Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0014891

Physical Location & Seq

Genomic Coordinates Reverse (-)

17080627 .. 17083883

Gene Structure 3257 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00177520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2844 bp

ATGGTGAGCAGCAAGAATTCACCTTATGATTGTGGCCAGTTGATAGTTGACATCACCACTACCACTTTCACCAGAGCGAAGAAGAGGTGGCGCATGGCGTATGCTGCCTTGTATGCTGTAAGGGTGATGCTATCACTTCCCAAAGAGCTTATGTACAAGAGGAGCAACTACAAGGACTACTCTGAGATCATCGAGTATGGATCTTTCGGTGGTTTCCAAGGTCTCAAAGAAAGCCGGCGGGAGAAGGGAGATTCAAACTCTGGTCTCGAGCATGAGGCTAAAAGCTCTTCACCACTGGAGCTACAATCCCCTGCACACGATGAGTCTCGTTCTTACACTTCCCTGGAGGTGAAACCAAGCACTTCCCCTGATGAAACTGGTCACTATAGTTCTGTCCCCAACAACATTGACCATGCAGGGCTCGAAAAAATGGTGAAGGAAAAAGACTCGGCTGCTCTTGGAAAGTTAGGAGGAGTTGCTGGCATAACCACTTCTCTTAAAACAAATATTGAGTATGGGCTACCTGGCGACGACGCAGAAATCAACAAACGCCGTGTACTATTCGGCTCAAATACATACCCAAAGCCGCCTTCAAAAGGGCTCCTCTATTTTGTGCTGGACGCTCTGAAAGACATGACGATTCTGATTCTATGTGTCTGTGCAGCACTTTCTCTTGCATTTGGAATCAAAGAGTATGGAGTAGAGGAAGGCTGGTATGAAGGTGGAAGTATCTTTGTAGCTGTAATCATTGTCATTGTTGTCTCAGCTCTCAGTAACTTCAGACAGGAAATCCAATTCGACAAACTGTCTAAAATAAGCAGCAACATCAACGTTGAGGTATTTAGAGACAGACAAAGACGAGAAATCTCCATCTTTGATGTTGTGGTTGGAGATGTCGTCTTCCTTAACATTGGAGATCAAATTCCTGCAGATGGGGTGTTCTTAGATGGCTATTCATTTCAAGTGGACGAGTCCAGCATGACCGGGGAGAGCGACTATGTAGAAGTTGATTCCAGAAAGAATCCCTTCCTCTTGTCTGGTGCAAAGGTGGCTGATGGTTATGGTAGAATGCTTGTCACATCAGTTGGGATGAACACTGCTTGGGGCGAAATGATGAGCTCAATTTCGCAGGAATCAAATGTAAGAACTCCATTACAAGCTCGGCTTGACAAACTTACCTCTTCTATTGGAAAGGTAGGCCTTGCAGTTGCTTTCTTAGTTCTTCTAGTTTTGTTGATTCGTTATTTCACTGGCAATACAAAAGATAAGAATGGCAATAAGGAGTATATTGGTAGCAAAACAAAAACAGATGATGTGTTGAATGCAATAGTACGGATTGTATCTGCTGCAGTTACTATTGTGGTGGTGGCAATCCCTGAAGGCTTGCCACTGGCTGTCACACTAACACTTGCTTACTCTATGAAAAGAATGATGAAAGATCACGCAATGGTTAGAAAACTATCGGCTTGTGAGACAATGGGACAAGAAACGAAGTGGGGTTCTTATAAAGAAAAAGATGATAGCACCGTCCACGTGCACTGGAAAGGAGCTGCTGAGATGATAGTTGCAACATGCTCGAGTTATTATGATACCAATGGAACTGCAAAGCCCTTGGATGTCGATACAAGGTCTAAAGTTGAGAAAATAATCCAAGGCATGGCAGCTAGTAGCCTCCGATGCATTGCTTTCGCTCATGCCCAAATTTCAGAGGAAGAAGTTGAATACAGTGATGATGACAAGAAGCACCAAAAGCTCAAAGAAGATGGGCTGATCTTGCTAGGGATAGTCGGCCTCAAAGATCCATGTCGACCAGGGGTCGTCCATGCTGTGGGAGTTTGCAAGGATGCGGGTGTGGACATCAAAATGATAACTGGAGACAATATTTTCACAGCAAAAGCTATAGCTACAGAATGTGGAATACTAAAGAATGAGAACGAGGTAAAGGATGGACAAGTTGTAGAAGGAGTCGAATTTCGAAACTACACTGATGCAGAGAGAATGCAGAAGGTTGATAACATCCGTGTGATGGCAAGGTCCTCTCCATTTGACAAGCTTCTAATGGTACAGTGTTTGAAGGAGAAAGGTCATGTGGTTGCAGTCACTGGTGATGGTACGAATGATGCACCTGCATTGAAAGAAGCTGATATAGGACTTTCCATGGGCATCCAAGGAACTGAAGTGGCAAAAGAAAGCTCGGATATCATCATCTTGGATGACAACTTCAATTCTGTGGCCACAGTTTTGAGATGGGGGAGATGTGTTTATAACAATATACAGAAATTCATCCAATTTCAACTAACTGTTAATGTTGCAGCTCTAGTAATCAACTTTATTGCAGCAGTTTCAGCTGGTGAAGTTCCCCTAACAGCAGTTCAATTACTTTGGGTGAATCTCATCATGGACACGCTAGGTGCTCTGGCTCTTGCTACGGAGCGGCCAACTAATGAGCTAATGGAGAGGCAGCCTTTCCAGGGTGAGTCTATATTCAATGTCACTGCTGCGGTGAATGATACTCTGATATTCAATACCTTTGTATTATGCCAAGTTTTCAACGAGTTCAATTCAAGAAGCATGGAGAAGAAGAATGTATTCAAAGGTATTCTCAGGAATAGGCTGTTTATTGGGATTGTGGGGATAACTATTGTTCTTCAGGTTGTGATGGTGGAGTTTCTGAAGAAATTTGCAGATACAGAAAAGTTGAATGTTCAGCAATGGGTAGTTTGTATAGTGATTGCAGCTGTATCATGGCCAATTGGTTGGGCTGTGAAGTTCATACCTGTTTCAGAGGACCCATACTTCAGAATTATCAAAAGGTCACTCCTCAGATTAAAAAGCATTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

947

Amino Acids

104.4

Weight (kDa)

6.04

Isoelectric Point (pI)

34.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	157 - 224	8.2e-12	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	277 - 375	2e-21	P-type ATPase actuator domain
Cation_ATPase	PF13246	505 - 604	2.2e-19	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	574 - 715	6.8e-12	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	786 - 831	1.7e-13	Cation transporting ATPase, C-terminus
Cation_ATPase_C	PF00689	838 - 925	1.7e-19	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0014891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63380
fragaria_vesca	FvH4_2g22900
malus_domestica	MD11G1278100.v1.1
prunus_persica	Prupe.8G234200_v2.0.a1 Prupe.8G234200_v2.0.a1
pyrus_communis	pycom11g24580
rosa_chinensis	RchiOBHm_Chr6g0289831
rosa_laevigata	RLG00000012264
rosa_multiflora	Rmu_sc0032573.1_g000001 Rmu_ssc0000314.1_g000015
rosa_roxburghii	Rroxscaffold_4G00321460 Rroxscaffold_7G00177520 Rroxscaffold_7G00178050
rosa_rugosa	Rorug06G0207300
rosa_samantha	Rh6AG318800
rosa_wichuraiana	Rw6G027500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1506, 2265
AarI	CACCTGC	1 cut(s)	2134
Acc36I	ACCTGC	1 cut(s)	2134
AccB7I	CCANNNNNTGG	2 cut(s)	1657, 1828
AccBSI	CCGCTC	1 cut(s)	2434
AccI	GTMKAC	1 cut(s)	1807
AciI	CCGC	5 cut(s)	238, 587, 1847, 2434, 2501
AclI	AACGTT	1 cut(s)	831
AclWI	GGATC	2 cut(s)	208, 1793
AcoI	YGGCCR	4 cut(s)	34, 2232, 2435, 2747
AcsI	RAATTY	6 cut(s)	16, 921, 1701, 1970, 2279, 2678
AcuI	CTGAAG	6 cut(s)	763, 1398, 2196, 2633, 2693, 2782
AcvI	CACGTG	1 cut(s)	1534
AfaI	GTAC	5 cut(s)	155, 558, 1332, 2064, 2113
AfiI	CCNNNNNNNGG	6 cut(s)	596, 932, 1657, 1828, 2026, 2471
AhdI	GACNNNNNGTC	2 cut(s)	805, 1814
AjnI	CCWGG	4 cut(s)	342, 523, 1810, 2469
AjuI	GAANNNNNNNTTGG	2 cut(s)	574, 606
Alw21I	GWGCWC	3 cut(s)	1121, 1539, 2416
Alw26I	GTCTC	7 cut(s)	227, 269, 330, 766, 840, 1466, 1869
Alw44I	GTGCAC	1 cut(s)	1535
AlwI	GGATC	2 cut(s)	208, 1793
AlwNI	CAGNNNCTG	1 cut(s)	2102
Ama87I	CYCGRG	2 cut(s)	266, 1576
AoxI	GGCC	6 cut(s)	34, 1198, 1789, 2232, 2435, 2747
ApaLI	GTGCAC	1 cut(s)	1535
ApoI	RAATTY	6 cut(s)	16, 921, 1701, 1970, 2279, 2678
Asp700I	GAANNNNTTC	2 cut(s)	1025, 2588
AspLEI	GCGC	1 cut(s)	93
AspS9I	GGNCC	2 cut(s)	2034, 2788
AsuC2I	CCSGG	1 cut(s)	985
AsuII	TTCGAA	1 cut(s)	1975
AvaI	CYCGRG	2 cut(s)	266, 1576
AvaII	GGWCC	2 cut(s)	2034, 2788
BaeGI	GKGCMC	1 cut(s)	1539
BalI	TGGCCA	3 cut(s)	36, 2234, 2749
BanII	GRGCYC	3 cut(s)	423, 603, 1121
BbrPI	CACGTG	1 cut(s)	1534
BbsI	GAAGAC	1 cut(s)	892
Bbv12I	GWGCWC	3 cut(s)	1121, 1539, 2416
BceAI	ACGGC	1 cut(s)	537
BcgI	CGANNNNNNTGC	4 cut(s)	1557, 1591, 1669, 1703
BciT130I	CCWGG	4 cut(s)	344, 525, 1812, 2471
BcnI	CCSGG	1 cut(s)	985
BcoDI	GTCTC	7 cut(s)	227, 269, 330, 766, 840, 1466, 1869
BfaI	CTAG	5 cut(s)	1226, 1665, 1778, 2318, 2408
BfmI	CTRYAG	5 cut(s)	385, 927, 1347, 1899, 1905
BfuAI	ACCTGC	1 cut(s)	2134
Bme1390I	CCNGG	5 cut(s)	344, 525, 985, 1812, 2471
Bme18I	GGWCC	2 cut(s)	2034, 2788
BmeRI	GACNNNNNGTC	2 cut(s)	805, 1814
BmeT110I	CYCGRG	2 cut(s)	266, 1576
BmgT120I	GGNCC	2 cut(s)	2034, 2788
BmiI	GGNNCC	2 cut(s)	602, 2790
BmrFI	CCNGG	5 cut(s)	344, 525, 985, 1812, 2471
BmsI	GCATC	6 cut(s)	117, 1667, 1834, 1978, 2110, 2172
BpiI	GAAGAC	1 cut(s)	892
BpmI	CTGGAG	3 cut(s)	317, 365, 1893
Bpu14I	TTCGAA	1 cut(s)	1975
BpuMI	CCSGG	1 cut(s)	985
BsaAI	YACGTR	1 cut(s)	1534
BsaI	GGTCTC	2 cut(s)	227, 269
BsaJI	CCNNGG	9 cut(s)	217, 342, 984, 1611, 1651, 1811, 2157, 2167, 2470
BsaXI	ACNNNNNCTCC	2 cut(s)	882, 912
Bsc4I	CCNNNNNNNGG	6 cut(s)	596, 932, 1657, 1828, 2026, 2471
Bse118I	RCCGGY	1 cut(s)	234
Bse1I	ACTGG	8 cut(s)	37, 300, 382, 1255, 1395, 1544, 1876, 2107
Bse3DI	GCAATG	3 cut(s)	1452, 1680, 2717
BseBI	CCWGG	4 cut(s)	344, 525, 1812, 2471
BseDI	CCNNGG	9 cut(s)	217, 342, 984, 1611, 1651, 1811, 2157, 2167, 2470
BseGI	GGATG	8 cut(s)	1095, 1621, 1849, 1951, 2016, 2163, 2218, 2283
BseLI	CCNNNNNNNGG	6 cut(s)	596, 932, 1657, 1828, 2026, 2471
BseMI	GCAATG	3 cut(s)	1452, 1680, 2717
BseMII	CTCAG	6 cut(s)	174, 777, 784, 1545, 2617, 2836
BseNI	ACTGG	8 cut(s)	37, 300, 382, 1255, 1395, 1544, 1876, 2107
BseRI	GAGGAG	4 cut(s)	175, 486, 593, 2810
BseSI	GKGCMC	1 cut(s)	1539
BsgI	GTGCAG	2 cut(s)	297, 681
BshFI	GGCC	6 cut(s)	36, 1200, 1791, 2234, 2437, 2749
BsiHKAI	GWGCWC	3 cut(s)	1121, 1539, 2416
BsiHKCI	CYCGRG	2 cut(s)	266, 1576
BsiSI	CCGG	2 cut(s)	235, 984
BslFI	GGGAC	2 cut(s)	380, 1494
BslI	CCNNNNNNNGG	6 cut(s)	596, 932, 1657, 1828, 2026, 2471
BsmAI	GTCTC	7 cut(s)	227, 269, 330, 766, 840, 1466, 1869
BsmFI	GGGAC	2 cut(s)	380, 1494
BsmI	GAATGC	3 cut(s)	1074, 1327, 2004
BsnI	GGCC	6 cut(s)	36, 1200, 1791, 2234, 2437, 2749
Bso31I	GGTCTC	2 cut(s)	227, 269
BsoBI	CYCGRG	2 cut(s)	266, 1576
Bsp119I	TTCGAA	1 cut(s)	1975
Bsp1286I	GDGCHC	5 cut(s)	423, 603, 1121, 1539, 2416
Bsp1407I	TGTACA	1 cut(s)	153
Bsp143I	GATC	6 cut(s)	186, 200, 916, 1438, 1770, 1798
Bsp19I	CCATGG	1 cut(s)	2157
BspACI	CCGC	5 cut(s)	238, 587, 1847, 2434, 2501
BspANI	GGCC	6 cut(s)	36, 1200, 1791, 2234, 2437, 2749
BspCNI	CTCAG	6 cut(s)	175, 776, 783, 1546, 2616, 2835
BspLI	GGNNCC	2 cut(s)	602, 2790
BspMAI	CTGCAG	2 cut(s)	931, 1351
BspMI	ACCTGC	1 cut(s)	2134
BspPI	GGATC	2 cut(s)	208, 1793
BspQI	GCTCTTC	1 cut(s)	292
BspT104I	TTCGAA	1 cut(s)	1975
BspTNI	GGTCTC	2 cut(s)	227, 269
BsrBI	CCGCTC	1 cut(s)	2434
BsrDI	GCAATG	3 cut(s)	1452, 1680, 2717
BsrFI	RCCGGY	1 cut(s)	234
BsrGI	TGTACA	1 cut(s)	153
BsrI	ACTGG	8 cut(s)	37, 300, 382, 1255, 1395, 1544, 1876, 2107
BssAI	RCCGGY	1 cut(s)	234
BssECI	CCNNGG	9 cut(s)	217, 342, 984, 1611, 1651, 1811, 2157, 2167, 2470
BssMI	GATC	6 cut(s)	186, 200, 916, 1438, 1770, 1798
BssT1I	CCWWGG	5 cut(s)	217, 1611, 1651, 2157, 2167
Bst2UI	CCWGG	4 cut(s)	344, 525, 1812, 2471
Bst4CI	ACNGT	6 cut(s)	807, 1528, 1727, 2067, 2239, 2302
Bst6I	CTCTTC	3 cut(s)	77, 292, 1186
BstAUI	TGTACA	1 cut(s)	153
BstBAI	YACGTR	1 cut(s)	1534
BstBI	TTCGAA	1 cut(s)	1975
BstC8I	GCNNGC	3 cut(s)	236, 481, 1385
BstDEI	CTNAG	8 cut(s)	183, 763, 770, 943, 1216, 1554, 2603, 2822
BstDSI	CCRYGG	1 cut(s)	2157
BstENI	CCTNNNNNAGG	1 cut(s)	594
BstF5I	GGATG	8 cut(s)	1095, 1621, 1849, 1951, 2016, 2163, 2218, 2283
BstHHI	GCGC	1 cut(s)	93
BstKTI	GATC	6 cut(s)	189, 203, 919, 1441, 1773, 1801
BstMAI	GTCTC	7 cut(s)	227, 269, 330, 766, 840, 1466, 1869
BstMBI	GATC	6 cut(s)	186, 200, 916, 1438, 1770, 1798
BstMWI	GCNNNNNNNGC	7 cut(s)	104, 113, 1049, 1677, 1750, 1774, 2345
BstNI	CCWGG	4 cut(s)	344, 525, 1812, 2471
BstNSI	RCATGY	1 cut(s)	1575
BstSCI	CCNGG	5 cut(s)	342, 523, 983, 1810, 2469
BstSFI	CTRYAG	5 cut(s)	385, 927, 1347, 1899, 1905
BstSLI	GKGCMC	1 cut(s)	1539
BstV2I	GAAGAC	1 cut(s)	892
BstX2I	RGATCY	2 cut(s)	200, 1798
BstXI	CCANNNNNNTGG	1 cut(s)	2757
BstYI	RGATCY	2 cut(s)	200, 1798
BsuRI	GGCC	6 cut(s)	36, 1200, 1791, 2234, 2437, 2749
BtgI	CCRYGG	1 cut(s)	2157
BtsCI	GGATG	8 cut(s)	1095, 1621, 1849, 1951, 2016, 2163, 2218, 2283
BtsI	GCAGTG	2 cut(s)	1095, 2493
BveI	ACCTGC	1 cut(s)	2134
Cac8I	GCNNGC	3 cut(s)	236, 481, 1385
CaiI	CAGNNNCTG	1 cut(s)	2102
CfoI	GCGC	1 cut(s)	93
Cfr10I	RCCGGY	1 cut(s)	234
Cfr13I	GGNCC	2 cut(s)	2034, 2788
CseI	GACGC	2 cut(s)	542, 629
Csp6I	GTAC	5 cut(s)	154, 557, 1331, 2063, 2112
CviQI	GTAC	5 cut(s)	154, 557, 1331, 2063, 2112
DdeI	CTNAG	8 cut(s)	183, 763, 770, 943, 1216, 1554, 2603, 2822
DpnI	GATC	6 cut(s)	188, 202, 918, 1440, 1772, 1800
DpnII	GATC	6 cut(s)	186, 200, 916, 1438, 1770, 1798
DriI	GACNNNNNGTC	2 cut(s)	805, 1814
EaeI	YGGCCR	4 cut(s)	34, 2232, 2435, 2747
Eam1104I	CTCTTC	3 cut(s)	77, 292, 1186
Eam1105I	GACNNNNNGTC	2 cut(s)	805, 1814
EarI	CTCTTC	3 cut(s)	77, 292, 1186
Ecl136II	GAGCTC	1 cut(s)	1119
Eco130I	CCWWGG	5 cut(s)	217, 1611, 1651, 2157, 2167
Eco147I	AGGCCT	1 cut(s)	1200
Eco24I	GRGCYC	3 cut(s)	423, 603, 1121
Eco31I	GGTCTC	2 cut(s)	227, 269
Eco32I	GATATC	1 cut(s)	2200
Eco47I	GGWCC	2 cut(s)	2034, 2788
Eco53kI	GAGCTC	1 cut(s)	1119
Eco57I	CTGAAG	6 cut(s)	763, 1398, 2196, 2633, 2693, 2782
Eco72I	CACGTG	1 cut(s)	1534
Eco88I	CYCGRG	2 cut(s)	266, 1576
EcoICRI	GAGCTC	1 cut(s)	1119
EcoNI	CCTNNNNNAGG	1 cut(s)	594
EcoO109I	RGGNCCY	2 cut(s)	2034, 2788
EcoRI	GAATTC	1 cut(s)	16
EcoRII	CCWGG	4 cut(s)	342, 523, 1810, 2469
EcoRV	GATATC	1 cut(s)	2200
EcoT14I	CCWWGG	5 cut(s)	217, 1611, 1651, 2157, 2167
EcoT22I	ATGCAT	1 cut(s)	1682
EcoT38I	GRGCYC	3 cut(s)	423, 603, 1121
ErhI	CCWWGG	5 cut(s)	217, 1611, 1651, 2157, 2167
FalI	AAGNNNNNCTT	4 cut(s)	1010, 1042, 1149, 1181
FaqI	GGGAC	2 cut(s)	380, 1494
FauI	CCCGC	2 cut(s)	231, 1840
FblI	GTMKAC	1 cut(s)	1807
FokI	GGATG	8 cut(s)	1102, 1628, 1856, 1958, 2003, 2150, 2225, 2270
FriOI	GRGCYC	3 cut(s)	423, 603, 1121
FspBI	CTAG	5 cut(s)	1226, 1665, 1778, 2318, 2408
GlaI	GCGC	1 cut(s)	92
GsuI	CTGGAG	3 cut(s)	317, 365, 1893
HaeIII	GGCC	6 cut(s)	36, 1200, 1791, 2234, 2437, 2749
HapII	CCGG	2 cut(s)	235, 984
HgaI	GACGC	2 cut(s)	542, 629
HhaI	GCGC	1 cut(s)	93
Hin6I	GCGC	1 cut(s)	91
HinP1I	GCGC	1 cut(s)	91
HincII	GTYRAC	2 cut(s)	49, 1808
HindII	GTYRAC	2 cut(s)	49, 1808
HindIII	AAGCTT	1 cut(s)	2051
HpaII	CCGG	2 cut(s)	235, 984
Hpy166II	GTNNAC	7 cut(s)	49, 557, 967, 1531, 1537, 1808, 1855
Hpy188III	TCNNGA	4 cut(s)	266, 1014, 2565, 2605
Hpy8I	GTNNAC	7 cut(s)	49, 557, 967, 1531, 1537, 1808, 1855
Hpy99I	CGWCG	2 cut(s)	533, 536
HpyCH4III	ACNGT	6 cut(s)	807, 1528, 1727, 2067, 2239, 2302
HpyCH4IV	ACGT	2 cut(s)	831, 1533
HpyF10VI	GCNNNNNNNGC	7 cut(s)	104, 113, 1049, 1677, 1750, 1774, 2345
HpyF3I	CTNAG	8 cut(s)	183, 763, 770, 943, 1216, 1554, 2603, 2822
HpySE526I	ACGT	2 cut(s)	831, 1533
HspAI	GCGC	1 cut(s)	91
KroI	GCCGGC	1 cut(s)	234
KroNI	GCCGGC	1 cut(s)	236
Kzo9I	GATC	6 cut(s)	186, 200, 916, 1438, 1770, 1798
LguI	GCTCTTC	1 cut(s)	292
LmnI	GCTCC	5 cut(s)	162, 298, 606, 1547, 2431
LweI	GCATC	6 cut(s)	117, 1667, 1834, 1978, 2110, 2172
MaeI	CTAG	5 cut(s)	1226, 1665, 1778, 2318, 2408
MaeII	ACGT	2 cut(s)	831, 1533
MaeIII	GTNAC	8 cut(s)	380, 773, 1075, 1351, 1396, 2098, 2491, 2814
MalI	GATC	6 cut(s)	188, 202, 918, 1440, 1772, 1800
MbiI	CCGCTC	1 cut(s)	2434
MboI	GATC	6 cut(s)	186, 200, 916, 1438, 1770, 1798
MfeI	CAATTG	1 cut(s)	2751
MflI	RGATCY	2 cut(s)	200, 1798
MhlI	GDGCHC	5 cut(s)	423, 603, 1121, 1539, 2416
MlsI	TGGCCA	3 cut(s)	36, 2234, 2749
MluNI	TGGCCA	3 cut(s)	36, 2234, 2749
MlyI	GAGTC	5 cut(s)	332, 440, 980, 1974, 2486
MmeI	TCCRAC	1 cut(s)	868
Mox20I	TGGCCA	3 cut(s)	36, 2234, 2749
Mph1103I	ATGCAT	1 cut(s)	1682
MroNI	GCCGGC	1 cut(s)	234
MroXI	GAANNNNTTC	2 cut(s)	1025, 2588
MscI	TGGCCA	3 cut(s)	36, 2234, 2749
MseI	TTAA	4 cut(s)	498, 906, 2304, 2828
MslI	CAYNNNNRTG	2 cut(s)	1862, 2021
Msp20I	TGGCCA	3 cut(s)	36, 2234, 2749
MspA1I	CMGCKG	2 cut(s)	2348, 2738
MspI	CCGG	2 cut(s)	235, 984
MspR9I	CCNGG	5 cut(s)	344, 525, 985, 1812, 2471
MunI	CAATTG	1 cut(s)	2751
Mva1269I	GAATGC	3 cut(s)	1074, 1327, 2004
MvaI	CCWGG	4 cut(s)	344, 525, 1812, 2471
MwoI	GCNNNNNNNGC	7 cut(s)	104, 113, 1049, 1677, 1750, 1774, 2345
NaeI	GCCGGC	1 cut(s)	236
NciI	CCSGG	1 cut(s)	985
NcoI	CCATGG	1 cut(s)	2157
NdeII	GATC	6 cut(s)	186, 200, 916, 1438, 1770, 1798
NgoMIV	GCCGGC	1 cut(s)	234
NlaIV	GGNNCC	2 cut(s)	602, 2790
NmeAIII	GCCGAG	2 cut(s)	428, 1141
NmuCI	GTSAC	6 cut(s)	380, 1075, 1396, 2098, 2491, 2814
NsiI	ATGCAT	1 cut(s)	1682
NspI	RCATGY	1 cut(s)	1575
NspV	TTCGAA	1 cut(s)	1975
PaeR7I	CTCGAG	2 cut(s)	266, 1576
PaqCI	CACCTGC	1 cut(s)	2134
PceI	AGGCCT	1 cut(s)	1200
PciSI	GCTCTTC	1 cut(s)	292
PctI	GAATGC	3 cut(s)	1074, 1327, 2004
PdiI	GCCGGC	1 cut(s)	236
PdmI	GAANNNNTTC	2 cut(s)	1025, 2588
PfeI	GAWTC	9 cut(s)	251, 640, 646, 684, 1010, 1021, 1133, 1237, 2389
PflMI	CCANNNNNTGG	2 cut(s)	1657, 1828
PleI	GAGTC	5 cut(s)	331, 440, 979, 1973, 2485
PmaCI	CACGTG	1 cut(s)	1534
PmlI	CACGTG	1 cut(s)	1534
PpsI	GAGTC	5 cut(s)	331, 440, 979, 1973, 2485
Ppu21I	YACGTR	1 cut(s)	1534
PpuMI	RGGWCCY	2 cut(s)	2034, 2788
PsiI	TTATAA	2 cut(s)	1506, 2265
Psp124BI	GAGCTC	1 cut(s)	1121
Psp1406I	AACGTT	1 cut(s)	831
Psp5II	RGGWCCY	2 cut(s)	2034, 2788
Psp6I	CCWGG	4 cut(s)	342, 523, 1810, 2469
PspCI	CACGTG	1 cut(s)	1534
PspGI	CCWGG	4 cut(s)	342, 523, 1810, 2469
PspN4I	GGNNCC	2 cut(s)	602, 2790
PspPI	GGNCC	2 cut(s)	2034, 2788
PspPPI	RGGWCCY	2 cut(s)	2034, 2788
PspXI	VCTCGAGB	1 cut(s)	1576
PstI	CTGCAG	2 cut(s)	931, 1351
PstNI	CAGNNNCTG	1 cut(s)	2102
PsuI	RGATCY	2 cut(s)	200, 1798
PvuII	CAGCTG	2 cut(s)	2348, 2738
RsaI	GTAC	5 cut(s)	155, 558, 1332, 2064, 2113
RsaNI	GTAC	5 cut(s)	154, 557, 1331, 2063, 2112
RseI	CAYNNNNRTG	2 cut(s)	1862, 2021
SacI	GAGCTC	1 cut(s)	1121
SalI	GTCGAC	1 cut(s)	1806
SapI	GCTCTTC	1 cut(s)	292
SaqAI	TTAA	4 cut(s)	498, 906, 2304, 2828
Sau3AI	GATC	6 cut(s)	186, 200, 916, 1438, 1770, 1798
Sau96I	GGNCC	2 cut(s)	2034, 2788
SchI	GAGTC	5 cut(s)	332, 440, 980, 1974, 2486
ScrFI	CCNGG	5 cut(s)	344, 525, 985, 1812, 2471
SduI	GDGCHC	5 cut(s)	423, 603, 1121, 1539, 2416
SfaNI	GCATC	6 cut(s)	117, 1667, 1834, 1978, 2110, 2172
SfcI	CTRYAG	5 cut(s)	385, 927, 1347, 1899, 1905
Sfr274I	CTCGAG	2 cut(s)	266, 1576
SfuI	TTCGAA	1 cut(s)	1975
SinI	GGWCC	2 cut(s)	2034, 2788
SlaI	CTCGAG	2 cut(s)	266, 1576
SmiMI	CAYNNNNRTG	2 cut(s)	1862, 2021
SmlI	CTYRAG	2 cut(s)	266, 1576
SmoI	CTYRAG	2 cut(s)	266, 1576
SseBI	AGGCCT	1 cut(s)	1200
SsiI	CCGC	5 cut(s)	238, 587, 1847, 2434, 2501
SspI	AATATT	2 cut(s)	508, 1882
SspMI	CTAG	5 cut(s)	1226, 1665, 1778, 2318, 2408
SstI	GAGCTC	1 cut(s)	1121
StuI	AGGCCT	1 cut(s)	1200
StyD4I	CCNGG	5 cut(s)	342, 523, 983, 1810, 2469
StyI	CCWWGG	5 cut(s)	217, 1611, 1651, 2157, 2167
TaaI	ACNGT	6 cut(s)	807, 1528, 1727, 2067, 2239, 2302
TaiI	ACGT	2 cut(s)	834, 1536
TaqI	TCGA	9 cut(s)	192, 267, 423, 798, 1577, 1620, 1807, 1968, 1975
TatI	WGTACW	2 cut(s)	153, 556
TauI	GCSGC	2 cut(s)	589, 2437
TfiI	GAWTC	9 cut(s)	251, 640, 646, 684, 1010, 1021, 1133, 1237, 2389
Tru1I	TTAA	4 cut(s)	498, 906, 2304, 2828
Tru9I	TTAA	4 cut(s)	498, 906, 2304, 2828
TseFI	GTSAC	6 cut(s)	380, 1075, 1396, 2098, 2491, 2814
Tsp45I	GTSAC	6 cut(s)	380, 1075, 1396, 2098, 2491, 2814
TspDTI	ATGAA	8 cut(s)	387, 732, 945, 1106, 1436, 1448, 2272, 2761
TspGWI	ACGGA	3 cut(s)	1348, 2009, 2444
Van91I	CCANNNNNTGG	2 cut(s)	1657, 1828
VneI	GTGCAC	1 cut(s)	1535
VpaK11BI	GGWCC	2 cut(s)	2034, 2788
XagI	CCTNNNNNAGG	1 cut(s)	594
XapI	RAATTY	6 cut(s)	16, 921, 1701, 1970, 2279, 2678
XceI	RCATGY	1 cut(s)	1575
XhoI	CTCGAG	2 cut(s)	266, 1576
XmiI	GTMKAC	1 cut(s)	1807
XmnI	GAANNNNTTC	2 cut(s)	1025, 2588
XspI	CTAG	5 cut(s)	1226, 1665, 1778, 2318, 2408
Zsp2I	ATGCAT	1 cut(s)	1682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.