Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0006576

Physical Location & Seq

Genomic Coordinates Reverse (-)

55457069 .. 55462257

Gene Structure 5189 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG354300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGGCGAACAAGCTCAAAGTAGAACAACTCCGAGACCAATTGGCCCAGCGTGGTCTCAGCACAGCCGGAACCAAGCCCGTCCTGGTTTCGAGGCTCGAGTCCGCTCTTCACAACCAAACCGCAGCCTCAACCGACGTCTCAGCCACTAAAAAGAGAGGAAGGAACTCCAATGAGGATGAGGATTCAACGGCGTCCAAGAAAATCAAGGCAACTGAGAAGCTCCAGAATATGAATATCAAGCAACTCCGCGAGGAAGCAACTCTTCGCGGAATTCCGGCTACTGGATCCAAGAAGGAGTTGCTGGAGAGGCTCTGTCAAGATTCCGATAAGGATTGCATTGACATTGATGCGAGTAGAGTAGTGAAGGAAGAAGGGAATGACAGCAAGGAGAAGATGGTTACTGCTACCAAAAAAGGTGCGGCTGTGTTGGATCAGTGGCTACCGGATAATATAAAGACACATTATCATGTTTTGCAACTGGGTGATGATGTGTATGATGCCATGTTGAACCAGACCAATGTTGGCCACAACAATAACAAGTTCTATCTACTTCAAGTTCTTGAATCTGATGATGGTGGTAGTTTCATGGTTTACTATAGATGGGGGAGAGTAGGTGTCAAGGGTCAAAACAAGTTACTAGGCCCTTACACATCCCGAGACAGGGCAATCGAGGAATTTGAAAAGAAATTCTCTGAAAAAACCAGGAATGATTGGTCTGAACGAAAAACATTCCAGTCATTCCCAAAGTGCTATGTGTGGTTAGAAATGGATTACAGCGGAAAGGAAGGCCAATCAGCTGTTGCAGAAAAGAATGGCTCAGCTTTAGTACCTCAACCTTTGGAAACAAAACTTGATCCCCGTATCGCAAAGTTCGTATCTCTTATCTGCAACATTGCCATGATGAAGCAGTATATGATGGAAATAGGATACAACGCTGATAAATTGCCACTGGGGAAGCTGAGCAAATCAACAATTCTAAAGGGTTATAATATACTGAAGAGTATTGCTGATGTGATTGGCCAGTCTAATAAGAGAACGCTTGAACAATTAAGTGGAGAGTTCTACACTGTCATTCCTCATGATTTTGGATTTAAAAAGATGAGCAACTTTGTGATTGATACTCCTCAGAAGTTGAAGCAAAAGTTGGAAATGGTTGAAGCACTAGGTGAAATTGAAGTTGCAACAAAATTGTTGAATGATGATAATGGGACACAGGAGGATCCCTTGTATTCTAATTACCAGAGCCTCCGCTGTGAGCTGACACCACTTGGTGCCGATTCAGATGAATTTGATATGGTTTCAAAGTATTTGCATAACACCCATGCAAAAACGCATTCAAATTATACCGTTGATATCGTTCAGATATTCCGTGCATCAAGAGAGGGTGAAGCTGAAAGTTATAGAAAGTTTTTTAGTATGAAAAATAGAATGCTTCTATGGCATGGTTCTCGTCTCACAAATTGGGCTGGCATTTTATCTCAAGGTTTGCGCATAGCTCCACCTGAAGCTCCCGTAACTGGTTACATGTTTGGGAAAGGGATTTACTTTGCCGACATGTTCTCCAAAAGTGCAAATTATTGCTATGCTAACAATTCTTCTACAGCTGGTGTGCTGCTGCTGTGTGAGGTTGCACTGGGTGACATGGCTGAGCTTTTAACTGCCAAATATGATGCTGACAACTTACCAGAAGGGAAGCTAAGCACAAAGGGAGTTGGTGGAACTGAACCAGATCTTTCCGAAGCTCAGTCACTAGAGGATGGTGTTATGGTTCCCTTAGGAAAGCCAAAAGAAAATCCGCGCAAGGGTGCTTTACTGTACAATGAGTACATAGTTTACAATGTCGACCAGATTCGGATGCGCTATGTTGTTCAAGTGAATTTCAATTTCAAGAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000726 GO:0003674 GO:0003824 GO:0003909 GO:0003910 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006266 GO:0006271 GO:0006273 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016070 GO:0016874 GO:0016886 GO:0022616 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051103 GO:0051716 GO:0071704 GO:0090304 GO:0140097 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03410 ko04210 ko04212 ko04214 ko04217 map03410 map04210 map04212 map04214 map04217

Pfam Domains

Protein Families

PARP PARP_reg SAP WGR

Protein Analysis

631

Amino Acids

70.96

Weight (kDa)

7.92

Isoelectric Point (pI)

36.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAP	PF02037	2 - 36	1.5e-11	SAP domain
SAP	PF02037	74 - 106	2.3e-07	SAP domain
WGR	PF05406	165 - 244	1.4e-25	WGR domain
PARP_reg	PF02877	283 - 413	1.2e-41	Poly(ADP-ribose) polymerase, regulatory domain
PARP	PF00644	427 - 627	2.7e-79	Poly(ADP-ribose) polymerase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02390 AT4G02390 AT4G02390
fragaria_vesca	FvH4_2g25840 FvH4_2g25840 FvH4_2g25840
malus_domestica	MD03G1289400.v1.1 MD03G1289500.v1.1 MD03G1289600.v1.1
prunus_persica	Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1 Prupe.8G262600_v2.0.a1
pyrus_communis	pycom03g22920
rosa_chinensis	RchiOBHm_Chr6g0294171
rosa_laevigata	RLG00000011893
rosa_multiflora	Rmu_sc0001521.1_g000044
rosa_roxburghii	Rroxscaffold_7G00173580
rosa_rugosa	Rorug06G0242000 Rorug06G0242100
rosa_samantha	Rh6AG354300 Rh6BG361200 Rh6CG368500 Rh6DG355300
rosa_wichuraiana	Rw6G030880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	987
AatII	GACGTC	1 cut(s)	138
Acc16I	TGCGCA	1 cut(s)	1490
AccB1I	GGYRCC	1 cut(s)	1271
AccBSI	CCGCTC	1 cut(s)	104
AccI	GTMKAC	1 cut(s)	1842
AccII	CGCG	3 cut(s)	249, 267, 1798
AciI	CCGC	8 cut(s)	102, 120, 247, 267, 419, 777, 1249, 1796
AclWI	GGATC	6 cut(s)	279, 292, 438, 848, 1214, 1227
AcoI	YGGCCR	2 cut(s)	523, 1018
AcsI	RAATTY	5 cut(s)	270, 674, 686, 1286, 1876
AcuI	CTGAAG	2 cut(s)	1016, 1524
AcyI	GRCGYC	2 cut(s)	135, 191
AdeI	CACNNNGTG	3 cut(s)	1166, 1271, 1637
AfaI	GTAC	3 cut(s)	828, 1817, 1826
AfiI	CCNNNNNNNGG	5 cut(s)	281, 660, 661, 1517, 1802
AflIII	ACRYGT	2 cut(s)	1524, 1554
AjnI	CCWGG	2 cut(s)	81, 701
AjuI	GAANNNNNNNTTGG	2 cut(s)	1127, 1159
Alw26I	GTCTC	5 cut(s)	27, 59, 142, 651, 1457
AlwI	GGATC	6 cut(s)	279, 292, 438, 848, 1214, 1227
Ama87I	CYCGRG	2 cut(s)	95, 654
AoxI	GGCC	5 cut(s)	42, 523, 640, 787, 1018
ApeKI	GCWGC	3 cut(s)	122, 1612, 1615
ApoI	RAATTY	5 cut(s)	270, 674, 686, 1286, 1876
AspLEI	GCGC	3 cut(s)	1491, 1800, 1860
AspS9I	GGNCC	2 cut(s)	43, 641
AsuHPI	GGTGA	4 cut(s)	494, 1178, 1397, 1649
AvaI	CYCGRG	2 cut(s)	95, 654
AxyI	CCTNAGG	1 cut(s)	1774
BalI	TGGCCA	2 cut(s)	525, 1020
BamHI	GGATCC	2 cut(s)	284, 1219
BanI	GGYRCC	1 cut(s)	1271
BbvI	GCAGC	3 cut(s)	134, 1599, 1602
BccI	CCATC	5 cut(s)	388, 566, 594, 910, 1751
BceAI	ACGGC	1 cut(s)	204
BcgI	CGANNNNNNTGC	2 cut(s)	1430, 1464
BciT130I	CCWGG	2 cut(s)	83, 703
BciVI	GTATCC	1 cut(s)	920
BcoDI	GTCTC	5 cut(s)	27, 59, 142, 651, 1457
BfaI	CTAG	3 cut(s)	638, 1163, 1751
BfmI	CTRYAG	2 cut(s)	595, 1599
BfuI	GTATCC	1 cut(s)	920
BglII	AGATCT	1 cut(s)	1729
BisI	GCNGC	4 cut(s)	123, 420, 1613, 1616
BlpI	GCTNAGC	4 cut(s)	817, 959, 1647, 1697
BlsI	GCNGC	4 cut(s)	124, 421, 1614, 1617
Bme1390I	CCNGG	2 cut(s)	83, 703
BmeT110I	CYCGRG	2 cut(s)	95, 654
BmgT120I	GGNCC	2 cut(s)	43, 641
BmiI	GGNNCC	5 cut(s)	70, 286, 1221, 1273, 1770
BmrFI	CCNGG	2 cut(s)	83, 703
BmrI	ACTGGG	3 cut(s)	488, 959, 1643
BmsI	GCATC	5 cut(s)	337, 487, 1382, 1660, 1845
BmuI	ACTGGG	3 cut(s)	488, 959, 1643
BpmI	CTGGAG	2 cut(s)	206, 323
Bpu1102I	GCTNAGC	4 cut(s)	817, 959, 1647, 1697
BpuEI	CTTGAG	1 cut(s)	1464
BsaHI	GRCGYC	2 cut(s)	135, 191
BsaI	GGTCTC	2 cut(s)	27, 59
BsaWI	WCCGGW	1 cut(s)	442
BsaXI	ACNNNNNCTCC	4 cut(s)	598, 628, 1544, 1574
Bsc4I	CCNNNNNNNGG	5 cut(s)	281, 660, 661, 1517, 1802
Bse1I	ACTGG	7 cut(s)	286, 483, 733, 954, 1021, 1522, 1638
Bse21I	CCTNAGG	1 cut(s)	1774
Bse3DI	GCAATG	1 cut(s)	891
BseBI	CCWGG	2 cut(s)	83, 703
BseGI	GGATG	4 cut(s)	181, 650, 1762, 1860
BseLI	CCNNNNNNNGG	5 cut(s)	281, 660, 661, 1517, 1802
BseMI	GCAATG	1 cut(s)	891
BseMII	CTCAG	8 cut(s)	70, 153, 204, 831, 950, 1139, 1638, 1757
BseNI	ACTGG	7 cut(s)	286, 483, 733, 954, 1021, 1522, 1638
BseRI	GAGGAG	1 cut(s)	1113
BseXI	GCAGC	3 cut(s)	134, 1599, 1602
BseYI	CCCAGC	1 cut(s)	45
Bsh1236I	CGCG	3 cut(s)	249, 267, 1798
BshFI	GGCC	5 cut(s)	44, 525, 642, 789, 1020
BshNI	GGYRCC	1 cut(s)	1271
BsiHKCI	CYCGRG	2 cut(s)	95, 654
BsiSI	CCGG	3 cut(s)	66, 275, 443
BslFI	GGGAC	1 cut(s)	1222
BslI	CCNNNNNNNGG	5 cut(s)	281, 660, 661, 1517, 1802
BsmAI	GTCTC	5 cut(s)	27, 59, 142, 651, 1457
BsmBI	CGTCTC	2 cut(s)	142, 1457
BsmFI	GGGAC	1 cut(s)	1222
BsmI	GAATGC	2 cut(s)	1333, 1434
BsnI	GGCC	5 cut(s)	44, 525, 642, 789, 1020
Bso31I	GGTCTC	2 cut(s)	27, 59
BsoBI	CYCGRG	2 cut(s)	95, 654
Bsp1407I	TGTACA	1 cut(s)	1815
Bsp143I	GATC	5 cut(s)	284, 430, 853, 1219, 1729
Bsp1720I	GCTNAGC	4 cut(s)	817, 959, 1647, 1697
BspACI	CCGC	8 cut(s)	102, 120, 247, 267, 419, 777, 1249, 1796
BspANI	GGCC	5 cut(s)	44, 525, 642, 789, 1020
BspCNI	CTCAG	8 cut(s)	69, 152, 205, 830, 951, 1138, 1639, 1756
BspFNI	CGCG	3 cut(s)	249, 267, 1798
BspHI	TCATGA	1 cut(s)	1078
BspLI	GGNNCC	5 cut(s)	70, 286, 1221, 1273, 1770
BspPI	GGATC	6 cut(s)	279, 292, 438, 848, 1214, 1227
BspQI	GCTCTTC	1 cut(s)	111
BspT107I	GGYRCC	1 cut(s)	1271
BspTNI	GGTCTC	2 cut(s)	27, 59
BsrBI	CCGCTC	1 cut(s)	104
BsrDI	GCAATG	1 cut(s)	891
BsrGI	TGTACA	1 cut(s)	1815
BsrI	ACTGG	7 cut(s)	286, 483, 733, 954, 1021, 1522, 1638
BssMI	GATC	5 cut(s)	284, 430, 853, 1219, 1729
BssNI	GRCGYC	2 cut(s)	135, 191
Bst2UI	CCWGG	2 cut(s)	83, 703
Bst4CI	ACNGT	3 cut(s)	1069, 1348, 1815
Bst6I	CTCTTC	3 cut(s)	111, 267, 992
BstACI	GRCGYC	2 cut(s)	135, 191
BstAUI	TGTACA	1 cut(s)	1815
BstC8I	GCNNGC	1 cut(s)	1468
BstF5I	GGATG	4 cut(s)	181, 650, 1762, 1860
BstFNI	CGCG	3 cut(s)	249, 267, 1798
BstHHI	GCGC	3 cut(s)	1491, 1800, 1860
BstKTI	GATC	5 cut(s)	287, 433, 856, 1222, 1732
BstMAI	GTCTC	5 cut(s)	27, 59, 142, 651, 1457
BstMBI	GATC	5 cut(s)	284, 430, 853, 1219, 1729
BstMWI	GCNNNNNNNGC	2 cut(s)	307, 1438
BstNI	CCWGG	2 cut(s)	83, 703
BstNSI	RCATGY	2 cut(s)	1528, 1558
BstSCI	CCNGG	2 cut(s)	81, 701
BstSFI	CTRYAG	2 cut(s)	595, 1599
BstUI	CGCG	3 cut(s)	249, 267, 1798
BstV1I	GCAGC	3 cut(s)	134, 1599, 1602
BstX2I	RGATCY	3 cut(s)	284, 1219, 1729
BstYI	RGATCY	3 cut(s)	284, 1219, 1729
Bsu36I	CCTNAGG	1 cut(s)	1774
BsuI	GTATCC	1 cut(s)	920
BsuRI	GGCC	5 cut(s)	44, 525, 642, 789, 1020
BtsCI	GGATG	4 cut(s)	181, 650, 1762, 1860
BtsIMutI	CAGTG	4 cut(s)	440, 947, 1065, 1631
Cac8I	GCNNGC	1 cut(s)	1468
CciI	TCATGA	1 cut(s)	1078
CfoI	GCGC	3 cut(s)	1491, 1800, 1860
Cfr13I	GGNCC	2 cut(s)	43, 641
CseI	GACGC	1 cut(s)	180
Csp6I	GTAC	3 cut(s)	827, 1816, 1825
CviQI	GTAC	3 cut(s)	827, 1816, 1825
DpnI	GATC	5 cut(s)	286, 432, 855, 1221, 1731
DpnII	GATC	5 cut(s)	284, 430, 853, 1219, 1729
DraI	TTTAAA	1 cut(s)	1093
DraIII	CACNNNGTG	3 cut(s)	1166, 1271, 1637
EaeI	YGGCCR	2 cut(s)	523, 1018
Eam1104I	CTCTTC	3 cut(s)	111, 267, 992
EarI	CTCTTC	3 cut(s)	111, 267, 992
Eco31I	GGTCTC	2 cut(s)	27, 59
Eco32I	GATATC	1 cut(s)	1354
Eco57I	CTGAAG	2 cut(s)	1016, 1524
Eco81I	CCTNAGG	1 cut(s)	1774
Eco88I	CYCGRG	2 cut(s)	95, 654
EcoO109I	RGGNCCY	1 cut(s)	641
EcoRI	GAATTC	1 cut(s)	270
EcoRII	CCWGG	2 cut(s)	81, 701
EcoRV	GATATC	1 cut(s)	1354
Esp3I	CGTCTC	2 cut(s)	142, 1457
FalI	AAGNNNNNCTT	2 cut(s)	246, 278
FaqI	GGGAC	1 cut(s)	1222
FblI	GTMKAC	1 cut(s)	1842
Fnu4HI	GCNGC	4 cut(s)	123, 420, 1613, 1616
FokI	GGATG	4 cut(s)	188, 637, 1769, 1867
Fsp4HI	GCNGC	4 cut(s)	123, 420, 1613, 1616
FspBI	CTAG	3 cut(s)	638, 1163, 1751
FspI	TGCGCA	1 cut(s)	1490
GlaI	GCGC	3 cut(s)	1490, 1799, 1859
GluI	GCNGC	4 cut(s)	123, 420, 1613, 1616
GsaI	CCCAGC	1 cut(s)	49
GsuI	CTGGAG	2 cut(s)	206, 323
HaeIII	GGCC	5 cut(s)	44, 525, 642, 789, 1020
HapII	CCGG	3 cut(s)	66, 275, 443
HgaI	GACGC	1 cut(s)	180
HhaI	GCGC	3 cut(s)	1491, 1800, 1860
Hin1I	GRCGYC	2 cut(s)	135, 191
Hin6I	GCGC	3 cut(s)	1489, 1798, 1858
HinP1I	GCGC	3 cut(s)	1489, 1798, 1858
HincII	GTYRAC	1 cut(s)	1843
HindII	GTYRAC	1 cut(s)	1843
HinfI	GANTC	6 cut(s)	98, 182, 320, 563, 1277, 1849
HpaII	CCGG	3 cut(s)	66, 275, 443
HphI	GGTGA	4 cut(s)	494, 1178, 1397, 1649
Hpy166II	GTNNAC	3 cut(s)	592, 1834, 1843
Hpy188III	TCNNGA	7 cut(s)	223, 317, 560, 654, 1079, 1377, 1888
Hpy8I	GTNNAC	3 cut(s)	592, 1834, 1843
Hpy99I	CGWCG	1 cut(s)	137
HpyAV	CCTTC	6 cut(s)	153, 286, 358, 365, 779, 1682
HpyCH4III	ACNGT	3 cut(s)	1069, 1348, 1815
HpyCH4IV	ACGT	1 cut(s)	135
HpyF10VI	GCNNNNNNNGC	2 cut(s)	307, 1438
HpySE526I	ACGT	1 cut(s)	135
Hsp92I	GRCGYC	2 cut(s)	135, 191
HspAI	GCGC	3 cut(s)	1489, 1798, 1858
Kzo9I	GATC	5 cut(s)	284, 430, 853, 1219, 1729
LguI	GCTCTTC	1 cut(s)	111
LmnI	GCTCC	3 cut(s)	225, 1501, 1513
Lsp1109I	GCAGC	3 cut(s)	134, 1599, 1602
LweI	GCATC	5 cut(s)	337, 487, 1382, 1660, 1845
MaeI	CTAG	3 cut(s)	638, 1163, 1751
MaeII	ACGT	1 cut(s)	135
MaeIII	GTNAC	6 cut(s)	397, 633, 1513, 1520, 1637, 1746
MalI	GATC	5 cut(s)	286, 432, 855, 1221, 1731
MbiI	CCGCTC	1 cut(s)	104
MboI	GATC	5 cut(s)	284, 430, 853, 1219, 1729
MboII	GAAGA	6 cut(s)	98, 254, 380, 403, 1009, 1587
MfeI	CAATTG	1 cut(s)	38
MflI	RGATCY	3 cut(s)	284, 1219, 1729
MlsI	TGGCCA	2 cut(s)	525, 1020
MluNI	TGGCCA	2 cut(s)	525, 1020
MlyI	GAGTC	1 cut(s)	107
MmeI	TCCRAC	2 cut(s)	408, 1125
Mox20I	TGGCCA	2 cut(s)	525, 1020
MscI	TGGCCA	2 cut(s)	525, 1020
MseI	TTAA	3 cut(s)	1049, 1092, 1655
MslI	CAYNNNNRTG	2 cut(s)	465, 896
Msp20I	TGGCCA	2 cut(s)	525, 1020
MspA1I	CMGCKG	4 cut(s)	777, 797, 1251, 1604
MspI	CCGG	3 cut(s)	66, 275, 443
MspR9I	CCNGG	2 cut(s)	83, 703
MunI	CAATTG	1 cut(s)	38
Mva1269I	GAATGC	2 cut(s)	1333, 1434
MvaI	CCWGG	2 cut(s)	83, 703
MvnI	CGCG	3 cut(s)	249, 267, 1798
MwoI	GCNNNNNNNGC	2 cut(s)	307, 1438
NdeII	GATC	5 cut(s)	284, 430, 853, 1219, 1729
NlaIV	GGNNCC	5 cut(s)	70, 286, 1221, 1273, 1770
NmuCI	GTSAC	2 cut(s)	1637, 1746
NsbI	TGCGCA	1 cut(s)	1490
NspI	RCATGY	2 cut(s)	1528, 1558
PaeR7I	CTCGAG	1 cut(s)	95
PagI	TCATGA	1 cut(s)	1078
PciI	ACATGT	2 cut(s)	1524, 1554
PciSI	GCTCTTC	1 cut(s)	111
PcsI	WCGNNNNNNNCGW	1 cut(s)	870
PctI	GAATGC	2 cut(s)	1333, 1434
PfeI	GAWTC	5 cut(s)	182, 320, 563, 1277, 1849
PkrI	GCNGC	4 cut(s)	124, 421, 1614, 1617
PleI	GAGTC	1 cut(s)	106
PpsI	GAGTC	1 cut(s)	106
PscI	ACATGT	2 cut(s)	1524, 1554
PsiI	TTATAA	1 cut(s)	987
Psp6I	CCWGG	2 cut(s)	81, 701
PspFI	CCCAGC	1 cut(s)	45
PspGI	CCWGG	2 cut(s)	81, 701
PspN4I	GGNNCC	5 cut(s)	70, 286, 1221, 1273, 1770
PspPI	GGNCC	2 cut(s)	43, 641
PspXI	VCTCGAGB	1 cut(s)	95
PsuI	RGATCY	3 cut(s)	284, 1219, 1729
PvuII	CAGCTG	2 cut(s)	797, 1604
RsaI	GTAC	3 cut(s)	828, 1817, 1826
RsaNI	GTAC	3 cut(s)	827, 1816, 1825
RseI	CAYNNNNRTG	2 cut(s)	465, 896
SalI	GTCGAC	1 cut(s)	1841
SapI	GCTCTTC	1 cut(s)	111
SaqAI	TTAA	3 cut(s)	1049, 1092, 1655
SatI	GCNGC	4 cut(s)	123, 420, 1613, 1616
Sau3AI	GATC	5 cut(s)	284, 430, 853, 1219, 1729
Sau96I	GGNCC	2 cut(s)	43, 641
SchI	GAGTC	1 cut(s)	107
ScrFI	CCNGG	2 cut(s)	83, 703
SfaNI	GCATC	5 cut(s)	337, 487, 1382, 1660, 1845
SfcI	CTRYAG	2 cut(s)	595, 1599
Sfr274I	CTCGAG	1 cut(s)	95
SlaI	CTCGAG	1 cut(s)	95
SmiMI	CAYNNNNRTG	2 cut(s)	465, 896
SmlI	CTYRAG	2 cut(s)	95, 1479
SmoI	CTYRAG	2 cut(s)	95, 1479
SsiI	CCGC	8 cut(s)	102, 120, 247, 267, 419, 777, 1249, 1796
SspMI	CTAG	3 cut(s)	638, 1163, 1751
StyD4I	CCNGG	2 cut(s)	81, 701
TaaI	ACNGT	3 cut(s)	1069, 1348, 1815
TaiI	ACGT	1 cut(s)	138
TaqI	TCGA	4 cut(s)	89, 96, 669, 1842
TatI	WGTACW	2 cut(s)	1815, 1824
TauI	GCSGC	1 cut(s)	422
TfiI	GAWTC	5 cut(s)	182, 320, 563, 1277, 1849
Tru1I	TTAA	3 cut(s)	1049, 1092, 1655
Tru9I	TTAA	3 cut(s)	1049, 1092, 1655
TscAI	CASTG	4 cut(s)	440, 954, 1072, 1638
TseFI	GTSAC	2 cut(s)	1637, 1746
TseI	GCWGC	3 cut(s)	122, 1612, 1615
Tsp45I	GTSAC	2 cut(s)	1637, 1746
TspDTI	ATGAA	5 cut(s)	245, 574, 917, 1299, 1433
TspGWI	ACGGA	1 cut(s)	1358
TspRI	CASTG	4 cut(s)	440, 954, 1072, 1638
XapI	RAATTY	5 cut(s)	270, 674, 686, 1286, 1876
XceI	RCATGY	2 cut(s)	1528, 1558
XcmI	CCANNNNNNNNNTGG	2 cut(s)	79, 518
XhoI	CTCGAG	1 cut(s)	95
XmiI	GTMKAC	1 cut(s)	1842
XspI	CTAG	3 cut(s)	638, 1163, 1751
ZraI	GACGTC	1 cut(s)	136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.