FvH4_2g24160
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
19726707 .. 19729588
2882 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g24160.t2

Sequence Viewer

Length: 1563 bp
ATGAGGATCATAAGCTATACTGGTGTTACAAAACCCAGCTTTTTGCTTGTGCATCCAGAGTTACCAGCACTTGCATGGAAGCTCCAGTTTACTTCCATATCGCCTCAAATCCCCCGTTCTCGTGAGAAGTTGGTTGGGTTGATTACAAGATGTCAGCATTCTGATGCTGGTAGAACAAAGGCGACCAGATATGCAGATTCATCTGTGTCAAGTACAAAGTCCAGTCGTTTGGGTCAGAGACAACGAGGCCCTTCATCATTGTATAGTCGTCCTAGTCTATTAGATATGAGGAATGACAAGGTGGCGAATCGTGCCCGGGTTTATGATTTCTTACGAGGAATTGGTATTGTCCCTGATGAGCTTGATGGGTTGGAGCTTCCTGTTACCGTTGAAGTTATGAGGGAGCGTGTGGATTTTCTTCATAGCCTTGGGCTTACAGTTGAAGACATCAACAACTATCCACTTGTTCTAGGCTGCAGTGTGAAGAAGAACATGATTCCTGTGCTTGATTATCTTGGCAAATTGGGTGTTCGGAAATCCACTTTCACTGATTTTTTGAGAAGATATCCGCAAGTCTTACATGCTAGTGTGGTAGTTGACCTTGCACCGGTGGTCCAGTATCTTCAAGGAATGGATATCAAGCCCGATGATATTCCTCGTGTACTTGAAAGATATCCAGAATTGATGGGATTCAAGCTTGAGGGAACTATGAGCACGTCGGTAGCTTATTTAGTTGGCATTGGGGTTGCAAGAAGAGAGATTGGAGGTGTTTTAACTAGATATCCTGAGATTTTGGGGATGCGTGTAGGAAGGGTGATCAAGCCTTTTGTTGAGTATCTTGAAAACTTAGGTATTCCAAGGTTAGGGGTGGCTAGATTGATAGAGAAGCGGCCTCACATTCTTGGGTTTGGATTGGAGGAGAGGGTGAAACCAAATATTGAATCTCTTTTGGAGTTTCACGTTAGAAAAGAATCACTTGCTTCTGTTGTTGCACAATATCCTGAGATCATAGGAATTGACCTAAAGCCTAAGCTTGTCAGTCAACAAAGTTCACTCAAGTCAGTTATTGATTTGGGTCCAGAGGACTTTGGTAGAGTTGTTGAGAAGATGCCACAGGTTGTTAGCCTGAGTGATAAACCCATGATGAAGCATGTTGATTTCCTTAAGAATTGTGGGTTCTCTTTGGAACAAATGAGGAAGATGGTCACTGGGTGTCCCCAGTTGCTTGCTTTGAATCTTGACATCATGAAACTTAGCTTTGATTTCTTTCAGAAAGAGATGCAAAGGCCTTTGGATGACTTGGTTGCTTTCCCAGCATTCTTCACTTATGGTCTGGAATCCACCATAAAACCAAGGCATAAGATGGTGACAAGGAAAGGGTTGAAATGCTCGCTTGGATGGCTTCTCAATTGCTCTGATGAGAAGTTTGAGCAACGGATGGACTACGACACTATTGAAATGGACGAGATGGAATCATCGCCATCATTCGATATGAATACTCTCACTGAACCAAGGAGCGATGAGTCAGGTTCAGATTATGATAGTGATGATGAGTATGCATAG

Protein Analysis

521

Amino Acids

58.85

Weight (kDa)

7.6

Isoelectric Point (pI)

40.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 194 - 502 3.3e-110 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 569, 889
AclWI GGATC 1 cut(s) 14
AdeI CACNNNGTG 1 cut(s) 1212
AfaI GTAC 2 cut(s) 214, 663
AfiI CCNNNNNNNGG 2 cut(s) 607, 863
AflII CTTAAG 1 cut(s) 1163
AgeI ACCGGT 1 cut(s) 607
AjiI CACGTC 1 cut(s) 717
AluBI AGCT 9 cut(s) 15, 39, 82, 361, 376, 697, 725, 1033, 1257
AluI AGCT 9 cut(s) 15, 39, 82, 361, 376, 697, 725, 1033, 1257
Alw21I GWGCWC 1 cut(s) 716
Alw26I GTCTC 1 cut(s) 232
AlwI GGATC 1 cut(s) 14
Ama87I CYCGRG 1 cut(s) 315
AoxI GGCC 3 cut(s) 247, 890, 1286
ApeKI GCWGC 1 cut(s) 474
AsiGI ACCGGT 1 cut(s) 607
AspS9I GGNCC 3 cut(s) 248, 613, 1076
AsuC2I CCSGG 2 cut(s) 316, 317
AsuHPI GGTGA 3 cut(s) 826, 937, 1378
AvaI CYCGRG 1 cut(s) 315
AvaII GGWCC 2 cut(s) 613, 1076
BaeGI GKGCMC 1 cut(s) 316
BauI CACGAG 2 cut(s) 120, 657
BbsI GAAGAC 1 cut(s) 450
Bbv12I GWGCWC 1 cut(s) 716
BbvI GCAGC 1 cut(s) 461
BccI CCATC 8 cut(s) 359, 679, 1195, 1357, 1392, 1432, 1462, 1489
BclI TGATCA 1 cut(s) 816
BcnI CCSGG 2 cut(s) 316, 317
BcoDI GTCTC 1 cut(s) 232
BfaI CTAG 5 cut(s) 273, 470, 585, 777, 873
BfmI CTRYAG 1 cut(s) 475
BfrI CTTAAG 1 cut(s) 1163
BisI GCNGC 2 cut(s) 475, 890
BlsI GCNGC 2 cut(s) 476, 891
Bme1390I CCNGG 2 cut(s) 316, 317
Bme18I GGWCC 2 cut(s) 613, 1076
BmeT110I CYCGRG 1 cut(s) 315
BmgBI CACGTC 1 cut(s) 717
BmgT120I GGNCC 3 cut(s) 248, 613, 1076
BmiI GGNNCC 1 cut(s) 1077
BmrFI CCNGG 2 cut(s) 316, 317
BmrI ACTGGG 2 cut(s) 1213, 1218
BmsI GCATC 5 cut(s) 61, 154, 789, 1098, 1269
BmuI ACTGGG 2 cut(s) 1213, 1218
BpiI GAAGAC 1 cut(s) 450
BpmI CTGGAG 1 cut(s) 68
Bpu10I CCTNAGC 1 cut(s) 1029
BpuEI CTTGAG 2 cut(s) 719, 1040
BpuMI CCSGG 2 cut(s) 316, 317
BsaJI CCNNGG 5 cut(s) 315, 427, 857, 1352, 1511
BsaWI WCCGGW 1 cut(s) 607
Bsc4I CCNNNNNNNGG 2 cut(s) 607, 863
Bse118I RCCGGY 1 cut(s) 607
Bse1I ACTGG 6 cut(s) 25, 85, 222, 616, 1213, 1219
BseDI CCNNGG 5 cut(s) 315, 427, 857, 1352, 1511
BseGI GGATG 5 cut(s) 52, 804, 1300, 1403, 1443
BseLI CCNNNNNNNGG 2 cut(s) 607, 863
BseMII CTCAG 3 cut(s) 777, 993, 1118
BseNI ACTGG 6 cut(s) 25, 85, 222, 616, 1213, 1219
BseRI GAGGAG 1 cut(s) 932
BseSI GKGCMC 1 cut(s) 316
BseXI GCAGC 1 cut(s) 461
BseYI CCCAGC 2 cut(s) 35, 1312
BshFI GGCC 3 cut(s) 249, 892, 1288
BshTI ACCGGT 1 cut(s) 607
BsiHKAI GWGCWC 1 cut(s) 716
BsiHKCI CYCGRG 1 cut(s) 315
BsiSI CCGG 2 cut(s) 316, 608
BslFI GGGAC 2 cut(s) 335, 1200
BslI CCNNNNNNNGG 2 cut(s) 607, 863
BsmAI GTCTC 1 cut(s) 232
BsmFI GGGAC 2 cut(s) 335, 1200
BsmI GAATGC 2 cut(s) 157, 1316
BsnI GGCC 3 cut(s) 249, 892, 1288
BsoBI CYCGRG 1 cut(s) 315
Bsp1286I GDGCHC 2 cut(s) 316, 716
Bsp143I GATC 3 cut(s) 6, 816, 1005
BspACI CCGC 2 cut(s) 569, 889
BspANI GGCC 3 cut(s) 249, 892, 1288
BspCNI CTCAG 3 cut(s) 778, 994, 1119
BspHI TCATGA 1 cut(s) 1245
BspLI GGNNCC 1 cut(s) 1077
BspMAI CTGCAG 1 cut(s) 479
BspPI GGATC 1 cut(s) 14
BspTI CTTAAG 1 cut(s) 1163
BsrFI RCCGGY 1 cut(s) 607
BsrI ACTGG 6 cut(s) 25, 85, 222, 616, 1213, 1219
BssAI RCCGGY 1 cut(s) 607
BssECI CCNNGG 5 cut(s) 315, 427, 857, 1352, 1511
BssMI GATC 3 cut(s) 6, 816, 1005
BssSI CACGAG 2 cut(s) 120, 657
BssT1I CCWWGG 4 cut(s) 427, 857, 1352, 1511
Bst2BI CACGAG 2 cut(s) 120, 657
Bst4CI ACNGT 2 cut(s) 388, 439
Bst6I CTCTTC 1 cut(s) 748
BstAFI CTTAAG 1 cut(s) 1163
BstC8I GCNNGC 2 cut(s) 1227, 1391
BstDEI CTNAG 6 cut(s) 786, 847, 1002, 1029, 1127, 1253
BstF5I GGATG 5 cut(s) 52, 804, 1300, 1403, 1443
BstKTI GATC 3 cut(s) 9, 819, 1008
BstMAI GTCTC 1 cut(s) 232
BstMBI GATC 3 cut(s) 6, 816, 1005
BstMWI GCNNNNNNNGC 3 cut(s) 311, 1313, 1399
BstNSI RCATGY 2 cut(s) 584, 1154
BstSCI CCNGG 2 cut(s) 314, 315
BstSFI CTRYAG 1 cut(s) 475
BstSLI GKGCMC 1 cut(s) 316
BstV1I GCAGC 1 cut(s) 461
BstV2I GAAGAC 1 cut(s) 450
BstXI CCANNNNNNTGG 1 cut(s) 229
BsuRI GGCC 3 cut(s) 249, 892, 1288
BtgZI GCGATG 2 cut(s) 1461, 1533
BtrI CACGTC 1 cut(s) 717
BtsCI GGATG 5 cut(s) 52, 804, 1300, 1403, 1443
BtsI GCAGTG 1 cut(s) 484
BtsIMutI CAGTG 4 cut(s) 484, 546, 1206, 1503
Cac8I GCNNGC 2 cut(s) 1227, 1391
CciI TCATGA 1 cut(s) 1245
Cfr10I RCCGGY 1 cut(s) 607
Cfr13I GGNCC 3 cut(s) 248, 613, 1076
Cfr9I CCCGGG 1 cut(s) 315
Csp6I GTAC 2 cut(s) 213, 662
CspAI ACCGGT 1 cut(s) 607
CviAII CATG 6 cut(s) 75, 493, 581, 1141, 1151, 1246
CviQI GTAC 2 cut(s) 213, 662
DdeI CTNAG 6 cut(s) 786, 847, 1002, 1029, 1127, 1253
DpnI GATC 3 cut(s) 8, 818, 1007
DpnII GATC 3 cut(s) 6, 816, 1005
DraIII CACNNNGTG 1 cut(s) 1212
Eam1104I CTCTTC 1 cut(s) 748
EarI CTCTTC 1 cut(s) 748
Eco130I CCWWGG 4 cut(s) 427, 857, 1352, 1511
Eco147I AGGCCT 1 cut(s) 1288
Eco32I GATATC 4 cut(s) 566, 637, 674, 782
Eco47I GGWCC 2 cut(s) 613, 1076
Eco88I CYCGRG 1 cut(s) 315
EcoO109I RGGNCCY 1 cut(s) 248
EcoRV GATATC 4 cut(s) 566, 637, 674, 782
EcoT14I CCWWGG 4 cut(s) 427, 857, 1352, 1511
EcoT22I ATGCAT 1 cut(s) 1561
ErhI CCWWGG 4 cut(s) 427, 857, 1352, 1511
FaeI CATG 6 cut(s) 78, 496, 584, 1144, 1154, 1249
FalI AAGNNNNNCTT 2 cut(s) 960, 992
FaqI GGGAC 2 cut(s) 335, 1200
FatI CATG 6 cut(s) 74, 492, 580, 1140, 1150, 1245
FbaI TGATCA 1 cut(s) 816
Fnu4HI GCNGC 2 cut(s) 475, 890
FokI GGATG 5 cut(s) 39, 811, 1307, 1410, 1450
Fsp4HI GCNGC 2 cut(s) 475, 890
FspBI CTAG 5 cut(s) 273, 470, 585, 777, 873
GluI GCNGC 2 cut(s) 475, 890
GsaI CCCAGC 2 cut(s) 39, 1316
GsuI CTGGAG 1 cut(s) 68
HaeIII GGCC 3 cut(s) 249, 892, 1288
HapII CCGG 2 cut(s) 316, 608
Hin1II CATG 6 cut(s) 78, 496, 584, 1144, 1154, 1249
HincII GTYRAC 2 cut(s) 598, 1043
HindII GTYRAC 2 cut(s) 598, 1043
HindIII AAGCTT 2 cut(s) 695, 1031
HpaII CCGG 2 cut(s) 316, 608
HphI GGTGA 3 cut(s) 826, 937, 1378
Hpy166II GTNNAC 5 cut(s) 90, 598, 662, 1043, 1052
Hpy188I TCNGA 6 cut(s) 163, 237, 534, 1272, 1417, 1534
Hpy8I GTNNAC 5 cut(s) 90, 598, 662, 1043, 1052
Hpy99I CGWCG 1 cut(s) 721
HpyAV CCTTC 2 cut(s) 261, 804
HpyCH4III ACNGT 2 cut(s) 388, 439
HpyCH4IV ACGT 2 cut(s) 716, 960
HpyCH4V TGCA 9 cut(s) 52, 74, 194, 477, 605, 749, 992, 1282, 1559
HpyF10VI GCNNNNNNNGC 3 cut(s) 311, 1313, 1399
HpyF3I CTNAG 6 cut(s) 786, 847, 1002, 1029, 1127, 1253
HpySE526I ACGT 2 cut(s) 716, 960
Hsp92II CATG 6 cut(s) 78, 496, 584, 1144, 1154, 1249
Ksp22I TGATCA 1 cut(s) 816
Kzo9I GATC 3 cut(s) 6, 816, 1005
LmnI GCTCC 4 cut(s) 87, 373, 403, 1515
Lsp1109I GCAGC 1 cut(s) 461
LweI GCATC 5 cut(s) 61, 154, 789, 1098, 1269
MaeI CTAG 5 cut(s) 273, 470, 585, 777, 873
MaeII ACGT 2 cut(s) 716, 960
MaeIII GTNAC 5 cut(s) 25, 60, 382, 1204, 1366
MalI GATC 3 cut(s) 8, 818, 1007
MboI GATC 3 cut(s) 6, 816, 1005
MfeI CAATTG 1 cut(s) 1408
MhlI GDGCHC 2 cut(s) 316, 716
MluCI AATT 6 cut(s) 339, 521, 680, 1014, 1168, 1408
MlyI GAGTC 1 cut(s) 1532
MmeI TCCRAC 1 cut(s) 351
Mph1103I ATGCAT 1 cut(s) 1561
MseI TTAA 2 cut(s) 773, 1164
MslI CAYNNNNRTG 3 cut(s) 73, 162, 585
MspCI CTTAAG 1 cut(s) 1163
MspI CCGG 2 cut(s) 316, 608
MspR9I CCNGG 2 cut(s) 316, 317
MunI CAATTG 1 cut(s) 1408
Mva1269I GAATGC 2 cut(s) 157, 1316
MwoI GCNNNNNNNGC 3 cut(s) 311, 1313, 1399
NciI CCSGG 2 cut(s) 316, 317
NdeII GATC 3 cut(s) 6, 816, 1005
NlaIII CATG 6 cut(s) 78, 496, 584, 1144, 1154, 1249
NlaIV GGNNCC 1 cut(s) 1077
NmuCI GTSAC 2 cut(s) 1204, 1366
NsiI ATGCAT 1 cut(s) 1561
NspI RCATGY 2 cut(s) 584, 1154
PagI TCATGA 1 cut(s) 1245
PceI AGGCCT 1 cut(s) 1288
PctI GAATGC 2 cut(s) 157, 1316
PfeI GAWTC 9 cut(s) 197, 307, 496, 690, 941, 971, 1234, 1337, 1472
PinAI ACCGGT 1 cut(s) 607
PkrI GCNGC 2 cut(s) 476, 891
PleI GAGTC 1 cut(s) 1531
PpsI GAGTC 1 cut(s) 1531
PspFI CCCAGC 2 cut(s) 35, 1312
PspN4I GGNNCC 1 cut(s) 1077
PspPI GGNCC 3 cut(s) 248, 613, 1076
PstI CTGCAG 1 cut(s) 479
RsaI GTAC 2 cut(s) 214, 663
RsaNI GTAC 2 cut(s) 213, 662
RseI CAYNNNNRTG 3 cut(s) 73, 162, 585
SaqAI TTAA 2 cut(s) 773, 1164
SatI GCNGC 2 cut(s) 475, 890
Sau3AI GATC 3 cut(s) 6, 816, 1005
Sau96I GGNCC 3 cut(s) 248, 613, 1076
SchI GAGTC 1 cut(s) 1532
ScrFI CCNGG 2 cut(s) 316, 317
SduI GDGCHC 2 cut(s) 316, 716
SfaNI GCATC 5 cut(s) 61, 154, 789, 1098, 1269
SfcI CTRYAG 1 cut(s) 475
SgrAI CRCCGGYG 1 cut(s) 607
SinI GGWCC 2 cut(s) 613, 1076
SmaI CCCGGG 1 cut(s) 317
SmiMI CAYNNNNRTG 3 cut(s) 73, 162, 585
SmlI CTYRAG 3 cut(s) 698, 1055, 1163
SmoI CTYRAG 3 cut(s) 698, 1055, 1163
Sse9I AATT 6 cut(s) 339, 521, 680, 1014, 1168, 1408
SseBI AGGCCT 1 cut(s) 1288
SsiI CCGC 2 cut(s) 569, 889
SspI AATATT 1 cut(s) 937
SspMI CTAG 5 cut(s) 273, 470, 585, 777, 873
StuI AGGCCT 1 cut(s) 1288
StyD4I CCNGG 2 cut(s) 314, 315
StyI CCWWGG 4 cut(s) 427, 857, 1352, 1511
TaaI ACNGT 2 cut(s) 388, 439
TaiI ACGT 2 cut(s) 719, 963
TaqI TCGA 1 cut(s) 1488
TasI AATT 6 cut(s) 339, 521, 680, 1014, 1168, 1408
TatI WGTACW 2 cut(s) 212, 661
TauI GCSGC 1 cut(s) 892
TfiI GAWTC 9 cut(s) 197, 307, 496, 690, 941, 971, 1234, 1337, 1472
Tru1I TTAA 2 cut(s) 773, 1164
Tru9I TTAA 2 cut(s) 773, 1164
TscAI CASTG 4 cut(s) 484, 553, 1213, 1510
TseFI GTSAC 2 cut(s) 1204, 1366
TseI GCWGC 1 cut(s) 474
Tsp45I GTSAC 2 cut(s) 1204, 1366
TspDTI ATGAA 6 cut(s) 189, 243, 410, 1160, 1262, 1508
TspGWI ACGGA 1 cut(s) 1450
TspMI CCCGGG 1 cut(s) 315
TspRI CASTG 4 cut(s) 484, 553, 1213, 1510
Vha464I CTTAAG 1 cut(s) 1163
VpaK11BI GGWCC 2 cut(s) 613, 1076
XceI RCATGY 2 cut(s) 584, 1154
XcmI CCANNNNNNNNNTGG 1 cut(s) 72
XmaI CCCGGG 1 cut(s) 315
XspI CTAG 5 cut(s) 273, 470, 585, 777, 873
Zsp2I ATGCAT 1 cut(s) 1561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.