Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0013302

Physical Location & Seq

Genomic Coordinates Forward (+)

19340308 .. 19342532

Gene Structure 2225 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g23640.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGTTGATTAGAAACCTCCGAAGCTCCGTCGCCGCTGTCCGCCGTTTCTCGGCGGCGGCGAAGGTGGAGAAGGTGGTGAGCTCCAAAACGACGAAGGAGTCTGGCGGTGGAGGAGACGCGCTGGGGAGGAGACTTCTGAGTTTGGTTTATGCGAAACGCAGCGCGGCGGTTACTATAGGGAAATGGAAGGAGGAAGGAGGCACTGTGCGGAAGTATGAGCTCAATCGGATCGTGCGTGAGCTTCGGAAGCTCCGGCGTTATAAGCATGCTCTCGAGATATGCGAATGGATGACTTTACAAAAGGATATCAAGCTACTAGCTGGTGATTATGCTGTTGAGTTGGATTTGATTGCGAAGGTTCGGGGTATGAATAGCGCAGAGAAGTTTTTCGAGGATCTACCTGAGCAAATGAGAGATGGAATAACGTGTTCAGCTCTTCTGCATACCTATGTGCAGAATAAAGAGTCTGCCAAAGCGGAAGCTCTGTTTGAAAAGATGAAAGAGTGTGGTTACGTGAAGAATCCCCTTCCATATAACCACATGCTGTCTTTGTATGTGTCGGATGGGAAATTCGACAAGGTTAGGGATGTAATTGGGGAGATGAAGGTTCATAGTCAACCGGATGTTGTCACTTACAATCTATGGTTAACAGTTTGTGCTTCGCAAAATGATGTTGAAAGTGCAGAAAGAGTGTTTCTTGAACTGAAGAAGAGAAAGGTGAATCCGGACTGGGTGACATTTAGCACACTAACGAACTTGTACATAAAAAGCTCACAGATTGAAAAAGCAGCCGCCACTTTGAAGGAGATGGAGAAAATGGCATCTCAGAAGAATCGAATTGCATATTCATCACTCATCAGCCTTCATGCAAACATTGGGGACAAGGCTGGTGTTCAAAGAGTCTGGAAGAAACTAAAATCATATTTCCCCAAAATGAATGACGCTGAGTATACATGTATGATTGCTTCGCTTGTGAAACTCAAGCAGATCGAAGAAGCTGAGAAGCTCTATACTGAGTGGGAGTCTGTCTCTGGGACTCATGATCCTAGGGTCTCGAATATAATTCTTGCTGCTTACATCAACAGAGACCAAATGGATGTGGCTGAAACCTTCTGTAGTCGCATGGTGCAAAATGGTGTCACCCCCTGTTACAGTACTTGGGAGCTTCTTACCTGGGGATTTTTGAAACAAGAGCATACGAAAAAAGCGCTAGAGTATTTTAAGAAAGCAGTTGGTAGTGTGAAAAAATGGGATCCCCATCAAAGATTGATTGCAGAAGTATTTGGCAGGCTTAATGAGGAAGGCAATGTTGAAGAGGCAGAGGAACTAGTGGTTTTCCTTCGGAATGCTGGGCATGTCAGTGCTGAGACATATAATTCACTTCTACGAACTTATGCTCAAGCTGGTACAATGCCACTTTTGGTTGAAGAACGGATGAAGAAGGACAATGTTGAATTGAATAAAGAGACTCGATCACTTCTAAAAAGGATCCGCAAAATCTGTGCAAGTGAGGTTTCCGGCATATGCTCTCCTCCGGAAGTACCAGAAGAAAATTTTGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

521

Amino Acids

59.21

Weight (kDa)

9.06

Isoelectric Point (pI)

39.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	151 - 307	1e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	206 - 254	3.8e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	207 - 251	5.1e-11	PPR repeat family
TPR_24	PF23276	216 - 339	2.5e-06	Fungal tetratrico peptide repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013302)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02820
fragaria_vesca	FvH4_2g23640
malus_domestica	MD03G1265900.v1.1
prunus_persica	Prupe.8G241600_v2.0.a1 Prupe.8G241600_v2.0.a1 Prupe.8G241600_v2.0.a1
pyrus_communis	pycom03g21240
rosa_chinensis	RchiOBHm_Chr6g0291111
rosa_laevigata	RLG00000012143
rosa_multiflora	Rmu_sc0004642.1_g000017 Rmu_sc0033743.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176370
rosa_rugosa	Rorug06G0217700
rosa_samantha	Rh6AG327900 Rh6BG335400 Rh6CG341600 Rh6DG328800
rosa_wichuraiana	Rw6G028520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	261
AasI	GACNNNNNNGTC	1 cut(s)	97
AccI	GTMKAC	1 cut(s)	950
AccII	CGCG	2 cut(s)	119, 164
AccIII	TCCGGA	2 cut(s)	724, 1534
AclWI	GGATC	7 cut(s)	236, 402, 1037, 1247, 1260, 1483, 1496
AcsI	RAATTY	2 cut(s)	569, 1552
AcuI	CTGAAG	1 cut(s)	725
AfaI	GTAC	4 cut(s)	761, 1156, 1408, 1542
AfeI	AGCGCT	1 cut(s)	1209
AfiI	CCNNNNNNNGG	1 cut(s)	49
AflIII	ACRYGT	2 cut(s)	425, 953
AhlI	ACTAGT	1 cut(s)	1327
AjnI	CCWGG	1 cut(s)	1172
Alw21I	GWGCWC	2 cut(s)	83, 222
Alw26I	GTCTC	7 cut(s)	108, 124, 1033, 1057, 1080, 1361, 1460
AlwI	GGATC	7 cut(s)	236, 402, 1037, 1247, 1260, 1483, 1496
Ama87I	CYCGRG	1 cut(s)	272
Aor13HI	TCCGGA	2 cut(s)	724, 1534
Aor51HI	AGCGCT	1 cut(s)	1209
ApeKI	GCWGC	3 cut(s)	159, 788, 1070
ApoI	RAATTY	2 cut(s)	569, 1552
Asp700I	GAANNNNTTC	1 cut(s)	386
AspA2I	CCTAGG	1 cut(s)	1046
AspLEI	GCGC	4 cut(s)	121, 164, 377, 1210
AsuHPI	GGTGA	5 cut(s)	88, 335, 730, 745, 1132
AvaI	CYCGRG	1 cut(s)	272
AvrII	CCTAGG	1 cut(s)	1046
BamHI	GGATCC	2 cut(s)	1252, 1488
BanII	GRGCYC	2 cut(s)	83, 222
BarI	GAAGNNNNNNTAC	2 cut(s)	949, 981
Bbv12I	GWGCWC	2 cut(s)	83, 222
BbvI	GCAGC	3 cut(s)	171, 800, 1057
BccI	CCATC	4 cut(s)	410, 557, 802, 1266
BceAI	ACGGC	1 cut(s)	27
BciT130I	CCWGG	1 cut(s)	1174
BcoDI	GTCTC	7 cut(s)	108, 124, 1033, 1057, 1080, 1361, 1460
BcuI	ACTAGT	1 cut(s)	1327
BfaI	CTAG	4 cut(s)	317, 1047, 1211, 1328
BfmI	CTRYAG	2 cut(s)	174, 1114
BfoI	RGCGCY	1 cut(s)	1211
BisI	GCNGC	8 cut(s)	33, 54, 57, 160, 165, 789, 792, 1071
BlnI	CCTAGG	1 cut(s)	1046
BlsI	GCNGC	8 cut(s)	34, 55, 58, 161, 166, 790, 793, 1072
BmcAI	AGTACT	1 cut(s)	1156
Bme1390I	CCNGG	1 cut(s)	1174
BmeT110I	CYCGRG	1 cut(s)	272
BmiI	GGNNCC	2 cut(s)	1254, 1490
BmrFI	CCNGG	1 cut(s)	1174
BmrI	ACTGGG	1 cut(s)	739
BmsI	GCATC	1 cut(s)	830
BmuI	ACTGGG	1 cut(s)	739
BplI	GAGNNNNNCTC	2 cut(s)	1013, 1045
Bpu10I	CCTNAGC	1 cut(s)	402
BpuEI	CTTGAG	2 cut(s)	965, 1383
BsaAI	YACGTR	1 cut(s)	514
BsaBI	GATNNNNATC	1 cut(s)	1257
BsaI	GGTCTC	2 cut(s)	1057, 1080
BsaJI	CCNNGG	2 cut(s)	1046, 1173
BsaWI	WCCGGW	3 cut(s)	619, 724, 1534
BsaXI	ACNNNNNCTCC	2 cut(s)	189, 219
Bsc4I	CCNNNNNNNGG	1 cut(s)	49
Bse1I	ACTGG	1 cut(s)	734
Bse3DI	GCAATG	1 cut(s)	1312
Bse8I	GATNNNNATC	1 cut(s)	1257
BseAI	TCCGGA	2 cut(s)	724, 1534
BseBI	CCWGG	1 cut(s)	1174
BseDI	CCNNGG	2 cut(s)	1046, 1173
BseGI	GGATG	6 cut(s)	294, 568, 592, 628, 1102, 1440
BseJI	GATNNNNATC	1 cut(s)	1257
BseLI	CCNNNNNNNGG	1 cut(s)	49
BseMI	GCAATG	1 cut(s)	1312
BseMII	CTCAG	7 cut(s)	128, 393, 839, 936, 990, 1005, 1356
BseNI	ACTGG	1 cut(s)	734
BseRI	GAGGAG	3 cut(s)	126, 142, 1521
BseXI	GCAGC	3 cut(s)	171, 800, 1057
BseYI	CCCAGC	2 cut(s)	121, 1349
BsgI	GTGCAG	2 cut(s)	473, 702
Bsh1236I	CGCG	2 cut(s)	119, 164
BsiHKAI	GWGCWC	2 cut(s)	83, 222
BsiHKCI	CYCGRG	1 cut(s)	272
BsiSI	CCGG	5 cut(s)	253, 620, 725, 1518, 1535
BslFI	GGGAC	2 cut(s)	893, 1048
BslI	CCNNNNNNNGG	1 cut(s)	49
BsmAI	GTCTC	7 cut(s)	108, 124, 1033, 1057, 1080, 1361, 1460
BsmBI	CGTCTC	1 cut(s)	108
BsmFI	GGGAC	2 cut(s)	893, 1048
BsmI	GAATGC	1 cut(s)	1351
Bso31I	GGTCTC	2 cut(s)	1057, 1080
BsoBI	CYCGRG	1 cut(s)	272
Bsp1286I	GDGCHC	2 cut(s)	83, 222
Bsp13I	TCCGGA	2 cut(s)	724, 1534
Bsp1407I	TGTACA	1 cut(s)	759
Bsp143I	GATC	7 cut(s)	228, 394, 987, 1042, 1252, 1472, 1488
BspCNI	CTCAG	7 cut(s)	129, 394, 838, 937, 991, 1006, 1357
BspEI	TCCGGA	2 cut(s)	724, 1534
BspFNI	CGCG	2 cut(s)	119, 164
BspHI	TCATGA	1 cut(s)	1039
BspLI	GGNNCC	2 cut(s)	1254, 1490
BspPI	GGATC	7 cut(s)	236, 402, 1037, 1247, 1260, 1483, 1496
BspQI	GCTCTTC	1 cut(s)	441
BspTNI	GGTCTC	2 cut(s)	1057, 1080
BsrDI	GCAATG	1 cut(s)	1312
BsrGI	TGTACA	1 cut(s)	759
BsrI	ACTGG	1 cut(s)	734
BssECI	CCNNGG	2 cut(s)	1046, 1173
BssMI	GATC	7 cut(s)	228, 394, 987, 1042, 1252, 1472, 1488
BssNAI	GTATAC	1 cut(s)	951
BssT1I	CCWWGG	1 cut(s)	1046
Bst1107I	GTATAC	1 cut(s)	951
Bst2UI	CCWGG	1 cut(s)	1174
Bst4CI	ACNGT	3 cut(s)	205, 652, 1154
Bst6I	CTCTTC	3 cut(s)	441, 704, 1308
BstAUI	TGTACA	1 cut(s)	759
BstBAI	YACGTR	1 cut(s)	514
BstC8I	GCNNGC	2 cut(s)	267, 1289
BstDEI	CTNAG	7 cut(s)	137, 402, 825, 945, 999, 1014, 1365
BstF5I	GGATG	6 cut(s)	294, 568, 592, 628, 1102, 1440
BstFNI	CGCG	2 cut(s)	119, 164
BstH2I	RGCGCY	1 cut(s)	1211
BstHHI	GCGC	4 cut(s)	121, 164, 377, 1210
BstKTI	GATC	7 cut(s)	231, 397, 990, 1045, 1255, 1475, 1491
BstMAI	GTCTC	7 cut(s)	108, 124, 1033, 1057, 1080, 1361, 1460
BstMBI	GATC	7 cut(s)	228, 394, 987, 1042, 1252, 1472, 1488
BstMWI	GCNNNNNNNGC	2 cut(s)	247, 262
BstNI	CCWGG	1 cut(s)	1174
BstNSI	RCATGY	4 cut(s)	269, 544, 957, 1358
BstSCI	CCNGG	1 cut(s)	1172
BstSFI	CTRYAG	2 cut(s)	174, 1114
BstUI	CGCG	2 cut(s)	119, 164
BstV1I	GCAGC	3 cut(s)	171, 800, 1057
BstX2I	RGATCY	3 cut(s)	394, 1252, 1488
BstYI	RGATCY	3 cut(s)	394, 1252, 1488
BstZ17I	GTATAC	1 cut(s)	951
BtsCI	GGATG	6 cut(s)	294, 568, 592, 628, 1102, 1440
BtsIMutI	CAGTG	2 cut(s)	201, 1366
Cac8I	GCNNGC	2 cut(s)	267, 1289
CciI	TCATGA	1 cut(s)	1039
CfoI	GCGC	4 cut(s)	121, 164, 377, 1210
CseI	GACGC	2 cut(s)	125, 950
Csp6I	GTAC	4 cut(s)	760, 1155, 1407, 1541
CviAII	CATG	7 cut(s)	266, 541, 866, 954, 1040, 1123, 1355
CviQI	GTAC	4 cut(s)	760, 1155, 1407, 1541
DdeI	CTNAG	7 cut(s)	137, 402, 825, 945, 999, 1014, 1365
DpnI	GATC	7 cut(s)	230, 396, 989, 1044, 1254, 1474, 1490
DpnII	GATC	7 cut(s)	228, 394, 987, 1042, 1252, 1472, 1488
DrdI	GACNNNNNNGTC	1 cut(s)	97
DseDI	GACNNNNNNGTC	1 cut(s)	97
Eam1104I	CTCTTC	3 cut(s)	441, 704, 1308
EarI	CTCTTC	3 cut(s)	441, 704, 1308
EciI	GGCGGA	1 cut(s)	29
Ecl136II	GAGCTC	2 cut(s)	81, 220
Eco130I	CCWWGG	1 cut(s)	1046
Eco24I	GRGCYC	2 cut(s)	83, 222
Eco31I	GGTCTC	2 cut(s)	1057, 1080
Eco32I	GATATC	1 cut(s)	307
Eco47III	AGCGCT	1 cut(s)	1209
Eco53kI	GAGCTC	2 cut(s)	81, 220
Eco57I	CTGAAG	1 cut(s)	725
Eco88I	CYCGRG	1 cut(s)	272
EcoICRI	GAGCTC	2 cut(s)	81, 220
EcoRII	CCWGG	1 cut(s)	1172
EcoRV	GATATC	1 cut(s)	307
EcoT14I	CCWWGG	1 cut(s)	1046
EcoT38I	GRGCYC	2 cut(s)	83, 222
ErhI	CCWWGG	1 cut(s)	1046
Esp3I	CGTCTC	1 cut(s)	108
FaeI	CATG	7 cut(s)	269, 544, 869, 957, 1043, 1126, 1358
FaqI	GGGAC	2 cut(s)	893, 1048
FatI	CATG	7 cut(s)	265, 540, 865, 953, 1039, 1122, 1354
FauNDI	CATATG	1 cut(s)	1523
FblI	GTMKAC	1 cut(s)	950
Fnu4HI	GCNGC	8 cut(s)	33, 54, 57, 160, 165, 789, 792, 1071
FokI	GGATG	6 cut(s)	301, 575, 599, 635, 1109, 1447
FriOI	GRGCYC	2 cut(s)	83, 222
Fsp4HI	GCNGC	8 cut(s)	33, 54, 57, 160, 165, 789, 792, 1071
FspBI	CTAG	4 cut(s)	317, 1047, 1211, 1328
GlaI	GCGC	4 cut(s)	120, 163, 376, 1209
GluI	GCNGC	8 cut(s)	33, 54, 57, 160, 165, 789, 792, 1071
GsaI	CCCAGC	2 cut(s)	125, 1353
HaeII	RGCGCY	1 cut(s)	1211
HapII	CCGG	5 cut(s)	253, 620, 725, 1518, 1535
HgaI	GACGC	2 cut(s)	125, 950
HhaI	GCGC	4 cut(s)	121, 164, 377, 1210
Hin1II	CATG	7 cut(s)	269, 544, 869, 957, 1043, 1126, 1358
Hin6I	GCGC	4 cut(s)	119, 162, 375, 1208
HinP1I	GCGC	4 cut(s)	119, 162, 375, 1208
HincII	GTYRAC	2 cut(s)	617, 648
HindII	GTYRAC	2 cut(s)	617, 648
HinfI	GANTC	9 cut(s)	98, 464, 520, 721, 832, 900, 1022, 1036, 1468
HpaI	GTTAAC	1 cut(s)	648
HpaII	CCGG	5 cut(s)	253, 620, 725, 1518, 1535
HphI	GGTGA	5 cut(s)	88, 335, 730, 745, 1132
Hpy166II	GTNNAC	3 cut(s)	617, 648, 951
Hpy188I	TCNGA	7 cut(s)	20, 138, 228, 246, 562, 828, 1344
Hpy188III	TCNNGA	8 cut(s)	272, 274, 698, 725, 904, 1040, 1054, 1535
Hpy8I	GTNNAC	3 cut(s)	617, 648, 951
Hpy99I	CGWCG	2 cut(s)	32, 94
HpyCH4III	ACNGT	3 cut(s)	205, 652, 1154
HpyCH4IV	ACGT	2 cut(s)	425, 513
HpyCH4V	TGCA	8 cut(s)	442, 454, 683, 842, 869, 1129, 1274, 1505
HpyF10VI	GCNNNNNNNGC	2 cut(s)	247, 262
HpyF3I	CTNAG	7 cut(s)	137, 402, 825, 945, 999, 1014, 1365
HpySE526I	ACGT	2 cut(s)	425, 513
Hsp92II	CATG	7 cut(s)	269, 544, 869, 957, 1043, 1126, 1358
HspAI	GCGC	4 cut(s)	119, 162, 375, 1208
Kpn2I	TCCGGA	2 cut(s)	724, 1534
KspAI	GTTAAC	1 cut(s)	648
Kzo9I	GATC	7 cut(s)	228, 394, 987, 1042, 1252, 1472, 1488
LguI	GCTCTTC	1 cut(s)	441
LmnI	GCTCC	4 cut(s)	29, 86, 255, 1162
Lsp1109I	GCAGC	3 cut(s)	171, 800, 1057
LweI	GCATC	1 cut(s)	830
MaeI	CTAG	4 cut(s)	317, 1047, 1211, 1328
MaeII	ACGT	2 cut(s)	425, 513
MaeIII	GTNAC	6 cut(s)	169, 509, 628, 733, 1138, 1148
MalI	GATC	7 cut(s)	230, 396, 989, 1044, 1254, 1474, 1490
MboI	GATC	7 cut(s)	228, 394, 987, 1042, 1252, 1472, 1488
MflI	RGATCY	3 cut(s)	394, 1252, 1488
MhlI	GDGCHC	2 cut(s)	83, 222
MluCI	AATT	7 cut(s)	569, 591, 837, 1062, 1375, 1454, 1552
MlyI	GAGTC	6 cut(s)	107, 473, 909, 1030, 1031, 1462
MmeI	TCCRAC	2 cut(s)	321, 540
MroI	TCCGGA	2 cut(s)	724, 1534
MroXI	GAANNNNTTC	1 cut(s)	386
MseI	TTAA	3 cut(s)	647, 1221, 1293
MslI	CAYNNNNRTG	2 cut(s)	447, 1359
MspA1I	CMGCKG	1 cut(s)	35
MspI	CCGG	5 cut(s)	253, 620, 725, 1518, 1535
MspR9I	CCNGG	1 cut(s)	1174
Mva1269I	GAATGC	1 cut(s)	1351
MvaI	CCWGG	1 cut(s)	1174
MvnI	CGCG	2 cut(s)	119, 164
MwoI	GCNNNNNNNGC	2 cut(s)	247, 262
NdeI	CATATG	1 cut(s)	1523
NdeII	GATC	7 cut(s)	228, 394, 987, 1042, 1252, 1472, 1488
NlaIII	CATG	7 cut(s)	269, 544, 869, 957, 1043, 1126, 1358
NlaIV	GGNNCC	2 cut(s)	1254, 1490
NmeAIII	GCCGAG	1 cut(s)	29
NmuCI	GTSAC	3 cut(s)	628, 733, 1138
NspI	RCATGY	4 cut(s)	269, 544, 957, 1358
PaeI	GCATGC	1 cut(s)	269
PaeR7I	CTCGAG	1 cut(s)	272
PagI	TCATGA	1 cut(s)	1039
PciI	ACATGT	1 cut(s)	953
PciSI	GCTCTTC	1 cut(s)	441
PcsI	WCGNNNNNNNCGW	3 cut(s)	56, 232, 279
PctI	GAATGC	1 cut(s)	1351
PdmI	GAANNNNTTC	1 cut(s)	386
PfeI	GAWTC	3 cut(s)	520, 721, 832
PkrI	GCNGC	8 cut(s)	34, 55, 58, 161, 166, 790, 793, 1072
PleI	GAGTC	6 cut(s)	106, 472, 908, 1030, 1030, 1462
PpsI	GAGTC	6 cut(s)	106, 472, 908, 1030, 1030, 1462
Ppu21I	YACGTR	1 cut(s)	514
PscI	ACATGT	1 cut(s)	953
PsiI	TTATAA	1 cut(s)	261
Psp124BI	GAGCTC	2 cut(s)	83, 222
Psp6I	CCWGG	1 cut(s)	1172
PspFI	CCCAGC	2 cut(s)	121, 1349
PspGI	CCWGG	1 cut(s)	1172
PspN4I	GGNNCC	2 cut(s)	1254, 1490
PsuI	RGATCY	3 cut(s)	394, 1252, 1488
RsaI	GTAC	4 cut(s)	761, 1156, 1408, 1542
RsaNI	GTAC	4 cut(s)	760, 1155, 1407, 1541
RseI	CAYNNNNRTG	2 cut(s)	447, 1359
SacI	GAGCTC	2 cut(s)	83, 222
SapI	GCTCTTC	1 cut(s)	441
SaqAI	TTAA	3 cut(s)	647, 1221, 1293
SatI	GCNGC	8 cut(s)	33, 54, 57, 160, 165, 789, 792, 1071
Sau3AI	GATC	7 cut(s)	228, 394, 987, 1042, 1252, 1472, 1488
ScaI	AGTACT	1 cut(s)	1156
SchI	GAGTC	6 cut(s)	107, 473, 909, 1030, 1031, 1462
ScrFI	CCNGG	1 cut(s)	1174
SduI	GDGCHC	2 cut(s)	83, 222
SfaNI	GCATC	1 cut(s)	830
SfcI	CTRYAG	2 cut(s)	174, 1114
Sfr274I	CTCGAG	1 cut(s)	272
SlaI	CTCGAG	1 cut(s)	272
SmiMI	CAYNNNNRTG	2 cut(s)	447, 1359
SmlI	CTYRAG	3 cut(s)	272, 980, 1398
SmoI	CTYRAG	3 cut(s)	272, 980, 1398
SpeI	ACTAGT	1 cut(s)	1327
SphI	GCATGC	1 cut(s)	269
Sse9I	AATT	7 cut(s)	569, 591, 837, 1062, 1375, 1454, 1552
SspMI	CTAG	4 cut(s)	317, 1047, 1211, 1328
SstI	GAGCTC	2 cut(s)	83, 222
StyD4I	CCNGG	1 cut(s)	1172
StyI	CCWWGG	1 cut(s)	1046
TaaI	ACNGT	3 cut(s)	205, 652, 1154
TaiI	ACGT	2 cut(s)	428, 516
TaqI	TCGA	7 cut(s)	273, 390, 573, 835, 990, 1055, 1471
TasI	AATT	7 cut(s)	569, 591, 837, 1062, 1375, 1454, 1552
TatI	WGTACW	2 cut(s)	759, 1154
TauI	GCSGC	5 cut(s)	35, 56, 59, 167, 794
TfiI	GAWTC	3 cut(s)	520, 721, 832
Tru1I	TTAA	3 cut(s)	647, 1221, 1293
Tru9I	TTAA	3 cut(s)	647, 1221, 1293
TscAI	CASTG	2 cut(s)	208, 1366
TseFI	GTSAC	3 cut(s)	628, 733, 1138
TseI	GCWGC	3 cut(s)	159, 788, 1070
Tsp45I	GTSAC	3 cut(s)	628, 733, 1138
TspDTI	ATGAA	8 cut(s)	383, 512, 599, 617, 837, 854, 950, 1451
TspGWI	ACGGA	2 cut(s)	16, 1447
TspRI	CASTG	2 cut(s)	208, 1366
XapI	RAATTY	2 cut(s)	569, 1552
XceI	RCATGY	4 cut(s)	269, 544, 957, 1358
XhoI	CTCGAG	1 cut(s)	272
XmaJI	CCTAGG	1 cut(s)	1046
XmiI	GTMKAC	1 cut(s)	950
XmnI	GAANNNNTTC	1 cut(s)	386
XspI	CTAG	4 cut(s)	317, 1047, 1211, 1328
ZrmI	AGTACT	1 cut(s)	1156

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.