Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0016576

Physical Location & Seq

Genomic Coordinates Forward (+)

48620138 .. 48622450

Gene Structure 2313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G025300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGAGTATACCAAATCACATTTCTTTGTTTCAACACTCTTTCTTTGCTTGCTTTCTCTTCGGGCAAACACTCTCCAAACTTACATAGTTCAGCTCCACCCACAAGGTGTAACATGCTCTTCTTTCGCATCCAAAGCCGATTGGCATCTCTCTTTTCTCGAACAAACCATGTCCTCTGTTGACGAAGATCCTTCTTCTCGCCTTCTTTACTCTTACCATTCCGCCATGGAAGGCTTTGCGGCTCAGCTGTCAGAGTCAGAGCTCGAGTCCTTGAAAATGCTGCCTGATGTGGTTGCAATTAGGCCTGACCGAATTCACCAAATTCACACCACTTACTCTTACAAGTTCTTGGGGCTCGACCCTGCTTCCAAAGAAGGCGCTTGGCACAAGTCCTCATTCGGTCGAGGAACCATCATTGGGGTGCTTGATACTGGAGTTTGGCCCGAGAGTCCAAGCTTCAATGATTATGGAATGCCGCGGGTTCCCAAAAAATGGAGGGGGATTTGCCAACAAGGGGTAGACTTCAATTCCTCAAATTGCAACAGAAAACTCATTGGTGCCAGGTTCTTCACCAGAGGCCATCGTGTGGCTTCCATGCCAAACTCGCCTGACGGTATTCAAGATTACGCATCTCCCCGTGATACCCAAGGGCATGGTACTCACACATCATCAACAGCTGGGGGTGCTTCAGTCGGAATGGCAAGTGTTTTGGGCAATGCAGTTGGTGTGGCTCGAGGGATGGCTCCCGGAGCACATGTAGCGGTGTACAAAGTCTGCTGGCTCAATGGATGTTATAGCTCTGATATCCTTGCTGCAATGGATGTTGCAATTATAGATGGAGTAGACGTTCTCTCCCTCTCTCTAGGTGGCTTCCCCATTCCACTTTTTGATGACACCATTGCCATTGGAAGTTTTCGAGCAATGGAGCATGGAATTTCAGTTGTATGTGCAGCAGGAAACAATGGTCCAATTGAAAGCTCAGTTGCCAATGAGGCTCCTTGGATTGCCACCATCGGCGCGAGCACATTAGACCGGAGATTCCCAGCCATAGTTCAAATGGGTGATGGAAAAGTCCTTTATGGAGAATCCATGTACCCAGGAAACCATTTGAAGAGAAGTACTGGAAAAGAGGTTGAAGTTGTTTATGTGACTGATGAAAATACAGGAAGTGAATTTTGCTTCAGGGGGTCTCTCCCAAGAGCAAAAGTACGCGGCAAGATAGTGGTCTGTGACCGTGGTGTCAATGGTAGGGCGGAGAAAGGTGAAGTGGTAAAAGAAGCTGGAGGAGCTGGAATGATTTTGGCCAATACAGAGGTAAACCTGGAGGAGGACTCTGTTGATGTCCATGTCTTGCCTGCGACTCTGATTGGCTACAAAGAGTCCATTCACTTGAAGGCTTACATAAACTCTACTAGGAGACCAATGGCTAGAATTGTGTTTGAAGGCACAGTTATAGGGAAGTCCAGAGCACCAGCAGTAGCTCAGTTCTCAGCTAGAGGACCCAGTTTTTCGAACCCTTCAATCCTCAAACCTGATGTGATTGCTCCGGGAGTCAACATCATTGCTGCTTGGCCTCAAAACATGGGTCCCACCGGCCTTCGAGAAGATTCTAGGAGAGTGAATTTCACTGTCATGTCAGGGACTTCAATGGCATGTCCTCATGCTAGTGGCATTGCTGCACTTGTACGCACAGCTCATCCGAAATGGAGCCCCGCAGCTATCAAATCTGCTATTATGACAACTGCTGATGTAACTGATCATTCAGGGAATCCGATAATGGACGGAGGCAAACCAGCCGGAGTTTTTGCAATTGGTGCTGGACATGTAAACCCTGTGAGAGCTGTTGATCCGGGGTTGATCTACGACATCAGGCCGGAGGAGTATGTCACTCATTTGTGCACTCTTGGATACAAGAAATCGGATATCTTAACAATCACTCACAGGAATGTTAGCTGCCTTGAAATTTTGAAGATGAATAGGGGTTTCAGCCTCAATTACCCCTCCATTTCAGTAACTTTCAAACACGGCATGAGAAGTAAAATGATCAGAAGACGAGTAACAAACGTAGGGAATCCGCATTCCACTTACTTGCTGGAAGTAATGGCACCTAAGGAAGTTAGAGTGAAAGTTAAGCCTCAGAGGTTAGTTTTCACAGGCATCAACCAGAGTTTGAGTTATAGGGTATGGTTTATATCGAGGAAGAGAATCAGAAAAGATAACATGAGTTTTGCACAAGGACATTTAGCATGGGTGAATTCTAACAATAGTAGCTTTCACAAGGTCAAAAGTCCCATCTCTGTGACTTGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009653 GO:0009791 GO:0009888 GO:0009897 GO:0009986 GO:0010016 GO:0010103 GO:0010374 GO:0016020 GO:0016787 GO:0017171 GO:0019538 GO:0032501 GO:0032502 GO:0042127 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0048367 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0065007 GO:0070011 GO:0071704 GO:0071944 GO:0090558 GO:0090626 GO:0090698 GO:0098552 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

770

Amino Acids

83.69

Weight (kDa)

9.27

Isoelectric Point (pI)

35.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	27 - 109	2.6e-17	Peptidase inhibitor I9
Peptidase_S8	PF00082	134 - 586	7.5e-48	Subtilase family
PA	PF02225	379 - 460	3e-13	PA domain
fn3_6	PF17766	664 - 767	4e-24	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04110
fragaria_vesca	FvH4_2g20460
malus_domestica	MD05G1188400.v1.1 MD10G1175900.v1.1
prunus_persica	Prupe.8G214900_v2.0.a1
pyrus_communis	pycom10g15150
rosa_chinensis	RchiOBHm_Chr6g0286551
rosa_laevigata	RLG00000012558
rosa_multiflora	Rmu_sc0004628.1_g000013
rosa_roxburghii	Rroxscaffold_7G00182190
rosa_rugosa	Rorug06G0181100
rosa_samantha	Rh6AG293900 Rh6BG297000
rosa_wichuraiana	Rw6G025300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1238
AccB1I	GGYRCC	2 cut(s)	557, 2104
AccB7I	CCANNNNNTGG	2 cut(s)	492, 586
AccI	GTMKAC	3 cut(s)	8, 519, 843
AccII	CGCG	3 cut(s)	478, 1019, 1212
AciI	CCGC	9 cut(s)	222, 239, 476, 478, 761, 1212, 1253, 1713, 2075
AclWI	GGATC	2 cut(s)	182, 1841
AcoI	YGGCCR	1 cut(s)	1302
AcsI	RAATTY	7 cut(s)	312, 321, 933, 1172, 1621, 1962, 2254
AcuI	CTGAAG	2 cut(s)	672, 1165
AdeI	CACNNNGTG	1 cut(s)	107
AfaI	GTAC	6 cut(s)	658, 767, 1094, 1120, 1209, 1686
AfiI	CCNNNNNNNGG	5 cut(s)	417, 492, 514, 586, 1327
AflIII	ACRYGT	2 cut(s)	754, 1822
AjnI	CCWGG	3 cut(s)	560, 1096, 1320
AjuI	GAANNNNNNNTTGG	1 cut(s)	37
AloI	GAACNNNNNNTCC	2 cut(s)	831, 863
Alw21I	GWGCWC	5 cut(s)	264, 754, 1025, 1471, 1901
Alw26I	GTCTC	2 cut(s)	1194, 1411
Alw44I	GTGCAC	1 cut(s)	1897
AlwI	GGATC	2 cut(s)	182, 1841
Ama87I	CYCGRG	3 cut(s)	263, 443, 732
AoxI	GGCC	7 cut(s)	302, 440, 577, 1302, 1571, 1594, 1871
ApaLI	GTGCAC	1 cut(s)	1897
ApeKI	GCWGC	7 cut(s)	280, 812, 950, 1565, 1676, 1715, 1953
ApoI	RAATTY	7 cut(s)	312, 321, 933, 1172, 1621, 1962, 2254
ArsI	GACNNNNNNTTYG	2 cut(s)	1570, 1602
AspLEI	GCGC	2 cut(s)	380, 1019
AspS9I	GGNCC	4 cut(s)	441, 965, 1499, 1586
AsuC2I	CCSGG	3 cut(s)	747, 1548, 1851
AsuHPI	GGTGA	5 cut(s)	308, 562, 1073, 1274, 2263
AsuII	TTCGAA	1 cut(s)	1511
AvaI	CYCGRG	3 cut(s)	263, 443, 732
AvaII	GGWCC	3 cut(s)	965, 1499, 1586
AxyI	CCTNAGG	1 cut(s)	2109
BaeGI	GKGCMC	1 cut(s)	1901
BaeI	ACNNNNGTAYC	2 cut(s)	420, 453
BalI	TGGCCA	1 cut(s)	1304
BanI	GGYRCC	2 cut(s)	557, 2104
BanII	GRGCYC	3 cut(s)	264, 357, 1712
BbsI	GAAGAC	1 cut(s)	2056
Bbv12I	GWGCWC	5 cut(s)	264, 754, 1025, 1471, 1901
BbvI	GCAGC	7 cut(s)	267, 799, 962, 1552, 1663, 1727, 1940
BccI	CCATC	7 cut(s)	419, 588, 733, 830, 1019, 1058, 2300
BceAI	ACGGC	1 cut(s)	2041
BciT130I	CCWGG	3 cut(s)	562, 1098, 1322
BciVI	GTATCC	1 cut(s)	1901
BclI	TGATCA	2 cut(s)	1756, 2043
BcnI	CCSGG	3 cut(s)	747, 1548, 1851
BcoDI	GTCTC	2 cut(s)	1194, 1411
BfaI	CTAG	6 cut(s)	863, 1413, 1428, 1494, 1611, 1665
BfoI	RGCGCY	1 cut(s)	381
BfuI	GTATCC	1 cut(s)	1901
BglI	GCCNNNNNGGC	1 cut(s)	992
BlpI	GCTNAGC	1 cut(s)	243
BmcAI	AGTACT	1 cut(s)	1120
Bme1390I	CCNGG	6 cut(s)	562, 747, 1098, 1322, 1548, 1851
Bme18I	GGWCC	3 cut(s)	965, 1499, 1586
BmeT110I	CYCGRG	3 cut(s)	263, 443, 732
BmgT120I	GGNCC	4 cut(s)	441, 965, 1499, 1586
BmrFI	CCNGG	6 cut(s)	562, 747, 1098, 1322, 1548, 1851
BmrI	ACTGGG	1 cut(s)	1497
BmsI	GCATC	4 cut(s)	137, 154, 638, 2166
BmuI	ACTGGG	1 cut(s)	1497
BpiI	GAAGAC	1 cut(s)	2056
BplI	GAGNNNNNCTC	2 cut(s)	1316, 1348
BpmI	CTGGAG	3 cut(s)	453, 1302, 1343
Bpu1102I	GCTNAGC	1 cut(s)	243
Bpu14I	TTCGAA	1 cut(s)	1511
BpuMI	CCSGG	3 cut(s)	747, 1548, 1851
BsaBI	GATNNNNATC	1 cut(s)	144
BsaI	GGTCTC	2 cut(s)	1194, 1411
BsaJI	CCNNGG	7 cut(s)	225, 476, 646, 998, 1096, 1234, 1850
BsaWI	WCCGGW	1 cut(s)	1032
BsaXI	ACNNNNNCTCC	6 cut(s)	741, 771, 831, 836, 861, 866
Bsc4I	CCNNNNNNNGG	5 cut(s)	417, 492, 514, 586, 1327
Bse118I	RCCGGY	1 cut(s)	1592
Bse1I	ACTGG	3 cut(s)	436, 1126, 1503
Bse21I	CCTNAGG	1 cut(s)	2109
Bse3DI	GCAATG	6 cut(s)	721, 822, 897, 927, 1560, 1671
Bse8I	GATNNNNATC	1 cut(s)	144
BseBI	CCWGG	3 cut(s)	562, 1098, 1322
BseDI	CCNNGG	7 cut(s)	225, 476, 646, 998, 1096, 1234, 1850
BseGI	GGATG	5 cut(s)	128, 744, 794, 826, 1696
BseJI	GATNNNNATC	1 cut(s)	144
BseLI	CCNNNNNNNGG	5 cut(s)	417, 492, 514, 586, 1327
BseMI	GCAATG	6 cut(s)	721, 822, 897, 927, 1560, 1671
BseMII	CTCAG	5 cut(s)	257, 993, 1496, 1503, 2150
BseNI	ACTGG	3 cut(s)	436, 1126, 1503
BseRI	GAGGAG	3 cut(s)	1299, 1340, 1892
BseSI	GKGCMC	1 cut(s)	1901
BseXI	GCAGC	7 cut(s)	267, 799, 962, 1552, 1663, 1727, 1940
BseYI	CCCAGC	2 cut(s)	677, 1042
BsgI	GTGCAG	2 cut(s)	969, 1662
Bsh1236I	CGCG	3 cut(s)	478, 1019, 1212
Bsh1285I	CGRYCG	1 cut(s)	403
BshFI	GGCC	7 cut(s)	304, 442, 579, 1304, 1573, 1596, 1873
BshNI	GGYRCC	2 cut(s)	557, 2104
BsiEI	CGRYCG	1 cut(s)	403
BsiHKAI	GWGCWC	5 cut(s)	264, 754, 1025, 1471, 1901
BsiHKCI	CYCGRG	3 cut(s)	263, 443, 732
BsiSI	CCGG	7 cut(s)	747, 1033, 1547, 1593, 1797, 1850, 1874
BslFI	GGGAC	3 cut(s)	1572, 1654, 2274
BslI	CCNNNNNNNGG	5 cut(s)	417, 492, 514, 586, 1327
BsmAI	GTCTC	2 cut(s)	1194, 1411
BsmFI	GGGAC	3 cut(s)	1572, 1654, 2274
BsmI	GAATGC	2 cut(s)	477, 2077
BsnI	GGCC	7 cut(s)	304, 442, 579, 1304, 1573, 1596, 1873
Bso31I	GGTCTC	2 cut(s)	1194, 1411
BsoBI	CYCGRG	3 cut(s)	263, 443, 732
Bsp119I	TTCGAA	1 cut(s)	1511
Bsp1286I	GDGCHC	7 cut(s)	264, 357, 754, 1025, 1471, 1712, 1901
Bsp1407I	TGTACA	1 cut(s)	765
Bsp143I	GATC	5 cut(s)	187, 1756, 1846, 1857, 2043
Bsp1720I	GCTNAGC	1 cut(s)	243
Bsp19I	CCATGG	1 cut(s)	225
BspACI	CCGC	9 cut(s)	222, 239, 476, 478, 761, 1212, 1253, 1713, 2075
BspANI	GGCC	7 cut(s)	304, 442, 579, 1304, 1573, 1596, 1873
BspCNI	CTCAG	5 cut(s)	256, 992, 1495, 1502, 2149
BspFNI	CGCG	3 cut(s)	478, 1019, 1212
BspPI	GGATC	2 cut(s)	182, 1841
BspQI	GCTCTTC	1 cut(s)	124
BspT104I	TTCGAA	1 cut(s)	1511
BspT107I	GGYRCC	2 cut(s)	557, 2104
BspTNI	GGTCTC	2 cut(s)	1194, 1411
BsrDI	GCAATG	6 cut(s)	721, 822, 897, 927, 1560, 1671
BsrFI	RCCGGY	1 cut(s)	1592
BsrGI	TGTACA	1 cut(s)	765
BsrI	ACTGG	3 cut(s)	436, 1126, 1503
BssAI	RCCGGY	1 cut(s)	1592
BssECI	CCNNGG	7 cut(s)	225, 476, 646, 998, 1096, 1234, 1850
BssMI	GATC	5 cut(s)	187, 1756, 1846, 1857, 2043
BssNAI	GTATAC	1 cut(s)	9
BssT1I	CCWWGG	3 cut(s)	225, 646, 998
Bst1107I	GTATAC	1 cut(s)	9
Bst2UI	CCWGG	3 cut(s)	562, 1098, 1322
Bst4CI	ACNGT	4 cut(s)	614, 1235, 1450, 1630
Bst6I	CTCTTC	4 cut(s)	63, 124, 1106, 2195
BstAPI	GCANNNNNTGC	1 cut(s)	1814
BstAUI	TGTACA	1 cut(s)	765
BstBI	TTCGAA	1 cut(s)	1511
BstC8I	GCNNGC	4 cut(s)	50, 779, 1021, 1356
BstDEI	CTNAG	6 cut(s)	243, 979, 1482, 1489, 2109, 2136
BstDSI	CCRYGG	3 cut(s)	225, 476, 1234
BstENI	CCTNNNNNAGG	1 cut(s)	1325
BstF5I	GGATG	5 cut(s)	128, 744, 794, 826, 1696
BstFNI	CGCG	3 cut(s)	478, 1019, 1212
BstH2I	RGCGCY	1 cut(s)	381
BstHHI	GCGC	2 cut(s)	380, 1019
BstKTI	GATC	5 cut(s)	190, 1759, 1849, 1860, 2046
BstMAI	GTCTC	2 cut(s)	1194, 1411
BstMBI	GATC	5 cut(s)	187, 1756, 1846, 1857, 2043
BstMCI	CGRYCG	1 cut(s)	403
BstMWI	GCNNNNNNNGC	8 cut(s)	134, 604, 683, 749, 758, 992, 1286, 1814
BstNI	CCWGG	3 cut(s)	562, 1098, 1322
BstNSI	RCATGY	4 cut(s)	117, 758, 1656, 1826
BstSCI	CCNGG	6 cut(s)	560, 745, 1096, 1320, 1546, 1849
BstSLI	GKGCMC	1 cut(s)	1901
BstUI	CGCG	3 cut(s)	478, 1019, 1212
BstV1I	GCAGC	7 cut(s)	267, 799, 962, 1552, 1663, 1727, 1940
BstV2I	GAAGAC	1 cut(s)	2056
BstX2I	RGATCY	1 cut(s)	187
BstXI	CCANNNNNNTGG	1 cut(s)	653
BstYI	RGATCY	1 cut(s)	187
BstZ17I	GTATAC	1 cut(s)	9
Bsu36I	CCTNAGG	1 cut(s)	2109
BsuI	GTATCC	1 cut(s)	1901
BsuRI	GGCC	7 cut(s)	304, 442, 579, 1304, 1573, 1596, 1873
BtgI	CCRYGG	3 cut(s)	225, 476, 1234
BtsCI	GGATG	5 cut(s)	128, 744, 794, 826, 1696
BtsIMutI	CAGTG	1 cut(s)	1626
Cac8I	GCNNGC	4 cut(s)	50, 779, 1021, 1356
CfoI	GCGC	2 cut(s)	380, 1019
Cfr10I	RCCGGY	1 cut(s)	1592
Cfr13I	GGNCC	4 cut(s)	441, 965, 1499, 1586
Cfr42I	CCGCGG	1 cut(s)	479
Csp6I	GTAC	6 cut(s)	657, 766, 1093, 1119, 1208, 1685
CviQI	GTAC	6 cut(s)	657, 766, 1093, 1119, 1208, 1685
DdeI	CTNAG	6 cut(s)	243, 979, 1482, 1489, 2109, 2136
DpnI	GATC	5 cut(s)	189, 1758, 1848, 1859, 2045
DpnII	GATC	5 cut(s)	187, 1756, 1846, 1857, 2043
DraIII	CACNNNGTG	1 cut(s)	107
DrdI	GACNNNNNNGTC	1 cut(s)	1238
DseDI	GACNNNNNNGTC	1 cut(s)	1238
EaeI	YGGCCR	1 cut(s)	1302
Eam1104I	CTCTTC	4 cut(s)	63, 124, 1106, 2195
EarI	CTCTTC	4 cut(s)	63, 124, 1106, 2195
EciI	GGCGGA	2 cut(s)	211, 1268
Ecl136II	GAGCTC	1 cut(s)	262
Eco130I	CCWWGG	3 cut(s)	225, 646, 998
Eco147I	AGGCCT	1 cut(s)	304
Eco24I	GRGCYC	3 cut(s)	264, 357, 1712
Eco31I	GGTCTC	2 cut(s)	1194, 1411
Eco32I	GATATC	2 cut(s)	805, 1924
Eco47I	GGWCC	3 cut(s)	965, 1499, 1586
Eco53kI	GAGCTC	1 cut(s)	262
Eco57I	CTGAAG	2 cut(s)	672, 1165
Eco81I	CCTNAGG	1 cut(s)	2109
Eco88I	CYCGRG	3 cut(s)	263, 443, 732
EcoICRI	GAGCTC	1 cut(s)	262
EcoNI	CCTNNNNNAGG	1 cut(s)	1325
EcoO109I	RGGNCCY	2 cut(s)	1499, 1586
EcoRI	GAATTC	2 cut(s)	312, 2254
EcoRII	CCWGG	3 cut(s)	560, 1096, 1320
EcoRV	GATATC	2 cut(s)	805, 1924
EcoT14I	CCWWGG	3 cut(s)	225, 646, 998
EcoT38I	GRGCYC	3 cut(s)	264, 357, 1712
ErhI	CCWWGG	3 cut(s)	225, 646, 998
FaqI	GGGAC	3 cut(s)	1572, 1654, 2274
FauI	CCCGC	2 cut(s)	471, 1720
FbaI	TGATCA	2 cut(s)	1756, 2043
FblI	GTMKAC	3 cut(s)	8, 519, 843
FokI	GGATG	5 cut(s)	115, 751, 801, 833, 1683
FriOI	GRGCYC	3 cut(s)	264, 357, 1712
FspBI	CTAG	6 cut(s)	863, 1413, 1428, 1494, 1611, 1665
GlaI	GCGC	2 cut(s)	379, 1018
GsaI	CCCAGC	2 cut(s)	681, 1046
GsuI	CTGGAG	3 cut(s)	453, 1302, 1343
HaeII	RGCGCY	1 cut(s)	381
HaeIII	GGCC	7 cut(s)	304, 442, 579, 1304, 1573, 1596, 1873
HapII	CCGG	7 cut(s)	747, 1033, 1547, 1593, 1797, 1850, 1874
HhaI	GCGC	2 cut(s)	380, 1019
Hin6I	GCGC	2 cut(s)	378, 1017
HinP1I	GCGC	2 cut(s)	378, 1017
HincII	GTYRAC	2 cut(s)	181, 1555
HindII	GTYRAC	2 cut(s)	181, 1555
HindIII	AAGCTT	1 cut(s)	454
HpaII	CCGG	7 cut(s)	747, 1033, 1547, 1593, 1797, 1850, 1874
HphI	GGTGA	5 cut(s)	308, 562, 1073, 1274, 2263
Hpy166II	GTNNAC	9 cut(s)	9, 181, 520, 766, 844, 1318, 1555, 1828, 1899
Hpy188III	TCNNGA	4 cut(s)	158, 620, 1464, 1601
Hpy8I	GTNNAC	9 cut(s)	9, 181, 520, 766, 844, 1318, 1555, 1828, 1899
HpyAV	CCTTC	8 cut(s)	201, 212, 224, 368, 1387, 1436, 1527, 1607
HpyCH4III	ACNGT	4 cut(s)	614, 1235, 1450, 1630
HpyCH4IV	ACGT	2 cut(s)	846, 2064
HpyF10VI	GCNNNNNNNGC	8 cut(s)	134, 604, 683, 749, 758, 992, 1286, 1814
HpyF3I	CTNAG	6 cut(s)	243, 979, 1482, 1489, 2109, 2136
HpySE526I	ACGT	2 cut(s)	846, 2064
HspAI	GCGC	2 cut(s)	378, 1017
KflI	GGGWCCC	1 cut(s)	1586
Ksp22I	TGATCA	2 cut(s)	1756, 2043
KspI	CCGCGG	1 cut(s)	479
Kzo9I	GATC	5 cut(s)	187, 1756, 1846, 1857, 2043
LguI	GCTCTTC	1 cut(s)	124
LmnI	GCTCC	8 cut(s)	99, 748, 749, 925, 1000, 1286, 1549, 1707
Lsp1109I	GCAGC	7 cut(s)	267, 799, 962, 1552, 1663, 1727, 1940
LweI	GCATC	4 cut(s)	137, 154, 638, 2166
MaeI	CTAG	6 cut(s)	863, 1413, 1428, 1494, 1611, 1665
MaeII	ACGT	2 cut(s)	846, 2064
MaeIII	GTNAC	8 cut(s)	109, 1147, 1229, 1750, 1885, 2011, 2056, 2299
MalI	GATC	5 cut(s)	189, 1758, 1848, 1859, 2045
MboI	GATC	5 cut(s)	187, 1756, 1846, 1857, 2043
MfeI	CAATTG	2 cut(s)	969, 1809
MflI	RGATCY	1 cut(s)	187
MhlI	GDGCHC	7 cut(s)	264, 357, 754, 1025, 1471, 1712, 1901
MlsI	TGGCCA	1 cut(s)	1304
MluNI	TGGCCA	1 cut(s)	1304
MlyI	GAGTC	7 cut(s)	263, 275, 457, 1325, 1354, 1388, 1560
MmeI	TCCRAC	1 cut(s)	673
Mox20I	TGGCCA	1 cut(s)	1304
MscI	TGGCCA	1 cut(s)	1304
MseI	TTAA	2 cut(s)	1928, 2130
MslI	CAYNNNNRTG	5 cut(s)	419, 1631, 1665, 1944, 2297
Msp20I	TGGCCA	1 cut(s)	1304
MspA1I	CMGCKG	3 cut(s)	247, 478, 677
MspI	CCGG	7 cut(s)	747, 1033, 1547, 1593, 1797, 1850, 1874
MspR9I	CCNGG	6 cut(s)	562, 747, 1098, 1322, 1548, 1851
MunI	CAATTG	2 cut(s)	969, 1809
Mva1269I	GAATGC	2 cut(s)	477, 2077
MvaI	CCWGG	3 cut(s)	562, 1098, 1322
MvnI	CGCG	3 cut(s)	478, 1019, 1212
MwoI	GCNNNNNNNGC	8 cut(s)	134, 604, 683, 749, 758, 992, 1286, 1814
NciI	CCSGG	3 cut(s)	747, 1548, 1851
NcoI	CCATGG	1 cut(s)	225
NdeII	GATC	5 cut(s)	187, 1756, 1846, 1857, 2043
NmuCI	GTSAC	4 cut(s)	1147, 1229, 1885, 2299
NspI	RCATGY	4 cut(s)	117, 758, 1656, 1826
NspV	TTCGAA	1 cut(s)	1511
PaeR7I	CTCGAG	2 cut(s)	263, 732
PceI	AGGCCT	1 cut(s)	304
PciI	ACATGT	2 cut(s)	754, 1822
PciSI	GCTCTTC	1 cut(s)	124
PctI	GAATGC	2 cut(s)	477, 2077
PfeI	GAWTC	6 cut(s)	1038, 1085, 1607, 1768, 2071, 2205
PflMI	CCANNNNNTGG	2 cut(s)	492, 586
PfoI	TCCNGGA	2 cut(s)	745, 1546
PleI	GAGTC	7 cut(s)	262, 274, 456, 1325, 1354, 1387, 1559
PpsI	GAGTC	7 cut(s)	262, 274, 456, 1325, 1354, 1387, 1559
PpuMI	RGGWCCY	2 cut(s)	1499, 1586
PscI	ACATGT	2 cut(s)	754, 1822
Psp124BI	GAGCTC	1 cut(s)	264
Psp5II	RGGWCCY	2 cut(s)	1499, 1586
Psp6I	CCWGG	3 cut(s)	560, 1096, 1320
PspFI	CCCAGC	2 cut(s)	677, 1042
PspGI	CCWGG	3 cut(s)	560, 1096, 1320
PspPI	GGNCC	4 cut(s)	441, 965, 1499, 1586
PspPPI	RGGWCCY	2 cut(s)	1499, 1586
PspXI	VCTCGAGB	2 cut(s)	263, 732
PsuI	RGATCY	1 cut(s)	187
PvuII	CAGCTG	2 cut(s)	247, 677
RsaI	GTAC	6 cut(s)	658, 767, 1094, 1120, 1209, 1686
RsaNI	GTAC	6 cut(s)	657, 766, 1093, 1119, 1208, 1685
RseI	CAYNNNNRTG	5 cut(s)	419, 1631, 1665, 1944, 2297
SacI	GAGCTC	1 cut(s)	264
SacII	CCGCGG	1 cut(s)	479
SapI	GCTCTTC	1 cut(s)	124
SaqAI	TTAA	2 cut(s)	1928, 2130
Sau3AI	GATC	5 cut(s)	187, 1756, 1846, 1857, 2043
Sau96I	GGNCC	4 cut(s)	441, 965, 1499, 1586
ScaI	AGTACT	1 cut(s)	1120
SchI	GAGTC	7 cut(s)	263, 275, 457, 1325, 1354, 1388, 1560
ScrFI	CCNGG	6 cut(s)	562, 747, 1098, 1322, 1548, 1851
SduI	GDGCHC	7 cut(s)	264, 357, 754, 1025, 1471, 1712, 1901
SfaNI	GCATC	4 cut(s)	137, 154, 638, 2166
Sfr274I	CTCGAG	2 cut(s)	263, 732
Sfr303I	CCGCGG	1 cut(s)	479
SfuI	TTCGAA	1 cut(s)	1511
SgrBI	CCGCGG	1 cut(s)	479
SinI	GGWCC	3 cut(s)	965, 1499, 1586
SlaI	CTCGAG	2 cut(s)	263, 732
SmiMI	CAYNNNNRTG	5 cut(s)	419, 1631, 1665, 1944, 2297
SmlI	CTYRAG	2 cut(s)	263, 732
SmoI	CTYRAG	2 cut(s)	263, 732
SseBI	AGGCCT	1 cut(s)	304
SsiI	CCGC	9 cut(s)	222, 239, 476, 478, 761, 1212, 1253, 1713, 2075
SspMI	CTAG	6 cut(s)	863, 1413, 1428, 1494, 1611, 1665
SstI	GAGCTC	1 cut(s)	264
StuI	AGGCCT	1 cut(s)	304
StyD4I	CCNGG	6 cut(s)	560, 745, 1096, 1320, 1546, 1849
StyI	CCWWGG	3 cut(s)	225, 646, 998
TaaI	ACNGT	4 cut(s)	614, 1235, 1450, 1630
TaiI	ACGT	2 cut(s)	849, 2067
TaqI	TCGA	9 cut(s)	159, 264, 357, 403, 733, 916, 1511, 1600, 2195
TaqII	GACCGA	2 cut(s)	324, 389
TatI	WGTACW	2 cut(s)	765, 1118
TauI	GCSGC	3 cut(s)	242, 478, 1215
TfiI	GAWTC	6 cut(s)	1038, 1085, 1607, 1768, 2071, 2205
Tru1I	TTAA	2 cut(s)	1928, 2130
Tru9I	TTAA	2 cut(s)	1928, 2130
TscAI	CASTG	1 cut(s)	1633
TseFI	GTSAC	4 cut(s)	1147, 1229, 1885, 2299
TseI	GCWGC	7 cut(s)	280, 812, 950, 1565, 1676, 1715, 1953
Tsp45I	GTSAC	4 cut(s)	1147, 1229, 1885, 2299
TspDTI	ATGAA	2 cut(s)	1170, 1988
TspGWI	ACGGA	1 cut(s)	1797
TspRI	CASTG	1 cut(s)	1633
Van91I	CCANNNNNTGG	2 cut(s)	492, 586
VneI	GTGCAC	1 cut(s)	1897
VpaK11BI	GGWCC	3 cut(s)	965, 1499, 1586
XagI	CCTNNNNNAGG	1 cut(s)	1325
XapI	RAATTY	7 cut(s)	312, 321, 933, 1172, 1621, 1962, 2254
XceI	RCATGY	4 cut(s)	117, 758, 1656, 1826
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1054, 2089
XhoI	CTCGAG	2 cut(s)	263, 732
XmiI	GTMKAC	3 cut(s)	8, 519, 843
XspI	CTAG	6 cut(s)	863, 1413, 1428, 1494, 1611, 1665
ZrmI	AGTACT	1 cut(s)	1120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.