MD11G1292200.v1.1
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
41186618 .. 41188974
2357 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1292200.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGAAGATCAGATGCAATGCTGGTGTTACGAAACCCAGCTTTTTGCTTGTGCATTCAGAATTACCGGCGCTTACATCTCTTAAGCCCCAATTCACTTCTATATCGACGCTTTGCAATCGAGAGAAGTTGATAGGGTTGATAACAAGGTGTCAGTATTCTGTTTCTGGTAGAAGGTCAGCAACCAGTTATAAGGGTTCATCGGTTTCAAAGACAAACACCAGTCTTATAGGTAGGAGGGATAGAGGTTCTTCATCCTTATATAGTCGTCCTAGTCTGTTAGAGATGAAGAATGAAAGGATGGAAATTCGTGCCCGGGTTTATGATTTCTTGCGAGGAATTGGTATTGTCCCTGATGAGCTTGATGGATTGGAGCTTCCTGTTACAGTCGAAGTTATGAGGGAACGTGTGGATTTTCTTCACAATCTGGGACTTACAATCGAAGACATTAACAACTATCCACTTGTTCTAGGCTGTAGTGTGAAGAAAAACATGATTCCTGTGCTCGATTATCTTGGGAAGTTGGGTGTTAGGAAATCCACATTCACAGAGTTCTTGAGAAGATATCCACAAGTCCTGCATGCTAGTGTTGTTATTGACCTTTCACCGGTGGTCAAGTATCTTCAAGGAATGGATATCAAACCTGATGACATTCCTCAGGTTCTTGAGAAATATCCAGAAGTGCTGGGATTCAAGCTCGAGGGGACCATGAGCACTTCGGTGGCTTATTTAGTTGGAATTGGGGTCGCAAGAAGGGAGATTGGTGGAGTTTTAACTAGATACCCTGAGATTTTAGGGATGCGTGTAGGTAGGGTGATCAAGCCTTTTGTTGAGTTTCTCGAAAAGCTGGGTATTCCTAGACTAGGTGTGGCTAGACTGATAGAGAAGCGTCCTCACATCCTTGGGTTTGGATTGGAGGAGAGAGTGAAACCGAATATTCAATCCCTTTTGGAGTTTTGTGTTCGAGAAGAATCACTTGCGTCTGTAGTGGCACAGTATCCTGAGATCATAGGAATTGATCTCAAGCCTAAGCTTCTCAGTCAACAAAGTTTGATCAAGTCGGTAATTGATTTGGATCCCGAGGACTTTGGCAGAGTTGTTGAGAAGATGCCTCAAGTTGTTAGCCTCAGTGATAGACCTATGATGAAGCATGCTGATTTCCTTAAGAATTGTGGATTTTCCTTGGAGCAAGTGAGGAAGATGGTTGTCGGGTGTCCCCAGTTGCTTGCCTTGAATCTGGACATCATGAAACTCAGCTTTGATTTCTTTCAAACGGAGATACAAAGGCCTTTGGATGACTTGGTTGCTTTCCCAGCATTCTTTACTTATGGTCTAGAATCGACTATAAAACCAAGACATAAGATGGTTTCAAAGAAAGCGTTGAAATGCTCCCTTGGATGGCTTCTCAATTGCTCTGATGAAAAGTTTGCACAACGGATGGACTACGACACCATTGACATGGAGGAGATGGAATCCTTGCCATCATTTGATATGAATACGCTCACAGAACCAAGGAGCGACGATTCAGGTTCTGAGTACGATGATGATAGCGATGACGATTATGTATAA

Protein Analysis

522

Amino Acids

58.84

Weight (kDa)

6.39

Isoelectric Point (pI)

42.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 168 - 476 1.4e-108 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 189
AclWI GGATC 2 cut(s) 1067, 1080
AcsI RAATTY 1 cut(s) 303
AfaI GTAC 1 cut(s) 1535
AfiI CCNNNNNNNGG 3 cut(s) 604, 860, 1395
AflII CTTAAG 2 cut(s) 80, 1160
AflIII ACRYGT 1 cut(s) 403
AgeI ACCGGT 1 cut(s) 604
AgsI TTSAA 8 cut(s) 207, 623, 691, 938, 1231, 1268, 1368, 1381
AleI CACNNNNGTG 1 cut(s) 716
AluBI AGCT 7 cut(s) 39, 358, 373, 694, 844, 1030, 1254
AluI AGCT 7 cut(s) 39, 358, 373, 694, 844, 1030, 1254
Alw21I GWGCWC 2 cut(s) 504, 713
AlwI GGATC 2 cut(s) 1067, 1080
AlwNI CAGNNNCTG 1 cut(s) 1529
Ama87I CYCGRG 3 cut(s) 312, 695, 1076
AoxI GGCC 1 cut(s) 1283
ApoI RAATTY 1 cut(s) 303
AsiGI ACCGGT 1 cut(s) 604
AspLEI GCGC 1 cut(s) 70
AspS9I GGNCC 1 cut(s) 702
AsuC2I CCSGG 2 cut(s) 313, 314
AsuHPI GGTGA 2 cut(s) 594, 823
AvaI CYCGRG 3 cut(s) 312, 695, 1076
AvaII GGWCC 1 cut(s) 702
AxyI CCTNAGG 1 cut(s) 654
BaeGI GKGCMC 1 cut(s) 313
BamHI GGATCC 1 cut(s) 1072
BbsI GAAGAC 1 cut(s) 447
Bbv12I GWGCWC 2 cut(s) 504, 713
BccI CCATC 8 cut(s) 292, 356, 1192, 1354, 1389, 1429, 1459, 1486
BciVI GTATCC 1 cut(s) 1005
BclI TGATCA 2 cut(s) 813, 1050
BcnI CCSGG 2 cut(s) 313, 314
BfaI CTAG 8 cut(s) 270, 467, 582, 774, 855, 860, 870, 1331
BfmI CTRYAG 2 cut(s) 472, 981
BfoI RGCGCY 1 cut(s) 71
BfrI CTTAAG 2 cut(s) 80, 1160
BfuI GTATCC 1 cut(s) 1005
Bme1390I CCNGG 2 cut(s) 313, 314
Bme18I GGWCC 1 cut(s) 702
BmeT110I CYCGRG 3 cut(s) 312, 695, 1076
BmgT120I GGNCC 1 cut(s) 702
BmiI GGNNCC 2 cut(s) 703, 1074
BmrFI CCNGG 2 cut(s) 313, 314
BmrI ACTGGG 1 cut(s) 1210
BmsI GCATC 3 cut(s) 2, 786, 1095
BmuI ACTGGG 1 cut(s) 1210
BpiI GAAGAC 1 cut(s) 447
Bpu10I CCTNAGC 1 cut(s) 1026
BpuEI CTTGAG 4 cut(s) 574, 683, 1004, 1095
BpuMI CCSGG 2 cut(s) 313, 314
BsaBI GATNNNNATC 1 cut(s) 1071
BsaJI CCNNGG 6 cut(s) 312, 898, 1077, 1179, 1390, 1508
BsaWI WCCGGW 1 cut(s) 604
Bsc4I CCNNNNNNNGG 3 cut(s) 604, 860, 1395
Bse118I RCCGGY 2 cut(s) 64, 604
Bse1I ACTGG 3 cut(s) 183, 219, 1216
Bse21I CCTNAGG 1 cut(s) 654
Bse3DI GCAATG 1 cut(s) 22
Bse8I GATNNNNATC 1 cut(s) 1071
BseDI CCNNGG 6 cut(s) 312, 898, 1077, 1179, 1390, 1508
BseGI GGATG 7 cut(s) 251, 303, 801, 894, 1297, 1400, 1440
BseJI GATNNNNATC 1 cut(s) 1071
BseLI CCNNNNNNNGG 3 cut(s) 604, 860, 1395
BseMI GCAATG 1 cut(s) 22
BseMII CTCAG 7 cut(s) 668, 774, 990, 1048, 1138, 1264, 1521
BseNI ACTGG 3 cut(s) 183, 219, 1216
BseRI GAGGAG 2 cut(s) 929, 1475
BseSI GKGCMC 1 cut(s) 313
BseYI CCCAGC 4 cut(s) 35, 682, 844, 1309
BshFI GGCC 1 cut(s) 1285
BshTI ACCGGT 1 cut(s) 604
BsiHKAI GWGCWC 2 cut(s) 504, 713
BsiHKCI CYCGRG 3 cut(s) 312, 695, 1076
BsiSI CCGG 3 cut(s) 65, 313, 605
BslFI GGGAC 4 cut(s) 332, 441, 715, 1197
BslI CCNNNNNNNGG 3 cut(s) 604, 860, 1395
BsmFI GGGAC 4 cut(s) 332, 441, 715, 1197
BsmI GAATGC 2 cut(s) 52, 1313
BsnI GGCC 1 cut(s) 1285
BsoBI CYCGRG 3 cut(s) 312, 695, 1076
Bsp1286I GDGCHC 3 cut(s) 313, 504, 713
Bsp143I GATC 6 cut(s) 6, 813, 1002, 1015, 1050, 1072
BspANI GGCC 1 cut(s) 1285
BspCNI CTCAG 7 cut(s) 667, 775, 991, 1047, 1137, 1263, 1522
BspHI TCATGA 1 cut(s) 1242
BspLI GGNNCC 2 cut(s) 703, 1074
BspPI GGATC 2 cut(s) 1067, 1080
BspTI CTTAAG 2 cut(s) 80, 1160
BsrDI GCAATG 1 cut(s) 22
BsrFI RCCGGY 2 cut(s) 64, 604
BsrI ACTGG 3 cut(s) 183, 219, 1216
BssAI RCCGGY 2 cut(s) 64, 604
BssECI CCNNGG 6 cut(s) 312, 898, 1077, 1179, 1390, 1508
BssMI GATC 6 cut(s) 6, 813, 1002, 1015, 1050, 1072
BssT1I CCWWGG 4 cut(s) 898, 1179, 1390, 1508
Bst4CI ACNGT 2 cut(s) 385, 993
BstAFI CTTAAG 2 cut(s) 80, 1160
BstC8I GCNNGC 3 cut(s) 579, 1149, 1224
BstDEI CTNAG 8 cut(s) 654, 783, 999, 1026, 1034, 1124, 1250, 1530
BstENI CCTNNNNNAGG 1 cut(s) 858
BstF5I GGATG 7 cut(s) 251, 303, 801, 894, 1297, 1400, 1440
BstH2I RGCGCY 1 cut(s) 71
BstHHI GCGC 1 cut(s) 70
BstKTI GATC 6 cut(s) 9, 816, 1005, 1018, 1053, 1075
BstMBI GATC 6 cut(s) 6, 813, 1002, 1015, 1050, 1072
BstMWI GCNNNNNNNGC 1 cut(s) 1310
BstNSI RCATGY 2 cut(s) 581, 1151
BstSCI CCNGG 2 cut(s) 311, 312
BstSFI CTRYAG 2 cut(s) 472, 981
BstSLI GKGCMC 1 cut(s) 313
BstV2I GAAGAC 1 cut(s) 447
BstX2I RGATCY 1 cut(s) 1072
BstXI CCANNNNNNTGG 1 cut(s) 1456
BstYI RGATCY 1 cut(s) 1072
Bsu36I CCTNAGG 1 cut(s) 654
BsuI GTATCC 1 cut(s) 1005
BsuRI GGCC 1 cut(s) 1285
BtsCI GGATG 7 cut(s) 251, 303, 801, 894, 1297, 1400, 1440
BtsIMutI CAGTG 1 cut(s) 1132
Cac8I GCNNGC 3 cut(s) 579, 1149, 1224
CaiI CAGNNNCTG 1 cut(s) 1529
CciI TCATGA 1 cut(s) 1242
CfoI GCGC 1 cut(s) 70
Cfr10I RCCGGY 2 cut(s) 64, 604
Cfr13I GGNCC 1 cut(s) 702
Cfr9I CCCGGG 1 cut(s) 312
CseI GACGC 3 cut(s) 115, 875, 966
Csp6I GTAC 1 cut(s) 1534
CspAI ACCGGT 1 cut(s) 604
CviAII CATG 6 cut(s) 490, 578, 706, 1148, 1243, 1456
CviQI GTAC 1 cut(s) 1534
DdeI CTNAG 8 cut(s) 654, 783, 999, 1026, 1034, 1124, 1250, 1530
DpnI GATC 6 cut(s) 8, 815, 1004, 1017, 1052, 1074
DpnII GATC 6 cut(s) 6, 813, 1002, 1015, 1050, 1072
Eco130I CCWWGG 4 cut(s) 898, 1179, 1390, 1508
Eco147I AGGCCT 1 cut(s) 1285
Eco32I GATATC 2 cut(s) 563, 634
Eco47I GGWCC 1 cut(s) 702
Eco81I CCTNAGG 1 cut(s) 654
Eco88I CYCGRG 3 cut(s) 312, 695, 1076
EcoNI CCTNNNNNAGG 1 cut(s) 858
EcoRV GATATC 2 cut(s) 563, 634
EcoT14I CCWWGG 4 cut(s) 898, 1179, 1390, 1508
ErhI CCWWGG 4 cut(s) 898, 1179, 1390, 1508
FaeI CATG 6 cut(s) 493, 581, 709, 1151, 1246, 1459
FalI AAGNNNNNCTT 2 cut(s) 957, 989
FaqI GGGAC 4 cut(s) 332, 441, 715, 1197
FatI CATG 6 cut(s) 489, 577, 705, 1147, 1242, 1455
FbaI TGATCA 2 cut(s) 813, 1050
FokI GGATG 7 cut(s) 238, 310, 808, 881, 1304, 1407, 1447
FspBI CTAG 8 cut(s) 270, 467, 582, 774, 855, 860, 870, 1331
GlaI GCGC 1 cut(s) 69
GsaI CCCAGC 4 cut(s) 39, 686, 848, 1313
HaeII RGCGCY 1 cut(s) 71
HaeIII GGCC 1 cut(s) 1285
HapII CCGG 3 cut(s) 65, 313, 605
HgaI GACGC 3 cut(s) 115, 875, 966
HhaI GCGC 1 cut(s) 70
Hin1II CATG 6 cut(s) 493, 581, 709, 1151, 1246, 1459
Hin6I GCGC 1 cut(s) 68
HinP1I GCGC 1 cut(s) 68
HincII GTYRAC 1 cut(s) 1040
HindII GTYRAC 1 cut(s) 1040
HindIII AAGCTT 1 cut(s) 1028
HinfI GANTC 7 cut(s) 493, 687, 968, 1231, 1334, 1469, 1520
HpaII CCGG 3 cut(s) 65, 313, 605
HphI GGTGA 2 cut(s) 594, 823
Hpy166II GTNNAC 1 cut(s) 1040
Hpy188I TCNGA 4 cut(s) 11, 58, 1414, 1531
Hpy8I GTNNAC 1 cut(s) 1040
Hpy99I CGWCG 2 cut(s) 109, 1520
HpyAV CCTTC 2 cut(s) 165, 744
HpyCH4III ACNGT 2 cut(s) 385, 993
HpyCH4IV ACGT 1 cut(s) 403
HpyCH4V TGCA 5 cut(s) 15, 52, 114, 577, 1427
HpyF10VI GCNNNNNNNGC 1 cut(s) 1310
HpyF3I CTNAG 8 cut(s) 654, 783, 999, 1026, 1034, 1124, 1250, 1530
HpySE526I ACGT 1 cut(s) 403
Hsp92II CATG 6 cut(s) 493, 581, 709, 1151, 1246, 1459
HspAI GCGC 1 cut(s) 68
Ksp22I TGATCA 2 cut(s) 813, 1050
Kzo9I GATC 6 cut(s) 6, 813, 1002, 1015, 1050, 1072
LmnI GCTCC 4 cut(s) 370, 1183, 1391, 1512
LweI GCATC 3 cut(s) 2, 786, 1095
MaeI CTAG 8 cut(s) 270, 467, 582, 774, 855, 860, 870, 1331
MaeII ACGT 1 cut(s) 403
MaeIII GTNAC 2 cut(s) 25, 379
MalI GATC 6 cut(s) 8, 815, 1004, 1017, 1052, 1074
MboI GATC 6 cut(s) 6, 813, 1002, 1015, 1050, 1072
MfeI CAATTG 1 cut(s) 1405
MflI RGATCY 1 cut(s) 1072
MhlI GDGCHC 3 cut(s) 313, 504, 713
MluCI AATT 9 cut(s) 59, 89, 303, 336, 735, 1011, 1062, 1165, 1405
MmeI TCCRAC 1 cut(s) 712
MseI TTAA 4 cut(s) 81, 447, 770, 1161
MslI CAYNNNNRTG 3 cut(s) 582, 716, 1454
MspCI CTTAAG 2 cut(s) 80, 1160
MspI CCGG 3 cut(s) 65, 313, 605
MspR9I CCNGG 2 cut(s) 313, 314
MunI CAATTG 1 cut(s) 1405
Mva1269I GAATGC 2 cut(s) 52, 1313
MwoI GCNNNNNNNGC 1 cut(s) 1310
NciI CCSGG 2 cut(s) 313, 314
NdeII GATC 6 cut(s) 6, 813, 1002, 1015, 1050, 1072
NlaIII CATG 6 cut(s) 493, 581, 709, 1151, 1246, 1459
NlaIV GGNNCC 2 cut(s) 703, 1074
NspI RCATGY 2 cut(s) 581, 1151
OliI CACNNNNGTG 1 cut(s) 716
PaeI GCATGC 2 cut(s) 581, 1151
PaeR7I CTCGAG 1 cut(s) 695
PagI TCATGA 1 cut(s) 1242
PceI AGGCCT 1 cut(s) 1285
PctI GAATGC 2 cut(s) 52, 1313
PfeI GAWTC 7 cut(s) 493, 687, 968, 1231, 1334, 1469, 1520
PinAI ACCGGT 1 cut(s) 604
PsiI TTATAA 1 cut(s) 189
PspFI CCCAGC 4 cut(s) 35, 682, 844, 1309
PspN4I GGNNCC 2 cut(s) 703, 1074
PspPI GGNCC 1 cut(s) 702
PspXI VCTCGAGB 1 cut(s) 695
PstNI CAGNNNCTG 1 cut(s) 1529
PsuI RGATCY 1 cut(s) 1072
RsaI GTAC 1 cut(s) 1535
RsaNI GTAC 1 cut(s) 1534
RseI CAYNNNNRTG 3 cut(s) 582, 716, 1454
SaqAI TTAA 4 cut(s) 81, 447, 770, 1161
Sau3AI GATC 6 cut(s) 6, 813, 1002, 1015, 1050, 1072
Sau96I GGNCC 1 cut(s) 702
ScrFI CCNGG 2 cut(s) 313, 314
SduI GDGCHC 3 cut(s) 313, 504, 713
SfaNI GCATC 3 cut(s) 2, 786, 1095
SfcI CTRYAG 2 cut(s) 472, 981
Sfr274I CTCGAG 1 cut(s) 695
SgrAI CRCCGGYG 1 cut(s) 604
SinI GGWCC 1 cut(s) 702
SlaI CTCGAG 1 cut(s) 695
SmaI CCCGGG 1 cut(s) 314
SmiMI CAYNNNNRTG 3 cut(s) 582, 716, 1454
SmlI CTYRAG 7 cut(s) 80, 553, 662, 695, 1019, 1110, 1160
SmoI CTYRAG 7 cut(s) 80, 553, 662, 695, 1019, 1110, 1160
SphI GCATGC 2 cut(s) 581, 1151
Sse9I AATT 9 cut(s) 59, 89, 303, 336, 735, 1011, 1062, 1165, 1405
SseBI AGGCCT 1 cut(s) 1285
SspI AATATT 1 cut(s) 934
SspMI CTAG 8 cut(s) 270, 467, 582, 774, 855, 860, 870, 1331
StuI AGGCCT 1 cut(s) 1285
StyD4I CCNGG 2 cut(s) 311, 312
StyI CCWWGG 4 cut(s) 898, 1179, 1390, 1508
TaaI ACNGT 2 cut(s) 385, 993
TaiI ACGT 1 cut(s) 406
TaqI TCGA 9 cut(s) 104, 118, 387, 438, 504, 696, 837, 961, 1337
TasI AATT 9 cut(s) 59, 89, 303, 336, 735, 1011, 1062, 1165, 1405
TfiI GAWTC 7 cut(s) 493, 687, 968, 1231, 1334, 1469, 1520
Tru1I TTAA 4 cut(s) 81, 447, 770, 1161
Tru9I TTAA 4 cut(s) 81, 447, 770, 1161
TscAI CASTG 1 cut(s) 1132
TspDTI ATGAA 9 cut(s) 17, 186, 240, 299, 306, 1157, 1259, 1431, 1505
TspGWI ACGGA 2 cut(s) 1286, 1447
TspMI CCCGGG 1 cut(s) 312
TspRI CASTG 1 cut(s) 1132
Vha464I CTTAAG 2 cut(s) 80, 1160
VpaK11BI GGWCC 1 cut(s) 702
XagI CCTNNNNNAGG 1 cut(s) 858
XapI RAATTY 1 cut(s) 303
XbaI TCTAGA 1 cut(s) 1330
XceI RCATGY 2 cut(s) 581, 1151
XhoI CTCGAG 1 cut(s) 695
XmaI CCCGGG 1 cut(s) 312
XspI CTAG 8 cut(s) 270, 467, 582, 774, 855, 860, 870, 1331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.