MD03G1271600.v1.1
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
35480971 .. 35483318
2348 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1271600.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGAAGGTTAGATGCTATGCTGGTATTACGAAACCCAGCTTTTTGCTTGTGCATTCAGAGTTACCGGTATTTACATCTCTTAAGCCCGAATTCGATTCTATATCCACGCTTTGCAACCGAGAGAAGTTGATTCGGTTGATAACAAGGTGTCAGTATTCTGTTTCTGGTAGAAGGTCAGAAAGCAGTTATAAGGATTCGTCGGTTTCAAATCCAAACACCACTCGTTTAGGTAGGAGAGAAAGAGGTTCTTCATCCTTATATAGTCGTCCTAGTCTGTTAGATATGAAGAATGAAAGGATGGAAAATCGTGCCCGGGTTTATGATTTCTTGCGAGGAATTGGTATTGTCCCTGATGAGCTTGATGGATTGGAGCTTCCTGTTACAGTCGAAGTTATGAGGGAACGTGTGGATTTTCTTCACAATCTGGGGCTTACAATCGAAGACATTAACAACTATCCACTTGTTCTAGGCTGCAGTGTGAAGAAAAACATGATTCCTGTGCTCGATTATCTTGGGAAGTTGGGTGTTAGGAAATCCACATTCACAGAGTTCTTGAGAAGATATCCACAAGTCCTGCATGCTAGTGTTGTTATTGATCTTTCACCAGTGATCAAGTATCTTCAAGGAATGGATATCAAACCCGATGACATTCCTCGGGTTCTTGAGAAATATCCAGAAGTGCTGGGATTCAAGCTTGAGGGGACCATGAGCACTTCAGTGGCTTACTTAGTTGGAATTGGGGTTGCAAGAAGGGAGATTGGCGGAGTTTTAACTAGATACCCGGAGATTTTAGGGATGCGTGTTGGTAAGGTGATCAAGCCATTTGTTGAGTATCTTGAAAAGTTGGGTATTCCAAGACTAGGTGTGGCTAGGCTGATAGAAAAGCGGCCTCACATCCTTGGGTTTGGATTAGAGGAGAGGGTGAAACCGAATATTCAATCCCTTTTGGAGTTTTGCGTTCGAGAAGAATCACTTGCTTCTGTAGTGGCACAATATCCTGAGATCATAGGAATTGATCTCAAGCCTAAGCTTCTCAGTCAACAAAGTTCACTCAAGTCGGTAATTGATTTGGATCCCGAGGACTTTGGCAGAGTTGTTGAGAAGATGCCTCAGGTTGTTAGCCTCAGTGATAGACCTATGATGAAGCATGTCGATTTCCTTAAGAATTGTGGATTTTCCTTGGAGCAAGTGAGGAAGATGGTCGTTGGGTGTCCCCAGTTGCTTGCCTTGAATCTCGACATCATGAAACTTAGCTTTGATTTCTTTCAAACAGAGATGCAAAGGCCTTTGGATGACTTGGTTGCTTTCCCAGCATTCTTTACTTATGGTCTGGATTCGACCATAAAACCAAGACATAAGATGGTTTCAAAGAAAGGGTTGAAATGCTCCCTCGGATGGCTTCTCAACTGCTCCGATGAAAAGTTTGCGCAACGAATGGACTACGACACTATTGACATGGAGGAGATGGAATCATTACCGTCATTTGATATGAATACGCTCACAGAACCAAGGAGCGACAATTCAGGTTCTGACTACGATGATGATAGCGATGACGATTATGTATAG

Protein Analysis

522

Amino Acids

59.22

Weight (kDa)

6.2

Isoelectric Point (pI)

43.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 168 - 476 9.1e-111 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 189
Acc16I TGCGCA 1 cut(s) 1428
AciI CCGC 2 cut(s) 762, 886
AclWI GGATC 2 cut(s) 1067, 1080
AcsI RAATTY 1 cut(s) 89
AcuI CTGAAG 1 cut(s) 699
AfiI CCNNNNNNNGG 2 cut(s) 860, 1395
AflII CTTAAG 2 cut(s) 80, 1160
AflIII ACRYGT 1 cut(s) 403
AgeI ACCGGT 1 cut(s) 64
AgsI TTSAA 9 cut(s) 207, 623, 691, 839, 938, 1231, 1268, 1368, 1381
AleI CACNNNNGTG 1 cut(s) 716
AluBI AGCT 6 cut(s) 39, 358, 373, 694, 1030, 1254
AluI AGCT 6 cut(s) 39, 358, 373, 694, 1030, 1254
Alw21I GWGCWC 2 cut(s) 504, 713
AlwI GGATC 2 cut(s) 1067, 1080
AlwNI CAGNNNCTG 1 cut(s) 1529
Ama87I CYCGRG 3 cut(s) 312, 654, 1076
AoxI GGCC 2 cut(s) 887, 1283
ApeKI GCWGC 1 cut(s) 471
ApoI RAATTY 1 cut(s) 89
AsiGI ACCGGT 1 cut(s) 64
AspLEI GCGC 1 cut(s) 1429
AspS9I GGNCC 1 cut(s) 702
AsuC2I CCSGG 3 cut(s) 313, 314, 782
AsuHPI GGTGA 3 cut(s) 594, 823, 934
AvaI CYCGRG 3 cut(s) 312, 654, 1076
AvaII GGWCC 1 cut(s) 702
AxyI CCTNAGG 1 cut(s) 1110
BaeGI GKGCMC 1 cut(s) 313
BamHI GGATCC 1 cut(s) 1072
BbsI GAAGAC 1 cut(s) 447
Bbv12I GWGCWC 2 cut(s) 504, 713
BbvI GCAGC 1 cut(s) 458
BccI CCATC 6 cut(s) 292, 356, 1192, 1354, 1389, 1459
BclI TGATCA 2 cut(s) 609, 813
BcnI CCSGG 3 cut(s) 313, 314, 782
BfaI CTAG 6 cut(s) 270, 467, 582, 774, 860, 870
BfmI CTRYAG 2 cut(s) 472, 981
BfrI CTTAAG 2 cut(s) 80, 1160
BisI GCNGC 2 cut(s) 472, 887
BlsI GCNGC 2 cut(s) 473, 888
Bme1390I CCNGG 3 cut(s) 313, 314, 782
Bme18I GGWCC 1 cut(s) 702
BmeT110I CYCGRG 3 cut(s) 312, 654, 1076
BmgT120I GGNCC 1 cut(s) 702
BmiI GGNNCC 2 cut(s) 703, 1074
BmrFI CCNGG 3 cut(s) 313, 314, 782
BmrI ACTGGG 1 cut(s) 1210
BmsI GCATC 4 cut(s) 2, 786, 1095, 1266
BmuI ACTGGG 1 cut(s) 1210
BpiI GAAGAC 1 cut(s) 447
Bpu10I CCTNAGC 1 cut(s) 1026
BpuEI CTTGAG 5 cut(s) 574, 683, 716, 1004, 1037
BpuMI CCSGG 3 cut(s) 313, 314, 782
BsaBI GATNNNNATC 1 cut(s) 1071
BsaJI CCNNGG 7 cut(s) 312, 653, 898, 1077, 1179, 1390, 1508
BsaWI WCCGGW 1 cut(s) 64
Bsc4I CCNNNNNNNGG 2 cut(s) 860, 1395
Bse118I RCCGGY 1 cut(s) 64
Bse1I ACTGG 2 cut(s) 605, 1216
Bse21I CCTNAGG 1 cut(s) 1110
Bse8I GATNNNNATC 1 cut(s) 1071
BseDI CCNNGG 7 cut(s) 312, 653, 898, 1077, 1179, 1390, 1508
BseGI GGATG 6 cut(s) 251, 303, 801, 894, 1297, 1400
BseJI GATNNNNATC 1 cut(s) 1071
BseLI CCNNNNNNNGG 2 cut(s) 860, 1395
BseMII CTCAG 4 cut(s) 990, 1048, 1124, 1138
BseNI ACTGG 2 cut(s) 605, 1216
BseRI GAGGAG 2 cut(s) 929, 1475
BseSI GKGCMC 1 cut(s) 313
BseXI GCAGC 1 cut(s) 458
BseYI CCCAGC 3 cut(s) 35, 682, 1309
BshFI GGCC 2 cut(s) 889, 1285
BshTI ACCGGT 1 cut(s) 64
BsiHKAI GWGCWC 2 cut(s) 504, 713
BsiHKCI CYCGRG 3 cut(s) 312, 654, 1076
BsiSI CCGG 3 cut(s) 65, 313, 782
BslFI GGGAC 3 cut(s) 332, 715, 1197
BslI CCNNNNNNNGG 2 cut(s) 860, 1395
BsmFI GGGAC 3 cut(s) 332, 715, 1197
BsmI GAATGC 2 cut(s) 52, 1313
BsnI GGCC 2 cut(s) 889, 1285
BsoBI CYCGRG 3 cut(s) 312, 654, 1076
Bsp1286I GDGCHC 3 cut(s) 313, 504, 713
Bsp143I GATC 6 cut(s) 595, 609, 813, 1002, 1015, 1072
BspACI CCGC 2 cut(s) 762, 886
BspANI GGCC 2 cut(s) 889, 1285
BspCNI CTCAG 4 cut(s) 991, 1047, 1123, 1137
BspHI TCATGA 1 cut(s) 1242
BspLI GGNNCC 2 cut(s) 703, 1074
BspMAI CTGCAG 1 cut(s) 476
BspPI GGATC 2 cut(s) 1067, 1080
BspTI CTTAAG 2 cut(s) 80, 1160
BsrFI RCCGGY 1 cut(s) 64
BsrI ACTGG 2 cut(s) 605, 1216
BssAI RCCGGY 1 cut(s) 64
BssECI CCNNGG 7 cut(s) 312, 653, 898, 1077, 1179, 1390, 1508
BssMI GATC 6 cut(s) 595, 609, 813, 1002, 1015, 1072
BssT1I CCWWGG 3 cut(s) 898, 1179, 1508
Bst4CI ACNGT 2 cut(s) 385, 1479
BstAFI CTTAAG 2 cut(s) 80, 1160
BstC8I GCNNGC 2 cut(s) 579, 1224
BstDEI CTNAG 7 cut(s) 727, 999, 1026, 1034, 1110, 1124, 1250
BstF5I GGATG 6 cut(s) 251, 303, 801, 894, 1297, 1400
BstHHI GCGC 1 cut(s) 1429
BstKTI GATC 6 cut(s) 598, 612, 816, 1005, 1018, 1075
BstMBI GATC 6 cut(s) 595, 609, 813, 1002, 1015, 1072
BstMWI GCNNNNNNNGC 1 cut(s) 1310
BstNSI RCATGY 2 cut(s) 581, 1151
BstSCI CCNGG 3 cut(s) 311, 312, 780
BstSFI CTRYAG 2 cut(s) 472, 981
BstSLI GKGCMC 1 cut(s) 313
BstV1I GCAGC 1 cut(s) 458
BstV2I GAAGAC 1 cut(s) 447
BstX2I RGATCY 1 cut(s) 1072
BstYI RGATCY 1 cut(s) 1072
Bsu36I CCTNAGG 1 cut(s) 1110
BsuRI GGCC 2 cut(s) 889, 1285
BtsCI GGATG 6 cut(s) 251, 303, 801, 894, 1297, 1400
BtsI GCAGTG 1 cut(s) 481
BtsIMutI CAGTG 4 cut(s) 481, 612, 723, 1132
Cac8I GCNNGC 2 cut(s) 579, 1224
CaiI CAGNNNCTG 1 cut(s) 1529
CciI TCATGA 1 cut(s) 1242
CfoI GCGC 1 cut(s) 1429
Cfr10I RCCGGY 1 cut(s) 64
Cfr13I GGNCC 1 cut(s) 702
Cfr9I CCCGGG 1 cut(s) 312
CspAI ACCGGT 1 cut(s) 64
CviAII CATG 6 cut(s) 490, 578, 706, 1148, 1243, 1456
DdeI CTNAG 7 cut(s) 727, 999, 1026, 1034, 1110, 1124, 1250
DpnI GATC 6 cut(s) 597, 611, 815, 1004, 1017, 1074
DpnII GATC 6 cut(s) 595, 609, 813, 1002, 1015, 1072
EciI GGCGGA 1 cut(s) 777
Eco130I CCWWGG 3 cut(s) 898, 1179, 1508
Eco147I AGGCCT 1 cut(s) 1285
Eco32I GATATC 2 cut(s) 563, 634
Eco47I GGWCC 1 cut(s) 702
Eco57I CTGAAG 1 cut(s) 699
Eco81I CCTNAGG 1 cut(s) 1110
Eco88I CYCGRG 3 cut(s) 312, 654, 1076
EcoRI GAATTC 1 cut(s) 89
EcoRV GATATC 2 cut(s) 563, 634
EcoT14I CCWWGG 3 cut(s) 898, 1179, 1508
ErhI CCWWGG 3 cut(s) 898, 1179, 1508
FaeI CATG 6 cut(s) 493, 581, 709, 1151, 1246, 1459
FalI AAGNNNNNCTT 4 cut(s) 232, 264, 957, 989
FaqI GGGAC 3 cut(s) 332, 715, 1197
FatI CATG 6 cut(s) 489, 577, 705, 1147, 1242, 1455
FbaI TGATCA 2 cut(s) 609, 813
Fnu4HI GCNGC 2 cut(s) 472, 887
FokI GGATG 6 cut(s) 238, 310, 808, 881, 1304, 1407
Fsp4HI GCNGC 2 cut(s) 472, 887
FspBI CTAG 6 cut(s) 270, 467, 582, 774, 860, 870
FspI TGCGCA 1 cut(s) 1428
GlaI GCGC 1 cut(s) 1428
GluI GCNGC 2 cut(s) 472, 887
GsaI CCCAGC 3 cut(s) 39, 686, 1313
HaeIII GGCC 2 cut(s) 889, 1285
HapII CCGG 3 cut(s) 65, 313, 782
HhaI GCGC 1 cut(s) 1429
Hin1II CATG 6 cut(s) 493, 581, 709, 1151, 1246, 1459
Hin6I GCGC 1 cut(s) 1427
HinP1I GCGC 1 cut(s) 1427
HincII GTYRAC 1 cut(s) 1040
HindII GTYRAC 1 cut(s) 1040
HindIII AAGCTT 2 cut(s) 692, 1028
HinfI GANTC 9 cut(s) 95, 130, 194, 493, 687, 968, 1231, 1334, 1469
HpaII CCGG 3 cut(s) 65, 313, 782
HphI GGTGA 3 cut(s) 594, 823, 934
Hpy166II GTNNAC 2 cut(s) 1040, 1049
Hpy188I TCNGA 5 cut(s) 58, 178, 1394, 1414, 1531
Hpy8I GTNNAC 2 cut(s) 1040, 1049
Hpy99I CGWCG 1 cut(s) 202
HpyAV CCTTC 2 cut(s) 165, 744
HpyCH4III ACNGT 2 cut(s) 385, 1479
HpyCH4IV ACGT 1 cut(s) 403
HpyCH4V TGCA 6 cut(s) 52, 114, 474, 577, 746, 1279
HpyF10VI GCNNNNNNNGC 1 cut(s) 1310
HpyF3I CTNAG 7 cut(s) 727, 999, 1026, 1034, 1110, 1124, 1250
HpySE526I ACGT 1 cut(s) 403
Hsp92II CATG 6 cut(s) 493, 581, 709, 1151, 1246, 1459
HspAI GCGC 1 cut(s) 1427
Ksp22I TGATCA 2 cut(s) 609, 813
Kzo9I GATC 6 cut(s) 595, 609, 813, 1002, 1015, 1072
LmnI GCTCC 5 cut(s) 370, 1183, 1391, 1415, 1512
Lsp1109I GCAGC 1 cut(s) 458
LweI GCATC 4 cut(s) 2, 786, 1095, 1266
MaeI CTAG 6 cut(s) 270, 467, 582, 774, 860, 870
MaeII ACGT 1 cut(s) 403
MaeIII GTNAC 2 cut(s) 60, 379
MalI GATC 6 cut(s) 597, 611, 815, 1004, 1017, 1074
MboI GATC 6 cut(s) 595, 609, 813, 1002, 1015, 1072
MflI RGATCY 1 cut(s) 1072
MhlI GDGCHC 3 cut(s) 313, 504, 713
MluCI AATT 7 cut(s) 89, 336, 735, 1011, 1062, 1165, 1519
MmeI TCCRAC 1 cut(s) 712
MseI TTAA 4 cut(s) 81, 447, 770, 1161
MslI CAYNNNNRTG 2 cut(s) 582, 716
MspCI CTTAAG 2 cut(s) 80, 1160
MspI CCGG 3 cut(s) 65, 313, 782
MspR9I CCNGG 3 cut(s) 313, 314, 782
Mva1269I GAATGC 2 cut(s) 52, 1313
MwoI GCNNNNNNNGC 1 cut(s) 1310
NciI CCSGG 3 cut(s) 313, 314, 782
NdeII GATC 6 cut(s) 595, 609, 813, 1002, 1015, 1072
NlaIII CATG 6 cut(s) 493, 581, 709, 1151, 1246, 1459
NlaIV GGNNCC 2 cut(s) 703, 1074
NsbI TGCGCA 1 cut(s) 1428
NspI RCATGY 2 cut(s) 581, 1151
OliI CACNNNNGTG 1 cut(s) 716
PaeI GCATGC 1 cut(s) 581
PagI TCATGA 1 cut(s) 1242
PceI AGGCCT 1 cut(s) 1285
PctI GAATGC 2 cut(s) 52, 1313
PfeI GAWTC 9 cut(s) 95, 130, 194, 493, 687, 968, 1231, 1334, 1469
PinAI ACCGGT 1 cut(s) 64
PkrI GCNGC 2 cut(s) 473, 888
PsiI TTATAA 1 cut(s) 189
PspFI CCCAGC 3 cut(s) 35, 682, 1309
PspN4I GGNNCC 2 cut(s) 703, 1074
PspPI GGNCC 1 cut(s) 702
PstI CTGCAG 1 cut(s) 476
PstNI CAGNNNCTG 1 cut(s) 1529
PsuI RGATCY 1 cut(s) 1072
RseI CAYNNNNRTG 2 cut(s) 582, 716
SaqAI TTAA 4 cut(s) 81, 447, 770, 1161
SatI GCNGC 2 cut(s) 472, 887
Sau3AI GATC 6 cut(s) 595, 609, 813, 1002, 1015, 1072
Sau96I GGNCC 1 cut(s) 702
ScrFI CCNGG 3 cut(s) 313, 314, 782
SduI GDGCHC 3 cut(s) 313, 504, 713
SfaNI GCATC 4 cut(s) 2, 786, 1095, 1266
SfcI CTRYAG 2 cut(s) 472, 981
SinI GGWCC 1 cut(s) 702
SmaI CCCGGG 1 cut(s) 314
SmiMI CAYNNNNRTG 2 cut(s) 582, 716
SmlI CTYRAG 7 cut(s) 80, 553, 662, 695, 1019, 1052, 1160
SmoI CTYRAG 7 cut(s) 80, 553, 662, 695, 1019, 1052, 1160
SphI GCATGC 1 cut(s) 581
Sse9I AATT 7 cut(s) 89, 336, 735, 1011, 1062, 1165, 1519
SseBI AGGCCT 1 cut(s) 1285
SsiI CCGC 2 cut(s) 762, 886
SspI AATATT 1 cut(s) 934
SspMI CTAG 6 cut(s) 270, 467, 582, 774, 860, 870
StuI AGGCCT 1 cut(s) 1285
StyD4I CCNGG 3 cut(s) 311, 312, 780
StyI CCWWGG 3 cut(s) 898, 1179, 1508
TaaI ACNGT 2 cut(s) 385, 1479
TaiI ACGT 1 cut(s) 406
TaqI TCGA 8 cut(s) 93, 387, 438, 504, 961, 1152, 1236, 1337
TasI AATT 7 cut(s) 89, 336, 735, 1011, 1062, 1165, 1519
TauI GCSGC 1 cut(s) 889
TfiI GAWTC 9 cut(s) 95, 130, 194, 493, 687, 968, 1231, 1334, 1469
Tru1I TTAA 4 cut(s) 81, 447, 770, 1161
Tru9I TTAA 4 cut(s) 81, 447, 770, 1161
TscAI CASTG 4 cut(s) 481, 612, 723, 1132
TseI GCWGC 1 cut(s) 471
TspDTI ATGAA 8 cut(s) 17, 240, 299, 306, 1157, 1259, 1431, 1505
TspMI CCCGGG 1 cut(s) 312
TspRI CASTG 4 cut(s) 481, 612, 723, 1132
Vha464I CTTAAG 2 cut(s) 80, 1160
VpaK11BI GGWCC 1 cut(s) 702
XapI RAATTY 1 cut(s) 89
XceI RCATGY 2 cut(s) 581, 1151
XmaI CCCGGG 1 cut(s) 312
XspI CTAG 6 cut(s) 270, 467, 582, 774, 860, 870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.