Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0010055

Physical Location & Seq

Genomic Coordinates Reverse (-)

15087561 .. 15089123

Gene Structure 1563 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00175540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGAGGATCATAAGCTATGCTGGTGTTACAAAACCCAGCTTTTTGCTTGTGCATCCGGAGTTACCGGCACTTGCATGGAAGCTACAATTAACTTCTATATCGCCTCGAATCCCTCGTACTCGTGAGAAGTTGGTTGGGTTGATTACAAGGTCTCAGCATTCTGATACTGGTAGAACACAAGCAACCAGGTATGCTGATTCATCTGTGTCAAAGACAAAGTCCAGTCGTTTGGGTCAGAGACAACAAGGCCCTTCATCATTGTATAGTCGTCCTAGTCTTTTAGATATGAAGAATGACAAGGTGGCAAATCGTGCCCGGGTTTATGATTTCTTACGAGGAATTGGTATTATCCCTGATGAGCTTGATGGGTTGGAGCTTCCTGTTACAGTTGAAGTTATGAGGGAGCGTGTGGATTTTCTTCACAACCTGGGGCTTACAGTTGAAGACATCAACAGCTATCCACTTGTTCTAGGCTGCAGTGTGAAGAAGAACATGATTCCTGTGCTTGATTATCTTGGCAAATTGGGTGTTAGGAAATCCACTTTCACCGAGTTCTTGAGAAGATATCCGCAAGTCTTACATGCTAGCGTGGTTGTTGACCTTGCACCGGTGGTCCAGTATCTGCAAGGAATGGATATCAAGCCTGATGATATTCCTCGTGTACTTGAAAGATATCCAGAATTGATGGGATTCAAGCTTGAGGGAACCATGAGCACGTCGGTGGCTTATTTAGTTGGCATTGGAGTTGCAAGAAGAGAGATTGGAGGTGTTTTAACTAGATATCCTGAGATTTTGGGAATGCGTGTAGGTAGGGTGATCAAGCCTTTTGTTGAGTATCTTGAAAACTTGGGTATTCCAAGATTAGGGGTGGCTAGATTGATAGAGAAGCGGCCGCACATTCTCGGTTTTGGATTGGAGGAGAGTGTGAAACCAAATATTGAATCCCTTTTGGAGTTTCATGTTCGAAAAGAATCACTTGCTTCTGTTGTTGCACAATATCCTGAGATAATAGGAATTGACCTAAAGCCTAAGCTTTTGAGTCAACAGAGTTCACTCAAGTCAGTAATTGATTTGGGTCCAGAGGACTTTGGTAGAGTTGTTGAGAAGATGCCACAGGTTGTTAGCCTGAGTGATAAACCTATGATGAAGCATGTCGATTTCCTTAAGAATTGTGGGTTCTCCTTGGAACAAATGAGGAAGATGGTCACTGGGTGTCCCCAGTTACTTGCTTTGAATCTTGACATCATGAAACTTAGCTTTGATTTCTTTCAGAAAGAGATGCAAAGGCCTTTGGTTGACTTGGTTGCTTTCCCAGCATTCTTCACTTATGGTCTGGAATCCACCATAAAACCGAGGCATAAGATGGTAACAAAGAGAGGGTTGAAATGCTCTCTTGGATGGCTTCTCAATTGCTCTGATGAGAAGTTTGAGCAACGGATGGACTACGACACTATTGAAATGGATGAGATGGAATCATCGCCATCATTCGACATGAATATTCTCACAGAACCAAGGAGTGATGAGTCAGGTTCAGACTATGATAGTGATGATGAGTATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009303 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0018130 GO:0019438 GO:0019843 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0032501 GO:0032502 GO:0032774 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0042254 GO:0042255 GO:0042793 GO:0042794 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097159 GO:0097659 GO:0098781 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

mTERF

Protein Analysis

520

Amino Acids

58.8

Weight (kDa)

7.62

Isoelectric Point (pI)

43.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
mTERF	PF02536	169 - 477	1.3e-109	mTERF

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02990 AT4G02990
fragaria_vesca	FvH4_2g24160 FvH4_2g24160
malus_domestica	MD03G1271600.v1.1 MD11G1292200.v1.1
prunus_persica	Prupe.8G247800_v2.0.a1
pyrus_communis	pycom03g21610 pycom11g25870
rosa_chinensis	RchiOBHm_Chr6g0291971
rosa_laevigata	RLG00000012074
rosa_multiflora	Rmu_co8409065.1_g000001 Rmu_sc0026994.1_g000002
rosa_roxburghii	Rroxscaffold_7G00175540 Rroxscaffold_7G00178000
rosa_rugosa	Rorug06G0222200
rosa_samantha	Rh6AG335900 Rh6BG343300 Rh6CG349500 Rh6DG336300
rosa_wichuraiana	Rw6G029240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	1 cut(s)	55
AciI	CCGC	3 cut(s)	569, 889, 893
AclWI	GGATC	1 cut(s)	14
AcoI	YGGCCR	1 cut(s)	890
AdeI	CACNNNGTG	1 cut(s)	1212
AfaI	GTAC	2 cut(s)	118, 663
AfiI	CCNNNNNNNGG	2 cut(s)	607, 863
AflII	CTTAAG	1 cut(s)	1163
AgeI	ACCGGT	1 cut(s)	607
AgsI	TTSAA	9 cut(s)	392, 443, 668, 694, 842, 941, 1234, 1384, 1457
AjiI	CACGTC	1 cut(s)	717
AjnI	CCWGG	2 cut(s)	185, 426
AleI	CACNNNNGTG	1 cut(s)	719
AluBI	AGCT	9 cut(s)	15, 39, 82, 361, 376, 456, 697, 1033, 1257
AluI	AGCT	9 cut(s)	15, 39, 82, 361, 376, 456, 697, 1033, 1257
Alw21I	GWGCWC	1 cut(s)	716
Alw26I	GTCTC	2 cut(s)	156, 232
AlwI	GGATC	1 cut(s)	14
AlwNI	CAGNNNCTG	1 cut(s)	622
Ama87I	CYCGRG	1 cut(s)	315
Aor13HI	TCCGGA	1 cut(s)	55
AoxI	GGCC	3 cut(s)	247, 890, 1286
ApeKI	GCWGC	1 cut(s)	474
ArsI	GACNNNNNNTTYG	2 cut(s)	203, 235
AsiGI	ACCGGT	1 cut(s)	607
AspS9I	GGNCC	3 cut(s)	248, 613, 1076
AsuC2I	CCSGG	2 cut(s)	316, 317
AsuHPI	GGTGA	2 cut(s)	538, 826
AsuII	TTCGAA	1 cut(s)	964
AsuNHI	GCTAGC	1 cut(s)	584
AvaI	CYCGRG	1 cut(s)	315
AvaII	GGWCC	2 cut(s)	613, 1076
BaeGI	GKGCMC	1 cut(s)	316
BauI	CACGAG	2 cut(s)	120, 657
BbsI	GAAGAC	1 cut(s)	450
Bbv12I	GWGCWC	1 cut(s)	716
BbvI	GCAGC	1 cut(s)	461
BccI	CCATC	8 cut(s)	359, 679, 1195, 1357, 1392, 1432, 1462, 1489
BciT130I	CCWGG	2 cut(s)	187, 428
BclI	TGATCA	1 cut(s)	816
BcnI	CCSGG	2 cut(s)	316, 317
BcoDI	GTCTC	2 cut(s)	156, 232
BfaI	CTAG	5 cut(s)	273, 470, 585, 777, 873
BfmI	CTRYAG	1 cut(s)	475
BfrI	CTTAAG	1 cut(s)	1163
BisI	GCNGC	3 cut(s)	475, 890, 893
BlsI	GCNGC	3 cut(s)	476, 891, 894
Bme1390I	CCNGG	4 cut(s)	187, 316, 317, 428
Bme18I	GGWCC	2 cut(s)	613, 1076
BmeT110I	CYCGRG	1 cut(s)	315
BmgBI	CACGTC	1 cut(s)	717
BmgT120I	GGNCC	3 cut(s)	248, 613, 1076
BmiI	GGNNCC	2 cut(s)	706, 1077
BmrFI	CCNGG	4 cut(s)	187, 316, 317, 428
BmrI	ACTGGG	2 cut(s)	1213, 1218
BmsI	GCATC	3 cut(s)	61, 1098, 1269
BmtI	GCTAGC	1 cut(s)	588
BmuI	ACTGGG	2 cut(s)	1213, 1218
BpiI	GAAGAC	1 cut(s)	450
Bpu10I	CCTNAGC	1 cut(s)	1029
Bpu14I	TTCGAA	1 cut(s)	964
BpuEI	CTTGAG	3 cut(s)	577, 719, 1040
BpuMI	CCSGG	2 cut(s)	316, 317
BsaI	GGTCTC	1 cut(s)	156
BsaJI	CCNNGG	5 cut(s)	315, 427, 1182, 1352, 1511
BsaWI	WCCGGW	2 cut(s)	55, 607
Bsc4I	CCNNNNNNNGG	2 cut(s)	607, 863
Bse118I	RCCGGY	2 cut(s)	64, 607
Bse1I	ACTGG	5 cut(s)	172, 222, 616, 1213, 1219
BseAI	TCCGGA	1 cut(s)	55
BseBI	CCWGG	2 cut(s)	187, 428
BseDI	CCNNGG	5 cut(s)	315, 427, 1182, 1352, 1511
BseGI	GGATG	4 cut(s)	52, 1403, 1443, 1468
BseLI	CCNNNNNNNGG	2 cut(s)	607, 863
BseMII	CTCAG	4 cut(s)	167, 777, 993, 1118
BseNI	ACTGG	5 cut(s)	172, 222, 616, 1213, 1219
BseRI	GAGGAG	1 cut(s)	932
BseSI	GKGCMC	1 cut(s)	316
BseX3I	CGGCCG	1 cut(s)	890
BseXI	GCAGC	1 cut(s)	461
BseYI	CCCAGC	2 cut(s)	35, 1312
Bsh1285I	CGRYCG	1 cut(s)	893
BshFI	GGCC	3 cut(s)	249, 892, 1288
BshTI	ACCGGT	1 cut(s)	607
BsiEI	CGRYCG	1 cut(s)	893
BsiHKAI	GWGCWC	1 cut(s)	716
BsiHKCI	CYCGRG	1 cut(s)	315
BsiSI	CCGG	4 cut(s)	56, 65, 316, 608
BslFI	GGGAC	1 cut(s)	1200
BslI	CCNNNNNNNGG	2 cut(s)	607, 863
BsmAI	GTCTC	2 cut(s)	156, 232
BsmFI	GGGAC	1 cut(s)	1200
BsmI	GAATGC	3 cut(s)	157, 804, 1316
BsnI	GGCC	3 cut(s)	249, 892, 1288
Bso31I	GGTCTC	1 cut(s)	156
BsoBI	CYCGRG	1 cut(s)	315
Bsp119I	TTCGAA	1 cut(s)	964
Bsp1286I	GDGCHC	2 cut(s)	316, 716
Bsp13I	TCCGGA	1 cut(s)	55
Bsp143I	GATC	2 cut(s)	6, 816
BspACI	CCGC	3 cut(s)	569, 889, 893
BspANI	GGCC	3 cut(s)	249, 892, 1288
BspCNI	CTCAG	4 cut(s)	166, 778, 994, 1119
BspEI	TCCGGA	1 cut(s)	55
BspHI	TCATGA	1 cut(s)	1245
BspLI	GGNNCC	2 cut(s)	706, 1077
BspMAI	CTGCAG	1 cut(s)	479
BspOI	GCTAGC	1 cut(s)	588
BspPI	GGATC	1 cut(s)	14
BspT104I	TTCGAA	1 cut(s)	964
BspTI	CTTAAG	1 cut(s)	1163
BspTNI	GGTCTC	1 cut(s)	156
BsrFI	RCCGGY	2 cut(s)	64, 607
BsrI	ACTGG	5 cut(s)	172, 222, 616, 1213, 1219
BssAI	RCCGGY	2 cut(s)	64, 607
BssECI	CCNNGG	5 cut(s)	315, 427, 1182, 1352, 1511
BssMI	GATC	2 cut(s)	6, 816
BssSI	CACGAG	2 cut(s)	120, 657
BssT1I	CCWWGG	2 cut(s)	1182, 1511
Bst2BI	CACGAG	2 cut(s)	120, 657
Bst2UI	CCWGG	2 cut(s)	187, 428
Bst4CI	ACNGT	2 cut(s)	388, 439
Bst6I	CTCTTC	1 cut(s)	748
BstAFI	CTTAAG	1 cut(s)	1163
BstAPI	GCANNNNNTGC	1 cut(s)	311
BstBI	TTCGAA	1 cut(s)	964
BstC8I	GCNNGC	1 cut(s)	586
BstDEI	CTNAG	6 cut(s)	153, 786, 1002, 1029, 1127, 1253
BstF5I	GGATG	4 cut(s)	52, 1403, 1443, 1468
BstKTI	GATC	2 cut(s)	9, 819
BstMAI	GTCTC	2 cut(s)	156, 232
BstMBI	GATC	2 cut(s)	6, 816
BstMCI	CGRYCG	1 cut(s)	893
BstMWI	GCNNNNNNNGC	2 cut(s)	311, 1313
BstNI	CCWGG	2 cut(s)	187, 428
BstNSI	RCATGY	2 cut(s)	584, 1154
BstSCI	CCNGG	4 cut(s)	185, 314, 315, 426
BstSFI	CTRYAG	1 cut(s)	475
BstSLI	GKGCMC	1 cut(s)	316
BstV1I	GCAGC	1 cut(s)	461
BstV2I	GAAGAC	1 cut(s)	450
BstXI	CCANNNNNNTGG	1 cut(s)	229
BstZI	CGGCCG	1 cut(s)	890
BsuRI	GGCC	3 cut(s)	249, 892, 1288
BtgZI	GCGATG	1 cut(s)	1461
BtrI	CACGTC	1 cut(s)	717
BtsCI	GGATG	4 cut(s)	52, 1403, 1443, 1468
BtsI	GCAGTG	1 cut(s)	484
BtsIMutI	CAGTG	2 cut(s)	484, 1206
Cac8I	GCNNGC	1 cut(s)	586
CaiI	CAGNNNCTG	1 cut(s)	622
CciI	TCATGA	1 cut(s)	1245
CciNI	GCGGCCGC	1 cut(s)	890
Cfr10I	RCCGGY	2 cut(s)	64, 607
Cfr13I	GGNCC	3 cut(s)	248, 613, 1076
Cfr9I	CCCGGG	1 cut(s)	315
CsiI	ACCWGGT	1 cut(s)	185
Csp6I	GTAC	2 cut(s)	117, 662
CspAI	ACCGGT	1 cut(s)	607
CviAII	CATG	8 cut(s)	75, 493, 581, 709, 959, 1151, 1246, 1492
CviQI	GTAC	2 cut(s)	117, 662
DdeI	CTNAG	6 cut(s)	153, 786, 1002, 1029, 1127, 1253
DpnI	GATC	2 cut(s)	8, 818
DpnII	GATC	2 cut(s)	6, 816
DraIII	CACNNNGTG	1 cut(s)	1212
EaeI	YGGCCR	1 cut(s)	890
EagI	CGGCCG	1 cut(s)	890
Eam1104I	CTCTTC	1 cut(s)	748
EarI	CTCTTC	1 cut(s)	748
EclXI	CGGCCG	1 cut(s)	890
Eco130I	CCWWGG	2 cut(s)	1182, 1511
Eco147I	AGGCCT	1 cut(s)	1288
Eco31I	GGTCTC	1 cut(s)	156
Eco32I	GATATC	4 cut(s)	566, 637, 674, 782
Eco47I	GGWCC	2 cut(s)	613, 1076
Eco52I	CGGCCG	1 cut(s)	890
Eco88I	CYCGRG	1 cut(s)	315
EcoO109I	RGGNCCY	1 cut(s)	248
EcoRII	CCWGG	2 cut(s)	185, 426
EcoRV	GATATC	4 cut(s)	566, 637, 674, 782
EcoT14I	CCWWGG	2 cut(s)	1182, 1511
EcoT22I	ATGCAT	1 cut(s)	1561
ErhI	CCWWGG	2 cut(s)	1182, 1511
FaeI	CATG	8 cut(s)	78, 496, 584, 712, 962, 1154, 1249, 1495
FalI	AAGNNNNNCTT	2 cut(s)	960, 992
FaqI	GGGAC	1 cut(s)	1200
FatI	CATG	8 cut(s)	74, 492, 580, 708, 958, 1150, 1245, 1491
FbaI	TGATCA	1 cut(s)	816
Fnu4HI	GCNGC	3 cut(s)	475, 890, 893
FokI	GGATG	4 cut(s)	39, 1410, 1450, 1475
Fsp4HI	GCNGC	3 cut(s)	475, 890, 893
FspBI	CTAG	5 cut(s)	273, 470, 585, 777, 873
GluI	GCNGC	3 cut(s)	475, 890, 893
GsaI	CCCAGC	2 cut(s)	39, 1316
HaeIII	GGCC	3 cut(s)	249, 892, 1288
HapII	CCGG	4 cut(s)	56, 65, 316, 608
Hin1II	CATG	8 cut(s)	78, 496, 584, 712, 962, 1154, 1249, 1495
HincII	GTYRAC	3 cut(s)	598, 1043, 1297
HindII	GTYRAC	3 cut(s)	598, 1043, 1297
HindIII	AAGCTT	2 cut(s)	695, 1031
HpaII	CCGG	4 cut(s)	56, 65, 316, 608
HphI	GGTGA	2 cut(s)	538, 826
Hpy166II	GTNNAC	5 cut(s)	598, 662, 1043, 1052, 1297
Hpy188I	TCNGA	5 cut(s)	163, 237, 1272, 1417, 1534
Hpy8I	GTNNAC	5 cut(s)	598, 662, 1043, 1052, 1297
Hpy99I	CGWCG	1 cut(s)	721
HpyAV	CCTTC	1 cut(s)	261
HpyCH4III	ACNGT	2 cut(s)	388, 439
HpyCH4IV	ACGT	1 cut(s)	716
HpyCH4V	TGCA	9 cut(s)	52, 74, 477, 605, 625, 749, 992, 1282, 1559
HpyF10VI	GCNNNNNNNGC	2 cut(s)	311, 1313
HpyF3I	CTNAG	6 cut(s)	153, 786, 1002, 1029, 1127, 1253
HpySE526I	ACGT	1 cut(s)	716
Hsp92II	CATG	8 cut(s)	78, 496, 584, 712, 962, 1154, 1249, 1495
Kpn2I	TCCGGA	1 cut(s)	55
Ksp22I	TGATCA	1 cut(s)	816
Kzo9I	GATC	2 cut(s)	6, 816
LmnI	GCTCC	2 cut(s)	373, 403
Lsp1109I	GCAGC	1 cut(s)	461
LweI	GCATC	3 cut(s)	61, 1098, 1269
MabI	ACCWGGT	1 cut(s)	185
MaeI	CTAG	5 cut(s)	273, 470, 585, 777, 873
MaeII	ACGT	1 cut(s)	716
MaeIII	GTNAC	6 cut(s)	25, 60, 382, 1204, 1221, 1366
MalI	GATC	2 cut(s)	8, 818
MboI	GATC	2 cut(s)	6, 816
MfeI	CAATTG	1 cut(s)	1408
MhlI	GDGCHC	2 cut(s)	316, 716
MluCI	AATT	8 cut(s)	86, 339, 521, 680, 1014, 1065, 1168, 1408
MlyI	GAGTC	2 cut(s)	1048, 1532
MmeI	TCCRAC	1 cut(s)	351
Mph1103I	ATGCAT	1 cut(s)	1561
MroI	TCCGGA	1 cut(s)	55
MseI	TTAA	3 cut(s)	89, 773, 1164
MslI	CAYNNNNRTG	2 cut(s)	73, 719
MspCI	CTTAAG	1 cut(s)	1163
MspI	CCGG	4 cut(s)	56, 65, 316, 608
MspR9I	CCNGG	4 cut(s)	187, 316, 317, 428
MunI	CAATTG	1 cut(s)	1408
Mva1269I	GAATGC	3 cut(s)	157, 804, 1316
MvaI	CCWGG	2 cut(s)	187, 428
MwoI	GCNNNNNNNGC	2 cut(s)	311, 1313
NciI	CCSGG	2 cut(s)	316, 317
NdeII	GATC	2 cut(s)	6, 816
NheI	GCTAGC	1 cut(s)	584
NlaIII	CATG	8 cut(s)	78, 496, 584, 712, 962, 1154, 1249, 1495
NlaIV	GGNNCC	2 cut(s)	706, 1077
NmuCI	GTSAC	1 cut(s)	1204
NotI	GCGGCCGC	1 cut(s)	890
NsiI	ATGCAT	1 cut(s)	1561
NspI	RCATGY	2 cut(s)	584, 1154
NspV	TTCGAA	1 cut(s)	964
OliI	CACNNNNGTG	1 cut(s)	719
PagI	TCATGA	1 cut(s)	1245
PceI	AGGCCT	1 cut(s)	1288
PcsI	WCGNNNNNNNCGW	1 cut(s)	112
PctI	GAATGC	3 cut(s)	157, 804, 1316
PfeI	GAWTC	9 cut(s)	108, 197, 496, 690, 941, 971, 1234, 1337, 1472
PflFI	GACNNNGTC	1 cut(s)	217
PinAI	ACCGGT	1 cut(s)	607
PkrI	GCNGC	3 cut(s)	476, 891, 894
PleI	GAGTC	2 cut(s)	1047, 1531
PpsI	GAGTC	2 cut(s)	1047, 1531
Psp6I	CCWGG	2 cut(s)	185, 426
PspFI	CCCAGC	2 cut(s)	35, 1312
PspGI	CCWGG	2 cut(s)	185, 426
PspN4I	GGNNCC	2 cut(s)	706, 1077
PspPI	GGNCC	3 cut(s)	248, 613, 1076
PstI	CTGCAG	1 cut(s)	479
PstNI	CAGNNNCTG	1 cut(s)	622
PsyI	GACNNNGTC	1 cut(s)	217
RsaI	GTAC	2 cut(s)	118, 663
RsaNI	GTAC	2 cut(s)	117, 662
RseI	CAYNNNNRTG	2 cut(s)	73, 719
SaqAI	TTAA	3 cut(s)	89, 773, 1164
SatI	GCNGC	3 cut(s)	475, 890, 893
Sau3AI	GATC	2 cut(s)	6, 816
Sau96I	GGNCC	3 cut(s)	248, 613, 1076
SchI	GAGTC	2 cut(s)	1048, 1532
ScrFI	CCNGG	4 cut(s)	187, 316, 317, 428
SduI	GDGCHC	2 cut(s)	316, 716
SexAI	ACCWGGT	1 cut(s)	185
SfaNI	GCATC	3 cut(s)	61, 1098, 1269
SfcI	CTRYAG	1 cut(s)	475
SfuI	TTCGAA	1 cut(s)	964
SgrAI	CRCCGGYG	1 cut(s)	607
SinI	GGWCC	2 cut(s)	613, 1076
SmaI	CCCGGG	1 cut(s)	317
SmiMI	CAYNNNNRTG	2 cut(s)	73, 719
SmlI	CTYRAG	4 cut(s)	556, 698, 1055, 1163
SmoI	CTYRAG	4 cut(s)	556, 698, 1055, 1163
Sse9I	AATT	8 cut(s)	86, 339, 521, 680, 1014, 1065, 1168, 1408
SseBI	AGGCCT	1 cut(s)	1288
SsiI	CCGC	3 cut(s)	569, 889, 893
SspI	AATATT	2 cut(s)	937, 1498
SspMI	CTAG	5 cut(s)	273, 470, 585, 777, 873
StuI	AGGCCT	1 cut(s)	1288
StyD4I	CCNGG	4 cut(s)	185, 314, 315, 426
StyI	CCWWGG	2 cut(s)	1182, 1511
TaaI	ACNGT	2 cut(s)	388, 439
TaiI	ACGT	1 cut(s)	719
TaqI	TCGA	4 cut(s)	106, 964, 1155, 1488
TasI	AATT	8 cut(s)	86, 339, 521, 680, 1014, 1065, 1168, 1408
TatI	WGTACW	1 cut(s)	661
TauI	GCSGC	2 cut(s)	892, 895
TfiI	GAWTC	9 cut(s)	108, 197, 496, 690, 941, 971, 1234, 1337, 1472
Tru1I	TTAA	3 cut(s)	89, 773, 1164
Tru9I	TTAA	3 cut(s)	89, 773, 1164
TscAI	CASTG	2 cut(s)	484, 1213
TseFI	GTSAC	1 cut(s)	1204
TseI	GCWGC	1 cut(s)	474
Tsp45I	GTSAC	1 cut(s)	1204
TspDTI	ATGAA	7 cut(s)	189, 243, 302, 947, 1160, 1262, 1508
TspGWI	ACGGA	1 cut(s)	1450
TspMI	CCCGGG	1 cut(s)	315
TspRI	CASTG	2 cut(s)	484, 1213
Tth111I	GACNNNGTC	1 cut(s)	217
Vha464I	CTTAAG	1 cut(s)	1163
VpaK11BI	GGWCC	2 cut(s)	613, 1076
XceI	RCATGY	2 cut(s)	584, 1154
XmaI	CCCGGG	1 cut(s)	315
XspI	CTAG	5 cut(s)	273, 470, 585, 777, 873
Zsp2I	ATGCAT	1 cut(s)	1561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.