Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0006576

Physical Location & Seq

Genomic Coordinates Reverse (-)

20850091 .. 20855894

Gene Structure 5804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g25840.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGCCAACAAGCTCAAAGTAGACCAGCTCCGGGACCAATTGGCCCAGCGCGGCCTCAGCACCGCCGGAACCAAGCCCGTCCTGGTCTCGAGGCTCGAGTCCGCTCTTCTCCAAGACAACAACCAAACGGCAGACGCCGGCGACGGTTCAGTGACTAAAAAAAGGGGACGGAACTCCAATGAAGACGAGGATTCGGCCGCGTCGGAGAAAATCAAGGCGACTGAGAAATTCCGGAGTATGAATATCAAGCAACTCCGCGAAGAGGCAACTCTCCGCGGAGTTGCGGCTACCGGCTCCAAGAAGGAGTTGCTCGAGCGGCTTTGTGAAGATTCCGGGAAGGATTCCGATGACATTGCTGCAACTAAAGCGAAAGAAGAAGGGAATGACAGCAAGGAGAAGATGGTTACTGCTACCAAGAAAGGTTCGGCGGTGTTGGATCAGTGGCTGCCGGATCACATTAAGACACATTATCATGTTTTGCAACTGGGTGATGATGTGTATGATGCCATGTTGAACCAGACCAATGTTGGCCATAACAATAACAAGTTCTTTGTGCTCCAAGTTCTTCAATCCGATGATGGTAGTAGTTTCATGGTTTACTATAGATGGGGGAGAGTAGGTGTCAAGGGTCAAAACAAGTTACTAGGCCCTTACACCCGAGACAAAGCAATCGATGAATTTGAAAAGAAATTCTCTGACAAAACCAGGAATGATTGGTCTGACCGAAAAACATTCCAGTCATTCCCAAAGTGCTATGTGTGGTTAGAAATGGATTATAGCGAAAAGGAAGGTCAATCAGCTGTTGCAGAAAAGAATGGCCCAGCTTTAGTAGCTCAACCTTCGGAAATAAAACTTGATCCCCGTATTGCAAAGTTTGTATCTCTTATCTGCAACGTTGCCATGATGAAGCAGTATATGATGGAAATAGGATACAATGCTGATAAGTTGCCACTGGGGAAGCTGAGCAAATCAACAATTCTAAAGGGTTATAACATCCTGAAGAGTATCGCTGATGTGATTGACCAGTCTGATAGAAGAATGCTTGAACAATTAAGTGGAGAGTTCTACACTGTCATTCCTCATGATTTTGGATTTAAAAAGATGAGTAATTTTGTGATTGATACTCCTCAGAAGTTGAAGCAAAAGTTGGAAATGGTTGAAGCACTCGGTGAAATTGAAGTTGCAACAAAATTGTTGAACGATGATACTGGGACACAGGAAGATCCCTTGTACTCTAATTACCAGAGCCTCCGCTGTGATCTGATACCGCTTGGCGCCGATTCAGATGAATTTGATATGGTTTCAAAGTATTTGCATAATACCCATGCAAAGACGCATTCAAATTATACTGTTGATATCGTTCAGATATTTCGTGCATCGAGAGAGGGTGAAGCTGAACGTTACAGAAAGTTTTTAAGTATGAAAAATAGAATGCTTCTATGGCATGGCTCTCGTCTCACAAATTGGGCTGGCATTTTATCTCAAGGTTTGCGCATAGCTCCACCTGAAGCTCCCGTAACTGGTTACATGTTTGGGAAAGGGATTTACTTCGCCGACATGTTCTCCAAAAGTGCAAACTATTGCTATGCTAAAAATTCTATAAAAGCTGGTGTGCTGCTGCTGTGTGAGGTTGCACTGGGTGACATGGCTGAGCTTTTAACTGCCAAATATGATGCTGACAAGTTACCAGAAGGAAAGCTAAGCACAAAGGGAGTTGGTGGAACTGAACCAGATCTTTCCGAAGCTCAGTTACTAGAGGATGGTGTTATGGTTCCCCTAGGAAAGCCAAAGGAGAATCCACGCAAGGGTGCTTTACTTTACAACGAGTACATAGTTTACAATGTCGACCAGATTCGGATGCGCTATGTTGTTCAAGTGAATTTCAATTTCAAGAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000726 GO:0003674 GO:0003824 GO:0003909 GO:0003910 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006266 GO:0006271 GO:0006273 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016874 GO:0016886 GO:0022616 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051103 GO:0051716 GO:0071704 GO:0090304 GO:0140097 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03410 ko04210 ko04212 ko04214 ko04217 map03410 map04210 map04212 map04214 map04217

Pfam Domains

Protein Families

PARP PARP_reg SAP WGR

Protein Analysis

633

Amino Acids

71.11

Weight (kDa)

7.55

Isoelectric Point (pI)

33.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WGR	PF05406	88 - 166	9.8e-24	WGR domain
PARP_reg	PF02877	205 - 335	7.2e-42	Poly(ADP-ribose) polymerase, regulatory domain
PARP	PF00644	349 - 549	1.6e-79	Poly(ADP-ribose) polymerase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02390 AT4G02390 AT4G02390
fragaria_vesca	FvH4_2g25840 FvH4_2g25840 FvH4_2g25840
malus_domestica	MD03G1289400.v1.1 MD03G1289500.v1.1 MD03G1289600.v1.1
prunus_persica	Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1
pyrus_communis	pycom03g22920
rosa_chinensis	RchiOBHm_Chr6g0294171
rosa_laevigata	RLG00000011893
rosa_multiflora	Rmu_sc0001521.1_g000044
rosa_roxburghii	Rroxscaffold_7G00173580
rosa_rugosa	Rorug06G0242000 Rorug06G0242100
rosa_samantha	Rh6AG354300 Rh6BG361200 Rh6CG368500 Rh6DG355300
rosa_wichuraiana	Rw6G030880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	990
Acc16I	TGCGCA	1 cut(s)	1493
AccB1I	GGYRCC	1 cut(s)	1274
AccBSI	CCGCTC	2 cut(s)	104, 316
AccI	GTMKAC	2 cut(s)	21, 1845
AccII	CGCG	4 cut(s)	51, 200, 258, 276
AccIII	TCCGGA	1 cut(s)	231
AclI	AACGTT	2 cut(s)	894, 1399
AclWI	GGATC	4 cut(s)	444, 459, 851, 1217
AcoI	YGGCCR	3 cut(s)	3, 195, 529
AcsI	RAATTY	6 cut(s)	227, 677, 689, 1289, 1594, 1879
AcuI	CTGAAG	2 cut(s)	1019, 1527
AcyI	GRCGYC	2 cut(s)	135, 1275
AdeI	CACNNNGTG	2 cut(s)	1169, 1640
AfaI	GTAC	2 cut(s)	1232, 1829
AfiI	CCNNNNNNNGG	4 cut(s)	31, 262, 1520, 1805
AflIII	ACRYGT	2 cut(s)	1527, 1557
AjnI	CCWGG	2 cut(s)	81, 704
AjuI	GAANNNNNNNTTGG	2 cut(s)	1130, 1162
Alw21I	GWGCWC	1 cut(s)	558
Alw26I	GTCTC	3 cut(s)	91, 654, 1460
AlwI	GGATC	4 cut(s)	444, 459, 851, 1217
AlwNI	CAGNNNCTG	1 cut(s)	445
Ama87I	CYCGRG	4 cut(s)	88, 95, 311, 657
Aor13HI	TCCGGA	1 cut(s)	231
AoxI	GGCC	7 cut(s)	3, 42, 52, 195, 529, 646, 817
ApeKI	GCWGC	4 cut(s)	356, 445, 1615, 1618
ApoI	RAATTY	6 cut(s)	227, 677, 689, 1289, 1594, 1879
AspA2I	CCTAGG	1 cut(s)	1777
AspLEI	GCGC	4 cut(s)	51, 1277, 1494, 1863
AspS9I	GGNCC	4 cut(s)	34, 43, 647, 818
AsuC2I	CCSGG	2 cut(s)	32, 334
AsuHPI	GGTGA	4 cut(s)	500, 1181, 1400, 1652
AvaI	CYCGRG	4 cut(s)	88, 95, 311, 657
AvaII	GGWCC	1 cut(s)	34
AvrII	CCTAGG	1 cut(s)	1777
BalI	TGGCCA	2 cut(s)	5, 531
BanI	GGYRCC	1 cut(s)	1274
BarI	GAAGNNNNNNTAC	2 cut(s)	1734, 1766
BbsI	GAAGAC	1 cut(s)	189
Bbv12I	GWGCWC	1 cut(s)	558
BbvCI	CCTCAGC	1 cut(s)	56
BbvI	GCAGC	4 cut(s)	343, 432, 1602, 1605
BccI	CCATC	5 cut(s)	394, 572, 600, 913, 1754
BceAI	ACGGC	1 cut(s)	144
BcgI	CGANNNNNNTGC	4 cut(s)	335, 369, 1433, 1467
BciT130I	CCWGG	2 cut(s)	83, 706
BciVI	GTATCC	1 cut(s)	923
BcnI	CCSGG	2 cut(s)	32, 334
BcoDI	GTCTC	3 cut(s)	91, 654, 1460
BfaI	CTAG	3 cut(s)	644, 1754, 1778
BfmI	CTRYAG	1 cut(s)	601
BfoI	RGCGCY	1 cut(s)	1278
BfuI	GTATCC	1 cut(s)	923
BglII	AGATCT	1 cut(s)	1732
BisI	GCNGC	8 cut(s)	52, 198, 285, 317, 357, 446, 1616, 1619
BlnI	CCTAGG	1 cut(s)	1777
BlpI	GCTNAGC	3 cut(s)	962, 1650, 1700
BlsI	GCNGC	8 cut(s)	53, 199, 286, 318, 358, 447, 1617, 1620
Bme1390I	CCNGG	4 cut(s)	32, 83, 334, 706
Bme18I	GGWCC	1 cut(s)	34
BmeT110I	CYCGRG	4 cut(s)	88, 95, 311, 657
BmgT120I	GGNCC	4 cut(s)	34, 43, 647, 818
BmiI	GGNNCC	5 cut(s)	35, 70, 295, 1276, 1773
BmrFI	CCNGG	4 cut(s)	32, 83, 334, 706
BmrI	ACTGGG	4 cut(s)	494, 962, 1218, 1646
BmsI	GCATC	4 cut(s)	493, 1385, 1663, 1848
BmuI	ACTGGG	4 cut(s)	494, 962, 1218, 1646
BpiI	GAAGAC	1 cut(s)	189
Bpu10I	CCTNAGC	1 cut(s)	56
Bpu1102I	GCTNAGC	3 cut(s)	962, 1650, 1700
BpuEI	CTTGAG	1 cut(s)	1467
BpuMI	CCSGG	2 cut(s)	32, 334
Bsa29I	ATCGAT	1 cut(s)	672
BsaHI	GRCGYC	2 cut(s)	135, 1275
BsaI	GGTCTC	1 cut(s)	91
BsaJI	CCNNGG	2 cut(s)	274, 1777
BsaWI	WCCGGW	1 cut(s)	231
BsaXI	ACNNNNNCTCC	4 cut(s)	604, 634, 1547, 1577
Bsc4I	CCNNNNNNNGG	4 cut(s)	31, 262, 1520, 1805
Bse118I	RCCGGY	2 cut(s)	137, 290
Bse1I	ACTGG	7 cut(s)	489, 736, 957, 1024, 1213, 1525, 1641
Bse3DI	GCAATG	1 cut(s)	351
BseAI	TCCGGA	1 cut(s)	231
BseBI	CCWGG	2 cut(s)	83, 706
BseCI	ATCGAT	1 cut(s)	672
BseDI	CCNNGG	2 cut(s)	274, 1777
BseGI	GGATG	3 cut(s)	993, 1765, 1863
BseLI	CCNNNNNNNGG	4 cut(s)	31, 262, 1520, 1805
BseMI	GCAATG	1 cut(s)	351
BseMII	CTCAG	6 cut(s)	70, 213, 953, 1142, 1641, 1760
BseNI	ACTGG	7 cut(s)	489, 736, 957, 1024, 1213, 1525, 1641
BseRI	GAGGAG	1 cut(s)	1116
BseX3I	CGGCCG	1 cut(s)	195
BseXI	GCAGC	4 cut(s)	343, 432, 1602, 1605
BseYI	CCCAGC	2 cut(s)	45, 820
Bsh1236I	CGCG	4 cut(s)	51, 200, 258, 276
Bsh1285I	CGRYCG	1 cut(s)	198
BshFI	GGCC	7 cut(s)	5, 44, 54, 197, 531, 648, 819
BshNI	GGYRCC	1 cut(s)	1274
BshVI	ATCGAT	1 cut(s)	672
BsiEI	CGRYCG	1 cut(s)	198
BsiHKAI	GWGCWC	1 cut(s)	558
BsiHKCI	CYCGRG	4 cut(s)	88, 95, 311, 657
BsiSI	CCGG	7 cut(s)	31, 66, 138, 232, 291, 333, 449
BslFI	GGGAC	3 cut(s)	47, 180, 1225
BslI	CCNNNNNNNGG	4 cut(s)	31, 262, 1520, 1805
BsmAI	GTCTC	3 cut(s)	91, 654, 1460
BsmBI	CGTCTC	1 cut(s)	1460
BsmFI	GGGAC	3 cut(s)	47, 180, 1225
BsmI	GAATGC	3 cut(s)	1044, 1336, 1437
BsnI	GGCC	7 cut(s)	5, 44, 54, 197, 531, 648, 819
Bso31I	GGTCTC	1 cut(s)	91
BsoBI	CYCGRG	4 cut(s)	88, 95, 311, 657
Bsp1286I	GDGCHC	1 cut(s)	558
Bsp13I	TCCGGA	1 cut(s)	231
Bsp143I	GATC	6 cut(s)	436, 451, 856, 1222, 1258, 1732
Bsp1720I	GCTNAGC	3 cut(s)	962, 1650, 1700
BspANI	GGCC	7 cut(s)	5, 44, 54, 197, 531, 648, 819
BspCNI	CTCAG	6 cut(s)	69, 214, 954, 1141, 1642, 1759
BspDI	ATCGAT	1 cut(s)	672
BspEI	TCCGGA	1 cut(s)	231
BspFNI	CGCG	4 cut(s)	51, 200, 258, 276
BspHI	TCATGA	1 cut(s)	1081
BspLI	GGNNCC	5 cut(s)	35, 70, 295, 1276, 1773
BspPI	GGATC	4 cut(s)	444, 459, 851, 1217
BspQI	GCTCTTC	1 cut(s)	111
BspT107I	GGYRCC	1 cut(s)	1274
BspTNI	GGTCTC	1 cut(s)	91
BsrBI	CCGCTC	2 cut(s)	104, 316
BsrDI	GCAATG	1 cut(s)	351
BsrFI	RCCGGY	2 cut(s)	137, 290
BsrI	ACTGG	7 cut(s)	489, 736, 957, 1024, 1213, 1525, 1641
BssAI	RCCGGY	2 cut(s)	137, 290
BssECI	CCNNGG	2 cut(s)	274, 1777
BssMI	GATC	6 cut(s)	436, 451, 856, 1222, 1258, 1732
BssNI	GRCGYC	2 cut(s)	135, 1275
BssT1I	CCWWGG	1 cut(s)	1777
Bst2UI	CCWGG	2 cut(s)	83, 706
Bst4CI	ACNGT	3 cut(s)	146, 1072, 1351
Bst6I	CTCTTC	3 cut(s)	111, 255, 995
BstACI	GRCGYC	2 cut(s)	135, 1275
BstC8I	GCNNGC	2 cut(s)	139, 1471
BstDEI	CTNAG	7 cut(s)	56, 222, 962, 1128, 1650, 1700, 1746
BstDSI	CCRYGG	1 cut(s)	274
BstF5I	GGATG	3 cut(s)	993, 1765, 1863
BstFNI	CGCG	4 cut(s)	51, 200, 258, 276
BstH2I	RGCGCY	1 cut(s)	1278
BstHHI	GCGC	4 cut(s)	51, 1277, 1494, 1863
BstKTI	GATC	6 cut(s)	439, 454, 859, 1225, 1261, 1735
BstMAI	GTCTC	3 cut(s)	91, 654, 1460
BstMBI	GATC	6 cut(s)	436, 451, 856, 1222, 1258, 1732
BstMCI	CGRYCG	1 cut(s)	198
BstMWI	GCNNNNNNNGC	5 cut(s)	57, 316, 365, 830, 1441
BstNI	CCWGG	2 cut(s)	83, 706
BstNSI	RCATGY	2 cut(s)	1531, 1561
BstSCI	CCNGG	4 cut(s)	30, 81, 332, 704
BstSFI	CTRYAG	1 cut(s)	601
BstUI	CGCG	4 cut(s)	51, 200, 258, 276
BstV1I	GCAGC	4 cut(s)	343, 432, 1602, 1605
BstV2I	GAAGAC	1 cut(s)	189
BstX2I	RGATCY	2 cut(s)	1222, 1732
BstYI	RGATCY	2 cut(s)	1222, 1732
BstZI	CGGCCG	1 cut(s)	195
Bsu15I	ATCGAT	1 cut(s)	672
BsuI	GTATCC	1 cut(s)	923
BsuRI	GGCC	7 cut(s)	5, 44, 54, 197, 531, 648, 819
BsuTUI	ATCGAT	1 cut(s)	672
BtgI	CCRYGG	1 cut(s)	274
BtsCI	GGATG	3 cut(s)	993, 1765, 1863
BtsIMutI	CAGTG	5 cut(s)	156, 446, 950, 1068, 1634
Cac8I	GCNNGC	2 cut(s)	139, 1471
CaiI	CAGNNNCTG	1 cut(s)	445
CciI	TCATGA	1 cut(s)	1081
CfoI	GCGC	4 cut(s)	51, 1277, 1494, 1863
Cfr10I	RCCGGY	2 cut(s)	137, 290
Cfr13I	GGNCC	4 cut(s)	34, 43, 647, 818
Cfr42I	CCGCGG	1 cut(s)	277
ClaI	ATCGAT	1 cut(s)	672
CseI	GACGC	3 cut(s)	143, 189, 1342
Csp6I	GTAC	2 cut(s)	1231, 1828
CviQI	GTAC	2 cut(s)	1231, 1828
DdeI	CTNAG	7 cut(s)	56, 222, 962, 1128, 1650, 1700, 1746
DinI	GGCGCC	1 cut(s)	1276
DpnI	GATC	6 cut(s)	438, 453, 858, 1224, 1260, 1734
DpnII	GATC	6 cut(s)	436, 451, 856, 1222, 1258, 1732
DraI	TTTAAA	1 cut(s)	1096
DraIII	CACNNNGTG	2 cut(s)	1169, 1640
EaeI	YGGCCR	3 cut(s)	3, 195, 529
EagI	CGGCCG	1 cut(s)	195
Eam1104I	CTCTTC	3 cut(s)	111, 255, 995
EarI	CTCTTC	3 cut(s)	111, 255, 995
EclXI	CGGCCG	1 cut(s)	195
Eco130I	CCWWGG	1 cut(s)	1777
Eco31I	GGTCTC	1 cut(s)	91
Eco32I	GATATC	1 cut(s)	1357
Eco47I	GGWCC	1 cut(s)	34
Eco52I	CGGCCG	1 cut(s)	195
Eco57I	CTGAAG	2 cut(s)	1019, 1527
Eco88I	CYCGRG	4 cut(s)	88, 95, 311, 657
EcoO109I	RGGNCCY	1 cut(s)	647
EcoRII	CCWGG	2 cut(s)	81, 704
EcoRV	GATATC	1 cut(s)	1357
EcoT14I	CCWWGG	1 cut(s)	1777
EgeI	GGCGCC	1 cut(s)	1276
EheI	GGCGCC	1 cut(s)	1276
ErhI	CCWWGG	1 cut(s)	1777
Esp3I	CGTCTC	1 cut(s)	1460
FaqI	GGGAC	3 cut(s)	47, 180, 1225
FblI	GTMKAC	2 cut(s)	21, 1845
Fnu4HI	GCNGC	8 cut(s)	52, 198, 285, 317, 357, 446, 1616, 1619
FokI	GGATG	3 cut(s)	980, 1772, 1870
Fsp4HI	GCNGC	8 cut(s)	52, 198, 285, 317, 357, 446, 1616, 1619
FspBI	CTAG	3 cut(s)	644, 1754, 1778
FspI	TGCGCA	1 cut(s)	1493
GlaI	GCGC	4 cut(s)	50, 1276, 1493, 1862
GluI	GCNGC	8 cut(s)	52, 198, 285, 317, 357, 446, 1616, 1619
GsaI	CCCAGC	2 cut(s)	49, 824
HaeII	RGCGCY	1 cut(s)	1278
HaeIII	GGCC	7 cut(s)	5, 44, 54, 197, 531, 648, 819
HapII	CCGG	7 cut(s)	31, 66, 138, 232, 291, 333, 449
HgaI	GACGC	3 cut(s)	143, 189, 1342
HhaI	GCGC	4 cut(s)	51, 1277, 1494, 1863
Hin1I	GRCGYC	2 cut(s)	135, 1275
Hin6I	GCGC	4 cut(s)	49, 1275, 1492, 1861
HinP1I	GCGC	4 cut(s)	49, 1275, 1492, 1861
HincII	GTYRAC	1 cut(s)	1846
HindII	GTYRAC	1 cut(s)	1846
HinfI	GANTC	7 cut(s)	98, 191, 329, 341, 1280, 1795, 1852
HpaII	CCGG	7 cut(s)	31, 66, 138, 232, 291, 333, 449
HphI	GGTGA	4 cut(s)	500, 1181, 1400, 1652
Hpy166II	GTNNAC	4 cut(s)	22, 598, 1837, 1846
Hpy188III	TCNNGA	6 cut(s)	88, 232, 997, 1082, 1380, 1891
Hpy8I	GTNNAC	4 cut(s)	22, 598, 1837, 1846
Hpy99I	CGWCG	2 cut(s)	146, 205
HpyAV	CCTTC	6 cut(s)	295, 331, 371, 782, 849, 1685
HpyCH4III	ACNGT	3 cut(s)	146, 1072, 1351
HpyCH4IV	ACGT	2 cut(s)	894, 1399
HpyF10VI	GCNNNNNNNGC	5 cut(s)	57, 316, 365, 830, 1441
HpyF3I	CTNAG	7 cut(s)	56, 222, 962, 1128, 1650, 1700, 1746
HpySE526I	ACGT	2 cut(s)	894, 1399
Hsp92I	GRCGYC	2 cut(s)	135, 1275
HspAI	GCGC	4 cut(s)	49, 1275, 1492, 1861
KasI	GGCGCC	1 cut(s)	1274
Kpn2I	TCCGGA	1 cut(s)	231
KroI	GCCGGC	1 cut(s)	137
KroNI	GCCGGC	1 cut(s)	139
KspI	CCGCGG	1 cut(s)	277
Kzo9I	GATC	6 cut(s)	436, 451, 856, 1222, 1258, 1732
LguI	GCTCTTC	1 cut(s)	111
LmnI	GCTCC	5 cut(s)	33, 299, 561, 1504, 1516
Lsp1109I	GCAGC	4 cut(s)	343, 432, 1602, 1605
LweI	GCATC	4 cut(s)	493, 1385, 1663, 1848
MaeI	CTAG	3 cut(s)	644, 1754, 1778
MaeII	ACGT	2 cut(s)	894, 1399
MaeIII	GTNAC	9 cut(s)	151, 403, 639, 1400, 1516, 1523, 1640, 1683, 1749
MalI	GATC	6 cut(s)	438, 453, 858, 1224, 1260, 1734
MbiI	CCGCTC	2 cut(s)	104, 316
MboI	GATC	6 cut(s)	436, 451, 856, 1222, 1258, 1732
MfeI	CAATTG	1 cut(s)	38
MflI	RGATCY	2 cut(s)	1222, 1732
MhlI	GDGCHC	1 cut(s)	558
MlsI	TGGCCA	2 cut(s)	5, 531
MluNI	TGGCCA	2 cut(s)	5, 531
Mly113I	GGCGCC	1 cut(s)	1275
MlyI	GAGTC	1 cut(s)	107
MmeI	TCCRAC	3 cut(s)	183, 414, 1128
Mox20I	TGGCCA	2 cut(s)	5, 531
MreI	CGCCGGCG	1 cut(s)	137
MroI	TCCGGA	1 cut(s)	231
MroNI	GCCGGC	1 cut(s)	137
MscI	TGGCCA	2 cut(s)	5, 531
MseI	TTAA	5 cut(s)	459, 1052, 1095, 1415, 1658
MslI	CAYNNNNRTG	1 cut(s)	471
Msp20I	TGGCCA	2 cut(s)	5, 531
MspA1I	CMGCKG	3 cut(s)	276, 800, 1254
MspI	CCGG	7 cut(s)	31, 66, 138, 232, 291, 333, 449
MspR9I	CCNGG	4 cut(s)	32, 83, 334, 706
MunI	CAATTG	1 cut(s)	38
Mva1269I	GAATGC	3 cut(s)	1044, 1336, 1437
MvaI	CCWGG	2 cut(s)	83, 706
MvnI	CGCG	4 cut(s)	51, 200, 258, 276
MwoI	GCNNNNNNNGC	5 cut(s)	57, 316, 365, 830, 1441
NaeI	GCCGGC	1 cut(s)	139
NarI	GGCGCC	1 cut(s)	1275
NciI	CCSGG	2 cut(s)	32, 334
NdeII	GATC	6 cut(s)	436, 451, 856, 1222, 1258, 1732
NgoMIV	GCCGGC	1 cut(s)	137
NlaIV	GGNNCC	5 cut(s)	35, 70, 295, 1276, 1773
NmuCI	GTSAC	2 cut(s)	151, 1640
NsbI	TGCGCA	1 cut(s)	1493
NspI	RCATGY	2 cut(s)	1531, 1561
PaeR7I	CTCGAG	3 cut(s)	88, 95, 311
PagI	TCATGA	1 cut(s)	1081
PciI	ACATGT	2 cut(s)	1527, 1557
PciSI	GCTCTTC	1 cut(s)	111
PctI	GAATGC	3 cut(s)	1044, 1336, 1437
PdiI	GCCGGC	1 cut(s)	139
PfeI	GAWTC	6 cut(s)	191, 329, 341, 1280, 1795, 1852
PfoI	TCCNGGA	2 cut(s)	30, 332
PkrI	GCNGC	8 cut(s)	53, 199, 286, 318, 358, 447, 1617, 1620
PleI	GAGTC	1 cut(s)	106
PluTI	GGCGCC	1 cut(s)	1278
PpsI	GAGTC	1 cut(s)	106
PscI	ACATGT	2 cut(s)	1527, 1557
PsiI	TTATAA	1 cut(s)	990
Psp1406I	AACGTT	2 cut(s)	894, 1399
Psp6I	CCWGG	2 cut(s)	81, 704
PspFI	CCCAGC	2 cut(s)	45, 820
PspGI	CCWGG	2 cut(s)	81, 704
PspN4I	GGNNCC	5 cut(s)	35, 70, 295, 1276, 1773
PspPI	GGNCC	4 cut(s)	34, 43, 647, 818
PspXI	VCTCGAGB	2 cut(s)	95, 311
PstNI	CAGNNNCTG	1 cut(s)	445
PsuI	RGATCY	2 cut(s)	1222, 1732
PvuII	CAGCTG	1 cut(s)	800
RsaI	GTAC	2 cut(s)	1232, 1829
RsaNI	GTAC	2 cut(s)	1231, 1828
RseI	CAYNNNNRTG	1 cut(s)	471
SacII	CCGCGG	1 cut(s)	277
SalI	GTCGAC	1 cut(s)	1844
SapI	GCTCTTC	1 cut(s)	111
SaqAI	TTAA	5 cut(s)	459, 1052, 1095, 1415, 1658
SatI	GCNGC	8 cut(s)	52, 198, 285, 317, 357, 446, 1616, 1619
Sau3AI	GATC	6 cut(s)	436, 451, 856, 1222, 1258, 1732
Sau96I	GGNCC	4 cut(s)	34, 43, 647, 818
SchI	GAGTC	1 cut(s)	107
ScrFI	CCNGG	4 cut(s)	32, 83, 334, 706
SduI	GDGCHC	1 cut(s)	558
SfaNI	GCATC	4 cut(s)	493, 1385, 1663, 1848
SfcI	CTRYAG	1 cut(s)	601
SfoI	GGCGCC	1 cut(s)	1276
Sfr274I	CTCGAG	3 cut(s)	88, 95, 311
Sfr303I	CCGCGG	1 cut(s)	277
SgrAI	CRCCGGYG	1 cut(s)	137
SgrBI	CCGCGG	1 cut(s)	277
SinI	GGWCC	1 cut(s)	34
SlaI	CTCGAG	3 cut(s)	88, 95, 311
SmiMI	CAYNNNNRTG	1 cut(s)	471
SmlI	CTYRAG	4 cut(s)	88, 95, 311, 1482
SmoI	CTYRAG	4 cut(s)	88, 95, 311, 1482
SspDI	GGCGCC	1 cut(s)	1274
SspMI	CTAG	3 cut(s)	644, 1754, 1778
StyD4I	CCNGG	4 cut(s)	30, 81, 332, 704
StyI	CCWWGG	1 cut(s)	1777
TaaI	ACNGT	3 cut(s)	146, 1072, 1351
TaiI	ACGT	2 cut(s)	897, 1402
TaqI	TCGA	6 cut(s)	89, 96, 312, 672, 1379, 1845
TaqII	GACCGA	1 cut(s)	738
TatI	WGTACW	2 cut(s)	1230, 1827
TauI	GCSGC	4 cut(s)	54, 200, 287, 319
TfiI	GAWTC	6 cut(s)	191, 329, 341, 1280, 1795, 1852
Tru1I	TTAA	5 cut(s)	459, 1052, 1095, 1415, 1658
Tru9I	TTAA	5 cut(s)	459, 1052, 1095, 1415, 1658
TscAI	CASTG	5 cut(s)	156, 446, 957, 1075, 1641
TseFI	GTSAC	2 cut(s)	151, 1640
TseI	GCWGC	4 cut(s)	356, 445, 1615, 1618
Tsp45I	GTSAC	2 cut(s)	151, 1640
TspDTI	ATGAA	7 cut(s)	195, 254, 580, 690, 920, 1302, 1436
TspGWI	ACGGA	1 cut(s)	184
TspRI	CASTG	5 cut(s)	156, 446, 957, 1075, 1641
VpaK11BI	GGWCC	1 cut(s)	34
XapI	RAATTY	6 cut(s)	227, 677, 689, 1289, 1594, 1879
XceI	RCATGY	2 cut(s)	1531, 1561
XcmI	CCANNNNNNNNNTGG	2 cut(s)	79, 524
XhoI	CTCGAG	3 cut(s)	88, 95, 311
XmaJI	CCTAGG	1 cut(s)	1777
XmiI	GTMKAC	2 cut(s)	21, 1845
XspI	CTAG	3 cut(s)	644, 1754, 1778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.