Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0010242

Physical Location & Seq

Genomic Coordinates Reverse (-)

24357690 .. 24362081

Gene Structure 4392 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00185040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGCGTCCCCGGCGGTGCAGCAGCAAGTAGCCCCTACTGCCGATGTGGTCGGCAATGCGTTTGTTCTTCAGTACTACCATATCTTGGAGCAGTCTCCTGAGCATGTTTACCGATTTTATCAAGATGATAGTAAGTTTGGTCGCCCCGAGGATAATGGGATGATGAAGACTGTAACCACCATGGATATAATCAACAGGAAAATAGTTGAGAATGGGAAGCTCAGTGCAAATGTTGTAACTGTGGATGCTCAAGAATCTTTCAATAGGGGTGTATTTGTCCTTGTAACTGGGTTTATAATTGGAAAGGACAATTTGAGGAAAAAATTTACCCAAAGCTTTTTCTTGGCACCACAAGAGAAAGGTGGCTTCTATGTTTTGAATGATGTTTTCAGATATGTGGATGATTCCATTCACCAAAATACGGACCATGGTTCAGTTGCTGATGTTGAACCTCCTCTTACTTTGGAGCACGATCCTTCTTTTCCAGACAGTTGTGTTTCTGAGCCTGTTACTGCTGTTTCTGAAGACGTCTCTGAGGAGGAAGTATATAATCCTCCTGAGAATGGGGAAGTTCCAATTGAAGTAGAGGAAATTCCAGTACCTGAAGTTGTCGATGAAATCCCAGATGATTCAGAGGTAGTGACTGAATCTGGATACTCGGCACCGGTTGTGGCCATGGTGGAATCTGAGAAACCTGCATCGGTGGTGGACGATGCTAAATACTCAGCAACTGTGGTGGCTGAAGCTGGACGTTCTGCACCGGTGGTGGCAGAATCTGCACAATCGGCACCGGTGGTGGTTGGATGTACTCCTAAATCAGAAGAAGTCCCTAAGAAGTCATATGCCTCAATTGTTAAGGTTATGAAGGAGAGTGCTTTACCATTTTCTACTCCTGCACATGCTTCTGTGAGAGCTATCCCAAAGCCCCAAGAGCAGCGGGTCATTGCTGCTCCACAACCTGCTTCAGTTTCTGAAACAGTAGTTTCCAGCACAAATGCTAAAGAAGATGGGAACCAACCAGAGGCTGAAGTTGAAGGGCACTCTATCTACATCAAAGGTCTGCCTTTTAATGCCACACCTGCTCTAATAGAGAATGAATTCAAAAAATTTGGACCCATCAAGAATGGTGGTGTACAAGTTAGAACTCAAAAGGGCTTTGGTTTTGGGTTTGTGGAATTTGAGGATGCGAGTGCTGTACAAAGTGCACTAGAGGCTTCACCCATCATGATTAATGGGCGCCAAGTTGTTGTTGAGGAAAAGAGATCTACGAGTCGAGGGGGGAATAGGGGAAGGTTTTCGTCTGGAAGGGGAGTGGATATAGGAATGAAGGACCTAATGGGTACAGGAATGAAGGACCTAATGGATACAGAAATGATGGACCTAATGCTGGATACCGAAATGATGCACCTAATGGATACCGGAGTGAGGGACCAAGAGGACGTGGAGGCTATGGAGGTGGTAGAGGTTATGGCCGCAGTGAATTCAAGTCCGAATTTGGAGGTAGGAATACAGGTAGGGGAGGATCATCGGGCCGTGGAGGTGATGGGTATCAGAGGTCTGAGAATGGTGGTCGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006508 GO:0006807 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010494 GO:0016236 GO:0016579 GO:0019538 GO:0032386 GO:0032879 GO:0032991 GO:0034517 GO:0035770 GO:0035973 GO:0036211 GO:0036464 GO:0043021 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051049 GO:0060341 GO:0060627 GO:0060628 GO:0061912 GO:0061919 GO:0065007 GO:0070646 GO:0070647 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1905538 GO:1990861 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTF2 RRM_1

Protein Analysis

525

Amino Acids

56.97

Weight (kDa)

4.57

Isoelectric Point (pI)

47.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTF2	PF02136	17 - 132	2.1e-27	Nuclear transport factor 2 (NTF2) domain
RRM_1	PF00076	349 - 414	1e-11	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010242)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25150 AT3G25150
fragaria_vesca	FvH4_2g18460 FvH4_2g18460 FvH4_2g18460
malus_domestica	MD05G1170400.v1.1 MD10G1158600.v1.1
prunus_persica	Prupe.8G197600_v2.0.a1
pyrus_communis	pycom05g15760 pycom10g13710
rosa_chinensis	RchiOBHm_Chr6g0283941
rosa_laevigata	RLG00000012785
rosa_multiflora	Rmu_ssc0000442.1_g000025
rosa_roxburghii	Rroxscaffold_7G00185040
rosa_rugosa	Rorug06G0158600 Rorug06G0158700
rosa_samantha	Rh6AG271900 Rh6BG272800 Rh6CG274000 Rh6DG267000
rosa_wichuraiana	Rw6G023430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	296
AarI	CACCTGC	1 cut(s)	1087
AatII	GACGTC	1 cut(s)	531
Acc36I	ACCTGC	3 cut(s)	703, 967, 1087
AccB1I	GGYRCC	4 cut(s)	346, 661, 787, 1236
AccB7I	CCANNNNNTGG	1 cut(s)	85
AciI	CCGC	3 cut(s)	14, 937, 1473
AclWI	GGATC	2 cut(s)	467, 1530
AcoI	YGGCCR	2 cut(s)	672, 1470
AcsI	RAATTY	7 cut(s)	323, 591, 1097, 1106, 1175, 1480, 1492
AcuI	CTGAAG	6 cut(s)	53, 543, 624, 762, 948, 1047
AcyI	GRCGYC	3 cut(s)	5, 528, 1237
AfaI	GTAC	6 cut(s)	74, 600, 808, 1134, 1197, 1342
AfiI	CCNNNNNNNGG	6 cut(s)	85, 421, 563, 1021, 1387, 1425
AgeI	ACCGGT	3 cut(s)	664, 760, 790
AgsI	TTSAA	7 cut(s)	262, 379, 449, 581, 1034, 1102, 1485
AjiI	CACGTC	1 cut(s)	1441
AluBI	AGCT	4 cut(s)	220, 336, 746, 914
AluI	AGCT	4 cut(s)	220, 336, 746, 914
Alw21I	GWGCWC	2 cut(s)	471, 1207
Alw26I	GTCTC	2 cut(s)	99, 535
Alw44I	GTGCAC	1 cut(s)	1203
AlwI	GGATC	2 cut(s)	467, 1530
AlwNI	CAGNNNCTG	6 cut(s)	440, 602, 731, 776, 971, 1025
Ama87I	CYCGRG	1 cut(s)	146
AoxI	GGCC	3 cut(s)	672, 1470, 1530
ApaLI	GTGCAC	1 cut(s)	1203
ApeKI	GCWGC	4 cut(s)	19, 22, 934, 947
ApoI	RAATTY	7 cut(s)	323, 591, 1097, 1106, 1175, 1480, 1492
AseI	ATTAAT	1 cut(s)	1230
AsiGI	ACCGGT	3 cut(s)	664, 760, 790
Asp700I	GAANNNNTTC	2 cut(s)	1097, 1294
AspLEI	GCGC	1 cut(s)	1239
AspS9I	GGNCC	7 cut(s)	424, 1112, 1330, 1354, 1378, 1429, 1530
AsuC2I	CCSGG	1 cut(s)	11
AsuHPI	GGTGA	3 cut(s)	404, 1209, 1552
AvaI	CYCGRG	1 cut(s)	146
AvaII	GGWCC	6 cut(s)	424, 1112, 1330, 1354, 1378, 1429
BaeGI	GKGCMC	2 cut(s)	1041, 1207
BaeI	ACNNNNGTAYC	2 cut(s)	1407, 1440
BalI	TGGCCA	1 cut(s)	674
BanI	GGYRCC	4 cut(s)	346, 661, 787, 1236
BbsI	GAAGAC	2 cut(s)	173, 531
Bbv12I	GWGCWC	2 cut(s)	471, 1207
BbvI	GCAGC	4 cut(s)	31, 34, 934, 946
BccI	CCATC	5 cut(s)	1001, 1124, 1229, 1369, 1537
BceAI	ACGGC	1 cut(s)	1517
BciVI	GTATCC	4 cut(s)	647, 1357, 1384, 1408
BcnI	CCSGG	1 cut(s)	11
BcoDI	GTCTC	2 cut(s)	99, 535
BfaI	CTAG	1 cut(s)	1208
BfoI	RGCGCY	1 cut(s)	1240
BfuAI	ACCTGC	3 cut(s)	703, 967, 1087
BfuI	GTATCC	4 cut(s)	647, 1357, 1384, 1408
BglII	AGATCT	1 cut(s)	1262
BisI	GCNGC	5 cut(s)	20, 23, 935, 948, 1473
BlsI	GCNGC	5 cut(s)	21, 24, 936, 949, 1474
BmcAI	AGTACT	1 cut(s)	74
Bme1390I	CCNGG	1 cut(s)	11
Bme18I	GGWCC	6 cut(s)	424, 1112, 1330, 1354, 1378, 1429
BmeT110I	CYCGRG	1 cut(s)	146
BmgBI	CACGTC	1 cut(s)	1441
BmgT120I	GGNCC	7 cut(s)	424, 1112, 1330, 1354, 1378, 1429, 1530
BmiI	GGNNCC	7 cut(s)	348, 663, 789, 1013, 1114, 1238, 1430
BmrFI	CCNGG	1 cut(s)	11
BmrI	ACTGGG	1 cut(s)	297
BmsI	GCATC	5 cut(s)	235, 703, 707, 1174, 1392
BmuI	ACTGGG	1 cut(s)	297
BpiI	GAAGAC	2 cut(s)	173, 531
Bpu10I	CCTNAGC	1 cut(s)	99
BpuEI	CTTGAG	1 cut(s)	234
BpuMI	CCSGG	1 cut(s)	11
BsaBI	GATNNNNATC	1 cut(s)	1547
BsaHI	GRCGYC	3 cut(s)	5, 528, 1237
BsaJI	CCNNGG	6 cut(s)	9, 147, 180, 427, 675, 1533
BsaWI	WCCGGW	4 cut(s)	664, 760, 790, 1418
Bsc4I	CCNNNNNNNGG	6 cut(s)	85, 421, 563, 1021, 1387, 1425
Bse118I	RCCGGY	3 cut(s)	664, 760, 790
Bse1I	ACTGG	2 cut(s)	292, 596
Bse3DI	GCAATG	2 cut(s)	61, 942
Bse8I	GATNNNNATC	1 cut(s)	1547
BseDI	CCNNGG	6 cut(s)	9, 147, 180, 427, 675, 1533
BseGI	GGATG	5 cut(s)	165, 250, 406, 809, 1189
BseJI	GATNNNNATC	1 cut(s)	1547
BseLI	CCNNNNNNNGG	6 cut(s)	85, 421, 563, 1021, 1387, 1425
BseMI	GCAATG	2 cut(s)	61, 942
BseMII	CTCAG	8 cut(s)	90, 235, 492, 525, 549, 678, 738, 1550
BseNI	ACTGG	2 cut(s)	292, 596
BseRI	GAGGAG	2 cut(s)	444, 551
BseSI	GKGCMC	2 cut(s)	1041, 1207
BseXI	GCAGC	4 cut(s)	31, 34, 934, 946
BsgI	GTGCAG	4 cut(s)	38, 741, 762, 879
BshFI	GGCC	3 cut(s)	674, 1472, 1532
BshNI	GGYRCC	4 cut(s)	346, 661, 787, 1236
BshTI	ACCGGT	3 cut(s)	664, 760, 790
BsiHKAI	GWGCWC	2 cut(s)	471, 1207
BsiHKCI	CYCGRG	1 cut(s)	146
BsiSI	CCGG	5 cut(s)	11, 665, 761, 791, 1419
BslFI	GGGAC	2 cut(s)	812, 1442
BslI	CCNNNNNNNGG	6 cut(s)	85, 421, 563, 1021, 1387, 1425
BsmAI	GTCTC	2 cut(s)	99, 535
BsmBI	CGTCTC	1 cut(s)	535
BsmFI	GGGAC	2 cut(s)	812, 1442
BsnI	GGCC	3 cut(s)	674, 1472, 1532
BsoBI	CYCGRG	1 cut(s)	146
Bsp1286I	GDGCHC	3 cut(s)	471, 1041, 1207
Bsp1407I	TGTACA	2 cut(s)	1132, 1195
Bsp143I	GATC	3 cut(s)	472, 1262, 1522
Bsp19I	CCATGG	3 cut(s)	180, 427, 675
BspACI	CCGC	3 cut(s)	14, 937, 1473
BspANI	GGCC	3 cut(s)	674, 1472, 1532
BspCNI	CTCAG	8 cut(s)	91, 234, 493, 526, 550, 679, 737, 1551
BspHI	TCATGA	1 cut(s)	1224
BspLI	GGNNCC	7 cut(s)	348, 663, 789, 1013, 1114, 1238, 1430
BspMI	ACCTGC	3 cut(s)	703, 967, 1087
BspPI	GGATC	2 cut(s)	467, 1530
BspT107I	GGYRCC	4 cut(s)	346, 661, 787, 1236
BsrDI	GCAATG	2 cut(s)	61, 942
BsrFI	RCCGGY	3 cut(s)	664, 760, 790
BsrGI	TGTACA	2 cut(s)	1132, 1195
BsrI	ACTGG	2 cut(s)	292, 596
BssAI	RCCGGY	3 cut(s)	664, 760, 790
BssECI	CCNNGG	6 cut(s)	9, 147, 180, 427, 675, 1533
BssMI	GATC	3 cut(s)	472, 1262, 1522
BssNI	GRCGYC	3 cut(s)	5, 528, 1237
BssT1I	CCWWGG	3 cut(s)	180, 427, 675
Bst4CI	ACNGT	5 cut(s)	172, 241, 491, 733, 979
BstACI	GRCGYC	3 cut(s)	5, 528, 1237
BstAPI	GCANNNNNTGC	1 cut(s)	776
BstAUI	TGTACA	2 cut(s)	1132, 1195
BstDEI	CTNAG	9 cut(s)	99, 221, 501, 534, 558, 687, 724, 831, 1559
BstDSI	CCRYGG	4 cut(s)	180, 427, 675, 1533
BstF5I	GGATG	5 cut(s)	165, 250, 406, 809, 1189
BstH2I	RGCGCY	1 cut(s)	1240
BstHHI	GCGC	1 cut(s)	1239
BstKTI	GATC	3 cut(s)	475, 1265, 1525
BstMAI	GTCTC	2 cut(s)	99, 535
BstMBI	GATC	3 cut(s)	472, 1262, 1522
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 38, 776, 785, 931, 1079, 1211
BstNSI	RCATGY	2 cut(s)	107, 902
BstSCI	CCNGG	1 cut(s)	9
BstSLI	GKGCMC	2 cut(s)	1041, 1207
BstV1I	GCAGC	4 cut(s)	31, 34, 934, 946
BstV2I	GAAGAC	2 cut(s)	173, 531
BstX2I	RGATCY	1 cut(s)	1262
BstYI	RGATCY	1 cut(s)	1262
BsuI	GTATCC	4 cut(s)	647, 1357, 1384, 1408
BsuRI	GGCC	3 cut(s)	674, 1472, 1532
BtgI	CCRYGG	4 cut(s)	180, 427, 675, 1533
BtrI	CACGTC	1 cut(s)	1441
BtsCI	GGATG	5 cut(s)	165, 250, 406, 809, 1189
BtsI	GCAGTG	1 cut(s)	1482
BtsIMutI	CAGTG	2 cut(s)	229, 1482
BveI	ACCTGC	3 cut(s)	703, 967, 1087
CaiI	CAGNNNCTG	6 cut(s)	440, 602, 731, 776, 971, 1025
CciI	TCATGA	1 cut(s)	1224
CfoI	GCGC	1 cut(s)	1239
Cfr10I	RCCGGY	3 cut(s)	664, 760, 790
Cfr13I	GGNCC	7 cut(s)	424, 1112, 1330, 1354, 1378, 1429, 1530
Csp6I	GTAC	6 cut(s)	73, 599, 807, 1133, 1196, 1341
CspAI	ACCGGT	3 cut(s)	664, 760, 790
CspCI	CAANNNNNGTGG	4 cut(s)	717, 752, 1108, 1143
CviAII	CATG	6 cut(s)	104, 181, 428, 676, 899, 1225
CviQI	GTAC	6 cut(s)	73, 599, 807, 1133, 1196, 1341
DdeI	CTNAG	9 cut(s)	99, 221, 501, 534, 558, 687, 724, 831, 1559
DinI	GGCGCC	1 cut(s)	1238
DpnI	GATC	3 cut(s)	474, 1264, 1524
DpnII	GATC	3 cut(s)	472, 1262, 1522
EaeI	YGGCCR	2 cut(s)	672, 1470
Eco130I	CCWWGG	3 cut(s)	180, 427, 675
Eco47I	GGWCC	6 cut(s)	424, 1112, 1330, 1354, 1378, 1429
Eco57I	CTGAAG	6 cut(s)	53, 543, 624, 762, 948, 1047
Eco88I	CYCGRG	1 cut(s)	146
EcoO109I	RGGNCCY	2 cut(s)	1330, 1354
EcoRI	GAATTC	2 cut(s)	1097, 1480
EcoT14I	CCWWGG	3 cut(s)	180, 427, 675
EgeI	GGCGCC	1 cut(s)	1238
EheI	GGCGCC	1 cut(s)	1238
ErhI	CCWWGG	3 cut(s)	180, 427, 675
Esp3I	CGTCTC	1 cut(s)	535
FaeI	CATG	6 cut(s)	107, 184, 431, 679, 902, 1228
FaqI	GGGAC	2 cut(s)	812, 1442
FatI	CATG	6 cut(s)	103, 180, 427, 675, 898, 1224
FauI	CCCGC	1 cut(s)	930
FauNDI	CATATG	1 cut(s)	841
Fnu4HI	GCNGC	5 cut(s)	20, 23, 935, 948, 1473
FokI	GGATG	5 cut(s)	172, 257, 413, 816, 1196
Fsp4HI	GCNGC	5 cut(s)	20, 23, 935, 948, 1473
FspBI	CTAG	1 cut(s)	1208
GlaI	GCGC	1 cut(s)	1238
GluI	GCNGC	5 cut(s)	20, 23, 935, 948, 1473
HaeII	RGCGCY	1 cut(s)	1240
HaeIII	GGCC	3 cut(s)	674, 1472, 1532
HapII	CCGG	5 cut(s)	11, 665, 761, 791, 1419
HhaI	GCGC	1 cut(s)	1239
Hin1I	GRCGYC	3 cut(s)	5, 528, 1237
Hin1II	CATG	6 cut(s)	107, 184, 431, 679, 902, 1228
Hin6I	GCGC	1 cut(s)	1237
HinP1I	GCGC	1 cut(s)	1237
HindIII	AAGCTT	1 cut(s)	334
HinfI	GANTC	7 cut(s)	254, 404, 629, 647, 683, 773, 1270
HpaII	CCGG	5 cut(s)	11, 665, 761, 791, 1419
HphI	GGTGA	3 cut(s)	404, 1209, 1552
Hpy166II	GTNNAC	4 cut(s)	109, 709, 1133, 1205
Hpy188III	TCNNGA	9 cut(s)	98, 122, 251, 485, 557, 651, 1120, 1225, 1302
Hpy8I	GTNNAC	4 cut(s)	109, 709, 1133, 1205
HpyAV	CCTTC	7 cut(s)	486, 859, 1028, 1284, 1299, 1321, 1345
HpyCH4III	ACNGT	5 cut(s)	172, 241, 491, 733, 979
HpyCH4IV	ACGT	3 cut(s)	528, 751, 1440
HpyCH4V	TGCA	8 cut(s)	19, 227, 698, 758, 779, 896, 1205, 1405
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 38, 776, 785, 931, 1079, 1211
HpyF3I	CTNAG	9 cut(s)	99, 221, 501, 534, 558, 687, 724, 831, 1559
HpySE526I	ACGT	3 cut(s)	528, 751, 1440
Hsp92I	GRCGYC	3 cut(s)	5, 528, 1237
Hsp92II	CATG	6 cut(s)	107, 184, 431, 679, 902, 1228
HspAI	GCGC	1 cut(s)	1237
KasI	GGCGCC	1 cut(s)	1236
Kzo9I	GATC	3 cut(s)	472, 1262, 1522
LmnI	GCTCC	3 cut(s)	88, 466, 955
Lsp1109I	GCAGC	4 cut(s)	31, 34, 934, 946
LweI	GCATC	5 cut(s)	235, 703, 707, 1174, 1392
MaeI	CTAG	1 cut(s)	1208
MaeII	ACGT	3 cut(s)	528, 751, 1440
MaeIII	GTNAC	5 cut(s)	172, 235, 283, 508, 640
MalI	GATC	3 cut(s)	474, 1264, 1524
MboI	GATC	3 cut(s)	472, 1262, 1522
MboII	GAAGA	5 cut(s)	59, 178, 536, 833, 1016
MfeI	CAATTG	2 cut(s)	576, 849
MflI	RGATCY	1 cut(s)	1262
MhlI	GDGCHC	3 cut(s)	471, 1041, 1207
MlsI	TGGCCA	1 cut(s)	674
MluNI	TGGCCA	1 cut(s)	674
Mly113I	GGCGCC	1 cut(s)	1237
MlyI	GAGTC	1 cut(s)	1279
MmeI	TCCRAC	1 cut(s)	781
Mox20I	TGGCCA	1 cut(s)	674
MroXI	GAANNNNTTC	2 cut(s)	1097, 1294
MscI	TGGCCA	1 cut(s)	674
MseI	TTAA	3 cut(s)	855, 1068, 1230
Msp20I	TGGCCA	1 cut(s)	674
MspA1I	CMGCKG	1 cut(s)	937
MspI	CCGG	5 cut(s)	11, 665, 761, 791, 1419
MspR9I	CCNGG	1 cut(s)	11
MunI	CAATTG	2 cut(s)	576, 849
MwoI	GCNNNNNNNGC	7 cut(s)	11, 38, 776, 785, 931, 1079, 1211
NarI	GGCGCC	1 cut(s)	1237
NciI	CCSGG	1 cut(s)	11
NcoI	CCATGG	3 cut(s)	180, 427, 675
NdeI	CATATG	1 cut(s)	841
NdeII	GATC	3 cut(s)	472, 1262, 1522
NlaIII	CATG	6 cut(s)	107, 184, 431, 679, 902, 1228
NlaIV	GGNNCC	7 cut(s)	348, 663, 789, 1013, 1114, 1238, 1430
NmeAIII	GCCGAG	1 cut(s)	638
NmuCI	GTSAC	1 cut(s)	640
NspI	RCATGY	2 cut(s)	107, 902
PagI	TCATGA	1 cut(s)	1224
PaqCI	CACCTGC	1 cut(s)	1087
PdmI	GAANNNNTTC	2 cut(s)	1097, 1294
PfeI	GAWTC	6 cut(s)	254, 404, 629, 647, 683, 773
PflMI	CCANNNNNTGG	1 cut(s)	85
PinAI	ACCGGT	3 cut(s)	664, 760, 790
PkrI	GCNGC	5 cut(s)	21, 24, 936, 949, 1474
PleI	GAGTC	1 cut(s)	1278
PluTI	GGCGCC	1 cut(s)	1240
PpsI	GAGTC	1 cut(s)	1278
PpuMI	RGGWCCY	2 cut(s)	1330, 1354
PshBI	ATTAAT	1 cut(s)	1230
PsiI	TTATAA	1 cut(s)	296
Psp5II	RGGWCCY	2 cut(s)	1330, 1354
PspN4I	GGNNCC	7 cut(s)	348, 663, 789, 1013, 1114, 1238, 1430
PspPI	GGNCC	7 cut(s)	424, 1112, 1330, 1354, 1378, 1429, 1530
PspPPI	RGGWCCY	2 cut(s)	1330, 1354
PstNI	CAGNNNCTG	6 cut(s)	440, 602, 731, 776, 971, 1025
PsuI	RGATCY	1 cut(s)	1262
RsaI	GTAC	6 cut(s)	74, 600, 808, 1134, 1197, 1342
RsaNI	GTAC	6 cut(s)	73, 599, 807, 1133, 1196, 1341
SaqAI	TTAA	3 cut(s)	855, 1068, 1230
SatI	GCNGC	5 cut(s)	20, 23, 935, 948, 1473
Sau3AI	GATC	3 cut(s)	472, 1262, 1522
Sau96I	GGNCC	7 cut(s)	424, 1112, 1330, 1354, 1378, 1429, 1530
ScaI	AGTACT	1 cut(s)	74
SchI	GAGTC	1 cut(s)	1279
ScrFI	CCNGG	1 cut(s)	11
SduI	GDGCHC	3 cut(s)	471, 1041, 1207
SfaNI	GCATC	5 cut(s)	235, 703, 707, 1174, 1392
SfoI	GGCGCC	1 cut(s)	1238
SgrAI	CRCCGGYG	2 cut(s)	760, 790
SinI	GGWCC	6 cut(s)	424, 1112, 1330, 1354, 1378, 1429
SmlI	CTYRAG	1 cut(s)	249
SmoI	CTYRAG	1 cut(s)	249
SsiI	CCGC	3 cut(s)	14, 937, 1473
SspDI	GGCGCC	1 cut(s)	1236
SspMI	CTAG	1 cut(s)	1208
StyD4I	CCNGG	1 cut(s)	9
StyI	CCWWGG	3 cut(s)	180, 427, 675
TaaI	ACNGT	5 cut(s)	172, 241, 491, 733, 979
TaiI	ACGT	3 cut(s)	531, 754, 1443
TaqI	TCGA	2 cut(s)	612, 1273
TatI	WGTACW	4 cut(s)	72, 806, 1132, 1195
TauI	GCSGC	1 cut(s)	1475
TfiI	GAWTC	6 cut(s)	254, 404, 629, 647, 683, 773
Tru1I	TTAA	3 cut(s)	855, 1068, 1230
Tru9I	TTAA	3 cut(s)	855, 1068, 1230
TscAI	CASTG	2 cut(s)	229, 1482
TseFI	GTSAC	1 cut(s)	640
TseI	GCWGC	4 cut(s)	19, 22, 934, 947
Tsp45I	GTSAC	1 cut(s)	640
TspDTI	ATGAA	6 cut(s)	179, 630, 878, 1110, 1340, 1364
TspGWI	ACGGA	1 cut(s)	437
TspRI	CASTG	2 cut(s)	229, 1482
Van91I	CCANNNNNTGG	1 cut(s)	85
VneI	GTGCAC	1 cut(s)	1203
VpaK11BI	GGWCC	6 cut(s)	424, 1112, 1330, 1354, 1378, 1429
VspI	ATTAAT	1 cut(s)	1230
XapI	RAATTY	7 cut(s)	323, 591, 1097, 1106, 1175, 1480, 1492
XceI	RCATGY	2 cut(s)	107, 902
XmnI	GAANNNNTTC	2 cut(s)	1097, 1294
XspI	CTAG	1 cut(s)	1208
ZraI	GACGTC	1 cut(s)	529
ZrmI	AGTACT	1 cut(s)	74

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.