TauI	GCSGC	3 cut(s)	357, 901, 1440
TfiI	GAWTC	7 cut(s)	245, 395, 593, 611, 647, 737, 1543
Tru1I	TTAA	6 cut(s)	252, 402, 450, 1065, 1194, 1566
Tru9I	TTAA	6 cut(s)	252, 402, 450, 1065, 1194, 1566
TscAI	CASTG	1 cut(s)	220
TseFI	GTSAC	2 cut(s)	274, 520
TseI	GCWGC	4 cut(s)	13, 911, 1440, 1571
Tsp45I	GTSAC	2 cut(s)	274, 520
TspDTI	ATGAA	5 cut(s)	170, 594, 842, 1074, 1251
TspMI	CCCGGG	1 cut(s)	1593
TspRI	CASTG	1 cut(s)	220
Van91I	CCANNNNNTGG	1 cut(s)	76
VneI	GTGCAC	1 cut(s)	1167
VpaK11BI	GGWCC	4 cut(s)	1319, 1343, 1394, 1556
VspI	ATTAAT	1 cut(s)	1194
XapI	RAATTY	4 cut(s)	314, 1061, 1139, 1457
XceI	RCATGY	1 cut(s)	866
XmaI	CCCGGG	1 cut(s)	1593
XmnI	GAANNNNTTC	1 cut(s)	1258
XspI	CTAG	3 cut(s)	27, 983, 1172
ZraI	GACGTC	1 cut(s)	1202
ZrmI	AGTACT	1 cut(s)	65
Zsp2I	ATGCAT	1 cut(s)	52

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.