RLG00000012143

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0013302
Physical Location & Seq
Reverse (-)
15703189 .. 15705052
1864 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012143

Sequence Viewer

Length: 1533 bp
ATGAGGTTGAATAATAACATGTTGCTGAGAAACCTCCGAAGCTCCATCGCCGCCGTCCGCCGTTTCTCGGCGGTGGCGAGCACCGGAGCGAAGAAAGAGTCTGGCGGTGGAAGAGACACGCTGGGAAGGAGACTTCTGGGCCTGGTGTATGCAAAACGCAGCGCGGTGGTTACTATAGGGAAATGGAAAGAGGAAGGAGGCACAGTGCGGAAGTATGAGCTTAATCGGATTGTTCGTGAGCTTCGTAAGCTCCGGCGTTATAAGCACGCTCTTGAGATATGCGAATGGATGACTTTCCAAAAAGATATCAAGCTATTGGCAGGTGATCATGCTGTTCAGTTGGATTTAATTGCAAAGGTTCGTGGTATGAATAGCGCAGAGAAGTTTTTCGAGGACCTCCCTGAGCAGATGAGAGACGGCACGACCTGTTCAGCTCTTCTGCATACGTATGTCCAGAATAAACAGTCTGCCAAAGCGGAAGCTCTGGTGGAGAAGATGAAAGAGTGTGGTTTCGTGAAGAATCCCCTTCCTTACAACCACATGCTGTCTTTGTATGTGTCCGATGGGCAGTTAGACAAGATTCCAGAAGTAATTGGGGAGATGAAGGTTCATACTAAACCGGATGTTGTCACTTACAATCTATGGTTAACAGTTTGTGCTTCGCAAAATAATGTTGATAGTGCAGAAAGAGTGTTTCTTGAATTGAAGAAGGCAAAGGTAAATCCAGACTGGGTGACATTTAGCACGCTAACAAACTTGTACATCAAAAGTTCACTCATTGAAAAAGCAGCAGCTACCTTGAAGGAGATGGAGAAAATGGCATCTCGGAAGCATCGAGTCGCATATTCGTCTCTCCTCAGCCTGCATGCAAACATTGGGGACAAGGCTGGTGTTCAGCGAGTTTGGAAGAAACTGAAATCATGTTTCCCCAAAATGAATGATGCTGAGTATACATGTATGATAGCTTCGCTTGTGAAACTCAAGGAGATTGAAGAAGCTGAGAAACTCTATACTGAGTGGGAGTCTGTTTCTGGGACTCATGATCCTAGGGTCTCAAATATAATTCTTGCAGCTTACATCAACAGAAACCAAATGGATGTGGCTGAAACCTTCTGTAGTCGTATGGTGCAAAATAGCATCACCCCCTGTTACAGTACTTGGGAGCTTCTTACGTGGGGCTATTTGAAACAAAAGCATACGAAAAAAGTGCTAGAGTATTTTAAGAAAGCAGTTGGTAGTGTGAAAAAATGGGATCCCGACCAAAGATTGATTGCAGAAGTATTTGGCCGGCTCAATGAGGAAGGCAGTGTTGAAGAGGCAGAGGAACTAGTGGTTTTCCTTCGGAATGCTGGTCATGTGAGTACTGAGACATATAATTCACTTCTACGAACTTATGCTCAAGCTGGTACAATGCCACTTTTGGTTGAAGAACGGATGAAGAAGGACAATGTTGAATCGAATAAGGAGACTCGCTCGCTTATAAAACGGATCAGCAAAATTTGTGCGAGTGAAGTTCCTAGCCTATGTTCTTAA

Protein Analysis

511

Amino Acids

58.0

Weight (kDa)

9.31

Isoelectric Point (pI)

36.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 177 - 219 7.3e-06 Pentatricopeptide repeat domain
PPR_3 PF13812 206 - 254 3e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 207 - 252 3.8e-10 PPR repeat family
PPR_long PF17177 215 - 307 4.8e-06 Pentacotripeptide-repeat region of PRORP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013302)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02820
fragaria_vesca FvH4_2g23640
malus_domestica MD03G1265900.v1.1
prunus_persica Prupe.8G241600_v2.0.a1 Prupe.8G241600_v2.0.a1 Prupe.8G241600_v2.0.a1
pyrus_communis pycom03g21240
rosa_chinensis RchiOBHm_Chr6g0291111
rosa_laevigata RLG00000012143
rosa_multiflora Rmu_sc0004642.1_g000017 Rmu_sc0033743.1_g000001
rosa_roxburghii Rroxscaffold_7G00176370
rosa_rugosa Rorug06G0217700
rosa_samantha Rh6AG327900 Rh6BG335400 Rh6CG341600 Rh6DG328800
rosa_wichuraiana Rw6G028520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 261, 1481
AarI CACCTGC 1 cut(s) 311
Acc36I ACCTGC 1 cut(s) 311
AccI GTMKAC 1 cut(s) 950
AccII CGCG 1 cut(s) 164
AciI CCGC 7 cut(s) 51, 58, 71, 105, 164, 208, 476
AclWI GGATC 4 cut(s) 1037, 1247, 1260, 1496
AcoI YGGCCR 1 cut(s) 1285
AcsI RAATTY 1 cut(s) 1497
AfaI GTAC 4 cut(s) 761, 1156, 1363, 1408
AfiI CCNNNNNNNGG 1 cut(s) 67
AflIII ACRYGT 2 cut(s) 18, 953
AhlI ACTAGT 1 cut(s) 1327
AjnI CCWGG 1 cut(s) 141
Alw21I GWGCWC 1 cut(s) 83
Alw26I GTCTC 7 cut(s) 108, 124, 408, 855, 1057, 1361, 1460
AlwI GGATC 4 cut(s) 1037, 1247, 1260, 1496
AoxI GGCC 2 cut(s) 139, 1285
ApeKI GCWGC 4 cut(s) 159, 788, 791, 1070
ApoI RAATTY 1 cut(s) 1497
ArsI GACNNNNNNTTYG 2 cut(s) 83, 115
Asp700I GAANNNNTTC 1 cut(s) 386
AspA2I CCTAGG 1 cut(s) 1046
AspLEI GCGC 2 cut(s) 164, 377
AspS9I GGNCC 2 cut(s) 139, 394
AsuHPI GGTGA 3 cut(s) 335, 745, 1132
AvaII GGWCC 1 cut(s) 394
AvrII CCTAGG 1 cut(s) 1046
BamHI GGATCC 1 cut(s) 1252
BarI GAAGNNNNNNTAC 2 cut(s) 949, 981
Bbv12I GWGCWC 1 cut(s) 83
BbvCI CCTCAGC 1 cut(s) 857
BbvI GCAGC 4 cut(s) 171, 800, 803, 1082
BccI CCATC 3 cut(s) 53, 557, 802
BceAI ACGGC 3 cut(s) 38, 45, 433
BcgI CGANNNNNNTGC 2 cut(s) 1189, 1223
BciT130I CCWGG 1 cut(s) 143
BclI TGATCA 1 cut(s) 325
BcoDI GTCTC 7 cut(s) 108, 124, 408, 855, 1057, 1361, 1460
BcuI ACTAGT 1 cut(s) 1327
BfaI CTAG 4 cut(s) 1047, 1211, 1328, 1518
BfmI CTRYAG 2 cut(s) 174, 1114
BfuAI ACCTGC 1 cut(s) 311
BisI GCNGC 5 cut(s) 51, 160, 789, 792, 1071
BlnI CCTAGG 1 cut(s) 1046
BlsI GCNGC 5 cut(s) 52, 161, 790, 793, 1072
BmcAI AGTACT 2 cut(s) 1156, 1363
Bme1390I CCNGG 1 cut(s) 143
Bme18I GGWCC 1 cut(s) 394
BmgT120I GGNCC 2 cut(s) 139, 394
BmiI GGNNCC 1 cut(s) 1254
BmrFI CCNGG 1 cut(s) 143
BmrI ACTGGG 1 cut(s) 739
BmsI GCATC 4 cut(s) 830, 841, 931, 1146
BmuI ACTGGG 1 cut(s) 739
BplI GAGNNNNNCTC 2 cut(s) 1457, 1489
Bpu10I CCTNAGC 2 cut(s) 402, 857
BpuEI CTTGAG 3 cut(s) 293, 965, 1383
BsaAI YACGTR 2 cut(s) 447, 1173
BsaI GGTCTC 1 cut(s) 1057
BsaJI CCNNGG 1 cut(s) 1046
BsaWI WCCGGW 2 cut(s) 83, 619
BsaXI ACNNNNNCTCC 2 cut(s) 189, 219
Bsc4I CCNNNNNNNGG 1 cut(s) 67
Bse118I RCCGGY 1 cut(s) 1287
Bse1I ACTGG 1 cut(s) 734
BseBI CCWGG 1 cut(s) 143
BseDI CCNNGG 1 cut(s) 1046
BseGI GGATG 4 cut(s) 294, 628, 1102, 1440
BseLI CCNNNNNNNGG 1 cut(s) 67
BseMII CTCAG 7 cut(s) 17, 393, 871, 936, 990, 1005, 1356
BseNI ACTGG 1 cut(s) 734
BseRI GAGGAG 1 cut(s) 845
BseXI GCAGC 4 cut(s) 171, 800, 803, 1082
BseYI CCCAGC 1 cut(s) 121
BsgI GTGCAG 1 cut(s) 702
Bsh1236I CGCG 1 cut(s) 164
BshFI GGCC 2 cut(s) 141, 1287
BsiHKAI GWGCWC 1 cut(s) 83
BsiSI CCGG 4 cut(s) 84, 253, 620, 1288
BslFI GGGAC 2 cut(s) 893, 1048
BslI CCNNNNNNNGG 1 cut(s) 67
BsmAI GTCTC 7 cut(s) 108, 124, 408, 855, 1057, 1361, 1460
BsmBI CGTCTC 2 cut(s) 408, 855
BsmFI GGGAC 2 cut(s) 893, 1048
BsmI GAATGC 1 cut(s) 1351
BsnI GGCC 2 cut(s) 141, 1287
Bso31I GGTCTC 1 cut(s) 1057
Bsp1286I GDGCHC 1 cut(s) 83
Bsp1407I TGTACA 1 cut(s) 759
Bsp143I GATC 4 cut(s) 325, 1042, 1252, 1488
BspACI CCGC 7 cut(s) 51, 58, 71, 105, 164, 208, 476
BspANI GGCC 2 cut(s) 141, 1287
BspCNI CTCAG 7 cut(s) 18, 394, 870, 937, 991, 1006, 1357
BspFNI CGCG 1 cut(s) 164
BspHI TCATGA 1 cut(s) 1039
BspLI GGNNCC 1 cut(s) 1254
BspMI ACCTGC 1 cut(s) 311
BspPI GGATC 4 cut(s) 1037, 1247, 1260, 1496
BspQI GCTCTTC 1 cut(s) 441
BspTNI GGTCTC 1 cut(s) 1057
BsrFI RCCGGY 1 cut(s) 1287
BsrGI TGTACA 1 cut(s) 759
BsrI ACTGG 1 cut(s) 734
BssAI RCCGGY 1 cut(s) 1287
BssECI CCNNGG 1 cut(s) 1046
BssMI GATC 4 cut(s) 325, 1042, 1252, 1488
BssNAI GTATAC 1 cut(s) 951
BssT1I CCWWGG 1 cut(s) 1046
Bst1107I GTATAC 1 cut(s) 951
Bst2UI CCWGG 1 cut(s) 143
Bst4CI ACNGT 4 cut(s) 205, 465, 652, 1154
Bst6I CTCTTC 3 cut(s) 106, 441, 1308
BstAUI TGTACA 1 cut(s) 759
BstBAI YACGTR 2 cut(s) 447, 1173
BstC8I GCNNGC 7 cut(s) 79, 267, 746, 863, 867, 1289, 1475
BstDEI CTNAG 7 cut(s) 26, 402, 857, 945, 999, 1014, 1365
BstF5I GGATG 4 cut(s) 294, 628, 1102, 1440
BstFNI CGCG 1 cut(s) 164
BstHHI GCGC 2 cut(s) 164, 377
BstKTI GATC 4 cut(s) 328, 1045, 1255, 1491
BstMAI GTCTC 7 cut(s) 108, 124, 408, 855, 1057, 1361, 1460
BstMBI GATC 4 cut(s) 325, 1042, 1252, 1488
BstMWI GCNNNNNNNGC 2 cut(s) 247, 262
BstNI CCWGG 1 cut(s) 143
BstNSI RCATGY 4 cut(s) 22, 544, 869, 957
BstSCI CCNGG 1 cut(s) 141
BstSFI CTRYAG 2 cut(s) 174, 1114
BstSNI TACGTA 1 cut(s) 447
BstUI CGCG 1 cut(s) 164
BstV1I GCAGC 4 cut(s) 171, 800, 803, 1082
BstX2I RGATCY 1 cut(s) 1252
BstYI RGATCY 1 cut(s) 1252
BstZ17I GTATAC 1 cut(s) 951
BsuRI GGCC 2 cut(s) 141, 1287
BtgZI GCGATG 1 cut(s) 31
BtsCI GGATG 4 cut(s) 294, 628, 1102, 1440
BtsI GCAGTG 1 cut(s) 1312
BtsIMutI CAGTG 2 cut(s) 210, 1312
BveI ACCTGC 1 cut(s) 311
Cac8I GCNNGC 7 cut(s) 79, 267, 746, 863, 867, 1289, 1475
CciI TCATGA 1 cut(s) 1039
CfoI GCGC 2 cut(s) 164, 377
Cfr10I RCCGGY 1 cut(s) 1287
Cfr13I GGNCC 2 cut(s) 139, 394
Csp6I GTAC 4 cut(s) 760, 1155, 1362, 1407
CviAII CATG 8 cut(s) 19, 329, 541, 866, 921, 954, 1040, 1355
CviQI GTAC 4 cut(s) 760, 1155, 1362, 1407
DdeI CTNAG 7 cut(s) 26, 402, 857, 945, 999, 1014, 1365
DpnI GATC 4 cut(s) 327, 1044, 1254, 1490
DpnII GATC 4 cut(s) 325, 1042, 1252, 1488
EaeI YGGCCR 1 cut(s) 1285
Eam1104I CTCTTC 3 cut(s) 106, 441, 1308
EarI CTCTTC 3 cut(s) 106, 441, 1308
EciI GGCGGA 1 cut(s) 47
Eco105I TACGTA 1 cut(s) 447
Eco130I CCWWGG 1 cut(s) 1046
Eco31I GGTCTC 1 cut(s) 1057
Eco32I GATATC 1 cut(s) 307
Eco47I GGWCC 1 cut(s) 394
EcoO109I RGGNCCY 1 cut(s) 394
EcoRII CCWGG 1 cut(s) 141
EcoRV GATATC 1 cut(s) 307
EcoT14I CCWWGG 1 cut(s) 1046
ErhI CCWWGG 1 cut(s) 1046
Esp3I CGTCTC 2 cut(s) 408, 855
FaeI CATG 8 cut(s) 22, 332, 544, 869, 924, 957, 1043, 1358
FaqI GGGAC 2 cut(s) 893, 1048
FatI CATG 8 cut(s) 18, 328, 540, 865, 920, 953, 1039, 1354
FbaI TGATCA 1 cut(s) 325
FblI GTMKAC 1 cut(s) 950
Fnu4HI GCNGC 5 cut(s) 51, 160, 789, 792, 1071
FokI GGATG 4 cut(s) 301, 635, 1109, 1447
Fsp4HI GCNGC 5 cut(s) 51, 160, 789, 792, 1071
FspBI CTAG 4 cut(s) 1047, 1211, 1328, 1518
GlaI GCGC 2 cut(s) 163, 376
GluI GCNGC 5 cut(s) 51, 160, 789, 792, 1071
GsaI CCCAGC 1 cut(s) 125
HaeIII GGCC 2 cut(s) 141, 1287
HapII CCGG 4 cut(s) 84, 253, 620, 1288
HhaI GCGC 2 cut(s) 164, 377
Hin1II CATG 8 cut(s) 22, 332, 544, 869, 924, 957, 1043, 1358
Hin6I GCGC 2 cut(s) 162, 375
HinP1I GCGC 2 cut(s) 162, 375
HincII GTYRAC 1 cut(s) 648
HindII GTYRAC 1 cut(s) 648
HinfI GANTC 8 cut(s) 98, 520, 580, 837, 1022, 1036, 1454, 1468
HpaI GTTAAC 1 cut(s) 648
HpaII CCGG 4 cut(s) 84, 253, 620, 1288
HphI GGTGA 3 cut(s) 335, 745, 1132
Hpy166II GTNNAC 3 cut(s) 648, 773, 951
Hpy188I TCNGA 5 cut(s) 38, 228, 562, 828, 1344
Hpy188III TCNNGA 9 cut(s) 236, 272, 454, 514, 584, 698, 725, 1040, 1256
Hpy8I GTNNAC 3 cut(s) 648, 773, 951
HpyCH4III ACNGT 4 cut(s) 205, 465, 652, 1154
HpyCH4IV ACGT 2 cut(s) 446, 1172
HpyCH4V TGCA 9 cut(s) 152, 353, 442, 683, 865, 869, 1070, 1129, 1274
HpyF10VI GCNNNNNNNGC 2 cut(s) 247, 262
HpyF3I CTNAG 7 cut(s) 26, 402, 857, 945, 999, 1014, 1365
HpySE526I ACGT 2 cut(s) 446, 1172
Hsp92II CATG 8 cut(s) 22, 332, 544, 869, 924, 957, 1043, 1358
HspAI GCGC 2 cut(s) 162, 375
KroI GCCGGC 1 cut(s) 1287
KroNI GCCGGC 1 cut(s) 1289
Ksp22I TGATCA 1 cut(s) 325
KspAI GTTAAC 1 cut(s) 648
Kzo9I GATC 4 cut(s) 325, 1042, 1252, 1488
LguI GCTCTTC 1 cut(s) 441
LmnI GCTCC 4 cut(s) 47, 86, 255, 1162
Lsp1109I GCAGC 4 cut(s) 171, 800, 803, 1082
LweI GCATC 4 cut(s) 830, 841, 931, 1146
MaeI CTAG 4 cut(s) 1047, 1211, 1328, 1518
MaeII ACGT 2 cut(s) 446, 1172
MaeIII GTNAC 4 cut(s) 169, 628, 733, 1148
MalI GATC 4 cut(s) 327, 1044, 1254, 1490
MboI GATC 4 cut(s) 325, 1042, 1252, 1488
MflI RGATCY 1 cut(s) 1252
MhlI GDGCHC 1 cut(s) 83
MluCI AATT 6 cut(s) 348, 591, 701, 1062, 1375, 1497
MlyI GAGTC 5 cut(s) 107, 846, 1030, 1031, 1462
MmeI TCCRAC 1 cut(s) 321
MnlI CCTC 9 cut(s) 44, 184, 191, 385, 407, 866, 1291, 1309, 1315
MroNI GCCGGC 1 cut(s) 1287
MroXI GAANNNNTTC 1 cut(s) 386
MseI TTAA 5 cut(s) 222, 347, 647, 1221, 1531
MslI CAYNNNNRTG 1 cut(s) 447
MspI CCGG 4 cut(s) 84, 253, 620, 1288
MspR9I CCNGG 1 cut(s) 143
Mva1269I GAATGC 1 cut(s) 1351
MvaI CCWGG 1 cut(s) 143
MvnI CGCG 1 cut(s) 164
MwoI GCNNNNNNNGC 2 cut(s) 247, 262
NaeI GCCGGC 1 cut(s) 1289
NdeII GATC 4 cut(s) 325, 1042, 1252, 1488
NgoMIV GCCGGC 1 cut(s) 1287
NlaIII CATG 8 cut(s) 22, 332, 544, 869, 924, 957, 1043, 1358
NlaIV GGNNCC 1 cut(s) 1254
NmeAIII GCCGAG 1 cut(s) 47
NmuCI GTSAC 2 cut(s) 628, 733
NspI RCATGY 4 cut(s) 22, 544, 869, 957
PaeI GCATGC 1 cut(s) 869
PagI TCATGA 1 cut(s) 1039
PaqCI CACCTGC 1 cut(s) 311
PciI ACATGT 2 cut(s) 18, 953
PciSI GCTCTTC 1 cut(s) 441
PcsI WCGNNNNNNNCGW 4 cut(s) 74, 232, 241, 832
PctI GAATGC 1 cut(s) 1351
PdiI GCCGGC 1 cut(s) 1289
PdmI GAANNNNTTC 1 cut(s) 386
PfeI GAWTC 3 cut(s) 520, 580, 1454
PkrI GCNGC 5 cut(s) 52, 161, 790, 793, 1072
PleI GAGTC 5 cut(s) 106, 845, 1030, 1030, 1462
PpsI GAGTC 5 cut(s) 106, 845, 1030, 1030, 1462
Ppu21I YACGTR 2 cut(s) 447, 1173
PpuMI RGGWCCY 1 cut(s) 394
PscI ACATGT 2 cut(s) 18, 953
PsiI TTATAA 2 cut(s) 261, 1481
Psp5II RGGWCCY 1 cut(s) 394
Psp6I CCWGG 1 cut(s) 141
PspFI CCCAGC 1 cut(s) 121
PspGI CCWGG 1 cut(s) 141
PspN4I GGNNCC 1 cut(s) 1254
PspPI GGNCC 2 cut(s) 139, 394
PspPPI RGGWCCY 1 cut(s) 394
PsuI RGATCY 1 cut(s) 1252
RsaI GTAC 4 cut(s) 761, 1156, 1363, 1408
RsaNI GTAC 4 cut(s) 760, 1155, 1362, 1407
RseI CAYNNNNRTG 1 cut(s) 447
SapI GCTCTTC 1 cut(s) 441
SaqAI TTAA 5 cut(s) 222, 347, 647, 1221, 1531
SatI GCNGC 5 cut(s) 51, 160, 789, 792, 1071
Sau3AI GATC 4 cut(s) 325, 1042, 1252, 1488
Sau96I GGNCC 2 cut(s) 139, 394
ScaI AGTACT 2 cut(s) 1156, 1363
SchI GAGTC 5 cut(s) 107, 846, 1030, 1031, 1462
ScrFI CCNGG 1 cut(s) 143
SduI GDGCHC 1 cut(s) 83
SfaNI GCATC 4 cut(s) 830, 841, 931, 1146
SfcI CTRYAG 2 cut(s) 174, 1114
SinI GGWCC 1 cut(s) 394
SmiMI CAYNNNNRTG 1 cut(s) 447
SmlI CTYRAG 3 cut(s) 272, 980, 1398
SmoI CTYRAG 3 cut(s) 272, 980, 1398
SnaBI TACGTA 1 cut(s) 447
SpeI ACTAGT 1 cut(s) 1327
SphI GCATGC 1 cut(s) 869
Sse9I AATT 6 cut(s) 348, 591, 701, 1062, 1375, 1497
SsiI CCGC 7 cut(s) 51, 58, 71, 105, 164, 208, 476
SspMI CTAG 4 cut(s) 1047, 1211, 1328, 1518
StyD4I CCNGG 1 cut(s) 141
StyI CCWWGG 1 cut(s) 1046
TaaI ACNGT 4 cut(s) 205, 465, 652, 1154
TaiI ACGT 2 cut(s) 449, 1175
TaqI TCGA 3 cut(s) 390, 835, 1457
TasI AATT 6 cut(s) 348, 591, 701, 1062, 1375, 1497
TatI WGTACW 3 cut(s) 759, 1154, 1361
TauI GCSGC 1 cut(s) 53
TfiI GAWTC 3 cut(s) 520, 580, 1454
Tru1I TTAA 5 cut(s) 222, 347, 647, 1221, 1531
Tru9I TTAA 5 cut(s) 222, 347, 647, 1221, 1531
TscAI CASTG 2 cut(s) 210, 1312
TseFI GTSAC 2 cut(s) 628, 733
TseI GCWGC 4 cut(s) 159, 788, 791, 1070
Tsp45I GTSAC 2 cut(s) 628, 733
TspDTI ATGAA 6 cut(s) 383, 512, 599, 617, 950, 1451
TspGWI ACGGA 2 cut(s) 1447, 1501
TspRI CASTG 2 cut(s) 210, 1312
VpaK11BI GGWCC 1 cut(s) 394
XapI RAATTY 1 cut(s) 1497
XceI RCATGY 4 cut(s) 22, 544, 869, 957
XmaJI CCTAGG 1 cut(s) 1046
XmiI GTMKAC 1 cut(s) 950
XmnI GAANNNNTTC 1 cut(s) 386
XspI CTAG 4 cut(s) 1047, 1211, 1328, 1518
ZrmI AGTACT 2 cut(s) 1156, 1363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.