Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0013302

Physical Location & Seq

Genomic Coordinates Forward (+)

35117068 .. 35119803

Gene Structure 2736 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1265900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGTTAATTCGAACCCTGCGGAGCTCCATCGCCGCCGTCCGATACTTCTCGGCCGAAGCGCATGCGGAGACGAAGGCAGCGGTCGCCACCGCAGGGAAAAGCTCGAGCGGCGTCCGAGACACTCTGGGAAGGAGACTTCTGAGCCTGGTGTTCCCAAAACGCAGCGCCGTGATTACCATACGGAAATGGAAAGAGGAAGGGCACACGGTGCGCAAGTACGAGCTCAATCGCATCGTTCGTGAGCTTCGCAAGCTCAAGCGGTACAAACATGCCCTCGAGGTATGTGAATGGATGACACTACAACAAGATTTGAAGCTAGTATCAGGTGATTACGCCGTTCACTTAGACTTGATTGCAAAAGTTCGGGGCATGAATAGTGCAGAAAAGTTTTTTGAGGATCTTCCTCTTCAAATGACAGACCGTGCCACCTGTACAGCTCTGCTGCATACCTATGTCCAGAATAAAGTGACTGACAAAGCGGAAGCTCTGATAGCCAAGATGTCAGAGTGTGGTTTCATGAAGCATCCCCTTGCTTATAACCACATGTTATCTCTGTACATTTCCAATGGGCAATTAGACAGGGTTCCAGAACTAATTCAAGAGTTGAAGAGTAATACGTCGCCGGATGTTGTTACTTACAATCTATGGTTAACTGTGTGTGCATCACAAAATGATGTTGAAACTGCAGAAAGAGTTTTCCTTGAACTAAAGAAGGCAAAGCTAAATCCTGACTGGGTCACATGTAGCACGTTAACCAACTTGTATATAAAAAATTCACTGACCGAAAAAGCAGCAGTTACCTTGAAGGAGATGGAGAACTTGGTATCTCAGAAAAATCGAGTCGCATATTCATCCCTGCTCAGCCTGCATACAAACATTGGTGATAAAGAAGGTGTTCGGCGAATCTGGAAAAAAGTAAAATCATTGTTCCCCAAAATGAATGATGCTGAGTATACATGTATGCTGTCTTCGCTTGTGAAACTCAAGCAGTTTGAAGAAGCTGAGAAACTCTATACTGAATGGGAGTCTGTTTCAGGTACTCATGATCCTAGGGTTTCAAATATACTTCTTGCAGCGTACATCAACGAAGACCAAATGAGAAGGGCAGAAACCTTTCATAATCGGATGGTGCAAAATGACATAAAGCCATGTTACAGTACTTGGGAGCTTCTTACATGGGGTTATTTGCAACAAAAACATACGGAAAAAGTGCTAGAGTATTTCAAGAAAGCTGTTGGTAGTGTGAAGAGATGGGATCCTGACAAACGGTTGATTGGGGAAGTATTTAACAGGCTCAAGGAGGAAGGCGATATTCAAGGGGCTGAGGAACTGTTGGTTTTTCTTCGGAATGCTGGTCATGTGAGCACTGAGATATATAATTCTCTTATAAGAATTTATGCAGAAGCTGGTAAAATGCCACTTGTAATTGCAGAAAGGATGGAGAAGGACAATGTTCAGTTGGATGACGAGACTCGTAAGCTCATAAAGATCACTAGCAAAATGTGCGTGAGTGACATTTCTAGCATATTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

512

Amino Acids

58.66

Weight (kDa)

9.02

Isoelectric Point (pI)

34.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	205 - 257	3.1e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	208 - 253	6.3e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013302)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02820
fragaria_vesca	FvH4_2g23640
malus_domestica	MD03G1265900.v1.1
prunus_persica	Prupe.8G241600_v2.0.a1 Prupe.8G241600_v2.0.a1 Prupe.8G241600_v2.0.a1
pyrus_communis	pycom03g21240
rosa_chinensis	RchiOBHm_Chr6g0291111
rosa_laevigata	RLG00000012143
rosa_multiflora	Rmu_sc0004642.1_g000017 Rmu_sc0033743.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176370
rosa_rugosa	Rorug06G0217700
rosa_samantha	Rh6AG327900 Rh6BG335400 Rh6CG341600 Rh6DG328800
rosa_wichuraiana	Rw6G028520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	537, 1388
AbsI	CCTCGAGG	1 cut(s)	275
Acc16I	TGCGCA	1 cut(s)	212
AccBSI	CCGCTC	1 cut(s)	108
AccI	GTMKAC	1 cut(s)	953
AciI	CCGC	8 cut(s)	19, 33, 65, 80, 90, 108, 259, 479
AclWI	GGATC	4 cut(s)	405, 1040, 1250, 1263
AcoI	YGGCCR	1 cut(s)	51
AcsI	RAATTY	2 cut(s)	772, 1392
AcyI	GRCGYC	1 cut(s)	111
AdeI	CACNNNGTG	1 cut(s)	208
AfaI	GTAC	7 cut(s)	218, 263, 433, 557, 1039, 1079, 1159
AfiI	CCNNNNNNNGG	1 cut(s)	93
AflIII	ACRYGT	3 cut(s)	543, 740, 956
AjnI	CCWGG	1 cut(s)	144
Alw21I	GWGCWC	3 cut(s)	26, 225, 1367
Alw26I	GTCTC	4 cut(s)	62, 111, 127, 1463
AlwI	GGATC	4 cut(s)	405, 1040, 1250, 1263
AlwNI	CAGNNNCTG	1 cut(s)	1406
Ama87I	CYCGRG	2 cut(s)	103, 275
AoxI	GGCC	1 cut(s)	51
ApeKI	GCWGC	5 cut(s)	77, 162, 442, 791, 1073
ApoI	RAATTY	2 cut(s)	772, 1392
Asp700I	GAANNNNTTC	3 cut(s)	594, 894, 1113
AspA2I	CCTAGG	1 cut(s)	1049
AspLEI	GCGC	3 cut(s)	61, 167, 213
AsuHPI	GGTGA	2 cut(s)	338, 893
AsuII	TTCGAA	1 cut(s)	10
AvaI	CYCGRG	2 cut(s)	103, 275
AvrII	CCTAGG	1 cut(s)	1049
BaeGI	GKGCMC	1 cut(s)	204
BamHI	GGATCC	1 cut(s)	1255
BanII	GRGCYC	2 cut(s)	26, 225
BarI	GAAGNNNNNNTAC	2 cut(s)	952, 984
BbsI	GAAGAC	2 cut(s)	960, 1095
Bbv12I	GWGCWC	3 cut(s)	26, 225, 1367
BbvCI	CCTCAGC	1 cut(s)	1323
BbvI	GCAGC	5 cut(s)	89, 174, 429, 803, 1085
BccI	CCATC	5 cut(s)	35, 805, 1120, 1245, 1432
BceAI	ACGGC	3 cut(s)	20, 152, 320
BcgI	CGANNNNNNTGC	2 cut(s)	44, 78
BciT130I	CCWGG	1 cut(s)	146
BcoDI	GTCTC	4 cut(s)	62, 111, 127, 1463
BfaI	CTAG	5 cut(s)	317, 1050, 1214, 1494, 1521
BfmI	CTRYAG	1 cut(s)	684
BfoI	RGCGCY	1 cut(s)	168
BisI	GCNGC	7 cut(s)	33, 78, 109, 163, 443, 792, 1074
BlnI	CCTAGG	1 cut(s)	1049
BlpI	GCTNAGC	1 cut(s)	860
BlsI	GCNGC	7 cut(s)	34, 79, 110, 164, 444, 793, 1075
BmcAI	AGTACT	1 cut(s)	1159
Bme1390I	CCNGG	1 cut(s)	146
BmeT110I	CYCGRG	2 cut(s)	103, 275
BmiI	GGNNCC	2 cut(s)	585, 1257
BmrFI	CCNGG	1 cut(s)	146
BmrI	ACTGGG	1 cut(s)	742
BmsI	GCATC	4 cut(s)	240, 532, 671, 934
BmuI	ACTGGG	1 cut(s)	742
BpiI	GAAGAC	2 cut(s)	960, 1095
Bpu10I	CCTNAGC	1 cut(s)	1323
Bpu1102I	GCTNAGC	1 cut(s)	860
Bpu14I	TTCGAA	1 cut(s)	10
BpuEI	CTTGAG	3 cut(s)	239, 968, 1280
BsaHI	GRCGYC	1 cut(s)	111
BsaJI	CCNNGG	1 cut(s)	1049
Bsc4I	CCNNNNNNNGG	1 cut(s)	93
Bse1I	ACTGG	1 cut(s)	737
BseBI	CCWGG	1 cut(s)	146
BseDI	CCNNGG	1 cut(s)	1049
BseGI	GGATG	7 cut(s)	297, 523, 631, 851, 1131, 1443, 1468
BseLI	CCNNNNNNNGG	1 cut(s)	93
BseMII	CTCAG	7 cut(s)	131, 842, 874, 939, 993, 1314, 1359
BseNI	ACTGG	1 cut(s)	737
BseSI	GKGCMC	1 cut(s)	204
BseX3I	CGGCCG	1 cut(s)	51
BseXI	GCAGC	5 cut(s)	89, 174, 429, 803, 1085
BsgI	GTGCAG	1 cut(s)	399
Bsh1285I	CGRYCG	2 cut(s)	54, 84
BshFI	GGCC	1 cut(s)	53
BsiEI	CGRYCG	2 cut(s)	54, 84
BsiHKAI	GWGCWC	3 cut(s)	26, 225, 1367
BsiHKCI	CYCGRG	2 cut(s)	103, 275
BsiSI	CCGG	1 cut(s)	623
BslI	CCNNNNNNNGG	1 cut(s)	93
BsmAI	GTCTC	4 cut(s)	62, 111, 127, 1463
BsmBI	CGTCTC	1 cut(s)	62
BsmI	GAATGC	1 cut(s)	1354
BsnI	GGCC	1 cut(s)	53
BsoBI	CYCGRG	2 cut(s)	103, 275
Bsp119I	TTCGAA	1 cut(s)	10
Bsp1286I	GDGCHC	4 cut(s)	26, 204, 225, 1367
Bsp1407I	TGTACA	2 cut(s)	431, 555
Bsp143I	GATC	4 cut(s)	397, 1045, 1255, 1488
Bsp1720I	GCTNAGC	1 cut(s)	860
BspACI	CCGC	8 cut(s)	19, 33, 65, 80, 90, 108, 259, 479
BspANI	GGCC	1 cut(s)	53
BspCNI	CTCAG	7 cut(s)	132, 841, 873, 940, 994, 1315, 1360
BspHI	TCATGA	2 cut(s)	516, 1042
BspLI	GGNNCC	2 cut(s)	585, 1257
BspMAI	CTGCAG	1 cut(s)	688
BspPI	GGATC	4 cut(s)	405, 1040, 1250, 1263
BspT104I	TTCGAA	1 cut(s)	10
BsrBI	CCGCTC	1 cut(s)	108
BsrGI	TGTACA	2 cut(s)	431, 555
BsrI	ACTGG	1 cut(s)	737
BssECI	CCNNGG	1 cut(s)	1049
BssMI	GATC	4 cut(s)	397, 1045, 1255, 1488
BssNAI	GTATAC	1 cut(s)	954
BssNI	GRCGYC	1 cut(s)	111
BssT1I	CCWWGG	1 cut(s)	1049
Bst1107I	GTATAC	1 cut(s)	954
Bst2UI	CCWGG	1 cut(s)	146
Bst4CI	ACNGT	6 cut(s)	208, 422, 655, 1157, 1269, 1332
Bst6I	CTCTTC	3 cut(s)	411, 602, 1241
BstACI	GRCGYC	1 cut(s)	111
BstAPI	GCANNNNNTGC	2 cut(s)	208, 1503
BstAUI	TGTACA	2 cut(s)	431, 555
BstBI	TTCGAA	1 cut(s)	10
BstC8I	GCNNGC	3 cut(s)	63, 251, 866
BstDEI	CTNAG	8 cut(s)	140, 343, 828, 860, 948, 1002, 1323, 1368
BstF5I	GGATG	7 cut(s)	297, 523, 631, 851, 1131, 1443, 1468
BstH2I	RGCGCY	1 cut(s)	168
BstHHI	GCGC	3 cut(s)	61, 167, 213
BstKTI	GATC	4 cut(s)	400, 1048, 1258, 1491
BstMAI	GTCTC	4 cut(s)	62, 111, 127, 1463
BstMBI	GATC	4 cut(s)	397, 1045, 1255, 1488
BstMCI	CGRYCG	2 cut(s)	54, 84
BstMWI	GCNNNNNNNGC	8 cut(s)	83, 108, 208, 250, 491, 865, 970, 1503
BstNI	CCWGG	1 cut(s)	146
BstNSI	RCATGY	5 cut(s)	65, 272, 547, 744, 960
BstSCI	CCNGG	1 cut(s)	144
BstSFI	CTRYAG	1 cut(s)	684
BstSLI	GKGCMC	1 cut(s)	204
BstV1I	GCAGC	5 cut(s)	89, 174, 429, 803, 1085
BstV2I	GAAGAC	2 cut(s)	960, 1095
BstX2I	RGATCY	2 cut(s)	397, 1255
BstYI	RGATCY	2 cut(s)	397, 1255
BstZ17I	GTATAC	1 cut(s)	954
BstZI	CGGCCG	1 cut(s)	51
BsuRI	GGCC	1 cut(s)	53
BtgZI	GCGATG	1 cut(s)	13
BtsCI	GGATG	7 cut(s)	297, 523, 631, 851, 1131, 1443, 1468
BtsIMutI	CAGTG	2 cut(s)	776, 1365
Cac8I	GCNNGC	3 cut(s)	63, 251, 866
CaiI	CAGNNNCTG	1 cut(s)	1406
CciI	TCATGA	2 cut(s)	516, 1042
CfoI	GCGC	3 cut(s)	61, 167, 213
CseI	GACGC	1 cut(s)	100
Csp6I	GTAC	7 cut(s)	217, 262, 432, 556, 1038, 1078, 1158
CviQI	GTAC	7 cut(s)	217, 262, 432, 556, 1038, 1078, 1158
DdeI	CTNAG	8 cut(s)	140, 343, 828, 860, 948, 1002, 1323, 1368
DpnI	GATC	4 cut(s)	399, 1047, 1257, 1490
DpnII	GATC	4 cut(s)	397, 1045, 1255, 1488
DraIII	CACNNNGTG	1 cut(s)	208
EaeI	YGGCCR	1 cut(s)	51
EagI	CGGCCG	1 cut(s)	51
Eam1104I	CTCTTC	3 cut(s)	411, 602, 1241
EarI	CTCTTC	3 cut(s)	411, 602, 1241
Ecl136II	GAGCTC	2 cut(s)	24, 223
EclXI	CGGCCG	1 cut(s)	51
Eco130I	CCWWGG	1 cut(s)	1049
Eco24I	GRGCYC	2 cut(s)	26, 225
Eco52I	CGGCCG	1 cut(s)	51
Eco53kI	GAGCTC	2 cut(s)	24, 223
Eco88I	CYCGRG	2 cut(s)	103, 275
EcoICRI	GAGCTC	2 cut(s)	24, 223
EcoRII	CCWGG	1 cut(s)	144
EcoT14I	CCWWGG	1 cut(s)	1049
EcoT38I	GRGCYC	2 cut(s)	26, 225
ErhI	CCWWGG	1 cut(s)	1049
Esp3I	CGTCTC	1 cut(s)	62
FblI	GTMKAC	1 cut(s)	953
Fnu4HI	GCNGC	7 cut(s)	33, 78, 109, 163, 443, 792, 1074
FokI	GGATG	7 cut(s)	304, 510, 638, 838, 1138, 1450, 1475
FriOI	GRGCYC	2 cut(s)	26, 225
Fsp4HI	GCNGC	7 cut(s)	33, 78, 109, 163, 443, 792, 1074
FspBI	CTAG	5 cut(s)	317, 1050, 1214, 1494, 1521
FspI	TGCGCA	1 cut(s)	212
GlaI	GCGC	3 cut(s)	60, 166, 212
GluI	GCNGC	7 cut(s)	33, 78, 109, 163, 443, 792, 1074
HaeII	RGCGCY	1 cut(s)	168
HaeIII	GGCC	1 cut(s)	53
HapII	CCGG	1 cut(s)	623
HgaI	GACGC	1 cut(s)	100
HhaI	GCGC	3 cut(s)	61, 167, 213
Hin1I	GRCGYC	1 cut(s)	111
Hin6I	GCGC	3 cut(s)	59, 165, 211
HinP1I	GCGC	3 cut(s)	59, 165, 211
HincII	GTYRAC	2 cut(s)	651, 753
HindII	GTYRAC	2 cut(s)	651, 753
HinfI	GANTC	4 cut(s)	840, 903, 1025, 1471
HpaI	GTTAAC	2 cut(s)	651, 753
HpaII	CCGG	1 cut(s)	623
HphI	GGTGA	2 cut(s)	338, 893
Hpy166II	GTNNAC	4 cut(s)	340, 651, 753, 954
Hpy188I	TCNGA	8 cut(s)	41, 116, 141, 489, 505, 831, 1125, 1347
Hpy8I	GTNNAC	4 cut(s)	340, 651, 753, 954
Hpy99I	CGWCG	1 cut(s)	622
HpyAV	CCTTC	9 cut(s)	67, 123, 191, 706, 799, 884, 1095, 1298, 1438
HpyCH4III	ACNGT	6 cut(s)	208, 422, 655, 1157, 1269, 1332
HpyCH4IV	ACGT	2 cut(s)	617, 749
HpyF10VI	GCNNNNNNNGC	8 cut(s)	83, 108, 208, 250, 491, 865, 970, 1503
HpyF3I	CTNAG	8 cut(s)	140, 343, 828, 860, 948, 1002, 1323, 1368
HpySE526I	ACGT	2 cut(s)	617, 749
Hsp92I	GRCGYC	1 cut(s)	111
HspAI	GCGC	3 cut(s)	59, 165, 211
KspAI	GTTAAC	2 cut(s)	651, 753
Kzo9I	GATC	4 cut(s)	397, 1045, 1255, 1488
LmnI	GCTCC	3 cut(s)	21, 29, 1165
Lsp1109I	GCAGC	5 cut(s)	89, 174, 429, 803, 1085
LweI	GCATC	4 cut(s)	240, 532, 671, 934
MaeI	CTAG	5 cut(s)	317, 1050, 1214, 1494, 1521
MaeII	ACGT	2 cut(s)	617, 749
MaeIII	GTNAC	6 cut(s)	466, 631, 736, 796, 1151, 1511
MalI	GATC	4 cut(s)	399, 1047, 1257, 1490
MbiI	CCGCTC	1 cut(s)	108
MboI	GATC	4 cut(s)	397, 1045, 1255, 1488
MboII	GAAGA	8 cut(s)	392, 398, 619, 960, 1007, 1100, 1258, 1334
MflI	RGATCY	2 cut(s)	397, 1255
MhlI	GDGCHC	4 cut(s)	26, 204, 225, 1367
MluCI	AATT	7 cut(s)	6, 572, 594, 772, 1378, 1392, 1425
MlyI	GAGTC	3 cut(s)	849, 1034, 1465
MmeI	TCCRAC	1 cut(s)	1440
MnlI	CCTC	7 cut(s)	187, 271, 284, 388, 414, 1294, 1318
MroXI	GAANNNNTTC	3 cut(s)	594, 894, 1113
MseI	TTAA	4 cut(s)	5, 650, 752, 1287
MslI	CAYNNNNRTG	1 cut(s)	450
MspA1I	CMGCKG	1 cut(s)	80
MspI	CCGG	1 cut(s)	623
MspR9I	CCNGG	1 cut(s)	146
Mva1269I	GAATGC	1 cut(s)	1354
MvaI	CCWGG	1 cut(s)	146
MwoI	GCNNNNNNNGC	8 cut(s)	83, 108, 208, 250, 491, 865, 970, 1503
NdeII	GATC	4 cut(s)	397, 1045, 1255, 1488
NlaIV	GGNNCC	2 cut(s)	585, 1257
NmeAIII	GCCGAG	1 cut(s)	29
NmuCI	GTSAC	3 cut(s)	466, 736, 1511
NsbI	TGCGCA	1 cut(s)	212
NspI	RCATGY	5 cut(s)	65, 272, 547, 744, 960
NspV	TTCGAA	1 cut(s)	10
PaeI	GCATGC	1 cut(s)	65
PaeR7I	CTCGAG	2 cut(s)	103, 275
PagI	TCATGA	2 cut(s)	516, 1042
PciI	ACATGT	3 cut(s)	543, 740, 956
PcsI	WCGNNNNNNNCGW	1 cut(s)	235
PctI	GAATGC	1 cut(s)	1354
PdmI	GAANNNNTTC	3 cut(s)	594, 894, 1113
PfeI	GAWTC	1 cut(s)	903
PflFI	GACNNNGTC	1 cut(s)	734
PkrI	GCNGC	7 cut(s)	34, 79, 110, 164, 444, 793, 1075
PleI	GAGTC	3 cut(s)	848, 1033, 1465
PpsI	GAGTC	3 cut(s)	848, 1033, 1465
PscI	ACATGT	3 cut(s)	543, 740, 956
PsiI	TTATAA	2 cut(s)	537, 1388
Psp124BI	GAGCTC	2 cut(s)	26, 225
Psp6I	CCWGG	1 cut(s)	144
PspGI	CCWGG	1 cut(s)	144
PspN4I	GGNNCC	2 cut(s)	585, 1257
PspXI	VCTCGAGB	2 cut(s)	103, 275
PstI	CTGCAG	1 cut(s)	688
PstNI	CAGNNNCTG	1 cut(s)	1406
PsuI	RGATCY	2 cut(s)	397, 1255
PsyI	GACNNNGTC	1 cut(s)	734
RsaI	GTAC	7 cut(s)	218, 263, 433, 557, 1039, 1079, 1159
RsaNI	GTAC	7 cut(s)	217, 262, 432, 556, 1038, 1078, 1158
RseI	CAYNNNNRTG	1 cut(s)	450
SacI	GAGCTC	2 cut(s)	26, 225
SaqAI	TTAA	4 cut(s)	5, 650, 752, 1287
SatI	GCNGC	7 cut(s)	33, 78, 109, 163, 443, 792, 1074
Sau3AI	GATC	4 cut(s)	397, 1045, 1255, 1488
ScaI	AGTACT	1 cut(s)	1159
SchI	GAGTC	3 cut(s)	849, 1034, 1465
ScrFI	CCNGG	1 cut(s)	146
SduI	GDGCHC	4 cut(s)	26, 204, 225, 1367
SfaNI	GCATC	4 cut(s)	240, 532, 671, 934
SfcI	CTRYAG	1 cut(s)	684
Sfr274I	CTCGAG	2 cut(s)	103, 275
SfuI	TTCGAA	1 cut(s)	10
SlaI	CTCGAG	2 cut(s)	103, 275
SmiMI	CAYNNNNRTG	1 cut(s)	450
SmlI	CTYRAG	5 cut(s)	103, 254, 275, 983, 1295
SmoI	CTYRAG	5 cut(s)	103, 254, 275, 983, 1295
SphI	GCATGC	1 cut(s)	65
Sse9I	AATT	7 cut(s)	6, 572, 594, 772, 1378, 1392, 1425
SsiI	CCGC	8 cut(s)	19, 33, 65, 80, 90, 108, 259, 479
SspMI	CTAG	5 cut(s)	317, 1050, 1214, 1494, 1521
SstI	GAGCTC	2 cut(s)	26, 225
StyD4I	CCNGG	1 cut(s)	144
StyI	CCWWGG	1 cut(s)	1049
TaaI	ACNGT	6 cut(s)	208, 422, 655, 1157, 1269, 1332
TaiI	ACGT	2 cut(s)	620, 752
TaqI	TCGA	4 cut(s)	10, 104, 276, 838
TaqII	GACCGA	1 cut(s)	797
TasI	AATT	7 cut(s)	6, 572, 594, 772, 1378, 1392, 1425
TatI	WGTACW	3 cut(s)	431, 555, 1157
TauI	GCSGC	2 cut(s)	35, 111
TfiI	GAWTC	1 cut(s)	903
Tru1I	TTAA	4 cut(s)	5, 650, 752, 1287
Tru9I	TTAA	4 cut(s)	5, 650, 752, 1287
TscAI	CASTG	2 cut(s)	783, 1372
TseFI	GTSAC	3 cut(s)	466, 736, 1511
TseI	GCWGC	5 cut(s)	77, 162, 442, 791, 1073
Tsp45I	GTSAC	3 cut(s)	466, 736, 1511
TspDTI	ATGAA	6 cut(s)	386, 505, 533, 840, 953, 1106
TspGWI	ACGGA	2 cut(s)	196, 1217
TspRI	CASTG	2 cut(s)	783, 1372
Tth111I	GACNNNGTC	1 cut(s)	734
XapI	RAATTY	2 cut(s)	772, 1392
XceI	RCATGY	5 cut(s)	65, 272, 547, 744, 960
XhoI	CTCGAG	2 cut(s)	103, 275
XmaJI	CCTAGG	1 cut(s)	1049
XmiI	GTMKAC	1 cut(s)	953
XmnI	GAANNNNTTC	3 cut(s)	594, 894, 1113
XspI	CTAG	5 cut(s)	317, 1050, 1214, 1494, 1521
ZrmI	AGTACT	1 cut(s)	1159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.