pycom11g25870
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
28558201 .. 28559913
1713 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g25870.2

Sequence Viewer

Length: 1644 bp
ATGATAACTCACTGTTATTATCTTCTTGTATTACCCTTCGTTTTTCGCAGGCGGGTTGGTAGTTTTGAATCTGGAAGTATGAAGATCAGATGCTATACTGGTATTACGAAACCCAGCTTTTTGCTTGTGCATTCAGAGTTACCGGTACTTACATCTCTTAAGCCCCAATTCACTTCTATATCCACGCTTTGCAATCGAGAGAAGTTGATAGGGTTGATAACAAGGTGTCAGTATTCTGTTTCTGGTAGAAGGTCAGCAACCAGTTATAAGGATTCATCGGTTTCAAATACAAACACCAGTCGTGCAGGTAGGAGAGATAGAGGTTCTTCATCCTTATATAGTCGTCCTAGTCTCTTAGAGATGAAGAATGAAAGGATGGAAATTCGTGCCCGGGTTTATGATTTCTTGCGAGAAATTGGTATTATCCCTGATGAGCTTGATGGATTGGAGCTTCCTGTTACAGTCGAAGTTATGAGGGAACGTGTGGATTTTCTTCACAATCTGGGACTTACAGTCGAAGACATTAACAACTATCCACTTGTTCTAGGCTGTAGTGTGAAGAAAAACATGATTCCTGTGCTCGATTATCTTGGGAAGTTGGGTGTTAGGAAATCCACATTCACAGAGTTCTTGAGAAGATATCCACAAGTCCTGCATGCTAGTGTTGTTATTGACCTTTCACCAGTGGTCAAGTATCTTCAAGGAATGGATATCAAACCGGATGACATTCCTCGGGTTCTTGAGAAATACCCAGAAGTGCTGGGATTCAAGCTTGAGGGGACCATGAGCACTTCGGTGGCTTATTTAGTTGGAATTGGGGTTGCAAGAAGGGAGATTGGAGGAGTTTTAACTAGATACCCCGAGATTTTAGGGATGCGTGTAGGTAGGGTGATCAAGCCTTTTGTTGAGTATCTCGAAAAGCTGGGTATTCCTAGACTAGGTGTGGCTAGACTGATAGAGAAGCGTCCTCACATCCTTGGGTTTGGATTGGAGAAGAGGGTGAAACCGAATATTCAATCCCTTTTGGAGTTTTGTGTTCGAGAAGAATCACTTGCTTCTGTAGTGGCACAGTATCCTGAGATCATAGGAATTGATCTCAAGCCTAAGCTTCTCAGTCAACAAAGTTCACTCAAGTCGGTAATAGATTTGGATCCCGAGGACTTTGGCAGAGTTGTTGAGAAGATGCCTCAAGTTGTTAGCCTCAGTGATAGACCTATGATGAAGCATGTCGATTTCCTTAAGAATTGTGGATTTTCCTTGGAGCAAGTGAGGAAGATGGTCGTCGGGTGTCCCCAGTTGCTTGCCTTGAATCTGGACATCATGAAACTCAGCTTTGATTTCTTTCAAACAGAGATGCAAATGCCTTTGGATGACTTGGTTGCTTTCCCAGCATTCTTTACTTATGGTCTGGAATCGACTATAAAACCAAGACATAAGATGGTTTCGAAGAAAGCGTTGAAATGCTCCCTTGGATGGCTTCTCAATTGCTCTGATGAAAAGTTTGCACAACGGATGGACTACGACACCATTGACATGGAGGAGATGGAATCATTGCCATCGTTTGATATGAATACGCTCACAGAACCAAGGAGCGACGATTCAGGTTCTGAATACGATGATGACAGCGATGACGATTATGTATAG

Protein Analysis

548

Amino Acids

62.18

Weight (kDa)

7.04

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 267
Acc36I ACCTGC 1 cut(s) 296
AciI CCGC 1 cut(s) 52
AclWI GGATC 2 cut(s) 1145, 1158
AcsI RAATTY 1 cut(s) 381
AfaI GTAC 1 cut(s) 147
AfiI CCNNNNNNNGG 2 cut(s) 938, 1473
AflII CTTAAG 2 cut(s) 158, 1238
AflIII ACRYGT 1 cut(s) 481
AgeI ACCGGT 1 cut(s) 142
AgsI TTSAA 8 cut(s) 68, 285, 701, 769, 1016, 1309, 1346, 1459
AhdI GACNNNNNGTC 1 cut(s) 512
AleI CACNNNNGTG 1 cut(s) 794
AluBI AGCT 7 cut(s) 117, 436, 451, 772, 922, 1108, 1332
AluI AGCT 7 cut(s) 117, 436, 451, 772, 922, 1108, 1332
Alw21I GWGCWC 2 cut(s) 582, 791
Alw26I GTCTC 1 cut(s) 356
AlwI GGATC 2 cut(s) 1145, 1158
AlwNI CAGNNNCTG 1 cut(s) 1607
Ama87I CYCGRG 4 cut(s) 390, 732, 860, 1154
ApoI RAATTY 1 cut(s) 381
AsiGI ACCGGT 1 cut(s) 142
AspS9I GGNCC 1 cut(s) 780
AsuC2I CCSGG 2 cut(s) 391, 392
AsuHPI GGTGA 3 cut(s) 672, 901, 1012
AsuII TTCGAA 1 cut(s) 1445
AvaI CYCGRG 4 cut(s) 390, 732, 860, 1154
AvaII GGWCC 1 cut(s) 780
BaeGI GKGCMC 1 cut(s) 391
BamHI GGATCC 1 cut(s) 1150
BbsI GAAGAC 1 cut(s) 525
Bbv12I GWGCWC 2 cut(s) 582, 791
BccI CCATC 8 cut(s) 370, 434, 1270, 1432, 1467, 1507, 1537, 1564
BciVI GTATCC 1 cut(s) 1083
BclI TGATCA 1 cut(s) 891
BcnI CCSGG 2 cut(s) 391, 392
BcoDI GTCTC 1 cut(s) 356
BfaI CTAG 7 cut(s) 348, 545, 660, 852, 933, 938, 948
BfmI CTRYAG 2 cut(s) 550, 1059
BfrI CTTAAG 2 cut(s) 158, 1238
BfuAI ACCTGC 1 cut(s) 296
BfuI GTATCC 1 cut(s) 1083
Bme1390I CCNGG 2 cut(s) 391, 392
Bme18I GGWCC 1 cut(s) 780
BmeRI GACNNNNNGTC 1 cut(s) 512
BmeT110I CYCGRG 4 cut(s) 390, 732, 860, 1154
BmgT120I GGNCC 1 cut(s) 780
BmiI GGNNCC 2 cut(s) 781, 1152
BmrFI CCNGG 2 cut(s) 391, 392
BmrI ACTGGG 1 cut(s) 1288
BmsI GCATC 4 cut(s) 80, 864, 1173, 1344
BmuI ACTGGG 1 cut(s) 1288
BpiI GAAGAC 1 cut(s) 525
Bpu10I CCTNAGC 1 cut(s) 1104
Bpu14I TTCGAA 1 cut(s) 1445
BpuEI CTTGAG 6 cut(s) 652, 761, 794, 1082, 1115, 1173
BpuMI CCSGG 2 cut(s) 391, 392
BsaBI GATNNNNATC 1 cut(s) 1149
BsaJI CCNNGG 7 cut(s) 390, 731, 976, 1155, 1257, 1468, 1586
BsaWI WCCGGW 2 cut(s) 142, 718
Bsc4I CCNNNNNNNGG 2 cut(s) 938, 1473
Bse118I RCCGGY 1 cut(s) 142
Bse1I ACTGG 5 cut(s) 103, 261, 297, 683, 1294
Bse3DI GCAATG 1 cut(s) 1550
Bse8I GATNNNNATC 1 cut(s) 1149
BseDI CCNNGG 7 cut(s) 390, 731, 976, 1155, 1257, 1468, 1586
BseGI GGATG 8 cut(s) 329, 381, 727, 879, 972, 1375, 1478, 1518
BseJI GATNNNNATC 1 cut(s) 1149
BseLI CCNNNNNNNGG 2 cut(s) 938, 1473
BseMI GCAATG 1 cut(s) 1550
BseMII CTCAG 4 cut(s) 1068, 1126, 1216, 1342
BseNI ACTGG 5 cut(s) 103, 261, 297, 683, 1294
BseRI GAGGAG 2 cut(s) 855, 1553
BseSI GKGCMC 1 cut(s) 391
BseYI CCCAGC 4 cut(s) 113, 760, 922, 1387
BsgI GTGCAG 1 cut(s) 324
BshTI ACCGGT 1 cut(s) 142
BsiHKAI GWGCWC 2 cut(s) 582, 791
BsiHKCI CYCGRG 4 cut(s) 390, 732, 860, 1154
BsiSI CCGG 3 cut(s) 143, 391, 719
BslFI GGGAC 3 cut(s) 519, 793, 1275
BslI CCNNNNNNNGG 2 cut(s) 938, 1473
BsmAI GTCTC 1 cut(s) 356
BsmFI GGGAC 3 cut(s) 519, 793, 1275
BsmI GAATGC 2 cut(s) 130, 1391
BsoBI CYCGRG 4 cut(s) 390, 732, 860, 1154
Bsp119I TTCGAA 1 cut(s) 1445
Bsp1286I GDGCHC 3 cut(s) 391, 582, 791
Bsp143I GATC 5 cut(s) 84, 891, 1080, 1093, 1150
BspACI CCGC 1 cut(s) 52
BspCNI CTCAG 4 cut(s) 1069, 1125, 1215, 1341
BspHI TCATGA 1 cut(s) 1320
BspLI GGNNCC 2 cut(s) 781, 1152
BspMI ACCTGC 1 cut(s) 296
BspPI GGATC 2 cut(s) 1145, 1158
BspT104I TTCGAA 1 cut(s) 1445
BspTI CTTAAG 2 cut(s) 158, 1238
BsrDI GCAATG 1 cut(s) 1550
BsrFI RCCGGY 1 cut(s) 142
BsrI ACTGG 5 cut(s) 103, 261, 297, 683, 1294
BssAI RCCGGY 1 cut(s) 142
BssECI CCNNGG 7 cut(s) 390, 731, 976, 1155, 1257, 1468, 1586
BssMI GATC 5 cut(s) 84, 891, 1080, 1093, 1150
BssT1I CCWWGG 4 cut(s) 976, 1257, 1468, 1586
Bst4CI ACNGT 4 cut(s) 14, 463, 514, 1071
Bst6I CTCTTC 1 cut(s) 989
BstAFI CTTAAG 2 cut(s) 158, 1238
BstBI TTCGAA 1 cut(s) 1445
BstC8I GCNNGC 3 cut(s) 50, 657, 1302
BstDEI CTNAG 6 cut(s) 355, 1077, 1104, 1112, 1202, 1328
BstENI CCTNNNNNAGG 1 cut(s) 936
BstF5I GGATG 8 cut(s) 329, 381, 727, 879, 972, 1375, 1478, 1518
BstKTI GATC 5 cut(s) 87, 894, 1083, 1096, 1153
BstMAI GTCTC 1 cut(s) 356
BstMBI GATC 5 cut(s) 84, 891, 1080, 1093, 1150
BstMWI GCNNNNNNNGC 1 cut(s) 1388
BstNSI RCATGY 2 cut(s) 659, 1229
BstSCI CCNGG 2 cut(s) 389, 390
BstSFI CTRYAG 2 cut(s) 550, 1059
BstSLI GKGCMC 1 cut(s) 391
BstV2I GAAGAC 1 cut(s) 525
BstX2I RGATCY 1 cut(s) 1150
BstXI CCANNNNNNTGG 1 cut(s) 1534
BstYI RGATCY 1 cut(s) 1150
BsuI GTATCC 1 cut(s) 1083
BtsCI GGATG 8 cut(s) 329, 381, 727, 879, 972, 1375, 1478, 1518
BtsIMutI CAGTG 3 cut(s) 10, 690, 1210
BveI ACCTGC 1 cut(s) 296
Cac8I GCNNGC 3 cut(s) 50, 657, 1302
CaiI CAGNNNCTG 1 cut(s) 1607
CciI TCATGA 1 cut(s) 1320
Cfr10I RCCGGY 1 cut(s) 142
Cfr13I GGNCC 1 cut(s) 780
Cfr9I CCCGGG 1 cut(s) 390
CseI GACGC 1 cut(s) 953
Csp6I GTAC 1 cut(s) 146
CspAI ACCGGT 1 cut(s) 142
CviAII CATG 6 cut(s) 568, 656, 784, 1226, 1321, 1534
CviQI GTAC 1 cut(s) 146
DdeI CTNAG 6 cut(s) 355, 1077, 1104, 1112, 1202, 1328
DpnI GATC 5 cut(s) 86, 893, 1082, 1095, 1152
DpnII GATC 5 cut(s) 84, 891, 1080, 1093, 1150
DriI GACNNNNNGTC 1 cut(s) 512
Eam1104I CTCTTC 1 cut(s) 989
Eam1105I GACNNNNNGTC 1 cut(s) 512
EarI CTCTTC 1 cut(s) 989
Eco130I CCWWGG 4 cut(s) 976, 1257, 1468, 1586
Eco32I GATATC 2 cut(s) 641, 712
Eco47I GGWCC 1 cut(s) 780
Eco88I CYCGRG 4 cut(s) 390, 732, 860, 1154
EcoNI CCTNNNNNAGG 1 cut(s) 936
EcoRV GATATC 2 cut(s) 641, 712
EcoT14I CCWWGG 4 cut(s) 976, 1257, 1468, 1586
ErhI CCWWGG 4 cut(s) 976, 1257, 1468, 1586
FaeI CATG 6 cut(s) 571, 659, 787, 1229, 1324, 1537
FalI AAGNNNNNCTT 2 cut(s) 1035, 1067
FaqI GGGAC 3 cut(s) 519, 793, 1275
FatI CATG 6 cut(s) 567, 655, 783, 1225, 1320, 1533
FauI CCCGC 1 cut(s) 45
FbaI TGATCA 1 cut(s) 891
FokI GGATG 8 cut(s) 316, 388, 734, 886, 959, 1382, 1485, 1525
FspBI CTAG 7 cut(s) 348, 545, 660, 852, 933, 938, 948
GsaI CCCAGC 4 cut(s) 117, 764, 926, 1391
HapII CCGG 3 cut(s) 143, 391, 719
HgaI GACGC 1 cut(s) 953
Hin1II CATG 6 cut(s) 571, 659, 787, 1229, 1324, 1537
HincII GTYRAC 1 cut(s) 1118
HindII GTYRAC 1 cut(s) 1118
HindIII AAGCTT 2 cut(s) 770, 1106
HinfI GANTC 9 cut(s) 68, 272, 571, 765, 1046, 1309, 1412, 1547, 1598
HpaII CCGG 3 cut(s) 143, 391, 719
HphI GGTGA 3 cut(s) 672, 901, 1012
Hpy166II GTNNAC 2 cut(s) 1118, 1127
Hpy188I TCNGA 4 cut(s) 89, 136, 1492, 1609
Hpy8I GTNNAC 2 cut(s) 1118, 1127
Hpy99I CGWCG 2 cut(s) 1286, 1598
HpyAV CCTTC 3 cut(s) 46, 243, 822
HpyCH4III ACNGT 4 cut(s) 14, 463, 514, 1071
HpyCH4IV ACGT 1 cut(s) 481
HpyCH4V TGCA 7 cut(s) 130, 192, 305, 655, 824, 1357, 1505
HpyF10VI GCNNNNNNNGC 1 cut(s) 1388
HpyF3I CTNAG 6 cut(s) 355, 1077, 1104, 1112, 1202, 1328
HpySE526I ACGT 1 cut(s) 481
Hsp92II CATG 6 cut(s) 571, 659, 787, 1229, 1324, 1537
Ksp22I TGATCA 1 cut(s) 891
Kzo9I GATC 5 cut(s) 84, 891, 1080, 1093, 1150
LmnI GCTCC 4 cut(s) 448, 1261, 1469, 1590
LweI GCATC 4 cut(s) 80, 864, 1173, 1344
MaeI CTAG 7 cut(s) 348, 545, 660, 852, 933, 938, 948
MaeII ACGT 1 cut(s) 481
MaeIII GTNAC 2 cut(s) 138, 457
MalI GATC 5 cut(s) 86, 893, 1082, 1095, 1152
MboI GATC 5 cut(s) 84, 891, 1080, 1093, 1150
MfeI CAATTG 1 cut(s) 1483
MflI RGATCY 1 cut(s) 1150
MhlI GDGCHC 3 cut(s) 391, 582, 791
MluCI AATT 7 cut(s) 167, 381, 414, 813, 1089, 1243, 1483
MmeI TCCRAC 1 cut(s) 790
MseI TTAA 4 cut(s) 159, 525, 848, 1239
MslI CAYNNNNRTG 3 cut(s) 660, 794, 1532
MspCI CTTAAG 2 cut(s) 158, 1238
MspI CCGG 3 cut(s) 143, 391, 719
MspR9I CCNGG 2 cut(s) 391, 392
MunI CAATTG 1 cut(s) 1483
Mva1269I GAATGC 2 cut(s) 130, 1391
MwoI GCNNNNNNNGC 1 cut(s) 1388
NciI CCSGG 2 cut(s) 391, 392
NdeII GATC 5 cut(s) 84, 891, 1080, 1093, 1150
NlaIII CATG 6 cut(s) 571, 659, 787, 1229, 1324, 1537
NlaIV GGNNCC 2 cut(s) 781, 1152
NspI RCATGY 2 cut(s) 659, 1229
NspV TTCGAA 1 cut(s) 1445
OliI CACNNNNGTG 1 cut(s) 794
PaeI GCATGC 1 cut(s) 659
PagI TCATGA 1 cut(s) 1320
PcsI WCGNNNNNNNCGW 1 cut(s) 1451
PctI GAATGC 2 cut(s) 130, 1391
PfeI GAWTC 9 cut(s) 68, 272, 571, 765, 1046, 1309, 1412, 1547, 1598
PinAI ACCGGT 1 cut(s) 142
PsiI TTATAA 1 cut(s) 267
PspFI CCCAGC 4 cut(s) 113, 760, 922, 1387
PspN4I GGNNCC 2 cut(s) 781, 1152
PspPI GGNCC 1 cut(s) 780
PstNI CAGNNNCTG 1 cut(s) 1607
PsuI RGATCY 1 cut(s) 1150
RsaI GTAC 1 cut(s) 147
RsaNI GTAC 1 cut(s) 146
RseI CAYNNNNRTG 3 cut(s) 660, 794, 1532
SaqAI TTAA 4 cut(s) 159, 525, 848, 1239
Sau3AI GATC 5 cut(s) 84, 891, 1080, 1093, 1150
Sau96I GGNCC 1 cut(s) 780
ScrFI CCNGG 2 cut(s) 391, 392
SduI GDGCHC 3 cut(s) 391, 582, 791
SfaNI GCATC 4 cut(s) 80, 864, 1173, 1344
SfcI CTRYAG 2 cut(s) 550, 1059
SfuI TTCGAA 1 cut(s) 1445
SinI GGWCC 1 cut(s) 780
SmaI CCCGGG 1 cut(s) 392
SmiMI CAYNNNNRTG 3 cut(s) 660, 794, 1532
SmlI CTYRAG 8 cut(s) 158, 631, 740, 773, 1097, 1130, 1188, 1238
SmoI CTYRAG 8 cut(s) 158, 631, 740, 773, 1097, 1130, 1188, 1238
SphI GCATGC 1 cut(s) 659
Sse9I AATT 7 cut(s) 167, 381, 414, 813, 1089, 1243, 1483
SsiI CCGC 1 cut(s) 52
SspI AATATT 1 cut(s) 1012
SspMI CTAG 7 cut(s) 348, 545, 660, 852, 933, 938, 948
StyD4I CCNGG 2 cut(s) 389, 390
StyI CCWWGG 4 cut(s) 976, 1257, 1468, 1586
TaaI ACNGT 4 cut(s) 14, 463, 514, 1071
TaiI ACGT 1 cut(s) 484
TaqI TCGA 9 cut(s) 196, 465, 516, 582, 915, 1039, 1230, 1415, 1445
TasI AATT 7 cut(s) 167, 381, 414, 813, 1089, 1243, 1483
TfiI GAWTC 9 cut(s) 68, 272, 571, 765, 1046, 1309, 1412, 1547, 1598
Tru1I TTAA 4 cut(s) 159, 525, 848, 1239
Tru9I TTAA 4 cut(s) 159, 525, 848, 1239
TscAI CASTG 3 cut(s) 17, 690, 1210
TspDTI ATGAA 9 cut(s) 95, 264, 318, 377, 384, 1235, 1337, 1509, 1583
TspGWI ACGGA 1 cut(s) 1525
TspMI CCCGGG 1 cut(s) 390
TspRI CASTG 3 cut(s) 17, 690, 1210
Vha464I CTTAAG 2 cut(s) 158, 1238
VpaK11BI GGWCC 1 cut(s) 780
XagI CCTNNNNNAGG 1 cut(s) 936
XapI RAATTY 1 cut(s) 381
XceI RCATGY 2 cut(s) 659, 1229
XmaI CCCGGG 1 cut(s) 390
XspI CTAG 7 cut(s) 348, 545, 660, 852, 933, 938, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.