Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0014891

Physical Location & Seq

Genomic Coordinates Forward (+)

18783327 .. 18787507

Gene Structure 4181 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g22900.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3252 bp

ATGGTGAGCAGAAGGAATTCACCTTATGATTGTGGCCAGCTGATAGTTGAAATCACCACTACCACTTTCACCAGAGCGAAGAAGAGGTGGCGGATGGCGTATGCAGCCTTGTATGCTGTAAGGGTCATGCTATCACTTCCCAAAGAACTTATGTATAAGAGGAGCAACTACTACAAGGGCTACTCTGAGATCTCTGAGGATGGCTCTTTTGTTGGATTCCAAGCTCTCAAAGGAAGCCAGCGGGATAGGGAAGATTTATACTCTGGCCTTGAGCATGGGGCAAAAGGCTCTGCACCACTGGAGCTACAAGATTATGAGTCTCGTTCTTACACTTCCCTTGACGTGAAACCAAGCACTTCTCATGATGAAACTGGTCATTATGGTTCTGTCCCCAACAACATTGACCATGAAGGACTTGCAAAAATGGTGAAGGAGAAAGACTTGGTTGCTCTAGGAAAGTTTGGAGGAGTTACTGGCATAACCACTTCTCTTGGAACAAATACAGAGAAAGGGTTACCAGGCAACGACATAGAAATCAGCAAACGCCGCGACTTATTCGGCTCAAATACATACCCAAAGCCGCCTTCAAAAGGGCTCTTCTATTTTGTGGTGGACGCTCTGAAAGACATGACGATTCTGATTCTATGTGTCTGTGCGGCACTTTCTTTGGCATTTGGAATCAAAGAGTATGGAGTGGAGGAAGGCTGGTATGAAGGTGGAAGCATCTTTGTTGCTGTATTCATTGTCATTGTTGTCTCAGCTCTGAGTAACTTCAGACAGGAAATCCAATTCGACAAACTGTCTAAAATAAGCAGCAACATCAAGGTTGAGGTATTTCGAGACAGACAGCGACAAGAAATCTCCATCTTTAATGTTGTGGTTGGAGATGTAGTATTCCTTAACATTGGAGATCAGATTCCTGCAGACGGTGTGTTCTTAGATGGCTACTCATTTCAAGTGGACGAGTCCAGCATGACCGGGGAGAGCGACTATGTAGAAGTTGATTCTACAAAGAATCCCTTCCTCTTGTCTGGTGCAAAGGTGGCTGATGGTTATGGTAGAATGCTGGTCACATCAGTTGGGATGAACACTGCATGGGGCGAGATGATGAGCTCAATTTCGCAGGAATCAAATGTAAGAACTCCATTACAAGCTCGGCTAGACAAACTTACCTCTTCAATTGGAAAGGTAGGCCTTGCAGTTGCTTTCTTAGTTCTTCTAGTCTTGTTGATTCGTTATTTCACTGGCAACACAAAAGATAAGAATGGCAATAAGGAGTATATTGGTAGCAAAACAAAAACAGATGATGTGTTGAATGCAGTAGTGCGGATTGTATCTGCTGCAGTCACTATAGTGGTGGTGGCAATTCCTGAAGGCTTGCCACTGGCTGTCACACTAACACTAGCTTACTCTATGAAAAGAATGATGAAAGATCAGGCAATGGTTAGAAAACTATCGGCTTGTGAGACAATGGGGTCAGCAACCGTTATCTGCACTGACAAAACAGGAACTCTGACACTAAACCAAATGAAAGTAACTAAGTTTTGGGTAGGCCAAGACTCTATTGCAGAAGATAATTCATCCATCACACCAAATGTTCGTGAGTTGTTCTATCAAGGAGTTGGTTTGAACACAACTGGGAGTGTTTTCAAACCTCTTACAGGATCCAAACCCGAAATCTCCGGCAGCCCAACAGAGAAGGCAATACTCTATTGGGTTGTTTTAGATTTGGGTATGGACATGGAAGAACTGAAGCCCAGGTATGACATTCTCCATGTTGAAACATTTAATTCAGACAAGAAACGAAGTGGGGTTCTTATAAAGAAAAAAAATGACAACACCATCCATGTGCATTGGAAAGGAGCTGCTGAGATGATAGTTGCAACATGCTCAAGGTATTATGATACCAATGGAACTGTAAAGCCCTTGGATGTAGATACAAGGTCTAACCTTCAGAAAATTATCCAAGGGATGGCAGCTAGTAGCCTCCGATGCATTGCTTTCGCTCATGCACAAATTTCAGAGGAAGAAATTGAATACAGTGATGACGACAAGACTCACCAAAGGCTCAAAGAAGATGGGCTGATCTTGCTGGGGATAGTTGGTCTCAAAGATCCATGTCGACCAGGGGTCATCGATGCTGTGAGAGTCTGCAAGGCTGCAGGTGTGGACATCAAAATGATAACTGGAGACAATATTTTCACAGCAAAAGCTATAGCTACAGAATGTGGAATACTAAAGAAAGAGAACCAACCTAGTGATGGACAAGTTGTAGAAGGAGCCGAATTTCGAAACTACACTGACGCAGAAAGAATGCAGAAGGTTGATAACATCCGTGTGATGGCAAGGTCCTCCCCATTCGACAAGCTTTTAATGGTACAGTGTTTGAAGCAGAAAGGTCATGTGGTTGCAGTCACTGGTGATGGTACAAATGATGCACCTGCATTGAAAGAAGCTGATATAGGACTTTCCATGGGAATCCAAGGAACTGAGGTGGCAAAAGAAAGCTCGGATATCATCATCTTGGATGACAACTTCAATTCTGTGGCCACGGTTTTGAGATGGGGGAGATGTGTTTATAACAATATACAGAAATTCATCCAATTTCAACTAACCGTTAATGTTGCAGCTCTAGTAATCAACTTTATTGCAGCAGTTTCAGCTGGTGAAGTTCCCTTAACAGCAGTTCAATTACTTTGGGTGAATCTCATCATGGACACGCTAGGTGCTCTGGCTCTTGCTACCGAGCGACCAACTAATGAGCTAATGGAGAGGCTACCTGTGGGCCGCACCGCTCCACTCATAACCAATATTATGTGGAGGAATCTTCTAGCTCAAGCTCTATATCAAATAGCTGTTCTCTTGATCTTGCAGTTCCAGGGCGAGTGCATATTCAATGTCACCGCTGCGGTGAATGATACTTTGATTTTCAATACCTTTGTACTATGCCAAGTTTTTAACGAGTTCAATTCAAGGAGCATGGAGAAGAAGAATGTATTCAAAGGTATCCTCAGGAACAGACTGTTTATTGGGATTGTGGGGGTAACTATTGTTCTTCAAGTTGTGATGGTGGAGTTTCTGAAGAAGTTTGCAGATACAGAAAAGTTGAATGTTCAGCAATGGGTAGTTTGTATCGTAATAGCATCTGTATCATGGCCACTTGGTTGGGCTGTGAAGTTTGTACCTGTTTCAGAGGATCCATACTTCAGAATTATCAAGAAGTCACTCGTCAGATTCAAAAACATTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1084

Amino Acids

119.64

Weight (kDa)

7.11

Isoelectric Point (pI)

31.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	155 - 222	3.8e-11	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	274 - 373	5.7e-22	P-type ATPase actuator domain
Cation_ATPase	PF13246	550 - 709	1.1e-30	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	679 - 820	2.1e-12	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	891 - 1061	1.6e-44	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0014891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63380
fragaria_vesca	FvH4_2g22900
malus_domestica	MD11G1278100.v1.1
prunus_persica	Prupe.8G234200_v2.0.a1 Prupe.8G234200_v2.0.a1
pyrus_communis	pycom11g24580
rosa_chinensis	RchiOBHm_Chr6g0289831
rosa_laevigata	RLG00000012264
rosa_multiflora	Rmu_sc0032573.1_g000001 Rmu_ssc0000314.1_g000015
rosa_roxburghii	Rroxscaffold_4G00321460 Rroxscaffold_7G00177520 Rroxscaffold_7G00178050
rosa_rugosa	Rorug06G0207300
rosa_samantha	Rh6AG318800
rosa_wichuraiana	Rw6G027500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1820, 2580
AarI	CACCTGC	2 cut(s)	2153, 2449
AasI	GACNNNNNNGTC	1 cut(s)	1474
Acc36I	ACCTGC	2 cut(s)	2153, 2449
AccB7I	CCANNNNNTGG	1 cut(s)	1972
AccBSI	CCGCTC	1 cut(s)	2795
AccI	GTMKAC	1 cut(s)	2122
AccII	CGCG	1 cut(s)	549
AclWI	GGATC	5 cut(s)	1659, 1672, 2108, 3191, 3204
AcoI	YGGCCR	3 cut(s)	34, 2547, 3155
AcsI	RAATTY	4 cut(s)	16, 2016, 2285, 2594
AcuI	CTGAAG	6 cut(s)	757, 1392, 1772, 1937, 3101, 3190
AfaI	GTAC	4 cut(s)	2379, 2428, 2943, 3183
AfiI	CCNNNNNNNGG	6 cut(s)	590, 926, 1661, 1972, 2261, 2341
AhdI	GACNNNNNGTC	2 cut(s)	799, 2129
AjiI	CACGTC	1 cut(s)	343
AjnI	CCWGG	4 cut(s)	517, 1757, 2125, 2877
AjuI	GAANNNNNNNTTGG	2 cut(s)	568, 600
AleI	CACNNNNGTG	1 cut(s)	1352
Alw21I	GWGCWC	2 cut(s)	1115, 2731
Alw26I	GTCTC	6 cut(s)	324, 760, 834, 1460, 2111, 2184
AlwI	GGATC	5 cut(s)	1659, 1672, 2108, 3191, 3204
AlwNI	CAGNNNCTG	1 cut(s)	2417
AoxI	GGCC	7 cut(s)	34, 265, 1192, 1552, 2547, 2785, 3155
ApoI	RAATTY	4 cut(s)	16, 2016, 2285, 2594
Asp700I	GAANNNNTTC	3 cut(s)	16, 1019, 2996
AspS9I	GGNCC	2 cut(s)	2349, 2785
AsuC2I	CCSGG	1 cut(s)	979
AsuII	TTCGAA	1 cut(s)	2290
AvaII	GGWCC	1 cut(s)	2349
AxyI	CCTNAGG	1 cut(s)	3011
BalI	TGGCCA	3 cut(s)	36, 2549, 3157
BamHI	GGATCC	2 cut(s)	1664, 3196
BanII	GRGCYC	2 cut(s)	597, 1115
Bbv12I	GWGCWC	2 cut(s)	1115, 2731
BcgI	CGANNNNNNTGC	2 cut(s)	1984, 2018
BciT130I	CCWGG	4 cut(s)	519, 1759, 2127, 2879
BciVI	GTATCC	1 cut(s)	3017
BcnI	CCSGG	1 cut(s)	979
BcoDI	GTCTC	6 cut(s)	324, 760, 834, 1460, 2111, 2184
BfaI	CTAG	9 cut(s)	452, 1160, 1220, 1403, 1980, 2256, 2633, 2723, 2831
BfmI	CTRYAG	6 cut(s)	921, 1341, 1350, 2160, 2214, 2220
BfuAI	ACCTGC	2 cut(s)	2153, 2449
BfuI	GTATCC	1 cut(s)	3017
BglII	AGATCT	1 cut(s)	189
Bme1390I	CCNGG	5 cut(s)	519, 979, 1759, 2127, 2879
Bme18I	GGWCC	1 cut(s)	2349
BmeRI	GACNNNNNGTC	2 cut(s)	799, 2129
BmgBI	CACGTC	1 cut(s)	343
BmgT120I	GGNCC	2 cut(s)	2349, 2785
BmiI	GGNNCC	3 cut(s)	1666, 2281, 3198
BmrFI	CCNGG	5 cut(s)	519, 979, 1759, 2127, 2879
BmrI	ACTGGG	1 cut(s)	1647
BmsI	GCATC	5 cut(s)	732, 1982, 2128, 2425, 3152
BmuI	ACTGGG	1 cut(s)	1647
BplI	GAGNNNNNCTC	2 cut(s)	188, 220
BpmI	CTGGAG	2 cut(s)	320, 2208
Bpu14I	TTCGAA	1 cut(s)	2290
BpuEI	CTTGAG	3 cut(s)	290, 1876, 2820
BpuMI	CCSGG	1 cut(s)	979
Bsa29I	ATCGAT	1 cut(s)	2136
BsaI	GGTCTC	1 cut(s)	2111
BsaJI	CCNNGG	9 cut(s)	978, 1757, 1926, 1966, 2126, 2472, 2482, 2550, 2878
BsaXI	ACNNNNNCTCC	2 cut(s)	876, 906
Bsc4I	CCNNNNNNNGG	6 cut(s)	590, 926, 1661, 1972, 2261, 2341
Bse1I	ACTGG	8 cut(s)	303, 376, 478, 1249, 1389, 1642, 2191, 2422
Bse21I	CCTNAGG	1 cut(s)	3011
Bse3DI	GCAATG	3 cut(s)	1446, 1995, 3125
BseBI	CCWGG	4 cut(s)	519, 1759, 2127, 2879
BseCI	ATCGAT	1 cut(s)	2136
BseDI	CCNNGG	9 cut(s)	978, 1757, 1926, 1966, 2126, 2472, 2482, 2550, 2878
BseLI	CCNNNNNNNGG	6 cut(s)	590, 926, 1661, 1972, 2261, 2341
BseMI	GCAATG	3 cut(s)	1446, 1995, 3125
BseMII	CTCAG	7 cut(s)	177, 186, 755, 771, 1860, 2481, 3025
BseNI	ACTGG	8 cut(s)	303, 376, 478, 1249, 1389, 1642, 2191, 2422
BseRI	GAGGAG	2 cut(s)	175, 480
BseYI	CCCAGC	1 cut(s)	2092
BsgI	GTGCAG	2 cut(s)	276, 1477
Bsh1236I	CGCG	1 cut(s)	549
BshFI	GGCC	7 cut(s)	36, 267, 1194, 1554, 2549, 2787, 3157
BshVI	ATCGAT	1 cut(s)	2136
BsiHKAI	GWGCWC	2 cut(s)	1115, 2731
BsiSI	CCGG	2 cut(s)	978, 1683
BslFI	GGGAC	1 cut(s)	374
BslI	CCNNNNNNNGG	6 cut(s)	590, 926, 1661, 1972, 2261, 2341
BsmAI	GTCTC	6 cut(s)	324, 760, 834, 1460, 2111, 2184
BsmFI	GGGAC	1 cut(s)	374
BsmI	GAATGC	3 cut(s)	1068, 1321, 2319
BsnI	GGCC	7 cut(s)	36, 267, 1194, 1554, 2549, 2787, 3157
Bso31I	GGTCTC	1 cut(s)	2111
Bsp119I	TTCGAA	1 cut(s)	2290
Bsp1286I	GDGCHC	3 cut(s)	597, 1115, 2731
Bsp143I	GATC	8 cut(s)	189, 910, 1432, 1664, 2085, 2113, 2865, 3196
Bsp19I	CCATGG	1 cut(s)	2472
BspANI	GGCC	7 cut(s)	36, 267, 1194, 1554, 2549, 2787, 3157
BspCNI	CTCAG	7 cut(s)	178, 187, 756, 770, 1861, 2482, 3024
BspDI	ATCGAT	1 cut(s)	2136
BspFNI	CGCG	1 cut(s)	549
BspHI	TCATGA	1 cut(s)	361
BspLI	GGNNCC	3 cut(s)	1666, 2281, 3198
BspMAI	CTGCAG	3 cut(s)	925, 1345, 2164
BspMI	ACCTGC	2 cut(s)	2153, 2449
BspPI	GGATC	5 cut(s)	1659, 1672, 2108, 3191, 3204
BspQI	GCTCTTC	1 cut(s)	602
BspT104I	TTCGAA	1 cut(s)	2290
BspTNI	GGTCTC	1 cut(s)	2111
BsrBI	CCGCTC	1 cut(s)	2795
BsrDI	GCAATG	3 cut(s)	1446, 1995, 3125
BsrI	ACTGG	8 cut(s)	303, 376, 478, 1249, 1389, 1642, 2191, 2422
BssECI	CCNNGG	9 cut(s)	978, 1757, 1926, 1966, 2126, 2472, 2482, 2550, 2878
BssMI	GATC	8 cut(s)	189, 910, 1432, 1664, 2085, 2113, 2865, 3196
BssT1I	CCWWGG	4 cut(s)	1926, 1966, 2472, 2482
Bst2UI	CCWGG	4 cut(s)	519, 1759, 2127, 2879
Bst4CI	ACNGT	9 cut(s)	801, 929, 1486, 1918, 2042, 2382, 2554, 2617, 3024
Bst6I	CTCTTC	3 cut(s)	77, 602, 1180
BstBI	TTCGAA	1 cut(s)	2290
BstC8I	GCNNGC	3 cut(s)	38, 239, 1379
BstDSI	CCRYGG	2 cut(s)	2472, 2550
BstEII	GGTNACC	1 cut(s)	513
BstENI	CCTNNNNNAGG	2 cut(s)	588, 1659
BstFNI	CGCG	1 cut(s)	549
BstKTI	GATC	8 cut(s)	192, 913, 1435, 1667, 2088, 2116, 2868, 3199
BstMAI	GTCTC	6 cut(s)	324, 760, 834, 1460, 2111, 2184
BstMBI	GATC	8 cut(s)	189, 910, 1432, 1664, 2085, 2113, 2865, 3196
BstMWI	GCNNNNNNNGC	7 cut(s)	104, 113, 546, 1043, 1992, 2089, 2660
BstNI	CCWGG	4 cut(s)	519, 1759, 2127, 2879
BstNSI	RCATGY	1 cut(s)	1890
BstPI	GGTNACC	1 cut(s)	513
BstSCI	CCNGG	5 cut(s)	517, 977, 1757, 2125, 2877
BstSFI	CTRYAG	6 cut(s)	921, 1341, 1350, 2160, 2214, 2220
BstUI	CGCG	1 cut(s)	549
BstX2I	RGATCY	4 cut(s)	189, 1664, 2113, 3196
BstXI	CCANNNNNNTGG	1 cut(s)	3165
BstYI	RGATCY	4 cut(s)	189, 1664, 2113, 3196
Bsu15I	ATCGAT	1 cut(s)	2136
Bsu36I	CCTNAGG	1 cut(s)	3011
BsuI	GTATCC	1 cut(s)	3017
BsuRI	GGCC	7 cut(s)	36, 267, 1194, 1554, 2549, 2787, 3157
BsuTUI	ATCGAT	1 cut(s)	2136
BtgI	CCRYGG	2 cut(s)	2472, 2550
BtrI	CACGTC	1 cut(s)	343
BtsI	GCAGTG	1 cut(s)	1089
BtsIMutI	CAGTG	9 cut(s)	296, 1089, 1242, 1382, 1494, 2047, 2298, 2387, 2415
BveI	ACCTGC	2 cut(s)	2153, 2449
Cac8I	GCNNGC	3 cut(s)	38, 239, 1379
CaiI	CAGNNNCTG	1 cut(s)	2417
CciI	TCATGA	1 cut(s)	361
Cfr13I	GGNCC	2 cut(s)	2349, 2785
ClaI	ATCGAT	1 cut(s)	2136
CseI	GACGC	2 cut(s)	623, 2312
Csp6I	GTAC	4 cut(s)	2378, 2427, 2942, 3182
CspCI	CAANNNNNGTGG	2 cut(s)	472, 507
CviQI	GTAC	4 cut(s)	2378, 2427, 2942, 3182
DpnI	GATC	8 cut(s)	191, 912, 1434, 1666, 2087, 2115, 2867, 3198
DpnII	GATC	8 cut(s)	189, 910, 1432, 1664, 2085, 2113, 2865, 3196
DrdI	GACNNNNNNGTC	1 cut(s)	1474
DriI	GACNNNNNGTC	2 cut(s)	799, 2129
DseDI	GACNNNNNNGTC	1 cut(s)	1474
EaeI	YGGCCR	3 cut(s)	34, 2547, 3155
Eam1104I	CTCTTC	3 cut(s)	77, 602, 1180
Eam1105I	GACNNNNNGTC	2 cut(s)	799, 2129
EarI	CTCTTC	3 cut(s)	77, 602, 1180
EciI	GGCGGA	1 cut(s)	106
Ecl136II	GAGCTC	1 cut(s)	1113
Eco130I	CCWWGG	4 cut(s)	1926, 1966, 2472, 2482
Eco147I	AGGCCT	1 cut(s)	1194
Eco24I	GRGCYC	2 cut(s)	597, 1115
Eco31I	GGTCTC	1 cut(s)	2111
Eco32I	GATATC	1 cut(s)	2515
Eco47I	GGWCC	1 cut(s)	2349
Eco53kI	GAGCTC	1 cut(s)	1113
Eco57I	CTGAAG	6 cut(s)	757, 1392, 1772, 1937, 3101, 3190
Eco81I	CCTNAGG	1 cut(s)	3011
Eco91I	GGTNACC	1 cut(s)	513
EcoICRI	GAGCTC	1 cut(s)	1113
EcoNI	CCTNNNNNAGG	2 cut(s)	588, 1659
EcoO109I	RGGNCCY	1 cut(s)	2349
EcoO65I	GGTNACC	1 cut(s)	513
EcoRI	GAATTC	1 cut(s)	16
EcoRII	CCWGG	4 cut(s)	517, 1757, 2125, 2877
EcoRV	GATATC	1 cut(s)	2515
EcoT14I	CCWWGG	4 cut(s)	1926, 1966, 2472, 2482
EcoT22I	ATGCAT	1 cut(s)	1997
EcoT38I	GRGCYC	2 cut(s)	597, 1115
ErhI	CCWWGG	4 cut(s)	1926, 1966, 2472, 2482
FalI	AAGNNNNNCTT	2 cut(s)	1004, 1036
FaqI	GGGAC	1 cut(s)	374
FauI	CCCGC	1 cut(s)	234
FblI	GTMKAC	1 cut(s)	2122
FriOI	GRGCYC	2 cut(s)	597, 1115
FspBI	CTAG	9 cut(s)	452, 1160, 1220, 1403, 1980, 2256, 2633, 2723, 2831
GsaI	CCCAGC	1 cut(s)	2096
GsuI	CTGGAG	2 cut(s)	320, 2208
HaeIII	GGCC	7 cut(s)	36, 267, 1194, 1554, 2549, 2787, 3157
HapII	CCGG	2 cut(s)	978, 1683
HgaI	GACGC	2 cut(s)	623, 2312
HincII	GTYRAC	1 cut(s)	2123
HindII	GTYRAC	1 cut(s)	2123
HindIII	AAGCTT	1 cut(s)	2366
HpaII	CCGG	2 cut(s)	978, 1683
Hpy166II	GTNNAC	4 cut(s)	613, 961, 2123, 2170
Hpy188III	TCNNGA	7 cut(s)	362, 839, 1370, 1601, 2863, 3013, 3217
Hpy8I	GTNNAC	4 cut(s)	613, 961, 2123, 2170
HpyCH4III	ACNGT	9 cut(s)	801, 929, 1486, 1918, 2042, 2382, 2554, 2617, 3024
HpyCH4IV	ACGT	1 cut(s)	342
HpyF10VI	GCNNNNNNNGC	7 cut(s)	104, 113, 546, 1043, 1992, 2089, 2660
HpySE526I	ACGT	1 cut(s)	342
Kzo9I	GATC	8 cut(s)	189, 910, 1432, 1664, 2085, 2113, 2865, 3196
LguI	GCTCTTC	1 cut(s)	602
LmnI	GCTCC	6 cut(s)	162, 301, 1862, 2279, 2800, 2976
LweI	GCATC	5 cut(s)	732, 1982, 2128, 2425, 3152
MaeI	CTAG	9 cut(s)	452, 1160, 1220, 1403, 1980, 2256, 2633, 2723, 2831
MaeII	ACGT	1 cut(s)	342
MalI	GATC	8 cut(s)	191, 912, 1434, 1666, 2087, 2115, 2867, 3198
MbiI	CCGCTC	1 cut(s)	2795
MboI	GATC	8 cut(s)	189, 910, 1432, 1664, 2085, 2113, 2865, 3196
MfeI	CAATTG	1 cut(s)	1179
MflI	RGATCY	4 cut(s)	189, 1664, 2113, 3196
MhlI	GDGCHC	3 cut(s)	597, 1115, 2731
MlsI	TGGCCA	3 cut(s)	36, 2549, 3157
MluNI	TGGCCA	3 cut(s)	36, 2549, 3157
MlyI	GAGTC	5 cut(s)	326, 974, 1553, 2050, 2157
MmeI	TCCRAC	2 cut(s)	193, 862
Mox20I	TGGCCA	3 cut(s)	36, 2549, 3157
Mph1103I	ATGCAT	1 cut(s)	1997
MroXI	GAANNNNTTC	3 cut(s)	16, 1019, 2996
MscI	TGGCCA	3 cut(s)	36, 2549, 3157
MseI	TTAA	7 cut(s)	870, 900, 1788, 2372, 2619, 2678, 2958
MslI	CAYNNNNRTG	4 cut(s)	1352, 1847, 2177, 2336
Msp20I	TGGCCA	3 cut(s)	36, 2549, 3157
MspA1I	CMGCKG	4 cut(s)	40, 241, 2663, 2906
MspI	CCGG	2 cut(s)	978, 1683
MspR9I	CCNGG	5 cut(s)	519, 979, 1759, 2127, 2879
MunI	CAATTG	1 cut(s)	1179
Mva1269I	GAATGC	3 cut(s)	1068, 1321, 2319
MvaI	CCWGG	4 cut(s)	519, 1759, 2127, 2879
MvnI	CGCG	1 cut(s)	549
MwoI	GCNNNNNNNGC	7 cut(s)	104, 113, 546, 1043, 1992, 2089, 2660
NciI	CCSGG	1 cut(s)	979
NcoI	CCATGG	1 cut(s)	2472
NdeII	GATC	8 cut(s)	189, 910, 1432, 1664, 2085, 2113, 2865, 3196
NlaIV	GGNNCC	3 cut(s)	1666, 2281, 3198
NmeAIII	GCCGAG	1 cut(s)	1135
NmuCI	GTSAC	6 cut(s)	1069, 1345, 1390, 2413, 2899, 3222
NsiI	ATGCAT	1 cut(s)	1997
NspI	RCATGY	1 cut(s)	1890
NspV	TTCGAA	1 cut(s)	2290
OliI	CACNNNNGTG	1 cut(s)	1352
PagI	TCATGA	1 cut(s)	361
PaqCI	CACCTGC	2 cut(s)	2153, 2449
PceI	AGGCCT	1 cut(s)	1194
PciSI	GCTCTTC	1 cut(s)	602
PctI	GAATGC	3 cut(s)	1068, 1321, 2319
PdmI	GAANNNNTTC	3 cut(s)	16, 1019, 2996
PflMI	CCANNNNNTGG	1 cut(s)	1972
PleI	GAGTC	5 cut(s)	325, 973, 1553, 2050, 2156
PpsI	GAGTC	5 cut(s)	325, 973, 1553, 2050, 2156
PpuMI	RGGWCCY	1 cut(s)	2349
PsiI	TTATAA	2 cut(s)	1820, 2580
Psp124BI	GAGCTC	1 cut(s)	1115
Psp5II	RGGWCCY	1 cut(s)	2349
Psp6I	CCWGG	4 cut(s)	517, 1757, 2125, 2877
PspEI	GGTNACC	1 cut(s)	513
PspFI	CCCAGC	1 cut(s)	2092
PspGI	CCWGG	4 cut(s)	517, 1757, 2125, 2877
PspN4I	GGNNCC	3 cut(s)	1666, 2281, 3198
PspPI	GGNCC	2 cut(s)	2349, 2785
PspPPI	RGGWCCY	1 cut(s)	2349
PsrI	GAACNNNNNNTAC	2 cut(s)	3036, 3068
PstI	CTGCAG	3 cut(s)	925, 1345, 2164
PstNI	CAGNNNCTG	1 cut(s)	2417
PsuI	RGATCY	4 cut(s)	189, 1664, 2113, 3196
PvuII	CAGCTG	2 cut(s)	40, 2663
RsaI	GTAC	4 cut(s)	2379, 2428, 2943, 3183
RsaNI	GTAC	4 cut(s)	2378, 2427, 2942, 3182
RseI	CAYNNNNRTG	4 cut(s)	1352, 1847, 2177, 2336
SacI	GAGCTC	1 cut(s)	1115
SalI	GTCGAC	1 cut(s)	2121
SapI	GCTCTTC	1 cut(s)	602
SaqAI	TTAA	7 cut(s)	870, 900, 1788, 2372, 2619, 2678, 2958
Sau3AI	GATC	8 cut(s)	189, 910, 1432, 1664, 2085, 2113, 2865, 3196
Sau96I	GGNCC	2 cut(s)	2349, 2785
SchI	GAGTC	5 cut(s)	326, 974, 1553, 2050, 2157
ScrFI	CCNGG	5 cut(s)	519, 979, 1759, 2127, 2879
SduI	GDGCHC	3 cut(s)	597, 1115, 2731
SfaNI	GCATC	5 cut(s)	732, 1982, 2128, 2425, 3152
SfcI	CTRYAG	6 cut(s)	921, 1341, 1350, 2160, 2214, 2220
SfuI	TTCGAA	1 cut(s)	2290
SinI	GGWCC	1 cut(s)	2349
SmiMI	CAYNNNNRTG	4 cut(s)	1352, 1847, 2177, 2336
SmlI	CTYRAG	3 cut(s)	269, 1891, 2835
SmoI	CTYRAG	3 cut(s)	269, 1891, 2835
SseBI	AGGCCT	1 cut(s)	1194
SspI	AATATT	2 cut(s)	2197, 2812
SspMI	CTAG	9 cut(s)	452, 1160, 1220, 1403, 1980, 2256, 2633, 2723, 2831
SstI	GAGCTC	1 cut(s)	1115
StuI	AGGCCT	1 cut(s)	1194
StyD4I	CCNGG	5 cut(s)	517, 977, 1757, 2125, 2877
StyI	CCWWGG	4 cut(s)	1926, 1966, 2472, 2482
TaaI	ACNGT	9 cut(s)	801, 929, 1486, 1918, 2042, 2382, 2554, 2617, 3024
TaiI	ACGT	1 cut(s)	345
TaqI	TCGA	6 cut(s)	792, 838, 2122, 2136, 2290, 2361
TatI	WGTACW	1 cut(s)	2941
TauI	GCSGC	4 cut(s)	549, 583, 659, 2790
Tru1I	TTAA	7 cut(s)	870, 900, 1788, 2372, 2619, 2678, 2958
Tru9I	TTAA	7 cut(s)	870, 900, 1788, 2372, 2619, 2678, 2958
TscAI	CASTG	9 cut(s)	303, 1096, 1249, 1389, 1501, 2047, 2305, 2387, 2422
TseFI	GTSAC	6 cut(s)	1069, 1345, 1390, 2413, 2899, 3222
Tsp45I	GTSAC	6 cut(s)	1069, 1345, 1390, 2413, 2899, 3222
TspGWI	ACGGA	1 cut(s)	2324
TspRI	CASTG	9 cut(s)	303, 1096, 1249, 1389, 1501, 2047, 2305, 2387, 2422
Van91I	CCANNNNNTGG	1 cut(s)	1972
VpaK11BI	GGWCC	1 cut(s)	2349
XagI	CCTNNNNNAGG	2 cut(s)	588, 1659
XapI	RAATTY	4 cut(s)	16, 2016, 2285, 2594
XceI	RCATGY	1 cut(s)	1890
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2258
XmiI	GTMKAC	1 cut(s)	2122
XmnI	GAANNNNTTC	3 cut(s)	16, 1019, 2996
XspI	CTAG	9 cut(s)	452, 1160, 1220, 1403, 1980, 2256, 2633, 2723, 2831
Zsp2I	ATGCAT	1 cut(s)	1997

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.