Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0016576

Physical Location & Seq

Genomic Coordinates Forward (+)

17178053 .. 17180629

Gene Structure 2577 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g20460.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGAGTACTCCATATCCCATCTATTTGTTTCGACATTCTTTCTTTGTTTGCTTTCTCTTCGGGCAAACACTCTCCAAACTTACATAGTTCAGCTCCACCCACAAGGTGTAACCAGCTCTTCTTTCGCATCCAAAGCCGATTGGCATCTCTCATTTCTTGGACAAACCATTTCCTCCGAAAATGAAGACCCTTCTTCTCGCCTTCTTTACTCTTACCAATCTGCAATGGAAGGCTTTGCGGCTCAGCTGTCAGAGTCGGAGCTCGAGTCCTTGAAAATTCTGCCTGATGTGGTTGCAATTAGGCCTGACCGAATCCATCAAATTCACACCACTTACTCTTACAAGTTCTTGGGGCTCAACCCTGCTTCGAAACAAAGTGCTTGGCACAAGTCCTCATTTGGTCGAGGAACCATCATTGGGGTGCTTGATACTGGAGTTTGGCCTGAGAGTCCAAGCTTCAATGATCATGGAATGCCGCGGGTTCCCAAGAAATGGAGGGGGATTTGCCAACACGGCGTAGACTTCAATTCCTCAAACTGCAACAGGAAACTCATTGGTGCCAGGTTCTTCACCAGAGGCCATCGTGTGGCTTCCATGCCAAACTCACCTGATGGTGTTCAAGAGTACGCGTCTCCTCGTGATACTCACGGGCATGGTACTCACACATCATCAACAGCAGGGGGTGCTTCAGTCGGAATGGCAAGTGTCTTGGGCAATGCAGCCGGTGTGGCTCGAGGGATGGCTCCCGGAGCACATGTAGCGGTGTACAAAGTCTGCTGGCTCAATGGTTGTTATAGCTCTGATATCCTTGCTGCAATGGATGTTGCAATTATAGATGGAGTAGACATTCTCTCCCTCTCTCTAGGCGGCTTTCCCATTCCGCTTTTCGACGACAGCATTGCCATTGGAAGTTTCCGAGCAATGGAGCATGGAATTTCAGTTGTATGTGCAGCAGGAAACAATGGTCCAATTGAAAGCTCAGTCGCCAATGAAGCTCCTTGGATTGCCACAATCGGCGCGAGCACATTAGACCGGAGATTCCCAGCTATAGTTCAAATGGGTAATGGGAAAGTCCTTTATGGACAATCCCTGTACCCAGGAAACCGGCTGATGAGAAGAACCGAAAAAGAGAATGAAGTTGTTTATGTGACTGGTGAAAATACAGGAAGTGAATTTTGCTTCAAGGGGTCTCTACCAAGGGCAAAAGTACGAGGCAAGATAGTGGTTTGTGACCGTGGTGTTAACGGCAGGGCGGAGAAAGGTGAAGTGGTAAAGGAAGCTGGAGGGGCAGGAATGATTTTGGCCAATACAGAGATAAACCTGGAGGAGGACTCGGTTGATGTTCATGTCCTGCCAGCAACTCTGATTGGCTACAAAGAGTCCATTCACTTGAAGGCTTACATAAACTCTACTAGGAGACCAACGGCTAGGATTGTGTTTCAAGGCACAGTTCTAGGGAAGTCCAGAGCACCAGCAGTAGCTCAGTTCTCAGCTAGAGGACCCAGTTTTTCAAACCCTTCAATCCTAAAACCTGATGTGATTGCTCCAGGAGTCAACATCATTGCTGCTTGGCCTCAAAACATGGGCCCCACCGGCCTTCCTGAAGATACTAGGAGAGTGAATTTCACTATCATGTCAGGGACTTCAATGGCATGCCCTCATGCCAGTGGAATAGCTGCACTGGTGCACTCAGCTCATCCGAAATGGAGCCCTGCAGCTATCAAATCTGCCTTTATGACAACTGCTGATGTAACTGATCATTCAGGGAATCCGATAATGGATGGAGGCAAACCAGCAGGAGTTTTCGCAATTGGAGCTGGACAAGTAAACCCTGTGAGAGCTATTGATCCGGGGTTGATCTATGACATCAGGCCGGAGGAGTATGTCACTCATTTGTGCACTCTTGGATACAAGAAATCGGATATCTTAACAATCACTCACAGGAATGTTAGCTGCCTGGAAATTTTGAAGAAGAATAGGGGTTTCAGCCTCAATTACCCCTCCATTTCAATGACTTTCAAACATGGCATGAGAAGTAAAATGGTCAGACGACGAGTAACAAACGTGGGGAGTCCTCATTCCACTTACTTGCTGGAAGTAATGGCACCTAAGGGAGTTAGAGTGAAAGTTAAGCCTCAAAGGTTGGTTTTCACAGGCATCAACCAGAGCTTGAGTTATAGGGTATGGTTTATATCAAGGAAGAGAATCGGAAAAGATAAGATGAGCTTTGCACAAGGACAATTGGCATGGGTGAGTTCTAACAATAGTAGCTTTCACAAGGTCAAAAGTCCCATTTCTGTGACTTGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009653 GO:0009791 GO:0009888 GO:0009897 GO:0009986 GO:0010016 GO:0010103 GO:0010374 GO:0016020 GO:0016787 GO:0017171 GO:0019538 GO:0032501 GO:0032502 GO:0042127 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0048367 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0065007 GO:0070011 GO:0071704 GO:0071944 GO:0090558 GO:0090626 GO:0090698 GO:0098552 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

771

Amino Acids

83.38

Weight (kDa)

9.52

Isoelectric Point (pI)

37.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	27 - 109	2.4e-17	Peptidase inhibitor I9
Peptidase_S8	PF00082	134 - 586	7.2e-48	Subtilase family
PA	PF02225	379 - 460	3.6e-13	PA domain
fn3_6	PF17766	664 - 767	9.9e-25	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04110
fragaria_vesca	FvH4_2g20460
malus_domestica	MD05G1188400.v1.1 MD10G1175900.v1.1
prunus_persica	Prupe.8G214900_v2.0.a1
pyrus_communis	pycom10g15150
rosa_chinensis	RchiOBHm_Chr6g0286551
rosa_laevigata	RLG00000012558
rosa_multiflora	Rmu_sc0004628.1_g000013
rosa_roxburghii	Rroxscaffold_7G00182190
rosa_rugosa	Rorug06G0181100
rosa_samantha	Rh6AG293900 Rh6BG297000
rosa_wichuraiana	Rw6G025300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	557, 2104
AccB7I	CCANNNNNTGG	2 cut(s)	492, 586
AccI	GTMKAC	2 cut(s)	519, 843
AccII	CGCG	3 cut(s)	478, 629, 1019
AciI	CCGC	7 cut(s)	239, 476, 478, 761, 867, 881, 1253
AclWI	GGATC	1 cut(s)	1841
AcoI	YGGCCR	1 cut(s)	1302
AcsI	RAATTY	6 cut(s)	276, 321, 933, 1172, 1621, 1962
AcuI	CTGAAG	2 cut(s)	672, 1623
AdeI	CACNNNGTG	1 cut(s)	107
AfaI	GTAC	6 cut(s)	8, 626, 658, 767, 1094, 1209
AfiI	CCNNNNNNNGG	5 cut(s)	417, 492, 586, 922, 1327
AflIII	ACRYGT	2 cut(s)	627, 754
AjnI	CCWGG	5 cut(s)	560, 1096, 1320, 1546, 1956
Alw21I	GWGCWC	6 cut(s)	264, 754, 1025, 1471, 1689, 1901
Alw26I	GTCTC	3 cut(s)	636, 1194, 1411
Alw44I	GTGCAC	2 cut(s)	1685, 1897
AlwI	GGATC	1 cut(s)	1841
Ama87I	CYCGRG	2 cut(s)	263, 732
AoxI	GGCC	8 cut(s)	302, 440, 577, 1302, 1571, 1585, 1594, 1871
ApaI	GGGCCC	1 cut(s)	1589
ApaLI	GTGCAC	2 cut(s)	1685, 1897
ApeKI	GCWGC	7 cut(s)	719, 812, 950, 1565, 1676, 1715, 1953
ApoI	RAATTY	6 cut(s)	276, 321, 933, 1172, 1621, 1962
AspLEI	GCGC	1 cut(s)	1019
AspS9I	GGNCC	4 cut(s)	965, 1499, 1585, 1586
AsuC2I	CCSGG	2 cut(s)	747, 1851
AsuHPI	GGTGA	5 cut(s)	562, 597, 1166, 1274, 2263
AsuII	TTCGAA	1 cut(s)	368
AvaI	CYCGRG	2 cut(s)	263, 732
AvaII	GGWCC	2 cut(s)	965, 1499
AxyI	CCTNAGG	1 cut(s)	2109
BaeGI	GKGCMC	3 cut(s)	1589, 1689, 1901
BaeI	ACNNNNGTAYC	2 cut(s)	420, 453
BalI	TGGCCA	1 cut(s)	1304
BanI	GGYRCC	2 cut(s)	557, 2104
BanII	GRGCYC	4 cut(s)	264, 357, 1589, 1712
BauI	CACGAG	1 cut(s)	636
BbsI	GAAGAC	1 cut(s)	192
Bbv12I	GWGCWC	6 cut(s)	264, 754, 1025, 1471, 1689, 1901
BbvI	GCAGC	7 cut(s)	731, 799, 962, 1552, 1663, 1727, 1940
BccI	CCATC	8 cut(s)	27, 324, 419, 588, 605, 733, 830, 1775
BceAI	ACGGC	3 cut(s)	529, 1261, 1440
BcgI	CGANNNNNNTGC	2 cut(s)	881, 915
BciT130I	CCWGG	5 cut(s)	562, 1098, 1322, 1548, 1958
BciVI	GTATCC	1 cut(s)	1901
BclI	TGATCA	2 cut(s)	463, 1756
BcnI	CCSGG	2 cut(s)	747, 1851
BcoDI	GTCTC	3 cut(s)	636, 1194, 1411
BfaI	CTAG	6 cut(s)	863, 1413, 1428, 1454, 1494, 1611
BfmI	CTRYAG	2 cut(s)	1047, 1713
BfuI	GTATCC	1 cut(s)	1901
BglI	GCCNNNNNGGC	3 cut(s)	513, 728, 1593
BlpI	GCTNAGC	1 cut(s)	243
BmcAI	AGTACT	1 cut(s)	8
Bme1390I	CCNGG	7 cut(s)	562, 747, 1098, 1322, 1548, 1851, 1958
Bme18I	GGWCC	2 cut(s)	965, 1499
BmeT110I	CYCGRG	2 cut(s)	263, 732
BmgT120I	GGNCC	4 cut(s)	965, 1499, 1585, 1586
BmiI	GGNNCC	9 cut(s)	409, 483, 559, 744, 1501, 1587, 1588, 1709, 2106
BmrFI	CCNGG	7 cut(s)	562, 747, 1098, 1322, 1548, 1851, 1958
BmrI	ACTGGG	1 cut(s)	1497
BmsI	GCATC	3 cut(s)	137, 154, 2166
BmuI	ACTGGG	1 cut(s)	1497
BpiI	GAAGAC	1 cut(s)	192
BplI	GAGNNNNNCTC	2 cut(s)	1316, 1348
BpmI	CTGGAG	4 cut(s)	453, 1302, 1343, 1530
Bpu1102I	GCTNAGC	1 cut(s)	243
Bpu14I	TTCGAA	1 cut(s)	368
BpuEI	CTTGAG	1 cut(s)	2191
BpuMI	CCSGG	2 cut(s)	747, 1851
BsaBI	GATNNNNATC	1 cut(s)	144
BsaI	GGTCTC	2 cut(s)	1194, 1411
BsaJI	CCNNGG	6 cut(s)	476, 998, 1096, 1196, 1234, 1850
BsaWI	WCCGGW	1 cut(s)	1032
BsaXI	ACNNNNNCTCC	8 cut(s)	251, 281, 741, 771, 836, 866, 2106, 2136
Bsc4I	CCNNNNNNNGG	5 cut(s)	417, 492, 586, 922, 1327
Bse118I	RCCGGY	3 cut(s)	722, 1104, 1592
Bse1I	ACTGG	5 cut(s)	436, 1156, 1503, 1665, 1686
Bse21I	CCTNAGG	1 cut(s)	2109
Bse3DI	GCAATG	6 cut(s)	231, 721, 822, 897, 927, 1560
Bse8I	GATNNNNATC	1 cut(s)	144
BseBI	CCWGG	5 cut(s)	562, 1098, 1322, 1548, 1958
BseDI	CCNNGG	6 cut(s)	476, 998, 1096, 1196, 1234, 1850
BseGI	GGATG	5 cut(s)	128, 744, 826, 1696, 1786
BseJI	GATNNNNATC	1 cut(s)	144
BseLI	CCNNNNNNNGG	5 cut(s)	417, 492, 586, 922, 1327
BseMI	GCAATG	6 cut(s)	231, 721, 822, 897, 927, 1560
BseMII	CTCAG	6 cut(s)	257, 435, 993, 1496, 1503, 1704
BseNI	ACTGG	5 cut(s)	436, 1156, 1503, 1665, 1686
BseRI	GAGGAG	3 cut(s)	624, 1340, 1892
BseSI	GKGCMC	3 cut(s)	1589, 1689, 1901
BseXI	GCAGC	7 cut(s)	731, 799, 962, 1552, 1663, 1727, 1940
BseYI	CCCAGC	1 cut(s)	1042
BsgI	GTGCAG	2 cut(s)	969, 1662
Bsh1236I	CGCG	3 cut(s)	478, 629, 1019
BshFI	GGCC	8 cut(s)	304, 442, 579, 1304, 1573, 1587, 1596, 1873
BshNI	GGYRCC	2 cut(s)	557, 2104
BsiHKAI	GWGCWC	6 cut(s)	264, 754, 1025, 1471, 1689, 1901
BsiHKCI	CYCGRG	2 cut(s)	263, 732
BsiSI	CCGG	7 cut(s)	723, 747, 1033, 1105, 1593, 1850, 1874
BslFI	GGGAC	2 cut(s)	1654, 2274
BslI	CCNNNNNNNGG	5 cut(s)	417, 492, 586, 922, 1327
BsmAI	GTCTC	3 cut(s)	636, 1194, 1411
BsmBI	CGTCTC	1 cut(s)	636
BsmFI	GGGAC	2 cut(s)	1654, 2274
BsmI	GAATGC	1 cut(s)	477
BsnI	GGCC	8 cut(s)	304, 442, 579, 1304, 1573, 1587, 1596, 1873
Bso31I	GGTCTC	2 cut(s)	1194, 1411
BsoBI	CYCGRG	2 cut(s)	263, 732
Bsp119I	TTCGAA	1 cut(s)	368
Bsp120I	GGGCCC	1 cut(s)	1585
Bsp1286I	GDGCHC	9 cut(s)	264, 357, 754, 1025, 1471, 1589, 1689, 1712, 1901
Bsp1407I	TGTACA	1 cut(s)	765
Bsp143I	GATC	4 cut(s)	463, 1756, 1846, 1857
Bsp1720I	GCTNAGC	1 cut(s)	243
BspACI	CCGC	7 cut(s)	239, 476, 478, 761, 867, 881, 1253
BspANI	GGCC	8 cut(s)	304, 442, 579, 1304, 1573, 1587, 1596, 1873
BspCNI	CTCAG	6 cut(s)	256, 436, 992, 1495, 1502, 1703
BspFNI	CGCG	3 cut(s)	478, 629, 1019
BspLI	GGNNCC	9 cut(s)	409, 483, 559, 744, 1501, 1587, 1588, 1709, 2106
BspMAI	CTGCAG	1 cut(s)	1717
BspPI	GGATC	1 cut(s)	1841
BspQI	GCTCTTC	1 cut(s)	124
BspT104I	TTCGAA	1 cut(s)	368
BspT107I	GGYRCC	2 cut(s)	557, 2104
BspTNI	GGTCTC	2 cut(s)	1194, 1411
BsrDI	GCAATG	6 cut(s)	231, 721, 822, 897, 927, 1560
BsrFI	RCCGGY	3 cut(s)	722, 1104, 1592
BsrGI	TGTACA	1 cut(s)	765
BsrI	ACTGG	5 cut(s)	436, 1156, 1503, 1665, 1686
BssAI	RCCGGY	3 cut(s)	722, 1104, 1592
BssECI	CCNNGG	6 cut(s)	476, 998, 1096, 1196, 1234, 1850
BssMI	GATC	4 cut(s)	463, 1756, 1846, 1857
BssSI	CACGAG	1 cut(s)	636
BssT1I	CCWWGG	2 cut(s)	998, 1196
Bst2BI	CACGAG	1 cut(s)	636
Bst2UI	CCWGG	5 cut(s)	562, 1098, 1322, 1548, 1958
Bst4CI	ACNGT	2 cut(s)	1235, 1450
Bst6I	CTCTTC	3 cut(s)	63, 124, 2195
BstAPI	GCANNNNNTGC	1 cut(s)	683
BstAUI	TGTACA	1 cut(s)	765
BstBI	TTCGAA	1 cut(s)	368
BstC8I	GCNNGC	4 cut(s)	779, 1021, 1356, 1654
BstDEI	CTNAG	7 cut(s)	243, 444, 979, 1482, 1489, 1690, 2109
BstDSI	CCRYGG	2 cut(s)	476, 1234
BstENI	CCTNNNNNAGG	1 cut(s)	1325
BstF5I	GGATG	5 cut(s)	128, 744, 826, 1696, 1786
BstFNI	CGCG	3 cut(s)	478, 629, 1019
BstHHI	GCGC	1 cut(s)	1019
BstKTI	GATC	4 cut(s)	466, 1759, 1849, 1860
BstMAI	GTCTC	3 cut(s)	636, 1194, 1411
BstMBI	GATC	4 cut(s)	463, 1756, 1846, 1857
BstNI	CCWGG	5 cut(s)	562, 1098, 1322, 1548, 1958
BstNSI	RCATGY	2 cut(s)	758, 1656
BstSCI	CCNGG	7 cut(s)	560, 745, 1096, 1320, 1546, 1849, 1956
BstSFI	CTRYAG	2 cut(s)	1047, 1713
BstSLI	GKGCMC	3 cut(s)	1589, 1689, 1901
BstUI	CGCG	3 cut(s)	478, 629, 1019
BstV1I	GCAGC	7 cut(s)	731, 799, 962, 1552, 1663, 1727, 1940
BstV2I	GAAGAC	1 cut(s)	192
Bsu36I	CCTNAGG	1 cut(s)	2109
BsuI	GTATCC	1 cut(s)	1901
BsuRI	GGCC	8 cut(s)	304, 442, 579, 1304, 1573, 1587, 1596, 1873
BtgI	CCRYGG	2 cut(s)	476, 1234
BtsCI	GGATG	5 cut(s)	128, 744, 826, 1696, 1786
BtsIMutI	CAGTG	2 cut(s)	1672, 1679
Cac8I	GCNNGC	4 cut(s)	779, 1021, 1356, 1654
CfoI	GCGC	1 cut(s)	1019
Cfr10I	RCCGGY	3 cut(s)	722, 1104, 1592
Cfr13I	GGNCC	4 cut(s)	965, 1499, 1585, 1586
Cfr42I	CCGCGG	1 cut(s)	479
CseI	GACGC	1 cut(s)	618
Csp6I	GTAC	6 cut(s)	7, 625, 657, 766, 1093, 1208
CviQI	GTAC	6 cut(s)	7, 625, 657, 766, 1093, 1208
DdeI	CTNAG	7 cut(s)	243, 444, 979, 1482, 1489, 1690, 2109
DpnI	GATC	4 cut(s)	465, 1758, 1848, 1859
DpnII	GATC	4 cut(s)	463, 1756, 1846, 1857
DraIII	CACNNNGTG	1 cut(s)	107
EaeI	YGGCCR	1 cut(s)	1302
Eam1104I	CTCTTC	3 cut(s)	63, 124, 2195
EarI	CTCTTC	3 cut(s)	63, 124, 2195
EciI	GGCGGA	1 cut(s)	1268
Ecl136II	GAGCTC	1 cut(s)	262
Eco130I	CCWWGG	2 cut(s)	998, 1196
Eco147I	AGGCCT	1 cut(s)	304
Eco24I	GRGCYC	4 cut(s)	264, 357, 1589, 1712
Eco31I	GGTCTC	2 cut(s)	1194, 1411
Eco32I	GATATC	2 cut(s)	805, 1924
Eco47I	GGWCC	2 cut(s)	965, 1499
Eco53kI	GAGCTC	1 cut(s)	262
Eco57I	CTGAAG	2 cut(s)	672, 1623
Eco81I	CCTNAGG	1 cut(s)	2109
Eco88I	CYCGRG	2 cut(s)	263, 732
EcoICRI	GAGCTC	1 cut(s)	262
EcoNI	CCTNNNNNAGG	1 cut(s)	1325
EcoO109I	RGGNCCY	2 cut(s)	1499, 1586
EcoRII	CCWGG	5 cut(s)	560, 1096, 1320, 1546, 1956
EcoRV	GATATC	2 cut(s)	805, 1924
EcoT14I	CCWWGG	2 cut(s)	998, 1196
EcoT38I	GRGCYC	4 cut(s)	264, 357, 1589, 1712
ErhI	CCWWGG	2 cut(s)	998, 1196
Esp3I	CGTCTC	1 cut(s)	636
FalI	AAGNNNNNCTT	2 cut(s)	2210, 2242
FaqI	GGGAC	2 cut(s)	1654, 2274
FauI	CCCGC	1 cut(s)	471
FbaI	TGATCA	2 cut(s)	463, 1756
FblI	GTMKAC	2 cut(s)	519, 843
FokI	GGATG	5 cut(s)	115, 751, 833, 1683, 1793
FriOI	GRGCYC	4 cut(s)	264, 357, 1589, 1712
FspBI	CTAG	6 cut(s)	863, 1413, 1428, 1454, 1494, 1611
GlaI	GCGC	1 cut(s)	1018
GsaI	CCCAGC	1 cut(s)	1046
GsuI	CTGGAG	4 cut(s)	453, 1302, 1343, 1530
HaeIII	GGCC	8 cut(s)	304, 442, 579, 1304, 1573, 1587, 1596, 1873
HapII	CCGG	7 cut(s)	723, 747, 1033, 1105, 1593, 1850, 1874
HgaI	GACGC	1 cut(s)	618
HhaI	GCGC	1 cut(s)	1019
Hin6I	GCGC	1 cut(s)	1017
HinP1I	GCGC	1 cut(s)	1017
HincII	GTYRAC	2 cut(s)	1243, 1555
HindII	GTYRAC	2 cut(s)	1243, 1555
HindIII	AAGCTT	1 cut(s)	454
HpaI	GTTAAC	1 cut(s)	1243
HpaII	CCGG	7 cut(s)	723, 747, 1033, 1105, 1593, 1850, 1874
HphI	GGTGA	5 cut(s)	562, 597, 1166, 1274, 2263
Hpy166II	GTNNAC	8 cut(s)	520, 766, 844, 1243, 1555, 1687, 1828, 1899
Hpy188III	TCNNGA	4 cut(s)	620, 638, 1464, 1601
Hpy8I	GTNNAC	8 cut(s)	520, 766, 844, 1243, 1555, 1687, 1828, 1899
Hpy99I	CGWCG	2 cut(s)	893, 2055
HpyAV	CCTTC	6 cut(s)	201, 212, 224, 1387, 1527, 1607
HpyCH4III	ACNGT	2 cut(s)	1235, 1450
HpyCH4IV	ACGT	1 cut(s)	2064
HpyF3I	CTNAG	7 cut(s)	243, 444, 979, 1482, 1489, 1690, 2109
HpySE526I	ACGT	1 cut(s)	2064
HspAI	GCGC	1 cut(s)	1017
Ksp22I	TGATCA	2 cut(s)	463, 1756
KspAI	GTTAAC	1 cut(s)	1243
KspI	CCGCGG	1 cut(s)	479
Kzo9I	GATC	4 cut(s)	463, 1756, 1846, 1857
LguI	GCTCTTC	1 cut(s)	124
LmnI	GCTCC	9 cut(s)	99, 259, 748, 749, 925, 1000, 1549, 1707, 1814
Lsp1109I	GCAGC	7 cut(s)	731, 799, 962, 1552, 1663, 1727, 1940
LweI	GCATC	3 cut(s)	137, 154, 2166
MaeI	CTAG	6 cut(s)	863, 1413, 1428, 1454, 1494, 1611
MaeII	ACGT	1 cut(s)	2064
MaeIII	GTNAC	7 cut(s)	109, 1147, 1229, 1750, 1885, 2056, 2299
MalI	GATC	4 cut(s)	465, 1758, 1848, 1859
MboI	GATC	4 cut(s)	463, 1756, 1846, 1857
MfeI	CAATTG	3 cut(s)	969, 1809, 2240
MhlI	GDGCHC	9 cut(s)	264, 357, 754, 1025, 1471, 1589, 1689, 1712, 1901
MlsI	TGGCCA	1 cut(s)	1304
MluI	ACGCGT	1 cut(s)	627
MluNI	TGGCCA	1 cut(s)	1304
MlyI	GAGTC	7 cut(s)	263, 275, 457, 1325, 1388, 1560, 2080
MmeI	TCCRAC	2 cut(s)	237, 673
Mox20I	TGGCCA	1 cut(s)	1304
MscI	TGGCCA	1 cut(s)	1304
MseI	TTAA	3 cut(s)	1242, 1928, 2130
MslI	CAYNNNNRTG	7 cut(s)	419, 651, 1631, 1665, 1944, 2009, 2297
Msp20I	TGGCCA	1 cut(s)	1304
MspA1I	CMGCKG	2 cut(s)	247, 478
MspI	CCGG	7 cut(s)	723, 747, 1033, 1105, 1593, 1850, 1874
MspR9I	CCNGG	7 cut(s)	562, 747, 1098, 1322, 1548, 1851, 1958
MunI	CAATTG	3 cut(s)	969, 1809, 2240
Mva1269I	GAATGC	1 cut(s)	477
MvaI	CCWGG	5 cut(s)	562, 1098, 1322, 1548, 1958
MvnI	CGCG	3 cut(s)	478, 629, 1019
NciI	CCSGG	2 cut(s)	747, 1851
NdeII	GATC	4 cut(s)	463, 1756, 1846, 1857
NlaIV	GGNNCC	9 cut(s)	409, 483, 559, 744, 1501, 1587, 1588, 1709, 2106
NmuCI	GTSAC	4 cut(s)	1147, 1229, 1885, 2299
NspI	RCATGY	2 cut(s)	758, 1656
NspV	TTCGAA	1 cut(s)	368
PaeI	GCATGC	1 cut(s)	1656
PaeR7I	CTCGAG	2 cut(s)	263, 732
PceI	AGGCCT	1 cut(s)	304
PciI	ACATGT	1 cut(s)	754
PciSI	GCTCTTC	1 cut(s)	124
PctI	GAATGC	1 cut(s)	477
PfeI	GAWTC	4 cut(s)	312, 1038, 1768, 2205
PflMI	CCANNNNNTGG	2 cut(s)	492, 586
PfoI	TCCNGGA	2 cut(s)	745, 1546
PleI	GAGTC	7 cut(s)	262, 274, 456, 1325, 1387, 1559, 2079
PpsI	GAGTC	7 cut(s)	262, 274, 456, 1325, 1387, 1559, 2079
PpuMI	RGGWCCY	1 cut(s)	1499
PscI	ACATGT	1 cut(s)	754
Psp124BI	GAGCTC	1 cut(s)	264
Psp5II	RGGWCCY	1 cut(s)	1499
Psp6I	CCWGG	5 cut(s)	560, 1096, 1320, 1546, 1956
PspFI	CCCAGC	1 cut(s)	1042
PspGI	CCWGG	5 cut(s)	560, 1096, 1320, 1546, 1956
PspN4I	GGNNCC	9 cut(s)	409, 483, 559, 744, 1501, 1587, 1588, 1709, 2106
PspOMI	GGGCCC	1 cut(s)	1585
PspPI	GGNCC	4 cut(s)	965, 1499, 1585, 1586
PspPPI	RGGWCCY	1 cut(s)	1499
PspXI	VCTCGAGB	2 cut(s)	263, 732
PstI	CTGCAG	1 cut(s)	1717
PvuII	CAGCTG	1 cut(s)	247
RsaI	GTAC	6 cut(s)	8, 626, 658, 767, 1094, 1209
RsaNI	GTAC	6 cut(s)	7, 625, 657, 766, 1093, 1208
RseI	CAYNNNNRTG	7 cut(s)	419, 651, 1631, 1665, 1944, 2009, 2297
SacI	GAGCTC	1 cut(s)	264
SacII	CCGCGG	1 cut(s)	479
SapI	GCTCTTC	1 cut(s)	124
SaqAI	TTAA	3 cut(s)	1242, 1928, 2130
Sau3AI	GATC	4 cut(s)	463, 1756, 1846, 1857
Sau96I	GGNCC	4 cut(s)	965, 1499, 1585, 1586
ScaI	AGTACT	1 cut(s)	8
SchI	GAGTC	7 cut(s)	263, 275, 457, 1325, 1388, 1560, 2080
ScrFI	CCNGG	7 cut(s)	562, 747, 1098, 1322, 1548, 1851, 1958
SduI	GDGCHC	9 cut(s)	264, 357, 754, 1025, 1471, 1589, 1689, 1712, 1901
SfaNI	GCATC	3 cut(s)	137, 154, 2166
SfcI	CTRYAG	2 cut(s)	1047, 1713
SfiI	GGCCNNNNNGGCC	1 cut(s)	1593
Sfr274I	CTCGAG	2 cut(s)	263, 732
Sfr303I	CCGCGG	1 cut(s)	479
SfuI	TTCGAA	1 cut(s)	368
SgrBI	CCGCGG	1 cut(s)	479
SinI	GGWCC	2 cut(s)	965, 1499
SlaI	CTCGAG	2 cut(s)	263, 732
SmiMI	CAYNNNNRTG	7 cut(s)	419, 651, 1631, 1665, 1944, 2009, 2297
SmlI	CTYRAG	3 cut(s)	263, 732, 2170
SmoI	CTYRAG	3 cut(s)	263, 732, 2170
SphI	GCATGC	1 cut(s)	1656
SseBI	AGGCCT	1 cut(s)	304
SsiI	CCGC	7 cut(s)	239, 476, 478, 761, 867, 881, 1253
SspMI	CTAG	6 cut(s)	863, 1413, 1428, 1454, 1494, 1611
SstI	GAGCTC	1 cut(s)	264
StuI	AGGCCT	1 cut(s)	304
StyD4I	CCNGG	7 cut(s)	560, 745, 1096, 1320, 1546, 1849, 1956
StyI	CCWWGG	2 cut(s)	998, 1196
TaaI	ACNGT	2 cut(s)	1235, 1450
TaiI	ACGT	1 cut(s)	2067
TaqI	TCGA	6 cut(s)	32, 264, 368, 403, 733, 888
TaqII	GACCGA	1 cut(s)	324
TatI	WGTACW	2 cut(s)	6, 765
TauI	GCSGC	3 cut(s)	242, 478, 870
TfiI	GAWTC	4 cut(s)	312, 1038, 1768, 2205
Tru1I	TTAA	3 cut(s)	1242, 1928, 2130
Tru9I	TTAA	3 cut(s)	1242, 1928, 2130
TscAI	CASTG	2 cut(s)	1672, 1686
TseFI	GTSAC	4 cut(s)	1147, 1229, 1885, 2299
TseI	GCWGC	7 cut(s)	719, 812, 950, 1565, 1676, 1715, 1953
Tsp45I	GTSAC	4 cut(s)	1147, 1229, 1885, 2299
TspDTI	ATGAA	4 cut(s)	198, 1005, 1149, 1334
TspRI	CASTG	2 cut(s)	1672, 1686
Van91I	CCANNNNNTGG	2 cut(s)	492, 586
VneI	GTGCAC	2 cut(s)	1685, 1897
VpaK11BI	GGWCC	2 cut(s)	965, 1499
XagI	CCTNNNNNAGG	1 cut(s)	1325
XapI	RAATTY	6 cut(s)	276, 321, 933, 1172, 1621, 1962
XceI	RCATGY	2 cut(s)	758, 1656
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2089
XhoI	CTCGAG	2 cut(s)	263, 732
XmiI	GTMKAC	2 cut(s)	519, 843
XspI	CTAG	6 cut(s)	863, 1413, 1428, 1454, 1494, 1611
ZrmI	AGTACT	1 cut(s)	8

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.